Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051911.t1 | XP_013450280.1 | 97.1 | 407 | 12 | 0 | 1 | 407 | 1 | 407 | 1.00E-220 | 775.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051911.t1 | Q9SF09 | 63.7 | 421 | 138 | 3 | 2 | 407 | 12 | 432 | 1.3e-152 | 540.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051911.t1 | A0A072U589 | 97.1 | 407 | 12 | 0 | 1 | 407 | 1 | 407 | 7.2e-221 | 775.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051911 | MS.gene07878 | 0.800293 | 1.54E-48 | -1.69E-46 |
| MS.gene051911 | MS.gene42653 | 0.80174 | 7.81E-49 | -1.69E-46 |
| MS.gene051911 | MS.gene43424 | 0.803936 | 2.75E-49 | -1.69E-46 |
| MS.gene051911 | MS.gene57783 | 0.803124 | 4.05E-49 | -1.69E-46 |
| MS.gene051911 | MS.gene57980 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene051911 | MS.gene59697 | 0.801832 | 7.48E-49 | -1.69E-46 |
| MS.gene051911 | MS.gene68654 | 0.800941 | 1.14E-48 | -1.69E-46 |
| MS.gene051911 | MS.gene92256 | 0.812046 | 5.16E-51 | -1.69E-46 |
| MS.gene051911 | MS.gene95204 | 0.801677 | 8.04E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64892 | MS.gene051911 | PPI |
| MS.gene72660 | MS.gene051911 | PPI |
| MS.gene051911 | MS.gene86543 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051911.t1 | MTR_7g107090 | 97.052 | 407 | 12 | 0 | 1 | 407 | 1 | 407 | 0.0 | 801 |
| MS.gene051911.t1 | MTR_5g024300 | 37.198 | 414 | 230 | 7 | 3 | 404 | 19 | 414 | 1.30e-74 | 239 |
| MS.gene051911.t1 | MTR_8g073340 | 37.440 | 414 | 232 | 5 | 4 | 407 | 12 | 408 | 2.79e-73 | 235 |
| MS.gene051911.t1 | MTR_8g467180 | 27.842 | 431 | 259 | 13 | 1 | 407 | 1 | 403 | 7.82e-35 | 133 |
| MS.gene051911.t1 | MTR_8g467190 | 26.241 | 423 | 275 | 11 | 1 | 407 | 1 | 402 | 3.58e-32 | 126 |
| MS.gene051911.t1 | MTR_7g010790 | 25.829 | 422 | 277 | 11 | 2 | 407 | 26 | 427 | 4.26e-31 | 123 |
| MS.gene051911.t1 | MTR_1g094620 | 28.640 | 419 | 261 | 13 | 1 | 407 | 143 | 535 | 1.56e-30 | 123 |
| MS.gene051911.t1 | MTR_7g010750 | 25.118 | 422 | 281 | 11 | 1 | 407 | 25 | 426 | 7.56e-30 | 120 |
| MS.gene051911.t1 | MTR_1g094620 | 27.594 | 424 | 266 | 13 | 1 | 407 | 143 | 542 | 9.36e-30 | 121 |
| MS.gene051911.t1 | MTR_3g033730 | 25.862 | 406 | 270 | 10 | 13 | 407 | 42 | 427 | 2.57e-26 | 110 |
| MS.gene051911.t1 | MTR_3g465440 | 23.892 | 406 | 275 | 10 | 12 | 404 | 47 | 431 | 6.24e-26 | 110 |
| MS.gene051911.t1 | MTR_3g465510 | 25.121 | 414 | 281 | 9 | 4 | 407 | 33 | 427 | 1.59e-25 | 107 |
| MS.gene051911.t1 | MTR_8g465310 | 24.557 | 395 | 267 | 8 | 17 | 401 | 23 | 396 | 3.45e-25 | 106 |
| MS.gene051911.t1 | MTR_1g050328 | 29.167 | 264 | 168 | 6 | 17 | 272 | 157 | 409 | 3.67e-23 | 100 |
| MS.gene051911.t1 | MTR_8g467070 | 29.699 | 266 | 167 | 6 | 16 | 273 | 23 | 276 | 4.51e-22 | 97.8 |
| MS.gene051911.t1 | MTR_7g089910 | 26.847 | 406 | 237 | 12 | 17 | 407 | 146 | 506 | 2.15e-21 | 96.3 |
| MS.gene051911.t1 | MTR_7g062430 | 26.799 | 403 | 249 | 13 | 3 | 381 | 133 | 513 | 6.28e-18 | 86.3 |
| MS.gene051911.t1 | MTR_4g037690 | 26.621 | 293 | 187 | 8 | 14 | 296 | 135 | 409 | 1.28e-17 | 84.7 |
| MS.gene051911.t1 | MTR_7g062410 | 25.127 | 394 | 256 | 12 | 6 | 381 | 24 | 396 | 3.11e-16 | 80.5 |
| MS.gene051911.t1 | MTR_7g089920 | 27.715 | 267 | 169 | 8 | 17 | 273 | 146 | 398 | 1.07e-15 | 79.0 |
| MS.gene051911.t1 | MTR_8g080120 | 20.241 | 415 | 300 | 10 | 1 | 397 | 14 | 415 | 1.40e-15 | 78.6 |
| MS.gene051911.t1 | MTR_3g084960 | 25.679 | 405 | 269 | 11 | 9 | 400 | 74 | 459 | 1.55e-15 | 78.6 |
| MS.gene051911.t1 | MTR_3g005740 | 22.947 | 414 | 284 | 12 | 6 | 397 | 48 | 448 | 1.95e-15 | 78.2 |
| MS.gene051911.t1 | MTR_1g070470 | 23.596 | 356 | 239 | 13 | 34 | 371 | 47 | 387 | 2.48e-14 | 74.7 |
| MS.gene051911.t1 | MTR_6g022780 | 22.549 | 408 | 286 | 10 | 4 | 393 | 8 | 403 | 1.20e-13 | 72.4 |
| MS.gene051911.t1 | MTR_2g096830 | 21.951 | 410 | 290 | 10 | 2 | 393 | 6 | 403 | 5.26e-13 | 70.5 |
| MS.gene051911.t1 | MTR_6g023075 | 22.628 | 411 | 286 | 11 | 2 | 393 | 6 | 403 | 1.03e-12 | 69.7 |
| MS.gene051911.t1 | MTR_6g023065 | 21.519 | 316 | 228 | 7 | 6 | 306 | 46 | 356 | 1.49e-12 | 69.3 |
| MS.gene051911.t1 | MTR_2g096830 | 21.098 | 346 | 249 | 8 | 2 | 332 | 6 | 342 | 4.34e-12 | 67.4 |
| MS.gene051911.t1 | MTR_6g022790 | 21.392 | 388 | 280 | 9 | 1 | 373 | 33 | 410 | 1.99e-11 | 65.9 |
| MS.gene051911.t1 | MTR_2g101920 | 21.628 | 393 | 274 | 12 | 1 | 373 | 38 | 416 | 2.85e-11 | 65.5 |
| MS.gene051911.t1 | MTR_4g055610 | 24.745 | 392 | 252 | 16 | 21 | 383 | 51 | 428 | 4.80e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051911.t1 | AT3G11900 | 63.658 | 421 | 138 | 3 | 2 | 407 | 12 | 432 | 0.0 | 545 |
| MS.gene051911.t1 | AT3G11900 | 63.658 | 421 | 138 | 3 | 2 | 407 | 12 | 432 | 0.0 | 545 |
| MS.gene051911.t1 | AT4G38250 | 37.324 | 426 | 224 | 8 | 3 | 404 | 22 | 428 | 1.03e-83 | 263 |
| MS.gene051911.t1 | AT2G42005 | 37.410 | 417 | 226 | 7 | 3 | 404 | 11 | 407 | 7.39e-81 | 254 |
| MS.gene051911.t1 | AT5G65990 | 36.893 | 412 | 231 | 7 | 3 | 404 | 27 | 419 | 3.68e-70 | 227 |
| MS.gene051911.t1 | AT5G15240 | 24.289 | 387 | 265 | 8 | 28 | 404 | 48 | 416 | 8.15e-30 | 120 |
| MS.gene051911.t1 | AT2G39130 | 25.908 | 413 | 276 | 11 | 1 | 404 | 150 | 541 | 9.85e-28 | 115 |
| MS.gene051911.t1 | AT2G39130 | 25.908 | 413 | 276 | 11 | 1 | 404 | 150 | 541 | 9.85e-28 | 115 |
| MS.gene051911.t1 | AT5G02180 | 26.150 | 413 | 272 | 11 | 4 | 404 | 150 | 541 | 6.46e-26 | 110 |
| MS.gene051911.t1 | AT5G02180 | 26.150 | 413 | 272 | 11 | 4 | 404 | 150 | 541 | 6.46e-26 | 110 |
| MS.gene051911.t1 | AT3G09330 | 27.182 | 401 | 257 | 14 | 17 | 404 | 138 | 516 | 3.30e-24 | 105 |
| MS.gene051911.t1 | AT3G09340 | 26.933 | 401 | 258 | 13 | 17 | 404 | 138 | 516 | 4.25e-24 | 104 |
| MS.gene051911.t1 | AT2G41190 | 23.645 | 406 | 276 | 10 | 14 | 407 | 148 | 531 | 1.60e-23 | 102 |
| MS.gene051911.t1 | AT5G15240 | 23.529 | 340 | 237 | 6 | 75 | 404 | 4 | 330 | 1.38e-22 | 98.2 |
| MS.gene051911.t1 | AT3G54830 | 26.703 | 367 | 234 | 10 | 10 | 360 | 147 | 494 | 9.11e-22 | 97.8 |
| MS.gene051911.t1 | AT3G54830 | 26.703 | 367 | 234 | 10 | 10 | 360 | 147 | 494 | 9.11e-22 | 97.8 |
| MS.gene051911.t1 | AT2G39130 | 28.315 | 279 | 178 | 8 | 3 | 273 | 152 | 416 | 1.07e-21 | 97.4 |
| MS.gene051911.t1 | AT3G28960 | 22.683 | 410 | 266 | 11 | 13 | 401 | 16 | 395 | 2.35e-21 | 95.5 |
| MS.gene051911.t1 | AT3G28960 | 22.683 | 410 | 266 | 11 | 13 | 401 | 16 | 395 | 2.35e-21 | 95.5 |
| MS.gene051911.t1 | AT3G28960 | 22.683 | 410 | 266 | 11 | 13 | 401 | 16 | 395 | 2.35e-21 | 95.5 |
| MS.gene051911.t1 | AT3G28960 | 22.683 | 410 | 266 | 11 | 13 | 401 | 16 | 395 | 2.35e-21 | 95.5 |
| MS.gene051911.t1 | AT5G02170 | 26.131 | 398 | 266 | 12 | 17 | 404 | 139 | 518 | 4.67e-21 | 95.5 |
| MS.gene051911.t1 | AT5G16740 | 23.373 | 415 | 287 | 10 | 2 | 403 | 16 | 412 | 3.21e-20 | 92.4 |
| MS.gene051911.t1 | AT3G28960 | 24.269 | 342 | 215 | 8 | 81 | 401 | 8 | 326 | 4.92e-18 | 85.1 |
| MS.gene051911.t1 | AT2G41190 | 24.252 | 301 | 203 | 8 | 14 | 303 | 148 | 434 | 7.16e-16 | 79.7 |
| MS.gene051911.t1 | AT5G02170 | 24.731 | 372 | 239 | 12 | 17 | 386 | 139 | 471 | 9.20e-16 | 79.3 |
| MS.gene051911.t1 | AT1G24400 | 21.111 | 360 | 255 | 10 | 1 | 343 | 19 | 366 | 2.31e-12 | 68.6 |
| MS.gene051911.t1 | AT5G40780 | 21.531 | 418 | 281 | 16 | 6 | 397 | 29 | 425 | 7.29e-12 | 67.4 |
| MS.gene051911.t1 | AT1G48640 | 22.943 | 401 | 279 | 10 | 1 | 382 | 31 | 420 | 1.44e-11 | 66.2 |
| MS.gene051911.t1 | AT1G61270 | 20.286 | 419 | 289 | 14 | 1 | 393 | 24 | 423 | 1.84e-11 | 65.9 |
| MS.gene051911.t1 | AT3G30390 | 22.656 | 384 | 246 | 9 | 21 | 371 | 51 | 416 | 9.09e-11 | 63.9 |
| MS.gene051911.t1 | AT3G30390 | 22.656 | 384 | 246 | 9 | 21 | 371 | 51 | 416 | 9.09e-11 | 63.9 |
| MS.gene051911.t1 | AT3G30390 | 22.656 | 384 | 246 | 9 | 21 | 371 | 51 | 416 | 9.09e-11 | 63.9 |
Find 93 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTACAATCTCATTAAT+TGG | 0.119192 | 7.1:+6072446 | None:intergenic |
| ACATTTCACCTAAAATTATT+TGG | 0.180848 | 7.1:-6072236 | MS.gene051911:CDS |
| AAAGTCTGAGCCAGCAATTT+TGG | 0.194534 | 7.1:+6073364 | None:intergenic |
| CGGATTGCTGGTTGGGTTGC+TGG | 0.195646 | 7.1:-6074543 | MS.gene051911:CDS |
| ATGCTAGTACCAGTTGAAAT+TGG | 0.202789 | 7.1:-6073646 | MS.gene051911:CDS |
| TTGAAGCTTTGAAGCTCTTT+TGG | 0.211711 | 7.1:+6074629 | None:intergenic |
| ACCAGCTCCTAGGGAGATTA+AGG | 0.232883 | 7.1:+6073260 | None:intergenic |
| GCTTCATTTGTGCCAGAATT+TGG | 0.237616 | 7.1:-6072320 | MS.gene051911:CDS |
| GTTGCGTATTTGGTATTTAT+TGG | 0.257482 | 7.1:-6073727 | MS.gene051911:CDS |
| TGCAGGATCTGTTGCGTATT+TGG | 0.266618 | 7.1:-6073737 | MS.gene051911:CDS |
| GCTTCAAAGCTTCAAACTTT+GGG | 0.276040 | 7.1:-6074621 | MS.gene051911:CDS |
| TGTAGTTGGAACTGGTGTTT+TGG | 0.282817 | 7.1:-6074583 | MS.gene051911:CDS |
| TTGCGTATTTGGTATTTATT+GGG | 0.311051 | 7.1:-6073726 | MS.gene051911:CDS |
| AGCTTCAAAGCTTCAAACTT+TGG | 0.322711 | 7.1:-6074622 | MS.gene051911:CDS |
| CGGCAATCACGTCGAACATT+GGG | 0.331674 | 7.1:-6073483 | MS.gene051911:CDS |
| AATATCATTGTTACTGTAGT+TGG | 0.346950 | 7.1:-6074597 | MS.gene051911:CDS |
| TTATGTGGTTACATGGCTTT+TGG | 0.362879 | 7.1:-6073307 | MS.gene051911:CDS |
| AAGTAGGAGCATGCAATAAT+AGG | 0.366520 | 7.1:+6074488 | None:intergenic |
| CTTCTACAATCTCATTAATT+GGG | 0.367121 | 7.1:+6072447 | None:intergenic |
| AAACGAAAACCCATCCTCTA+AGG | 0.374336 | 7.1:+6073516 | None:intergenic |
| AGCTAAATTCCCAAAATTGC+TGG | 0.379222 | 7.1:-6073374 | MS.gene051911:CDS |
| TGCTATTGTGGTGGTTGTGC+TGG | 0.379392 | 7.1:-6072351 | MS.gene051911:CDS |
| GGAACTTACAACACAATTGT+TGG | 0.382897 | 7.1:-6072140 | MS.gene051911:CDS |
| TTCTCTATGCCTCTGGCAAA+AGG | 0.387302 | 7.1:-6072210 | MS.gene051911:CDS |
| TTGGCTCTTCTCTATGCCTC+TGG | 0.390599 | 7.1:-6072217 | MS.gene051911:CDS |
| TGCTAGTACCAGTTGAAATT+GGG | 0.393945 | 7.1:-6073645 | MS.gene051911:CDS |
| GACCTGGGTTATAGATGCTT+TGG | 0.394530 | 7.1:-6073808 | MS.gene051911:CDS |
| TTAATTGGGTGTAACATGAT+TGG | 0.395355 | 7.1:+6072461 | None:intergenic |
| CCAATTAATGAGATTGTAGA+AGG | 0.404740 | 7.1:-6072446 | MS.gene051911:CDS |
| GAGGCAAATACACCAAATTC+TGG | 0.406786 | 7.1:+6072308 | None:intergenic |
| TTAGTGGAATCAAGATCTTA+TGG | 0.409655 | 7.1:-6073832 | MS.gene051911:CDS |
| GTTGCCATTTGCAGCAGGCA+TGG | 0.411945 | 7.1:-6073458 | MS.gene051911:CDS |
| CTGGTCATCTCTTGCCGTAC+AGG | 0.421828 | 7.1:-6073242 | MS.gene051911:intron |
| TATCCTTCATAGAATTCTCT+AGG | 0.427773 | 7.1:+6073398 | None:intergenic |
| TATAGATGCTTTGGAACATT+CGG | 0.429944 | 7.1:-6073799 | MS.gene051911:CDS |
| TAATTGGGTGTAACATGATT+GGG | 0.432015 | 7.1:+6072462 | None:intergenic |
| GGTGTATTTGCCTCATTTGT+GGG | 0.432173 | 7.1:-6072299 | MS.gene051911:CDS |
| ACAGCCATGCCTGCTGCAAA+TGG | 0.444083 | 7.1:+6073454 | None:intergenic |
| TGGTGTATTTGCCTCATTTG+TGG | 0.444849 | 7.1:-6072300 | MS.gene051911:CDS |
| TCGCTTTGTGTTGCTATCGT+TGG | 0.451154 | 7.1:-6074519 | MS.gene051911:CDS |
| ATTGTTACTGTAGTTGGAAC+TGG | 0.462436 | 7.1:-6074591 | MS.gene051911:CDS |
| ATTAAGGGTCACAATGTCTC+TGG | 0.463981 | 7.1:+6073276 | None:intergenic |
| CATGACATCCCAATTTCAAC+TGG | 0.479088 | 7.1:+6073637 | None:intergenic |
| AGATGTACGAGTGGCCTTAG+AGG | 0.486364 | 7.1:-6073530 | MS.gene051911:CDS |
| CCAGCTCCTAGGGAGATTAA+GGG | 0.501513 | 7.1:+6073261 | None:intergenic |
| GCAAGAGATGACCAGCTCCT+AGG | 0.507015 | 7.1:+6073250 | None:intergenic |
| GGTTTGGTGCAGAGATAAGT+TGG | 0.507286 | 7.1:-6073869 | MS.gene051911:CDS |
| TACGAGTGGCCTTAGAGGAT+GGG | 0.517363 | 7.1:-6073525 | MS.gene051911:CDS |
| CAGTTGAAATTGGGATGTCA+TGG | 0.517566 | 7.1:-6073636 | MS.gene051911:CDS |
| ACGGCAATCACGTCGAACAT+TGG | 0.520931 | 7.1:-6073484 | MS.gene051911:CDS |
| CCCTTAATCTCCCTAGGAGC+TGG | 0.522429 | 7.1:-6073261 | MS.gene051911:CDS |
| CTTCAAAGCTTCAAACTTTG+GGG | 0.529013 | 7.1:-6074620 | MS.gene051911:CDS |
| CAAGAGATGACCAGCTCCTA+GGG | 0.531338 | 7.1:+6073251 | None:intergenic |
| ATCAAGATCTTATGGAGACC+TGG | 0.532309 | 7.1:-6073824 | MS.gene051911:CDS |
| GTACGAGTGGCCTTAGAGGA+TGG | 0.538625 | 7.1:-6073526 | MS.gene051911:CDS |
| GGCATCAGAAGAGCCGTTAG+TGG | 0.542217 | 7.1:-6073848 | MS.gene051911:CDS |
| TGCCCTAGAGAATTCTATGA+AGG | 0.544325 | 7.1:-6073401 | MS.gene051911:CDS |
| TATGAATGTCTTTACCTGTA+CGG | 0.553018 | 7.1:+6073228 | None:intergenic |
| ACCAGCAATCCGAAAAGCAA+AGG | 0.553289 | 7.1:+6074554 | None:intergenic |
| TGGTACTAGCATAAATATGT+AGG | 0.553563 | 7.1:+6073657 | None:intergenic |
| ATACATCAGTCGTGCTATTG+TGG | 0.553742 | 7.1:-6072363 | MS.gene051911:CDS |
| TTATAAATTCTGTCAGATAC+CGG | 0.554125 | 7.1:+6073776 | None:intergenic |
| AAAAGAAAGCATTGCACACA+AGG | 0.559468 | 7.1:+6072271 | None:intergenic |
| ATGACAGGTAGGATTGTGCC+TGG | 0.559822 | 7.1:-6072501 | MS.gene051911:intron |
| TTCCAAAGCATCTATAACCC+AGG | 0.563102 | 7.1:+6073806 | None:intergenic |
| CCAGCAATCCGAAAAGCAAA+GGG | 0.563950 | 7.1:+6074555 | None:intergenic |
| ATCCTTCATAGAATTCTCTA+GGG | 0.566292 | 7.1:+6073399 | None:intergenic |
| TGTGTGCAATGTCCTAGCTA+TGG | 0.568520 | 7.1:-6073569 | MS.gene051911:CDS |
| GATTATATTGTATTAATCAG+TGG | 0.569319 | 7.1:-6072182 | MS.gene051911:CDS |
| TAAGATCTTGATTCCACTAA+CGG | 0.573803 | 7.1:+6073835 | None:intergenic |
| GACAGGTAGGATTGTGCCTG+GGG | 0.581164 | 7.1:-6072499 | MS.gene051911:intron |
| CAAGGTACTCCCCACAAATG+AGG | 0.581605 | 7.1:+6072289 | None:intergenic |
| TGATTAATACAATATAATCA+AGG | 0.583002 | 7.1:+6072186 | None:intergenic |
| ATCGTGGTAGCACAATGTGC+AGG | 0.583248 | 7.1:-6073754 | MS.gene051911:CDS |
| GAAATTGGGATGTCATGGAT+AGG | 0.588699 | 7.1:-6073631 | MS.gene051911:CDS |
| AGCTATGGGAATTGTAGTGA+AGG | 0.588848 | 7.1:-6073554 | MS.gene051911:CDS |
| GTGTATTTGCCTCATTTGTG+GGG | 0.590797 | 7.1:-6072298 | MS.gene051911:CDS |
| TCAAGATCTTATGGAGACCT+GGG | 0.593639 | 7.1:-6073823 | MS.gene051911:CDS |
| TTGTGACCCTTAATCTCCCT+AGG | 0.597351 | 7.1:-6073267 | MS.gene051911:CDS |
| TGACAGGTAGGATTGTGCCT+GGG | 0.602408 | 7.1:-6072500 | MS.gene051911:intron |
| GATGCTTTGGAACATTCGGC+CGG | 0.602453 | 7.1:-6073795 | MS.gene051911:CDS |
| TCACTACAATTCCCATAGCT+AGG | 0.603325 | 7.1:+6073557 | None:intergenic |
| GGCAATCACGTCGAACATTG+GGG | 0.609772 | 7.1:-6073482 | MS.gene051911:CDS |
| GGAATGTGAACATAAGCCCC+AGG | 0.620030 | 7.1:+6072483 | None:intergenic |
| TCTGACAGAATTTATAATCG+TGG | 0.625652 | 7.1:-6073770 | MS.gene051911:CDS |
| AATAATGATTCAATAAGACT+AGG | 0.630124 | 7.1:-6072398 | MS.gene051911:CDS |
| TACTAGCATAAATATGTAGG+AGG | 0.630914 | 7.1:+6073660 | None:intergenic |
| GTGTGCAATGTCCTAGCTAT+GGG | 0.634606 | 7.1:-6073568 | MS.gene051911:CDS |
| AATATGTAGGAGGCAAGCGA+TGG | 0.653012 | 7.1:+6073670 | None:intergenic |
| CAATCACGTCGAACATTGGG+GGG | 0.667136 | 7.1:-6073480 | MS.gene051911:CDS |
| CATCAGTCGTGCTATTGTGG+TGG | 0.682697 | 7.1:-6072360 | MS.gene051911:CDS |
| AGTGAAGGAAGATGTACGAG+TGG | 0.702478 | 7.1:-6073539 | MS.gene051911:CDS |
| GCAATCACGTCGAACATTGG+GGG | 0.711818 | 7.1:-6073481 | MS.gene051911:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTAGTAAAAAAATAAAA+AGG | + | chr7.1:6072584-6072603 | None:intergenic | 10.0% |
| !! | TGATTAATACAATATAATCA+AGG | + | chr7.1:6074607-6074626 | None:intergenic | 15.0% |
| !!! | TACTACTATTCTTTTTTATT+GGG | - | chr7.1:6072595-6072614 | MS.gene051911:intron | 15.0% |
| !!! | TTACTACTATTCTTTTTTAT+TGG | - | chr7.1:6072594-6072613 | MS.gene051911:intron | 15.0% |
| !! | AATAATGATTCAATAAGACT+AGG | - | chr7.1:6074392-6074411 | MS.gene051911:intron | 20.0% |
| !! | ACATTTCACCTAAAATTATT+TGG | - | chr7.1:6074554-6074573 | MS.gene051911:CDS | 20.0% |
| !! | GATTATATTGTATTAATCAG+TGG | - | chr7.1:6074608-6074627 | MS.gene051911:CDS | 20.0% |
| !! | TAGATTATTCCATTACTAAA+AGG | - | chr7.1:6072658-6072677 | MS.gene051911:intron | 20.0% |
| !!! | AAATAATTTTAGGTGAAATG+TGG | + | chr7.1:6074555-6074574 | None:intergenic | 20.0% |
| !!! | AAATTGTTTCCTTTTAGTAA+TGG | + | chr7.1:6072670-6072689 | None:intergenic | 20.0% |
| !!! | AATTTCGTTATTTTTCCTAT+TGG | - | chr7.1:6074234-6074253 | MS.gene051911:intron | 20.0% |
| !!! | ACATTAACATCTCAAATTTT+AGG | - | chr7.1:6074142-6074161 | MS.gene051911:intron | 20.0% |
| !!! | ACTACTATTCTTTTTTATTG+GGG | - | chr7.1:6072596-6072615 | MS.gene051911:intron | 20.0% |
| !!! | CATTAACATCTCAAATTTTA+GGG | - | chr7.1:6074143-6074162 | MS.gene051911:intron | 20.0% |
| !!! | GGAAACAATTTAAAGTAATA+CGG | - | chr7.1:6072679-6072698 | MS.gene051911:intron | 20.0% |
| ! | AAATTTCCAATGCACATAAT+TGG | + | chr7.1:6074041-6074060 | None:intergenic | 25.0% |
| ! | AACAAAATATTATGAACTCC+TGG | + | chr7.1:6074205-6074224 | None:intergenic | 25.0% |
| ! | AATATCATTGTTACTGTAGT+TGG | - | chr7.1:6072193-6072212 | MS.gene051911:CDS | 25.0% |
| ! | CTTCTACAATCTCATTAATT+GGG | + | chr7.1:6074346-6074365 | None:intergenic | 25.0% |
| ! | GAAATCATTCTTCCTAAATT+CGG | - | chr7.1:6073861-6073880 | MS.gene051911:CDS | 25.0% |
| ! | GATTCTGTATTCCAAAAATA+TGG | - | chr7.1:6073096-6073115 | MS.gene051911:intron | 25.0% |
| ! | TATAACATTTGTGAAAGTAG+TGG | + | chr7.1:6072553-6072572 | None:intergenic | 25.0% |
| ! | TGGAATAATCTAATCTAAGT+CGG | + | chr7.1:6072650-6072669 | None:intergenic | 25.0% |
| ! | TTATAAATTCTGTCAGATAC+CGG | + | chr7.1:6073017-6073036 | None:intergenic | 25.0% |
| ! | TTGCGTATTTGGTATTTATT+GGG | - | chr7.1:6073064-6073083 | MS.gene051911:intron | 25.0% |
| ! | TTTATCCTTAGATATGTCTA+CGG | - | chr7.1:6074058-6074077 | MS.gene051911:intron | 25.0% |
| !!! | ATTTTTGGAATACAGAATCA+AGG | + | chr7.1:6073095-6073114 | None:intergenic | 25.0% |
| !!! | GATTTTGATTTCATTGATAC+AGG | - | chr7.1:6072900-6072919 | MS.gene051911:intron | 25.0% |
| !!! | GGATTATTTTTTGCTGTTTA+TGG | - | chr7.1:6074629-6074648 | MS.gene051911:CDS | 25.0% |
| ACATCAGCAAAAATGCTAAA+TGG | + | chr7.1:6073204-6073223 | None:intergenic | 30.0% | |
| AGCAGTATACTCAAATAACA+TGG | + | chr7.1:6073733-6073752 | None:intergenic | 30.0% | |
| ATCCTTCATAGAATTCTCTA+GGG | + | chr7.1:6073394-6073413 | None:intergenic | 30.0% | |
| ATGAGCATAGAATTTGATTC+AGG | - | chr7.1:6072423-6072442 | MS.gene051911:CDS | 30.0% | |
| ATTCAGGTAGGTTTCAATAT+TGG | - | chr7.1:6072439-6072458 | MS.gene051911:CDS | 30.0% | |
| CATGTAAAACAGATTAACTG+AGG | + | chr7.1:6073842-6073861 | None:intergenic | 30.0% | |
| CCAATTAATGAGATTGTAGA+AGG | - | chr7.1:6074344-6074363 | MS.gene051911:intron | 30.0% | |
| CCTTCTACAATCTCATTAAT+TGG | + | chr7.1:6074347-6074366 | None:intergenic | 30.0% | |
| GTGAAAGCAAAATATATGCA+TGG | + | chr7.1:6073598-6073617 | None:intergenic | 30.0% | |
| GTTGCGTATTTGGTATTTAT+TGG | - | chr7.1:6073063-6073082 | MS.gene051911:intron | 30.0% | |
| TAAGATCTTGATTCCACTAA+CGG | + | chr7.1:6072958-6072977 | None:intergenic | 30.0% | |
| TAATTGGGTGTAACATGATT+GGG | + | chr7.1:6074331-6074350 | None:intergenic | 30.0% | |
| TACTAGCATAAATATGTAGG+AGG | + | chr7.1:6073133-6073152 | None:intergenic | 30.0% | |
| TATCCTTCATAGAATTCTCT+AGG | + | chr7.1:6073395-6073414 | None:intergenic | 30.0% | |
| TATGAATGTCTTTACCTGTA+CGG | + | chr7.1:6073565-6073584 | None:intergenic | 30.0% | |
| TCTGACAGAATTTATAATCG+TGG | - | chr7.1:6073020-6073039 | MS.gene051911:intron | 30.0% | |
| TGATTTCATTGATACAGGTT+TGG | - | chr7.1:6072905-6072924 | MS.gene051911:intron | 30.0% | |
| TGGTACTAGCATAAATATGT+AGG | + | chr7.1:6073136-6073155 | None:intergenic | 30.0% | |
| TTAATTGGGTGTAACATGAT+TGG | + | chr7.1:6074332-6074351 | None:intergenic | 30.0% | |
| TTAGTGGAATCAAGATCTTA+TGG | - | chr7.1:6072958-6072977 | MS.gene051911:intron | 30.0% | |
| TTCATTATATGCAGGGAATT+CGG | - | chr7.1:6072852-6072871 | MS.gene051911:intron | 30.0% | |
| ! | AACTATATGGTCTTCACTTT+TGG | - | chr7.1:6073795-6073814 | MS.gene051911:CDS | 30.0% |
| ! | ACACTCGTATACATTCTTTT+TGG | - | chr7.1:6073459-6073478 | MS.gene051911:CDS | 30.0% |
| ! | ATGTTATTTGAGTATACTGC+TGG | - | chr7.1:6073732-6073751 | MS.gene051911:CDS | 30.0% |
| ! | CACTCGTATACATTCTTTTT+GGG | - | chr7.1:6073460-6073479 | MS.gene051911:CDS | 30.0% |
| ! | GAGAAGAGCCAAATAATTTT+AGG | + | chr7.1:6074565-6074584 | None:intergenic | 30.0% |
| ! | GTTTGGTTGCTTTAACTATA+TGG | - | chr7.1:6073782-6073801 | MS.gene051911:CDS | 30.0% |
| ! | TTTATATGATGATGACAGGT+AGG | - | chr7.1:6074278-6074297 | MS.gene051911:intron | 30.0% |
| ! | TTTGTTGTAGACATGTCTAA+AGG | + | chr7.1:6074113-6074132 | None:intergenic | 30.0% |
| !! | ACTATATGGTCTTCACTTTT+GGG | - | chr7.1:6073796-6073815 | MS.gene051911:CDS | 30.0% |
| !! | CTCTTTTGGAAGATAACAAA+GGG | + | chr7.1:6072150-6072169 | None:intergenic | 30.0% |
| !! | GCATTTTATATGATGATGAC+AGG | - | chr7.1:6074274-6074293 | MS.gene051911:intron | 30.0% |
| !! | TATAGATGCTTTGGAACATT+CGG | - | chr7.1:6072991-6073010 | MS.gene051911:intron | 30.0% |
| !! | TCTTTTGGAAGATAACAAAG+GGG | + | chr7.1:6072149-6072168 | None:intergenic | 30.0% |
| !!! | ATGGCTGTTTTTTGTTTTGA+GGG | - | chr7.1:6073351-6073370 | MS.gene051911:CDS | 30.0% |
| !!! | TACATTCTTTTTGGGTTATG+TGG | - | chr7.1:6073468-6073487 | MS.gene051911:CDS | 30.0% |
| AGCTAAATTCCCAAAATTGC+TGG | - | chr7.1:6073416-6073435 | MS.gene051911:CDS | 35.0% | |
| AGCTTCAAAGCTTCAAACTT+TGG | - | chr7.1:6072168-6072187 | MS.gene051911:CDS | 35.0% | |
| ATATTATGAACTCCTGGCAA+TGG | + | chr7.1:6074199-6074218 | None:intergenic | 35.0% | |
| ATGCTAGTACCAGTTGAAAT+TGG | - | chr7.1:6073144-6073163 | MS.gene051911:intron | 35.0% | |
| ATTGTTACTGTAGTTGGAAC+TGG | - | chr7.1:6072199-6072218 | MS.gene051911:CDS | 35.0% | |
| CTTCAAAGCTTCAAACTTTG+GGG | - | chr7.1:6072170-6072189 | MS.gene051911:CDS | 35.0% | |
| GAAGTCAAACATTGACCAAT+AGG | + | chr7.1:6074252-6074271 | None:intergenic | 35.0% | |
| GAATGCATCACGCATAATAA+TGG | + | chr7.1:6072730-6072749 | None:intergenic | 35.0% | |
| GCATAGAATTTGATTCAGGT+AGG | - | chr7.1:6072427-6072446 | MS.gene051911:CDS | 35.0% | |
| GCTTCAAAGCTTCAAACTTT+GGG | - | chr7.1:6072169-6072188 | MS.gene051911:CDS | 35.0% | |
| GGAACTTACAACACAATTGT+TGG | - | chr7.1:6074650-6074669 | MS.gene051911:CDS | 35.0% | |
| GTAGCACATATTATGTGCAT+TGG | - | chr7.1:6074032-6074051 | MS.gene051911:intron | 35.0% | |
| TCCCTGCATATAATGAAACT+CGG | + | chr7.1:6072849-6072868 | None:intergenic | 35.0% | |
| TCCGAGTTTCATTATATGCA+GGG | - | chr7.1:6072845-6072864 | MS.gene051911:intron | 35.0% | |
| TGCTAGTACCAGTTGAAATT+GGG | - | chr7.1:6073145-6073164 | MS.gene051911:intron | 35.0% | |
| ! | AAGTAGGAGCATGCAATAAT+AGG | + | chr7.1:6072305-6072324 | None:intergenic | 35.0% |
| ! | ATGGGTTTTCGTTTAGAGAA+AGG | - | chr7.1:6073283-6073302 | MS.gene051911:CDS | 35.0% |
| ! | GTTTTCGTTTAGAGAAAGGA+CGG | - | chr7.1:6073287-6073306 | MS.gene051911:CDS | 35.0% |
| ! | TTATGTGGTTACATGGCTTT+TGG | - | chr7.1:6073483-6073502 | MS.gene051911:CDS | 35.0% |
| !! | AAAAGAAAGCATTGCACACA+AGG | + | chr7.1:6074522-6074541 | None:intergenic | 35.0% |
| !! | AATTTTAGGTGAAATGTGGC+TGG | + | chr7.1:6074551-6074570 | None:intergenic | 35.0% |
| !! | GCTCTTTTGGAAGATAACAA+AGG | + | chr7.1:6072151-6072170 | None:intergenic | 35.0% |
| !! | TTGAAGATGATGATGGTGTT+TGG | - | chr7.1:6073765-6073784 | MS.gene051911:CDS | 35.0% |
| !! | TTTGGGTTGTATGTGTCAAT+TGG | - | chr7.1:6073813-6073832 | MS.gene051911:CDS | 35.0% |
| !!! | CATGGCTGTTTTTTGTTTTG+AGG | - | chr7.1:6073350-6073369 | MS.gene051911:CDS | 35.0% |
| !!! | GTTTTTTGTTTTGAGGGGTT+TGG | - | chr7.1:6073357-6073376 | MS.gene051911:CDS | 35.0% |
| !!! | TGGCTGTTTTTTGTTTTGAG+GGG | - | chr7.1:6073352-6073371 | MS.gene051911:CDS | 35.0% |
| !!! | TTGAAGCTTTGAAGCTCTTT+TGG | + | chr7.1:6072164-6072183 | None:intergenic | 35.0% |
| !!! | TTTTGGGTTATGTGGTTACA+TGG | - | chr7.1:6073476-6073495 | MS.gene051911:CDS | 35.0% |
| AAACGAAAACCCATCCTCTA+AGG | + | chr7.1:6073277-6073296 | None:intergenic | 40.0% | |
| AGCTATGGGAATTGTAGTGA+AGG | - | chr7.1:6073236-6073255 | MS.gene051911:intron | 40.0% | |
| AGTTGTGTATGTCCTGCTTT+GGG | - | chr7.1:6074010-6074029 | MS.gene051911:intron | 40.0% | |
| ATCAAGATCTTATGGAGACC+TGG | - | chr7.1:6072966-6072985 | MS.gene051911:intron | 40.0% | |
| ATTAAGGGTCACAATGTCTC+TGG | + | chr7.1:6073517-6073536 | None:intergenic | 40.0% | |
| CAGTTGAAATTGGGATGTCA+TGG | - | chr7.1:6073154-6073173 | MS.gene051911:intron | 40.0% | |
| CATCATCATCTTCAAGCACT+AGG | + | chr7.1:6073760-6073779 | None:intergenic | 40.0% | |
| CATGACATCCCAATTTCAAC+TGG | + | chr7.1:6073156-6073175 | None:intergenic | 40.0% | |
| CGTGATGCATTCATTGATCT+TGG | - | chr7.1:6072738-6072757 | MS.gene051911:intron | 40.0% | |
| CTAGTGCTTGAAGATGATGA+TGG | - | chr7.1:6073758-6073777 | MS.gene051911:CDS | 40.0% | |
| CTCCGAGTTTCATTATATGC+AGG | - | chr7.1:6072844-6072863 | MS.gene051911:intron | 40.0% | |
| GAAATTGGGATGTCATGGAT+AGG | - | chr7.1:6073159-6073178 | MS.gene051911:intron | 40.0% | |
| GAGGCAAATACACCAAATTC+TGG | + | chr7.1:6074485-6074504 | None:intergenic | 40.0% | |
| GCTTCATTTGTGCCAGAATT+TGG | - | chr7.1:6074470-6074489 | MS.gene051911:intron | 40.0% | |
| GGCAAACCAATTATGTGCAT+TGG | - | chr7.1:6074079-6074098 | MS.gene051911:intron | 40.0% | |
| GGTGTATTTGCCTCATTTGT+GGG | - | chr7.1:6074491-6074510 | MS.gene051911:CDS | 40.0% | |
| GTGTATTTGCCTCATTTGTG+GGG | - | chr7.1:6074492-6074511 | MS.gene051911:CDS | 40.0% | |
| GTTTGCCGTAGACATATCTA+AGG | + | chr7.1:6074066-6074085 | None:intergenic | 40.0% | |
| TAATATGTGCTACCCAAAGC+AGG | + | chr7.1:6074025-6074044 | None:intergenic | 40.0% | |
| TAGAAAGATGACCCACAAGT+AGG | + | chr7.1:6072321-6072340 | None:intergenic | 40.0% | |
| TAGTTGTGTATGTCCTGCTT+TGG | - | chr7.1:6074009-6074028 | MS.gene051911:intron | 40.0% | |
| TATTGCATGCTCCTACTTGT+GGG | - | chr7.1:6072307-6072326 | MS.gene051911:CDS | 40.0% | |
| TCAAGATCTTATGGAGACCT+GGG | - | chr7.1:6072967-6072986 | MS.gene051911:intron | 40.0% | |
| TCACTACAATTCCCATAGCT+AGG | + | chr7.1:6073236-6073255 | None:intergenic | 40.0% | |
| TGCCCTAGAGAATTCTATGA+AGG | - | chr7.1:6073389-6073408 | MS.gene051911:CDS | 40.0% | |
| TGGTGTATTTGCCTCATTTG+TGG | - | chr7.1:6074490-6074509 | MS.gene051911:CDS | 40.0% | |
| TTATTGCATGCTCCTACTTG+TGG | - | chr7.1:6072306-6072325 | MS.gene051911:CDS | 40.0% | |
| TTGTCTATGTGGTCACATGT+TGG | - | chr7.1:6073900-6073919 | MS.gene051911:intron | 40.0% | |
| ! | AAAGTCTGAGCCAGCAATTT+TGG | + | chr7.1:6073429-6073448 | None:intergenic | 40.0% |
| ! | AAGTCTGAGCCAGCAATTTT+GGG | + | chr7.1:6073428-6073447 | None:intergenic | 40.0% |
| ! | ATACATCAGTCGTGCTATTG+TGG | - | chr7.1:6074427-6074446 | MS.gene051911:intron | 40.0% |
| ! | CAAGCGATGGTCCATATTTT+TGG | + | chr7.1:6073110-6073129 | None:intergenic | 40.0% |
| ! | GTAGTTGGAACTGGTGTTTT+GGG | - | chr7.1:6072208-6072227 | MS.gene051911:CDS | 40.0% |
| ! | TGTAGTTGGAACTGGTGTTT+TGG | - | chr7.1:6072207-6072226 | MS.gene051911:CDS | 40.0% |
| ! | TGTTGTGTACTTCACTGACT+TGG | - | chr7.1:6072623-6072642 | MS.gene051911:intron | 40.0% |
| ! | TTCCAAAGCATCTATAACCC+AGG | + | chr7.1:6072987-6073006 | None:intergenic | 40.0% |
| !! | TGGGTTTACCCTTTGCTTTT+CGG | - | chr7.1:6072227-6072246 | MS.gene051911:CDS | 40.0% |
| AATATGTAGGAGGCAAGCGA+TGG | + | chr7.1:6073123-6073142 | None:intergenic | 45.0% | |
| ACCAGCAATCCGAAAAGCAA+AGG | + | chr7.1:6072239-6072258 | None:intergenic | 45.0% | |
| AGTGAAGGAAGATGTACGAG+TGG | - | chr7.1:6073251-6073270 | MS.gene051911:CDS | 45.0% | |
| ATAGACAAACACACGCTTCG+TGG | + | chr7.1:6073888-6073907 | None:intergenic | 45.0% | |
| ATGAGAAAGCTTCCATTGCC+AGG | - | chr7.1:6074184-6074203 | MS.gene051911:intron | 45.0% | |
| CCAGCAATCCGAAAAGCAAA+GGG | + | chr7.1:6072238-6072257 | None:intergenic | 45.0% | |
| GAACGTGCTTGTAAGCATGT+TGG | + | chr7.1:6073953-6073972 | None:intergenic | 45.0% | |
| GAAGCGTGTGTTTGTCTATG+TGG | - | chr7.1:6073889-6073908 | MS.gene051911:intron | 45.0% | |
| GACCTGGGTTATAGATGCTT+TGG | - | chr7.1:6072982-6073001 | MS.gene051911:intron | 45.0% | |
| GCATCACGCATAATAATGGC+AGG | + | chr7.1:6072726-6072745 | None:intergenic | 45.0% | |
| GGCTATAGCTCAGATAGCTT+TGG | - | chr7.1:6072460-6072479 | MS.gene051911:CDS | 45.0% | |
| GTGTGCAATGTCCTAGCTAT+GGG | - | chr7.1:6073222-6073241 | MS.gene051911:intron | 45.0% | |
| TGCAGGATCTGTTGCGTATT+TGG | - | chr7.1:6073053-6073072 | MS.gene051911:intron | 45.0% | |
| TGTGTGCAATGTCCTAGCTA+TGG | - | chr7.1:6073221-6073240 | MS.gene051911:intron | 45.0% | |
| TTCTCTATGCCTCTGGCAAA+AGG | - | chr7.1:6074580-6074599 | MS.gene051911:CDS | 45.0% | |
| TTGTGACCCTTAATCTCCCT+AGG | - | chr7.1:6073523-6073542 | MS.gene051911:CDS | 45.0% | |
| ! | AATCAAGGACCTTTTGCCAG+AGG | + | chr7.1:6074592-6074611 | None:intergenic | 45.0% |
| ! | GTTCTCGAGTTGTCATTGCA+TGG | - | chr7.1:6072874-6072893 | MS.gene051911:intron | 45.0% |
| ! | TCGCTTTGTGTTGCTATCGT+TGG | - | chr7.1:6072271-6072290 | MS.gene051911:CDS | 45.0% |
| ! | TGAACAAAGAGCGTGAGAAG+AGG | + | chr7.1:6073708-6073727 | None:intergenic | 45.0% |
| !! | CTCAGCCATCGATTTCAGAT+CGG | + | chr7.1:6072806-6072825 | None:intergenic | 45.0% |
| !! | GGTTTGGTGCAGAGATAAGT+TGG | - | chr7.1:6072921-6072940 | MS.gene051911:intron | 45.0% |
| !! | TGCTTTTCGGATTGCTGGTT+GGG | - | chr7.1:6072240-6072259 | MS.gene051911:CDS | 45.0% |
| !! | TTGCTTTTCGGATTGCTGGT+TGG | - | chr7.1:6072239-6072258 | MS.gene051911:CDS | 45.0% |
| !!! | TTGCTGGCTCAGACTTTTAG+TGG | - | chr7.1:6073432-6073451 | MS.gene051911:CDS | 45.0% |
| ACCAGCTCCTAGGGAGATTA+AGG | + | chr7.1:6073533-6073552 | None:intergenic | 50.0% | |
| ACGCTTCGTGGACCGAATTT+AGG | + | chr7.1:6073876-6073895 | None:intergenic | 50.0% | |
| ACGGCAATCACGTCGAACAT+TGG | - | chr7.1:6073306-6073325 | MS.gene051911:CDS | 50.0% | |
| ATCGTGGTAGCACAATGTGC+AGG | - | chr7.1:6073036-6073055 | MS.gene051911:intron | 50.0% | |
| ATGACAGGTAGGATTGTGCC+TGG | - | chr7.1:6074289-6074308 | MS.gene051911:intron | 50.0% | |
| CAAGAGATGACCAGCTCCTA+GGG | + | chr7.1:6073542-6073561 | None:intergenic | 50.0% | |
| CAATCACGTCGAACATTGGG+GGG | - | chr7.1:6073310-6073329 | MS.gene051911:CDS | 50.0% | |
| CCAGCTCCTAGGGAGATTAA+GGG | + | chr7.1:6073532-6073551 | None:intergenic | 50.0% | |
| CGGCAATCACGTCGAACATT+GGG | - | chr7.1:6073307-6073326 | MS.gene051911:CDS | 50.0% | |
| GCAATCACGTCGAACATTGG+GGG | - | chr7.1:6073309-6073328 | MS.gene051911:CDS | 50.0% | |
| GGAATGTGAACATAAGCCCC+AGG | + | chr7.1:6074310-6074329 | None:intergenic | 50.0% | |
| GGCAATCACGTCGAACATTG+GGG | - | chr7.1:6073308-6073327 | MS.gene051911:CDS | 50.0% | |
| TGACAGGTAGGATTGTGCCT+GGG | - | chr7.1:6074290-6074309 | MS.gene051911:intron | 50.0% | |
| TGCTATTGTGGTGGTTGTGC+TGG | - | chr7.1:6074439-6074458 | MS.gene051911:intron | 50.0% | |
| TTGGACACAAAGCCTTGCAG+TGG | - | chr7.1:6073919-6073938 | MS.gene051911:intron | 50.0% | |
| ! | AGATGTACGAGTGGCCTTAG+AGG | - | chr7.1:6073260-6073279 | MS.gene051911:CDS | 50.0% |
| ! | CAAGGTACTCCCCACAAATG+AGG | + | chr7.1:6074504-6074523 | None:intergenic | 50.0% |
| ! | CATCAGTCGTGCTATTGTGG+TGG | - | chr7.1:6074430-6074449 | MS.gene051911:intron | 50.0% |
| ! | GTCGACCGATCTGAAATCGA+TGG | - | chr7.1:6072798-6072817 | MS.gene051911:intron | 50.0% |
| ! | TACGAGTGGCCTTAGAGGAT+GGG | - | chr7.1:6073265-6073284 | MS.gene051911:CDS | 50.0% |
| ! | TTGGCTCTTCTCTATGCCTC+TGG | - | chr7.1:6074573-6074592 | MS.gene051911:CDS | 50.0% |
| !! | CCCTTTGCTTTTCGGATTGC+TGG | - | chr7.1:6072235-6072254 | MS.gene051911:CDS | 50.0% |
| !! | GATGCTTTGGAACATTCGGC+CGG | - | chr7.1:6072995-6073014 | MS.gene051911:intron | 50.0% |
| ACAGCCATGCCTGCTGCAAA+TGG | + | chr7.1:6073339-6073358 | None:intergenic | 55.0% | |
| CCCTTAATCTCCCTAGGAGC+TGG | - | chr7.1:6073529-6073548 | MS.gene051911:CDS | 55.0% | |
| CTGGTCATCTCTTGCCGTAC+AGG | - | chr7.1:6073548-6073567 | MS.gene051911:CDS | 55.0% | |
| GACAGGTAGGATTGTGCCTG+GGG | - | chr7.1:6074291-6074310 | MS.gene051911:intron | 55.0% | |
| GCAAGAGATGACCAGCTCCT+AGG | + | chr7.1:6073543-6073562 | None:intergenic | 55.0% | |
| GGCATCAGAAGAGCCGTTAG+TGG | - | chr7.1:6072942-6072961 | MS.gene051911:intron | 55.0% | |
| TTGGACTCAACGCCACTGCA+AGG | + | chr7.1:6073934-6073953 | None:intergenic | 55.0% | |
| ! | GTACGAGTGGCCTTAGAGGA+TGG | - | chr7.1:6073264-6073283 | MS.gene051911:CDS | 55.0% |
| ! | GTTGCCATTTGCAGCAGGCA+TGG | - | chr7.1:6073332-6073351 | MS.gene051911:CDS | 55.0% |
| ! | CGGATTGCTGGTTGGGTTGC+TGG | - | chr7.1:6072247-6072266 | MS.gene051911:CDS | 60.0% |
| ! | GGGGGGTTGCCATTTGCAGC+AGG | - | chr7.1:6073327-6073346 | MS.gene051911:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 6072133 | 6074679 | 6072133 | ID=MS.gene051911 |
| chr7.1 | mRNA | 6072133 | 6074679 | 6072133 | ID=MS.gene051911.t1;Parent=MS.gene051911 |
| chr7.1 | exon | 6074488 | 6074679 | 6074488 | ID=MS.gene051911.t1.exon1;Parent=MS.gene051911.t1 |
| chr7.1 | CDS | 6074488 | 6074679 | 6074488 | ID=cds.MS.gene051911.t1;Parent=MS.gene051911.t1 |
| chr7.1 | exon | 6073243 | 6073890 | 6073243 | ID=MS.gene051911.t1.exon2;Parent=MS.gene051911.t1 |
| chr7.1 | CDS | 6073243 | 6073890 | 6073243 | ID=cds.MS.gene051911.t1;Parent=MS.gene051911.t1 |
| chr7.1 | exon | 6072133 | 6072516 | 6072133 | ID=MS.gene051911.t1.exon3;Parent=MS.gene051911.t1 |
| chr7.1 | CDS | 6072133 | 6072516 | 6072133 | ID=cds.MS.gene051911.t1;Parent=MS.gene051911.t1 |
| Gene Sequence |
| Protein sequence |
