Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57980.t1 | XP_003610309.1 | 95 | 636 | 27 | 2 | 2 | 637 | 1 | 631 | 5.40E-306 | 1059.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57980.t1 | Q54ZR7 | 44.8 | 647 | 312 | 11 | 2 | 636 | 1 | 614 | 3.3e-110 | 400.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57980.t1 | G7JGN9 | 95.0 | 636 | 27 | 2 | 2 | 637 | 1 | 631 | 3.9e-306 | 1059.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene57980 | 0.820244 | 7.60E-53 | -1.69E-46 |
| MS.gene04918 | MS.gene57980 | 0.854528 | 1.16E-61 | -1.69E-46 |
| MS.gene04919 | MS.gene57980 | 0.830193 | 3.37E-55 | -1.69E-46 |
| MS.gene04920 | MS.gene57980 | 0.84555 | 3.79E-59 | -1.69E-46 |
| MS.gene049283 | MS.gene57980 | 0.900358 | 7.94E-78 | -1.69E-46 |
| MS.gene049350 | MS.gene57980 | 0.800063 | 1.72E-48 | -1.69E-46 |
| MS.gene049368 | MS.gene57980 | 0.840107 | 1.06E-57 | -1.69E-46 |
| MS.gene049419 | MS.gene57980 | -0.819613 | 1.06E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene57980 | 0.860604 | 1.84E-63 | -1.69E-46 |
| MS.gene049680 | MS.gene57980 | 0.825577 | 4.35E-54 | -1.69E-46 |
| MS.gene049807 | MS.gene57980 | 0.810701 | 1.01E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene57980 | 0.869452 | 3.06E-66 | -1.69E-46 |
| MS.gene04998 | MS.gene57980 | 0.816328 | 5.85E-52 | -1.69E-46 |
| MS.gene050085 | MS.gene57980 | 0.820993 | 5.11E-53 | -1.69E-46 |
| MS.gene050213 | MS.gene57980 | 0.801966 | 7.02E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene57980 | 0.84701 | 1.52E-59 | -1.69E-46 |
| MS.gene050414 | MS.gene57980 | 0.887615 | 1.22E-72 | -1.69E-46 |
| MS.gene050559 | MS.gene57980 | 0.807037 | 6.15E-50 | -1.69E-46 |
| MS.gene050571 | MS.gene57980 | 0.808966 | 2.39E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene57980 | 0.879437 | 1.25E-69 | -1.69E-46 |
| MS.gene050654 | MS.gene57980 | 0.872231 | 3.73E-67 | -1.69E-46 |
| MS.gene050689 | MS.gene57980 | 0.811811 | 5.81E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene57980 | 0.862538 | 4.72E-64 | -1.69E-46 |
| MS.gene050838 | MS.gene57980 | 0.808743 | 2.67E-50 | -1.69E-46 |
| MS.gene050931 | MS.gene57980 | 0.804559 | 2.04E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene57980 | 0.82001 | 8.60E-53 | -1.69E-46 |
| MS.gene050945 | MS.gene57980 | 0.869699 | 2.55E-66 | -1.69E-46 |
| MS.gene050955 | MS.gene57980 | 0.849359 | 3.40E-60 | -1.69E-46 |
| MS.gene051003 | MS.gene57980 | 0.887088 | 1.94E-72 | -1.69E-46 |
| MS.gene051043 | MS.gene57980 | 0.873622 | 1.27E-67 | -1.69E-46 |
| MS.gene051184 | MS.gene57980 | 0.822747 | 2.01E-53 | -1.69E-46 |
| MS.gene051226 | MS.gene57980 | 0.806545 | 7.81E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene57980 | 0.890369 | 1.05E-73 | -1.69E-46 |
| MS.gene051275 | MS.gene57980 | 0.818927 | 1.52E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene57980 | 0.857349 | 1.73E-62 | -1.69E-46 |
| MS.gene051597 | MS.gene57980 | 0.801841 | 7.44E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene57980 | 0.800151 | 1.65E-48 | -1.69E-46 |
| MS.gene051699 | MS.gene57980 | 0.812359 | 4.41E-51 | -1.69E-46 |
| MS.gene051848 | MS.gene57980 | -0.800108 | 1.68E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene57980 | 0.805799 | 1.12E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene57980 | 0.838022 | 3.68E-57 | -1.69E-46 |
| MS.gene051902 | MS.gene57980 | 0.82499 | 5.98E-54 | -1.69E-46 |
| MS.gene051911 | MS.gene57980 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene051975 | MS.gene57980 | 0.826448 | 2.70E-54 | -1.69E-46 |
| MS.gene052016 | MS.gene57980 | 0.839229 | 1.80E-57 | -1.69E-46 |
| MS.gene052072 | MS.gene57980 | 0.851481 | 8.63E-61 | -1.69E-46 |
| MS.gene052118 | MS.gene57980 | 0.804218 | 2.40E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene57980 | -0.806137 | 9.52E-50 | -1.69E-46 |
| MS.gene052242 | MS.gene57980 | -0.83017 | 3.42E-55 | -1.69E-46 |
| MS.gene052296 | MS.gene57980 | 0.840429 | 8.74E-58 | -1.69E-46 |
| MS.gene052307 | MS.gene57980 | 0.8445 | 7.28E-59 | -1.69E-46 |
| MS.gene052335 | MS.gene57980 | 0.837113 | 6.29E-57 | -1.69E-46 |
| MS.gene052342 | MS.gene57980 | 0.841639 | 4.21E-58 | -1.69E-46 |
| MS.gene052434 | MS.gene57980 | 0.813037 | 3.13E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene57980 | 0.839641 | 1.40E-57 | -1.69E-46 |
| MS.gene052518 | MS.gene57980 | 0.824796 | 6.65E-54 | -1.69E-46 |
| MS.gene052533 | MS.gene57980 | 0.835744 | 1.40E-56 | -1.69E-46 |
| MS.gene052609 | MS.gene57980 | 0.830243 | 3.28E-55 | -1.69E-46 |
| MS.gene052932 | MS.gene57980 | 0.837962 | 3.81E-57 | -1.69E-46 |
| MS.gene053058 | MS.gene57980 | 0.839709 | 1.35E-57 | -1.69E-46 |
| MS.gene053079 | MS.gene57980 | 0.812414 | 4.29E-51 | -1.69E-46 |
| MS.gene053143 | MS.gene57980 | 0.838166 | 3.38E-57 | -1.69E-46 |
| MS.gene053228 | MS.gene57980 | 0.810073 | 1.38E-50 | -1.69E-46 |
| MS.gene053272 | MS.gene57980 | -0.827068 | 1.92E-54 | -1.69E-46 |
| MS.gene053295 | MS.gene57980 | 0.803811 | 2.92E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene57980 | 0.831731 | 1.41E-55 | -1.69E-46 |
| MS.gene053456 | MS.gene57980 | 0.811257 | 7.66E-51 | -1.69E-46 |
| MS.gene05350 | MS.gene57980 | 0.805366 | 1.38E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene57980 | 0.808931 | 2.43E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene57980 | 0.810013 | 1.42E-50 | -1.69E-46 |
| MS.gene053620 | MS.gene57980 | 0.802561 | 5.29E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene57980 | 0.802805 | 4.71E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene57980 | 0.838395 | 2.95E-57 | -1.69E-46 |
| MS.gene053879 | MS.gene57980 | 0.827982 | 1.16E-54 | -1.69E-46 |
| MS.gene053931 | MS.gene57980 | 0.864867 | 8.92E-65 | -1.69E-46 |
| MS.gene053963 | MS.gene57980 | 0.820006 | 8.61E-53 | -1.69E-46 |
| MS.gene054004 | MS.gene57980 | 0.841926 | 3.53E-58 | -1.69E-46 |
| MS.gene054178 | MS.gene57980 | 0.824665 | 7.14E-54 | -1.69E-46 |
| MS.gene054222 | MS.gene57980 | 0.808287 | 3.34E-50 | -1.69E-46 |
| MS.gene054403 | MS.gene57980 | 0.864282 | 1.36E-64 | -1.69E-46 |
| MS.gene054413 | MS.gene57980 | 0.832589 | 8.67E-56 | -1.69E-46 |
| MS.gene054479 | MS.gene57980 | 0.802156 | 6.41E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene57980 | 0.801764 | 7.72E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene57980 | 0.803835 | 2.88E-49 | -1.69E-46 |
| MS.gene054709 | MS.gene57980 | 0.830504 | 2.83E-55 | -1.69E-46 |
| MS.gene054772 | MS.gene57980 | 0.813042 | 3.13E-51 | -1.69E-46 |
| MS.gene054892 | MS.gene57980 | 0.883932 | 2.95E-71 | -1.69E-46 |
| MS.gene054893 | MS.gene57980 | 0.890025 | 1.43E-73 | -1.69E-46 |
| MS.gene054957 | MS.gene57980 | 0.855879 | 4.69E-62 | -1.69E-46 |
| MS.gene055150 | MS.gene57980 | 0.830994 | 2.15E-55 | -1.69E-46 |
| MS.gene05517 | MS.gene57980 | 0.807784 | 4.27E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene57980 | 0.841392 | 4.89E-58 | -1.69E-46 |
| MS.gene055841 | MS.gene57980 | 0.813659 | 2.29E-51 | -1.69E-46 |
| MS.gene055864 | MS.gene57980 | 0.801477 | 8.84E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene57980 | 0.838659 | 2.52E-57 | -1.69E-46 |
| MS.gene056082 | MS.gene57980 | 0.806095 | 9.71E-50 | -1.69E-46 |
| MS.gene056097 | MS.gene57980 | 0.811812 | 5.81E-51 | -1.69E-46 |
| MS.gene05615 | MS.gene57980 | 0.800252 | 1.57E-48 | -1.69E-46 |
| MS.gene056181 | MS.gene57980 | 0.845625 | 3.61E-59 | -1.69E-46 |
| MS.gene056578 | MS.gene57980 | 0.825583 | 4.33E-54 | -1.69E-46 |
| MS.gene056677 | MS.gene57980 | 0.825218 | 5.29E-54 | -1.69E-46 |
| MS.gene056699 | MS.gene57980 | 0.846176 | 2.56E-59 | -1.69E-46 |
| MS.gene056787 | MS.gene57980 | 0.806249 | 9.02E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene57980 | 0.824211 | 9.13E-54 | -1.69E-46 |
| MS.gene05690 | MS.gene57980 | 0.802921 | 4.46E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene57980 | 0.808357 | 3.22E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene57980 | 0.878501 | 2.67E-69 | -1.69E-46 |
| MS.gene057155 | MS.gene57980 | 0.817068 | 3.99E-52 | -1.69E-46 |
| MS.gene057174 | MS.gene57980 | 0.801695 | 7.98E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene57980 | 0.842153 | 3.08E-58 | -1.69E-46 |
| MS.gene057371 | MS.gene57980 | 0.807738 | 4.36E-50 | -1.69E-46 |
| MS.gene057622 | MS.gene57980 | 0.872731 | 2.54E-67 | -1.69E-46 |
| MS.gene05781 | MS.gene57980 | 0.825321 | 5.00E-54 | -1.69E-46 |
| MS.gene057890 | MS.gene57980 | -0.815619 | 8.42E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene57980 | 0.808706 | 2.71E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene57980 | 0.806031 | 1.00E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene57980 | 0.846002 | 2.85E-59 | -1.69E-46 |
| MS.gene058009 | MS.gene57980 | 0.820386 | 7.05E-53 | -1.69E-46 |
| MS.gene058054 | MS.gene57980 | 0.813788 | 2.14E-51 | -1.69E-46 |
| MS.gene058081 | MS.gene57980 | 0.813026 | 3.15E-51 | -1.69E-46 |
| MS.gene058095 | MS.gene57980 | 0.849264 | 3.61E-60 | -1.69E-46 |
| MS.gene058149 | MS.gene57980 | 0.801824 | 7.50E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene57980 | 0.855238 | 7.21E-62 | -1.69E-46 |
| MS.gene058261 | MS.gene57980 | 0.810625 | 1.05E-50 | -1.69E-46 |
| MS.gene058279 | MS.gene57980 | 0.816953 | 4.24E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene57980 | 0.810678 | 1.02E-50 | -1.69E-46 |
| MS.gene058330 | MS.gene57980 | 0.802215 | 6.24E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene57980 | 0.82312 | 1.64E-53 | -1.69E-46 |
| MS.gene058592 | MS.gene57980 | 0.832433 | 9.48E-56 | -1.69E-46 |
| MS.gene058781 | MS.gene57980 | 0.842582 | 2.37E-58 | -1.69E-46 |
| MS.gene058783 | MS.gene57980 | 0.824366 | 8.39E-54 | -1.69E-46 |
| MS.gene05878 | MS.gene57980 | 0.81868 | 1.73E-52 | -1.69E-46 |
| MS.gene059007 | MS.gene57980 | 0.802359 | 5.82E-49 | -1.69E-46 |
| MS.gene059144 | MS.gene57980 | 0.819568 | 1.08E-52 | -1.69E-46 |
| MS.gene059146 | MS.gene57980 | 0.875129 | 3.93E-68 | -1.69E-46 |
| MS.gene059170 | MS.gene57980 | 0.864839 | 9.11E-65 | -1.69E-46 |
| MS.gene05952 | MS.gene57980 | 0.850362 | 1.78E-60 | -1.69E-46 |
| MS.gene059778 | MS.gene57980 | 0.822566 | 2.21E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene57980 | -0.878551 | 2.56E-69 | -1.69E-46 |
| MS.gene059901 | MS.gene57980 | -0.835462 | 1.65E-56 | -1.69E-46 |
| MS.gene059949 | MS.gene57980 | 0.820909 | 5.34E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene57980 | 0.804118 | 2.52E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene57980 | 0.807088 | 6.00E-50 | -1.69E-46 |
| MS.gene060244 | MS.gene57980 | 0.828869 | 7.07E-55 | -1.69E-46 |
| MS.gene060259 | MS.gene57980 | 0.849076 | 4.08E-60 | -1.69E-46 |
| MS.gene060435 | MS.gene57980 | 0.815831 | 7.56E-52 | -1.69E-46 |
| MS.gene060522 | MS.gene57980 | 0.808021 | 3.80E-50 | -1.69E-46 |
| MS.gene060527 | MS.gene57980 | 0.80551 | 1.29E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene57980 | 0.843995 | 9.94E-59 | -1.69E-46 |
| MS.gene060777 | MS.gene57980 | 0.811609 | 6.43E-51 | -1.69E-46 |
| MS.gene060840 | MS.gene57980 | 0.821263 | 4.43E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene57980 | 0.851633 | 7.81E-61 | -1.69E-46 |
| MS.gene060933 | MS.gene57980 | 0.852854 | 3.51E-61 | -1.69E-46 |
| MS.gene060935 | MS.gene57980 | 0.869671 | 2.60E-66 | -1.69E-46 |
| MS.gene060937 | MS.gene57980 | 0.88278 | 7.82E-71 | -1.69E-46 |
| MS.gene061100 | MS.gene57980 | 0.888369 | 6.27E-73 | -1.69E-46 |
| MS.gene061160 | MS.gene57980 | 0.849899 | 2.40E-60 | -1.69E-46 |
| MS.gene061188 | MS.gene57980 | 0.816161 | 6.38E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 144 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTTTCATCCTTTCATTTA+AGG | 0.135782 | 8.4:+3384619 | None:intergenic |
| GGATAGGAAGGTTGATTATT+TGG | 0.186314 | 8.4:-3387973 | MS.gene57980:CDS |
| CTTTCAATGGTTTACATATC+TGG | 0.196127 | 8.4:-3384723 | MS.gene57980:CDS |
| TGATTATGCAGGTTGCTTAC+TGG | 0.239203 | 8.4:-3386399 | MS.gene57980:intron |
| GTTGGTAATGTTAGTGTAAA+TGG | 0.240516 | 8.4:-3388212 | MS.gene57980:CDS |
| CATAACCCTTCTCAAATATA+GGG | 0.264100 | 8.4:+3386196 | None:intergenic |
| TCATAACCCTTCTCAAATAT+AGG | 0.269160 | 8.4:+3386195 | None:intergenic |
| CTCTGGTCATGCAATGAAAT+TGG | 0.273870 | 8.4:-3388767 | MS.gene57980:CDS |
| GTTGTATTTGTTGGAGTTAA+TGG | 0.282982 | 8.4:-3386544 | MS.gene57980:CDS |
| CTTTATTCCTAACCTTCTTC+TGG | 0.284805 | 8.4:+3388141 | None:intergenic |
| TATTGCTGGGAAGGCCAATT+TGG | 0.285068 | 8.4:-3387052 | MS.gene57980:CDS |
| CCATATGTTGTTGTATTTGT+TGG | 0.324829 | 8.4:-3386553 | MS.gene57980:CDS |
| CCTGACCTGGTCTTATTTGT+TGG | 0.326012 | 8.4:-3385337 | MS.gene57980:CDS |
| CAAGTCCGACTTCTCCAAAT+TGG | 0.330709 | 8.4:+3387038 | None:intergenic |
| AACCAAGGCTGAGCCGAAAA+AGG | 0.357649 | 8.4:-3388087 | MS.gene57980:CDS |
| GACTCATGCACGCAGACTTC+AGG | 0.360707 | 8.4:-3386302 | MS.gene57980:intron |
| ATGCTTGTGCTCAGTATTGC+TGG | 0.365590 | 8.4:-3387066 | MS.gene57980:intron |
| CAAGATCCCATCAATCAATC+TGG | 0.383740 | 8.4:+3385128 | None:intergenic |
| GAGTTTCTTGAGGTCGGTAT+AGG | 0.387081 | 8.4:+3384668 | None:intergenic |
| CAGAAGAAGGTTAGGAATAA+AGG | 0.388438 | 8.4:-3388140 | MS.gene57980:CDS |
| ACGGATCATGTTGATGTTGA+TGG | 0.394256 | 8.4:-3388008 | MS.gene57980:CDS |
| GGTGGGAGCTGCACTTTCAA+TGG | 0.401497 | 8.4:-3384736 | MS.gene57980:CDS |
| CGGTGGTTGTAGGTGGGAAT+AGG | 0.404012 | 8.4:-3388415 | MS.gene57980:CDS |
| TTTGACAGTGCTCTCATCAA+TGG | 0.412182 | 8.4:+3385379 | None:intergenic |
| ATAAATACATACCACATTCT+TGG | 0.414415 | 8.4:+3386978 | None:intergenic |
| TCCTTCAGAGCTTTCAAAGC+TGG | 0.420133 | 8.4:+3387012 | None:intergenic |
| TTGAGGAGTAACGGTGTTGT+TGG | 0.422921 | 8.4:-3388230 | MS.gene57980:CDS |
| CCAACAAATACAACAACATA+TGG | 0.423685 | 8.4:+3386553 | None:intergenic |
| GCCAGTGCTGGTGGTGGTGG+CGG | 0.424543 | 8.4:-3388344 | MS.gene57980:CDS |
| TGTGGCAAAAGAAGCAATTC+AGG | 0.429961 | 8.4:-3386157 | MS.gene57980:CDS |
| AAATCTAACTTAGTTTCAAC+GGG | 0.430928 | 8.4:+3388032 | None:intergenic |
| TAGTGACAGTGAGGATGAAG+AGG | 0.435461 | 8.4:-3387904 | MS.gene57980:CDS |
| CAATTTGGAGAAGTCGGACT+TGG | 0.441725 | 8.4:-3387037 | MS.gene57980:CDS |
| AAATCGAATCCGGTGGTTGT+AGG | 0.450153 | 8.4:-3388425 | MS.gene57980:CDS |
| GTTCGACACTATTGATGATA+AGG | 0.450965 | 8.4:-3385097 | MS.gene57980:intron |
| AATGCCAGTGCTGGTGGTGG+TGG | 0.452714 | 8.4:-3388347 | MS.gene57980:CDS |
| ACCGCCACCACCACCAGCAC+TGG | 0.454509 | 8.4:+3388343 | None:intergenic |
| CGTTCTGTTATTGTGAATAA+CGG | 0.459586 | 8.4:-3388266 | MS.gene57980:CDS |
| TGTTGATGGGGATGCTGATA+AGG | 0.462630 | 8.4:-3387994 | MS.gene57980:CDS |
| GGAAGCTTCACGGAATGGTT+CGG | 0.463640 | 8.4:-3386136 | MS.gene57980:CDS |
| ATAGGCTCCAGAAGAAGGTT+AGG | 0.465195 | 8.4:-3388148 | MS.gene57980:CDS |
| AGTGCTGGTGGTGGTGGCGG+TGG | 0.465276 | 8.4:-3388341 | MS.gene57980:CDS |
| TCAGTGGCTGCAAGTCTTGA+AGG | 0.467409 | 8.4:-3386816 | MS.gene57980:CDS |
| GGCGTTCTATTGACATATTG+AGG | 0.470946 | 8.4:-3386606 | MS.gene57980:CDS |
| CAAGAGGAGGATTAATCCTC+TGG | 0.471238 | 8.4:-3388784 | MS.gene57980:CDS |
| CCTACACCCAGATTGATTGA+TGG | 0.472241 | 8.4:-3385135 | MS.gene57980:CDS |
| CGGATCATGTTGATGTTGAT+GGG | 0.473173 | 8.4:-3388007 | MS.gene57980:CDS |
| GAAGGTTGATTATTTGGCTA+AGG | 0.473509 | 8.4:-3387967 | MS.gene57980:CDS |
| TGGAGCTCCAGTCATGTTTG+TGG | 0.474210 | 8.4:-3384703 | MS.gene57980:CDS |
| CCAACAAATAAGACCAGGTC+AGG | 0.474859 | 8.4:+3385337 | None:intergenic |
| TTTGTTGGAGTTAATGGAGT+TGG | 0.477015 | 8.4:-3386538 | MS.gene57980:CDS |
| TGGAAGGGAGATGGATCTGA+TGG | 0.483093 | 8.4:-3388377 | MS.gene57980:CDS |
| AAGGATATCTTCCACAGTGC+AGG | 0.486091 | 8.4:-3386772 | MS.gene57980:intron |
| AAAATCTCGATACACGGTTC+TGG | 0.486570 | 8.4:+3388505 | None:intergenic |
| AAAATCTAACTTAGTTTCAA+CGG | 0.490122 | 8.4:+3388031 | None:intergenic |
| GAGCTGCTTATTCTCTCAAA+TGG | 0.492519 | 8.4:-3388649 | MS.gene57980:CDS |
| ATGGGGATGCTGATAAGGAT+AGG | 0.493111 | 8.4:-3387989 | MS.gene57980:CDS |
| CTTATTTGTTGGAGAAGCAC+TGG | 0.493495 | 8.4:-3385326 | MS.gene57980:CDS |
| GCTTGTGATACATTTCGATC+AGG | 0.496091 | 8.4:-3386343 | MS.gene57980:CDS |
| GTTAGGAATAAAGGCGGGAA+TGG | 0.496788 | 8.4:-3388131 | MS.gene57980:CDS |
| TGTAAATAGGCTCCAGAAGA+AGG | 0.499134 | 8.4:-3388153 | MS.gene57980:CDS |
| ATCTCGATACACGGTTCTGG+TGG | 0.501240 | 8.4:+3388508 | None:intergenic |
| GATGATGAGGATGATGATGC+TGG | 0.501399 | 8.4:-3387876 | MS.gene57980:CDS |
| GCGTTCTATTGACATATTGA+GGG | 0.507989 | 8.4:-3386605 | MS.gene57980:CDS |
| AGACCAGGTCAGGATTGTTA+AGG | 0.512658 | 8.4:+3385347 | None:intergenic |
| CTATTCCCACCTACAACCAC+CGG | 0.515311 | 8.4:+3388416 | None:intergenic |
| CCAGTCATGTTTGTGGGATG+CGG | 0.515363 | 8.4:-3384696 | MS.gene57980:CDS |
| TCAGATCCCTATATTTGAGA+AGG | 0.520704 | 8.4:-3386202 | MS.gene57980:intron |
| CTACACCCAGATTGATTGAT+GGG | 0.521118 | 8.4:-3385134 | MS.gene57980:CDS |
| ACGGTAACGGTTATAATTTG+AGG | 0.521482 | 8.4:-3388247 | MS.gene57980:CDS |
| CAGGAGCTGTTGAGCAGTTG+CGG | 0.524608 | 8.4:-3386324 | MS.gene57980:CDS |
| GAAATTGGCAACGCTTTGAA+AGG | 0.527215 | 8.4:-3388752 | MS.gene57980:CDS |
| GGAGCTCCAGTCATGTTTGT+GGG | 0.528002 | 8.4:-3384702 | MS.gene57980:CDS |
| CAGATCCCTATATTTGAGAA+GGG | 0.528857 | 8.4:-3386201 | MS.gene57980:CDS |
| GACGTTGAGTTTCTTGAGGT+CGG | 0.531116 | 8.4:+3384662 | None:intergenic |
| AAGCAATTCAGGAAGCTTCA+CGG | 0.533244 | 8.4:-3386146 | MS.gene57980:CDS |
| GGCGGCAATGGAAGATGCAC+TGG | 0.533895 | 8.4:-3386647 | MS.gene57980:CDS |
| CGACACAGCTGGTCGTATGC+AGG | 0.535402 | 8.4:-3386100 | MS.gene57980:intron |
| ATTCAGGAAGCTTCACGGAA+TGG | 0.540152 | 8.4:-3386141 | MS.gene57980:CDS |
| GGAACAAGGTGAGAGTATGA+TGG | 0.543614 | 8.4:-3387946 | MS.gene57980:CDS |
| TCGAATCCGGTGGTTGTAGG+TGG | 0.545919 | 8.4:-3388422 | MS.gene57980:CDS |
| TGTGCTCAGTATTGCTGGGA+AGG | 0.545968 | 8.4:-3387061 | MS.gene57980:intron |
| GATTCGATCTTGTCTTCTAG+AGG | 0.546611 | 8.4:-3388711 | MS.gene57980:CDS |
| TGTCTTCTAGAGGAGCGATC+TGG | 0.547527 | 8.4:-3388701 | MS.gene57980:CDS |
| GGATTTGAAGAAATCGAATC+CGG | 0.550640 | 8.4:-3388435 | MS.gene57980:CDS |
| CAATCTGGGTGTAGGAGATG+TGG | 0.553386 | 8.4:+3385143 | None:intergenic |
| AAAATCTACTAATCTTGCTA+AGG | 0.553829 | 8.4:-3386515 | MS.gene57980:intron |
| CAGGTGACATGGAAGGGAGA+TGG | 0.559417 | 8.4:-3388386 | MS.gene57980:CDS |
| CCGCATCCCACAAACATGAC+TGG | 0.559796 | 8.4:+3384696 | None:intergenic |
| ACCAGCTTTGAAAGCTCTGA+AGG | 0.559926 | 8.4:-3387013 | MS.gene57980:CDS |
| TTGAGAGAATAAGCAGCTCC+AGG | 0.560375 | 8.4:+3388653 | None:intergenic |
| AAACAGCAGGTGACATGGAA+GGG | 0.561061 | 8.4:-3388392 | MS.gene57980:CDS |
| GATTATTTGGCTAAGGAACA+AGG | 0.566749 | 8.4:-3387960 | MS.gene57980:CDS |
| GTTATTGTGAATAACGGTAA+CGG | 0.570694 | 8.4:-3388260 | MS.gene57980:CDS |
| CAATTTCATTGCATGACCAG+AGG | 0.575171 | 8.4:+3388768 | None:intergenic |
| GGATGCTGATAAGGATAGGA+AGG | 0.575386 | 8.4:-3387985 | MS.gene57980:CDS |
| GCAGTTGAAGATTGAAGCTG+AGG | 0.579144 | 8.4:-3388468 | MS.gene57980:CDS |
| AAGATCCCATCAATCAATCT+GGG | 0.579799 | 8.4:+3385129 | None:intergenic |
| CCATCAATCAATCTGGGTGT+AGG | 0.581937 | 8.4:+3385135 | None:intergenic |
| TGAAGCTGAGGCTCGTTCTG+AGG | 0.584141 | 8.4:-3388456 | MS.gene57980:CDS |
| ACTTGACGTTGAGTTTCTTG+AGG | 0.584980 | 8.4:+3384658 | None:intergenic |
| GAAACAGCAGGTGACATGGA+AGG | 0.585391 | 8.4:-3388393 | MS.gene57980:CDS |
| GGGAAGAAGAATGCCAGTGC+TGG | 0.586484 | 8.4:-3388356 | MS.gene57980:CDS |
| CTGATCAAAATCTCGATACA+CGG | 0.587720 | 8.4:+3388499 | None:intergenic |
| CTACCTTAACAATCCTGACC+TGG | 0.587728 | 8.4:-3385350 | MS.gene57980:CDS |
| TTTGTTGGAGAAGCACTGGT+TGG | 0.588986 | 8.4:-3385322 | MS.gene57980:CDS |
| GGTTATAATTTGAGGAGTAA+CGG | 0.590987 | 8.4:-3388239 | MS.gene57980:CDS |
| ATAGGAAACAGCAGGTGACA+TGG | 0.591167 | 8.4:-3388397 | MS.gene57980:CDS |
| GTTTGAAGAATGACGGTGAT+GGG | 0.596520 | 8.4:-3388319 | MS.gene57980:CDS |
| TGTTAAGCGTGAATTCTCGC+AGG | 0.597191 | 8.4:-3388540 | MS.gene57980:CDS |
| TTTAAGGAGCGTCTTCACAA+TGG | 0.598414 | 8.4:+3384635 | None:intergenic |
| TGCTTGTGCTCAGTATTGCT+GGG | 0.598645 | 8.4:-3387065 | MS.gene57980:intron |
| CGAATCCGGTGGTTGTAGGT+GGG | 0.598863 | 8.4:-3388421 | MS.gene57980:CDS |
| AGGTGGGAATAGGAAACAGC+AGG | 0.600879 | 8.4:-3388405 | MS.gene57980:CDS |
| AATTCTGCATCTGCTCTATG+TGG | 0.603688 | 8.4:-3388579 | MS.gene57980:CDS |
| TGAAGAGGATGATGATGATG+AGG | 0.607270 | 8.4:-3387889 | MS.gene57980:CDS |
| TTCATGCTGCAAAAGAGCAA+AGG | 0.608654 | 8.4:-3386579 | MS.gene57980:CDS |
| ATGATGAGGATGATGATGCT+GGG | 0.610615 | 8.4:-3387875 | MS.gene57980:CDS |
| ACACAATGTTAATGTCATGA+TGG | 0.611925 | 8.4:-3386368 | MS.gene57980:CDS |
| GAGAATGATAGTGTAAACAA+TGG | 0.612652 | 8.4:-3388185 | MS.gene57980:CDS |
| GATCGAATCAATGTATCGAT+CGG | 0.617091 | 8.4:+3388725 | None:intergenic |
| CTTCTCCAACAAATAAGACC+AGG | 0.622372 | 8.4:+3385332 | None:intergenic |
| GTTGTGCTAGTCGACACAGC+TGG | 0.625758 | 8.4:-3386111 | MS.gene57980:CDS |
| TCTTACAATTACGATGCACC+TGG | 0.626789 | 8.4:-3388671 | MS.gene57980:CDS |
| TCTCGATACACGGTTCTGGT+GGG | 0.628791 | 8.4:+3388509 | None:intergenic |
| AACAGACGCTGTTGTAACCA+AGG | 0.629920 | 8.4:-3388102 | MS.gene57980:CDS |
| AAGAATGCCAGTGCTGGTGG+TGG | 0.631319 | 8.4:-3388350 | MS.gene57980:CDS |
| GGAAGGGAGATGGATCTGAT+GGG | 0.633548 | 8.4:-3388376 | MS.gene57980:CDS |
| GAAGGCCAATTTGGAGAAGT+CGG | 0.633774 | 8.4:-3387043 | MS.gene57980:CDS |
| GGTTTGAAGAATGACGGTGA+TGG | 0.634038 | 8.4:-3388320 | MS.gene57980:CDS |
| AGAAGGTTAGGAATAAAGGC+GGG | 0.636662 | 8.4:-3388136 | MS.gene57980:CDS |
| CGTTATTCACAATAACAGAA+CGG | 0.639458 | 8.4:+3388267 | None:intergenic |
| GGCGGTGGTTTGAAGAATGA+CGG | 0.640321 | 8.4:-3388326 | MS.gene57980:CDS |
| TGAGAAGCTATGTGAATCAG+TGG | 0.640944 | 8.4:-3386832 | MS.gene57980:CDS |
| TCAGCTTTCAAAGTTCAACC+AGG | 0.642481 | 8.4:-3385284 | MS.gene57980:intron |
| AAGAAGAATGCCAGTGCTGG+TGG | 0.643037 | 8.4:-3388353 | MS.gene57980:CDS |
| TGGGTGTAGGAGATGTGGAA+AGG | 0.654736 | 8.4:+3385148 | None:intergenic |
| TAGACTCATGACCAAGAATG+TGG | 0.655583 | 8.4:-3386989 | MS.gene57980:intron |
| GGATCATGTTGATGTTGATG+GGG | 0.663445 | 8.4:-3388006 | MS.gene57980:CDS |
| TTTGAAGAAATCGAATCCGG+TGG | 0.670497 | 8.4:-3388432 | MS.gene57980:CDS |
| TCTAGAGGAGCGATCTGGTG+CGG | 0.676914 | 8.4:-3388696 | MS.gene57980:CDS |
| AAGAAGGTTAGGAATAAAGG+CGG | 0.679488 | 8.4:-3388137 | MS.gene57980:CDS |
| AATATGTCAATAGAACGCCT+AGG | 0.693947 | 8.4:+3386610 | None:intergenic |
| TAGAAACCAAACCTGCACTG+TGG | 0.728001 | 8.4:+3386761 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAATTGTATATAAATAAA+AGG | + | chr8.4:3386740-3386759 | None:intergenic | 10.0% |
| !! | ATAAATTAAATTGTTACTCT+TGG | - | chr8.4:3386112-3386131 | MS.gene57980:CDS | 15.0% |
| !! | ATTGTATATAAATAAAAGGT+CGG | + | chr8.4:3386736-3386755 | None:intergenic | 15.0% |
| !!! | TATTTAACTTGTAATGATAT+TGG | - | chr8.4:3386017-3386036 | MS.gene57980:intron | 15.0% |
| !! | AAAAGGTAGTTAAGAAAAAT+AGG | - | chr8.4:3385376-3385395 | MS.gene57980:CDS | 20.0% |
| !! | AAAATCTAACTTAGTTTCAA+CGG | + | chr8.4:3385418-3385437 | None:intergenic | 20.0% |
| !! | AAAGGTAGTTAAGAAAAATA+GGG | - | chr8.4:3385377-3385396 | MS.gene57980:CDS | 20.0% |
| !! | TAATCATTACCCATATTAAA+TGG | + | chr8.4:3388473-3388492 | None:intergenic | 20.0% |
| !! | TATTCTTGATGAACATTTAT+TGG | - | chr8.4:3388427-3388446 | MS.gene57980:CDS | 20.0% |
| !! | TCAATTCCAATAAACATAAA+AGG | + | chr8.4:3387924-3387943 | None:intergenic | 20.0% |
| !!! | AAAAGTTTATTGGTTTTATG+GGG | - | chr8.4:3387394-3387413 | MS.gene57980:intron | 20.0% |
| !!! | AAACAATAAAAGTATTGTCA+AGG | + | chr8.4:3385867-3385886 | None:intergenic | 20.0% |
| !!! | AATGAACCTTTTATGTTTAT+TGG | - | chr8.4:3387915-3387934 | MS.gene57980:CDS | 20.0% |
| !!! | CAAAAGTTTATTGGTTTTAT+GGG | - | chr8.4:3387393-3387412 | MS.gene57980:intron | 20.0% |
| !!! | TAATTATGTTTGATTTTGTC+AGG | - | chr8.4:3388689-3388708 | MS.gene57980:CDS | 20.0% |
| !!! | TGAAACTAAGTTAGATTTTA+CGG | - | chr8.4:3385419-3385438 | MS.gene57980:intron | 20.0% |
| !!! | TTTTATGTTTATTGGAATTG+AGG | - | chr8.4:3387923-3387942 | MS.gene57980:CDS | 20.0% |
| !!! | TTTTTCTTAACTACCTTTTT+CGG | + | chr8.4:3385375-3385394 | None:intergenic | 20.0% |
| ! | AAAATCTACTAATCTTGCTA+AGG | - | chr8.4:3386931-3386950 | MS.gene57980:intron | 25.0% |
| ! | AAATCTAACTTAGTTTCAAC+GGG | + | chr8.4:3385417-3385436 | None:intergenic | 25.0% |
| ! | AACTAGCAAAGACAAAATAA+AGG | + | chr8.4:3388585-3388604 | None:intergenic | 25.0% |
| ! | ACTAGCAAAGACAAAATAAA+GGG | + | chr8.4:3388584-3388603 | None:intergenic | 25.0% |
| ! | AGACAAAAAAATCCAATTCA+AGG | + | chr8.4:3385819-3385838 | None:intergenic | 25.0% |
| ! | AGTGTTATATTTCCTTGAAT+TGG | - | chr8.4:3385804-3385823 | MS.gene57980:intron | 25.0% |
| ! | AGTTAAGAAAAATAGGGTTT+GGG | - | chr8.4:3385383-3385402 | MS.gene57980:CDS | 25.0% |
| ! | AGTTTCTGCAACAAAATAAA+TGG | + | chr8.4:3388272-3388291 | None:intergenic | 25.0% |
| ! | ATAAATACATACCACATTCT+TGG | + | chr8.4:3386471-3386490 | None:intergenic | 25.0% |
| ! | CAACTTTGCAAGTAAATTTA+TGG | - | chr8.4:3388391-3388410 | MS.gene57980:CDS | 25.0% |
| ! | GAATAAGTGCATAAAAGATT+GGG | + | chr8.4:3387648-3387667 | None:intergenic | 25.0% |
| ! | GTTTCTGCAACAAAATAAAT+GGG | + | chr8.4:3388271-3388290 | None:intergenic | 25.0% |
| ! | TAAATTTATGGCTATGCATT+TGG | - | chr8.4:3388403-3388422 | MS.gene57980:CDS | 25.0% |
| ! | TAAGACATATGTGCATTATT+AGG | - | chr8.4:3385984-3386003 | MS.gene57980:intron | 25.0% |
| ! | TAGAATGAATGGATATTAAG+TGG | - | chr8.4:3387610-3387629 | MS.gene57980:intron | 25.0% |
| ! | TAGTTAAGAAAAATAGGGTT+TGG | - | chr8.4:3385382-3385401 | MS.gene57980:CDS | 25.0% |
| ! | TTCGTTAGTCAATATAAAAC+CGG | + | chr8.4:3387481-3387500 | None:intergenic | 25.0% |
| ! | TTGTTGAAGCAAAAGTTTAT+TGG | - | chr8.4:3387384-3387403 | MS.gene57980:intron | 25.0% |
| !! | AATACTATTGGTTATCTGTT+AGG | - | chr8.4:3387440-3387459 | MS.gene57980:intron | 25.0% |
| !!! | AAAGTTTATTGGTTTTATGG+GGG | - | chr8.4:3387395-3387414 | MS.gene57980:intron | 25.0% |
| !!! | ATTTATTTTGTTGCAGAAAC+TGG | - | chr8.4:3388271-3388290 | MS.gene57980:CDS | 25.0% |
| !!! | CTGCATTATTTTTCAAAACA+CGG | + | chr8.4:3386780-3386799 | None:intergenic | 25.0% |
| !!! | GCAAAAGTTTATTGGTTTTA+TGG | - | chr8.4:3387392-3387411 | MS.gene57980:intron | 25.0% |
| !!! | GTTTTATATTGACTAACGAA+AGG | - | chr8.4:3387481-3387500 | MS.gene57980:intron | 25.0% |
| !!! | TTACTAACTTCTAGAATGAA+TGG | - | chr8.4:3387599-3387618 | MS.gene57980:intron | 25.0% |
| AAAGACAAAATAAAGGGAAG+GGG | + | chr8.4:3388578-3388597 | None:intergenic | 30.0% | |
| AATTACACTCTAAACTTCCT+TGG | - | chr8.4:3385929-3385948 | MS.gene57980:intron | 30.0% | |
| ACACAATGTTAATGTCATGA+TGG | - | chr8.4:3387078-3387097 | MS.gene57980:intron | 30.0% | |
| ACCAAATGACTCAATACTAT+TGG | - | chr8.4:3387428-3387447 | MS.gene57980:intron | 30.0% | |
| AGTAACTGTTTCATTCAGTT+AGG | + | chr8.4:3387584-3387603 | None:intergenic | 30.0% | |
| ATGAATAAGATTTCAACCCA+AGG | + | chr8.4:3385949-3385968 | None:intergenic | 30.0% | |
| ATGATAAGGTATGCAAATAC+TGG | - | chr8.4:3388363-3388382 | MS.gene57980:CDS | 30.0% | |
| ATTACACTCTAAACTTCCTT+GGG | - | chr8.4:3385930-3385949 | MS.gene57980:intron | 30.0% | |
| ATTAGAGGTTCCATTTCTTA+AGG | + | chr8.4:3387683-3387702 | None:intergenic | 30.0% | |
| CAAAGACAAAATAAAGGGAA+GGG | + | chr8.4:3388579-3388598 | None:intergenic | 30.0% | |
| CATAACCCTTCTCAAATATA+GGG | + | chr8.4:3387253-3387272 | None:intergenic | 30.0% | |
| CCAACAAATACAACAACATA+TGG | + | chr8.4:3386896-3386915 | None:intergenic | 30.0% | |
| CCATATGTTGTTGTATTTGT+TGG | - | chr8.4:3386893-3386912 | MS.gene57980:intron | 30.0% | |
| CGTTATTCACAATAACAGAA+CGG | + | chr8.4:3385182-3385201 | None:intergenic | 30.0% | |
| CGTTCTGTTATTGTGAATAA+CGG | - | chr8.4:3385180-3385199 | MS.gene57980:intron | 30.0% | |
| CTTGATGAACATTTATTGGT+TGG | - | chr8.4:3388431-3388450 | MS.gene57980:CDS | 30.0% | |
| CTTTCAATGGTTTACATATC+TGG | - | chr8.4:3388723-3388742 | MS.gene57980:CDS | 30.0% | |
| GGAAAATTGTCATAGTTGAA+TGG | - | chr8.4:3387944-3387963 | MS.gene57980:CDS | 30.0% | |
| GGAATAAGTGCATAAAAGAT+TGG | + | chr8.4:3387649-3387668 | None:intergenic | 30.0% | |
| GGTTATAATTTGAGGAGTAA+CGG | - | chr8.4:3385207-3385226 | MS.gene57980:intron | 30.0% | |
| GTTATTGTGAATAACGGTAA+CGG | - | chr8.4:3385186-3385205 | MS.gene57980:intron | 30.0% | |
| TAATGATGATTTACTGCAAG+TGG | - | chr8.4:3385893-3385912 | MS.gene57980:intron | 30.0% | |
| TATAAAACCGGTATTAATCC+CGG | + | chr8.4:3387469-3387488 | None:intergenic | 30.0% | |
| TATGTAAAAATTCCGTACGT+CGG | - | chr8.4:3386984-3387003 | MS.gene57980:intron | 30.0% | |
| TCAAATATAGGGATCTGAAA+GGG | + | chr8.4:3387242-3387261 | None:intergenic | 30.0% | |
| TCATAACCCTTCTCAAATAT+AGG | + | chr8.4:3387254-3387273 | None:intergenic | 30.0% | |
| TGAATAAATTGAACCTAACC+TGG | + | chr8.4:3388183-3388202 | None:intergenic | 30.0% | |
| TTAGAGGTTCCATTTCTTAA+GGG | + | chr8.4:3387682-3387701 | None:intergenic | 30.0% | |
| ! | AAAAACTGGCTTCATTTACA+AGG | - | chr8.4:3386655-3386674 | MS.gene57980:intron | 30.0% |
| ! | ACCAATAGTATTGAGTCATT+TGG | + | chr8.4:3387432-3387451 | None:intergenic | 30.0% |
| ! | ATGGAGCTTTTGATGTAAAT+AGG | - | chr8.4:3385280-3385299 | MS.gene57980:intron | 30.0% |
| ! | CTATTTCTTGCGAATGAAAT+TGG | + | chr8.4:3388636-3388655 | None:intergenic | 30.0% |
| ! | GAGAATGATAGTGTAAACAA+TGG | - | chr8.4:3385261-3385280 | MS.gene57980:intron | 30.0% |
| ! | GTTGTATTTGTTGGAGTTAA+TGG | - | chr8.4:3386902-3386921 | MS.gene57980:intron | 30.0% |
| ! | TTGTCATAGTTGAATGGTTT+TGG | - | chr8.4:3387950-3387969 | MS.gene57980:CDS | 30.0% |
| !! | GTTGGTAATGTTAGTGTAAA+TGG | - | chr8.4:3385234-3385253 | MS.gene57980:intron | 30.0% |
| !! | TATGTTTGATTTTGTCAGGT+GGG | - | chr8.4:3388693-3388712 | MS.gene57980:CDS | 30.0% |
| !! | TTATGTTTGATTTTGTCAGG+TGG | - | chr8.4:3388692-3388711 | MS.gene57980:CDS | 30.0% |
| !!! | CGTGTTTTGAAAAATAATGC+AGG | - | chr8.4:3386778-3386797 | MS.gene57980:CDS | 30.0% |
| !!! | GTTTTGAAAAATAATGCAGG+CGG | - | chr8.4:3386781-3386800 | MS.gene57980:CDS | 30.0% |
| AAATATAGGGATCTGAAAGG+GGG | + | chr8.4:3387240-3387259 | None:intergenic | 35.0% | |
| AACAGAATCCCCTTAAGAAA+TGG | - | chr8.4:3387670-3387689 | MS.gene57980:intron | 35.0% | |
| AACATCAATCGGAATCTATG+AGG | + | chr8.4:3385763-3385782 | None:intergenic | 35.0% | |
| AACTGTTTCATTCAGTTAGG+CGG | + | chr8.4:3387581-3387600 | None:intergenic | 35.0% | |
| AAGAAGGTTAGGAATAAAGG+CGG | - | chr8.4:3385309-3385328 | MS.gene57980:CDS | 35.0% | |
| AAGACAAAATAAAGGGAAGG+GGG | + | chr8.4:3388577-3388596 | None:intergenic | 35.0% | |
| AAGATCCCATCAATCAATCT+GGG | + | chr8.4:3388320-3388339 | None:intergenic | 35.0% | |
| AAGCCTGATGCTAAAAAGAA+GGG | - | chr8.4:3385603-3385622 | MS.gene57980:intron | 35.0% | |
| AAGTCTTGAAGGCAAAAAAC+TGG | - | chr8.4:3386641-3386660 | MS.gene57980:CDS | 35.0% | |
| AAGTGCATAAAAGATTGGGA+GGG | + | chr8.4:3387644-3387663 | None:intergenic | 35.0% | |
| AATATGTCAATAGAACGCCT+AGG | + | chr8.4:3386839-3386858 | None:intergenic | 35.0% | |
| ATAAAACCGGTATTAATCCC+GGG | + | chr8.4:3387468-3387487 | None:intergenic | 35.0% | |
| ATCCTCAACATCATTAGATG+TGG | - | chr8.4:3386489-3386508 | MS.gene57980:intron | 35.0% | |
| ATCTGAAAGGGGGAATTATA+AGG | + | chr8.4:3387230-3387249 | None:intergenic | 35.0% | |
| ATGTAAAAATTCCGTACGTC+GGG | - | chr8.4:3386985-3387004 | MS.gene57980:intron | 35.0% | |
| ATTCATTCGATGCTTTCTTG+TGG | + | chr8.4:3388513-3388532 | None:intergenic | 35.0% | |
| ATTCGTTTGAAAGTCAGGAA+AGG | - | chr8.4:3386041-3386060 | MS.gene57980:intron | 35.0% | |
| CAAATATAGGGATCTGAAAG+GGG | + | chr8.4:3387241-3387260 | None:intergenic | 35.0% | |
| CAATCAAAGCAACATGTAAG+AGG | + | chr8.4:3386152-3386171 | None:intergenic | 35.0% | |
| CAGAAGAAGGTTAGGAATAA+AGG | - | chr8.4:3385306-3385325 | MS.gene57980:CDS | 35.0% | |
| CAGATCCCTATATTTGAGAA+GGG | - | chr8.4:3387245-3387264 | MS.gene57980:intron | 35.0% | |
| CTATCACTGTTTCAGTTTCT+AGG | - | chr8.4:3387865-3387884 | MS.gene57980:CDS | 35.0% | |
| CTCAAATATAGGGATCTGAA+AGG | + | chr8.4:3387243-3387262 | None:intergenic | 35.0% | |
| CTGATCAAAATCTCGATACA+CGG | + | chr8.4:3384950-3384969 | None:intergenic | 35.0% | |
| CTGCATAATCACACAGAAAA+TGG | + | chr8.4:3387038-3387057 | None:intergenic | 35.0% | |
| CTTTATTCCTAACCTTCTTC+TGG | + | chr8.4:3385308-3385327 | None:intergenic | 35.0% | |
| GAAAATGGAATATCTCCTTC+AGG | + | chr8.4:3387023-3387042 | None:intergenic | 35.0% | |
| GATTATTTGGCTAAGGAACA+AGG | - | chr8.4:3385486-3385505 | MS.gene57980:intron | 35.0% | |
| GCAAAGACAAAATAAAGGGA+AGG | + | chr8.4:3388580-3388599 | None:intergenic | 35.0% | |
| GCACATATGTCTTAAAGCAA+AGG | + | chr8.4:3385978-3385997 | None:intergenic | 35.0% | |
| GCGTTCTATTGACATATTGA+GGG | - | chr8.4:3386841-3386860 | MS.gene57980:CDS | 35.0% | |
| GGAGACTGTCCATTTAATAT+GGG | - | chr8.4:3388461-3388480 | MS.gene57980:CDS | 35.0% | |
| GGATTTGAAGAAATCGAATC+CGG | - | chr8.4:3385011-3385030 | MS.gene57980:intron | 35.0% | |
| GGGTTCAATAACAGACTTAT+GGG | + | chr8.4:3388251-3388270 | None:intergenic | 35.0% | |
| TAAGTGCATAAAAGATTGGG+AGG | + | chr8.4:3387645-3387664 | None:intergenic | 35.0% | |
| TACTAATCTTGCTAAGGTGA+AGG | - | chr8.4:3386937-3386956 | MS.gene57980:intron | 35.0% | |
| TAGAGGTTCCATTTCTTAAG+GGG | + | chr8.4:3387681-3387700 | None:intergenic | 35.0% | |
| TCAAGCAACACAACATCAAT+CGG | + | chr8.4:3385774-3385793 | None:intergenic | 35.0% | |
| TCAATCAAAGTAGCAGATCA+AGG | + | chr8.4:3386268-3386287 | None:intergenic | 35.0% | |
| TCACAAGGAAAATGGAAACA+GGG | + | chr8.4:3386202-3386221 | None:intergenic | 35.0% | |
| TCAGATCCCTATATTTGAGA+AGG | - | chr8.4:3387244-3387263 | MS.gene57980:intron | 35.0% | |
| TCATGGCCCATTTCATTATT+GGG | - | chr8.4:3387832-3387851 | MS.gene57980:CDS | 35.0% | |
| TGAGATGGAAACAAAATCAG+CGG | + | chr8.4:3388541-3388560 | None:intergenic | 35.0% | |
| TGGGTTCAATAACAGACTTA+TGG | + | chr8.4:3388252-3388271 | None:intergenic | 35.0% | |
| TTCATCTTACATGTCACTGA+TGG | - | chr8.4:3388028-3388047 | MS.gene57980:CDS | 35.0% | |
| TTCATGGCCCATTTCATTAT+TGG | - | chr8.4:3387831-3387850 | MS.gene57980:CDS | 35.0% | |
| TTGGTATTCGTTTGAAAGTC+AGG | - | chr8.4:3386036-3386055 | MS.gene57980:intron | 35.0% | |
| TTTCAAAGTTCAACCAGGTT+AGG | - | chr8.4:3388167-3388186 | MS.gene57980:CDS | 35.0% | |
| TTTCTTAAGGGGATTCTGTT+AGG | + | chr8.4:3387670-3387689 | None:intergenic | 35.0% | |
| TTTGTTGGAGTTAATGGAGT+TGG | - | chr8.4:3386908-3386927 | MS.gene57980:intron | 35.0% | |
| ! | ACGGTAACGGTTATAATTTG+AGG | - | chr8.4:3385199-3385218 | MS.gene57980:intron | 35.0% |
| ! | AGCTTTGTCCAACTACAATT+GGG | - | chr8.4:3388208-3388227 | MS.gene57980:CDS | 35.0% |
| ! | CATTTTCTGTGTGATTATGC+AGG | - | chr8.4:3387036-3387055 | MS.gene57980:CDS | 35.0% |
| ! | GAAGGTTGATTATTTGGCTA+AGG | - | chr8.4:3385479-3385498 | MS.gene57980:intron | 35.0% |
| ! | GATCGAATCAATGTATCGAT+CGG | + | chr8.4:3384724-3384743 | None:intergenic | 35.0% |
| ! | GGATAGGAAGGTTGATTATT+TGG | - | chr8.4:3385473-3385492 | MS.gene57980:intron | 35.0% |
| ! | GTTCGACACTATTGATGATA+AGG | - | chr8.4:3388349-3388368 | MS.gene57980:CDS | 35.0% |
| ! | TGAACATTTATTGGTTGGCT+AGG | - | chr8.4:3388436-3388455 | MS.gene57980:CDS | 35.0% |
| ! | TGGACTTTTCACAATGATCT+AGG | - | chr8.4:3384817-3384836 | MS.gene57980:intron | 35.0% |
| ! | TGTTTCCATTTTCCTTGTGA+CGG | - | chr8.4:3386202-3386221 | MS.gene57980:intron | 35.0% |
| !! | TAGCTTTGTCCAACTACAAT+TGG | - | chr8.4:3388207-3388226 | MS.gene57980:CDS | 35.0% |
| !! | TTACATTCTGTGTCACTTGT+AGG | - | chr8.4:3386578-3386597 | MS.gene57980:CDS | 35.0% |
| !!! | CAGTTACTGATTTTCACAAG+AGG | - | chr8.4:3384646-3384665 | MS.gene57980:CDS | 35.0% |
| !!! | GATTTTTAGTAGTGACAGTG+AGG | - | chr8.4:3385533-3385552 | MS.gene57980:intron | 35.0% |
| !!! | TGGTTCGTATTTTAACTCCT+AGG | - | chr8.4:3386819-3386838 | MS.gene57980:CDS | 35.0% |
| !!! | TTACTGATTTTCACAAGAGG+AGG | - | chr8.4:3384649-3384668 | MS.gene57980:CDS | 35.0% |
| AAAAATAATGCAGGCGGCAA+TGG | - | chr8.4:3386787-3386806 | MS.gene57980:CDS | 40.0% | |
| AAAATCTCGATACACGGTTC+TGG | + | chr8.4:3384944-3384963 | None:intergenic | 40.0% | |
| AAATTGAGCCACGCTCTTAT+AGG | - | chr8.4:3387504-3387523 | MS.gene57980:intron | 40.0% | |
| AAGCAATTCAGGAAGCTTCA+CGG | - | chr8.4:3387300-3387319 | MS.gene57980:intron | 40.0% | |
| AAGTTCAGCAAGTTTACCTC+TGG | + | chr8.4:3385647-3385666 | None:intergenic | 40.0% | |
| AATTCTGCATCTGCTCTATG+TGG | - | chr8.4:3384867-3384886 | MS.gene57980:intron | 40.0% | |
| ACGGATCATGTTGATGTTGA+TGG | - | chr8.4:3385438-3385457 | MS.gene57980:intron | 40.0% | |
| ACTTGACGTTGAGTTTCTTG+AGG | + | chr8.4:3388791-3388810 | None:intergenic | 40.0% | |
| AGAAGACTTAAGAGAGCTGA+TGG | + | chr8.4:3387719-3387738 | None:intergenic | 40.0% | |
| AGAAGGTTAGGAATAAAGGC+GGG | - | chr8.4:3385310-3385329 | MS.gene57980:CDS | 40.0% | |
| AGTAGGATATTCCTCTCTGA+AGG | + | chr8.4:3387558-3387577 | None:intergenic | 40.0% | |
| AGTATAGAGTATACCCTCCA+AGG | - | chr8.4:3387772-3387791 | MS.gene57980:intron | 40.0% | |
| CAAGATCCCATCAATCAATC+TGG | + | chr8.4:3388321-3388340 | None:intergenic | 40.0% | |
| CAAGCCTGATGCTAAAAAGA+AGG | - | chr8.4:3385602-3385621 | MS.gene57980:intron | 40.0% | |
| CAATTTCATTGCATGACCAG+AGG | + | chr8.4:3384681-3384700 | None:intergenic | 40.0% | |
| CACCACATCTAATGATGTTG+AGG | + | chr8.4:3386494-3386513 | None:intergenic | 40.0% | |
| CGGAGACTGTCCATTTAATA+TGG | - | chr8.4:3388460-3388479 | MS.gene57980:CDS | 40.0% | |
| CGGATCATGTTGATGTTGAT+GGG | - | chr8.4:3385439-3385458 | MS.gene57980:intron | 40.0% | |
| CTACACCCAGATTGATTGAT+GGG | - | chr8.4:3388312-3388331 | MS.gene57980:CDS | 40.0% | |
| CTCAACATCATTAGATGTGG+TGG | - | chr8.4:3386492-3386511 | MS.gene57980:intron | 40.0% | |
| CTCTGGTCATGCAATGAAAT+TGG | - | chr8.4:3384679-3384698 | MS.gene57980:CDS | 40.0% | |
| CTGATGCTAAAAAGAAGGGT+TGG | - | chr8.4:3385607-3385626 | MS.gene57980:intron | 40.0% | |
| CTGGAGCCCAATAATGAAAT+GGG | + | chr8.4:3387841-3387860 | None:intergenic | 40.0% | |
| CTTCTCCAACAAATAAGACC+AGG | + | chr8.4:3388117-3388136 | None:intergenic | 40.0% | |
| GAGCTGCTTATTCTCTCAAA+TGG | - | chr8.4:3384797-3384816 | MS.gene57980:intron | 40.0% | |
| GATTCGATCTTGTCTTCTAG+AGG | - | chr8.4:3384735-3384754 | MS.gene57980:CDS | 40.0% | |
| GCTTGTGATACATTTCGATC+AGG | - | chr8.4:3387103-3387122 | MS.gene57980:intron | 40.0% | |
| GGATCATGTTGATGTTGATG+GGG | - | chr8.4:3385440-3385459 | MS.gene57980:intron | 40.0% | |
| GGCGTTCTATTGACATATTG+AGG | - | chr8.4:3386840-3386859 | MS.gene57980:CDS | 40.0% | |
| GTACTATCTCTTGACAGCAA+AGG | + | chr8.4:3387891-3387910 | None:intergenic | 40.0% | |
| GTCACAAGGAAAATGGAAAC+AGG | + | chr8.4:3386203-3386222 | None:intergenic | 40.0% | |
| GTTTGAAGAATGACGGTGAT+GGG | - | chr8.4:3385127-3385146 | MS.gene57980:CDS | 40.0% | |
| TAATGAAATGGGCCATGAAG+AGG | + | chr8.4:3387830-3387849 | None:intergenic | 40.0% | |
| TAGACTCATGACCAAGAATG+TGG | - | chr8.4:3386457-3386476 | MS.gene57980:intron | 40.0% | |
| TCAGCTTTCAAAGTTCAACC+AGG | - | chr8.4:3388162-3388181 | MS.gene57980:CDS | 40.0% | |
| TCTTACAATTACGATGCACC+TGG | - | chr8.4:3384775-3384794 | MS.gene57980:intron | 40.0% | |
| TGAAAAAGATCCTGCTGTTG+TGG | - | chr8.4:3387271-3387290 | MS.gene57980:intron | 40.0% | |
| TGAGAAGCTATGTGAATCAG+TGG | - | chr8.4:3386614-3386633 | MS.gene57980:CDS | 40.0% | |
| TGATGATTTACTGCAAGTGG+TGG | - | chr8.4:3385896-3385915 | MS.gene57980:intron | 40.0% | |
| TGATTATGCAGGTTGCTTAC+TGG | - | chr8.4:3387047-3387066 | MS.gene57980:CDS | 40.0% | |
| TGTAAATAGGCTCCAGAAGA+AGG | - | chr8.4:3385293-3385312 | MS.gene57980:CDS | 40.0% | |
| TGTGGCAAAAGAAGCAATTC+AGG | - | chr8.4:3387289-3387308 | MS.gene57980:intron | 40.0% | |
| TTCATGCTGCAAAAGAGCAA+AGG | - | chr8.4:3386867-3386886 | MS.gene57980:intron | 40.0% | |
| TTGGTTATCTGTTAGGAACC+CGG | - | chr8.4:3387447-3387466 | MS.gene57980:intron | 40.0% | |
| TTTGAAGAAATCGAATCCGG+TGG | - | chr8.4:3385014-3385033 | MS.gene57980:intron | 40.0% | |
| TTTGACAGTGCTCTCATCAA+TGG | + | chr8.4:3388070-3388089 | None:intergenic | 40.0% | |
| ! | ACATGTCACTGATGGTTTTC+AGG | - | chr8.4:3388036-3388055 | MS.gene57980:CDS | 40.0% |
| ! | ATGATGAGGATGATGATGCT+GGG | - | chr8.4:3385571-3385590 | MS.gene57980:intron | 40.0% |
| ! | CATTTATTGGTTGGCTAGGA+CGG | - | chr8.4:3388440-3388459 | MS.gene57980:CDS | 40.0% |
| ! | CTTATTTGTTGGAGAAGCAC+TGG | - | chr8.4:3388120-3388139 | MS.gene57980:CDS | 40.0% |
| ! | GAAATTGGCAACGCTTTGAA+AGG | - | chr8.4:3384694-3384713 | MS.gene57980:CDS | 40.0% |
| ! | GGTTTTCATCTATGTTCCAG+AGG | - | chr8.4:3385628-3385647 | MS.gene57980:intron | 40.0% |
| ! | TCTGGAGCCCAATAATGAAA+TGG | + | chr8.4:3387842-3387861 | None:intergenic | 40.0% |
| ! | TGAAGAGGATGATGATGATG+AGG | - | chr8.4:3385557-3385576 | MS.gene57980:intron | 40.0% |
| ! | TTGGAGGGTATACTCTATAC+TGG | + | chr8.4:3387773-3387792 | None:intergenic | 40.0% |
| !! | AATGACGGTGATGGGAAAAA+TGG | - | chr8.4:3385135-3385154 | MS.gene57980:CDS | 40.0% |
| !! | ATGACGGTGATGGGAAAAAT+GGG | - | chr8.4:3385136-3385155 | MS.gene57980:CDS | 40.0% |
| !! | CAACCCTTCTTTTTAGCATC+AGG | + | chr8.4:3385609-3385628 | None:intergenic | 40.0% |
| !! | TTTAAGGAGCGTCTTCACAA+TGG | + | chr8.4:3388814-3388833 | None:intergenic | 40.0% |
| AAACAGCAGGTGACATGGAA+GGG | - | chr8.4:3385054-3385073 | MS.gene57980:intron | 45.0% | |
| AAATCGAATCCGGTGGTTGT+AGG | - | chr8.4:3385021-3385040 | MS.gene57980:intron | 45.0% | |
| AACAGACGCTGTTGTAACCA+AGG | - | chr8.4:3385344-3385363 | MS.gene57980:CDS | 45.0% | |
| AAGGATATCTTCCACAGTGC+AGG | - | chr8.4:3386674-3386693 | MS.gene57980:intron | 45.0% | |
| AGACCAGGTCAGGATTGTTA+AGG | + | chr8.4:3388102-3388121 | None:intergenic | 45.0% | |
| AGAGCTGATGGTTAATGACG+TGG | + | chr8.4:3387707-3387726 | None:intergenic | 45.0% | |
| AGAGTATACCCTCCAAGGTT+TGG | - | chr8.4:3387739-3387758 | MS.gene57980:intron | 45.0% | |
| ATAGGAAACAGCAGGTGACA+TGG | - | chr8.4:3385049-3385068 | MS.gene57980:intron | 45.0% | |
| ATAGGCTCCAGAAGAAGGTT+AGG | - | chr8.4:3385298-3385317 | MS.gene57980:CDS | 45.0% | |
| ATGCTTGTGCTCAGTATTGC+TGG | - | chr8.4:3386380-3386399 | MS.gene57980:CDS | 45.0% | |
| ATGGGGATGCTGATAAGGAT+AGG | - | chr8.4:3385457-3385476 | MS.gene57980:intron | 45.0% | |
| ATTCAGGAAGCTTCACGGAA+TGG | - | chr8.4:3387305-3387324 | MS.gene57980:intron | 45.0% | |
| CAAGAGGAGGATTAATCCTC+TGG | - | chr8.4:3384662-3384681 | MS.gene57980:CDS | 45.0% | |
| CAAGTCCGACTTCTCCAAAT+TGG | + | chr8.4:3386411-3386430 | None:intergenic | 45.0% | |
| CAATTTGGAGAAGTCGGACT+TGG | - | chr8.4:3386409-3386428 | MS.gene57980:intron | 45.0% | |
| CCAACAAATAAGACCAGGTC+AGG | + | chr8.4:3388112-3388131 | None:intergenic | 45.0% | |
| CCACAATCTGATCCTCTTCA+TGG | - | chr8.4:3387815-3387834 | MS.gene57980:intron | 45.0% | |
| CCATCAATCAATCTGGGTGT+AGG | + | chr8.4:3388314-3388333 | None:intergenic | 45.0% | |
| CCATGAAGAGGATCAGATTG+TGG | + | chr8.4:3387818-3387837 | None:intergenic | 45.0% | |
| CCTACACCCAGATTGATTGA+TGG | - | chr8.4:3388311-3388330 | MS.gene57980:CDS | 45.0% | |
| CGATACCGTCACAAGGAAAA+TGG | + | chr8.4:3386210-3386229 | None:intergenic | 45.0% | |
| CTACCTTAACAATCCTGACC+TGG | - | chr8.4:3388096-3388115 | MS.gene57980:CDS | 45.0% | |
| CTGAAACAGTGATAGAGCTC+TGG | + | chr8.4:3387860-3387879 | None:intergenic | 45.0% | |
| GAAGGCCAATTTGGAGAAGT+CGG | - | chr8.4:3386403-3386422 | MS.gene57980:intron | 45.0% | |
| GACGAAGACCCAATTGTAGT+TGG | + | chr8.4:3388219-3388238 | None:intergenic | 45.0% | |
| GACGTTGAGTTTCTTGAGGT+CGG | + | chr8.4:3388787-3388806 | None:intergenic | 45.0% | |
| GAGGATCAGATTGTGGATAC+TGG | + | chr8.4:3387811-3387830 | None:intergenic | 45.0% | |
| GAGTATACCCTCCAAGGTTT+GGG | - | chr8.4:3387740-3387759 | MS.gene57980:intron | 45.0% | |
| GAGTTTCTTGAGGTCGGTAT+AGG | + | chr8.4:3388781-3388800 | None:intergenic | 45.0% | |
| GCAGTTGAAGATTGAAGCTG+AGG | - | chr8.4:3384978-3384997 | MS.gene57980:intron | 45.0% | |
| GGATGCTGATAAGGATAGGA+AGG | - | chr8.4:3385461-3385480 | MS.gene57980:intron | 45.0% | |
| GGTTAATGACGTGGCATTAG+AGG | + | chr8.4:3387698-3387717 | None:intergenic | 45.0% | |
| GGTTTGAAGAATGACGGTGA+TGG | - | chr8.4:3385126-3385145 | MS.gene57980:CDS | 45.0% | |
| GTCGGCATCAAATGTCGATA+GGG | + | chr8.4:3386718-3386737 | None:intergenic | 45.0% | |
| GTTAGGAATAAAGGCGGGAA+TGG | - | chr8.4:3385315-3385334 | MS.gene57980:CDS | 45.0% | |
| TAAAAAGCAAGCCCGACGTA+CGG | + | chr8.4:3386999-3387018 | None:intergenic | 45.0% | |
| TAAAAGATTGGGAGGGTAGC+TGG | + | chr8.4:3387637-3387656 | None:intergenic | 45.0% | |
| TAGAAACCAAACCTGCACTG+TGG | + | chr8.4:3386688-3386707 | None:intergenic | 45.0% | |
| TAGGAACCCGGGATTAATAC+CGG | - | chr8.4:3387459-3387478 | MS.gene57980:intron | 45.0% | |
| TAGTGACAGTGAGGATGAAG+AGG | - | chr8.4:3385542-3385561 | MS.gene57980:intron | 45.0% | |
| TATCTTCCACAGTGCAGGTT+TGG | - | chr8.4:3386679-3386698 | MS.gene57980:intron | 45.0% | |
| TATTGCTGGGAAGGCCAATT+TGG | - | chr8.4:3386394-3386413 | MS.gene57980:intron | 45.0% | |
| TCCTTCAGAGCTTTCAAAGC+TGG | + | chr8.4:3386437-3386456 | None:intergenic | 45.0% | |
| TGCTTGTGCTCAGTATTGCT+GGG | - | chr8.4:3386381-3386400 | MS.gene57980:CDS | 45.0% | |
| TGGTTATCTGTTAGGAACCC+GGG | - | chr8.4:3387448-3387467 | MS.gene57980:intron | 45.0% | |
| TGTTAAGCGTGAATTCTCGC+AGG | - | chr8.4:3384906-3384925 | MS.gene57980:intron | 45.0% | |
| TTCATTCAGTTAGGCGGAGT+AGG | + | chr8.4:3387575-3387594 | None:intergenic | 45.0% | |
| TTGAGAGAATAAGCAGCTCC+AGG | + | chr8.4:3384796-3384815 | None:intergenic | 45.0% | |
| ! | GATGATGAGGATGATGATGC+TGG | - | chr8.4:3385570-3385589 | MS.gene57980:intron | 45.0% |
| ! | GGAACAAGGTGAGAGTATGA+TGG | - | chr8.4:3385500-3385519 | MS.gene57980:intron | 45.0% |
| ! | GTTGCTTTCCTATAAGAGCG+TGG | + | chr8.4:3387515-3387534 | None:intergenic | 45.0% |
| ! | TGTTGATGGGGATGCTGATA+AGG | - | chr8.4:3385452-3385471 | MS.gene57980:intron | 45.0% |
| !! | ACCAGCTTTGAAAGCTCTGA+AGG | - | chr8.4:3386433-3386452 | MS.gene57980:intron | 45.0% |
| !! | CCTGACCTGGTCTTATTTGT+TGG | - | chr8.4:3388109-3388128 | MS.gene57980:CDS | 45.0% |
| !! | CTTCTAGAGTATACCCTCCA+AGG | - | chr8.4:3387734-3387753 | MS.gene57980:intron | 45.0% |
| !! | GAAAGTCAGGAAAGGTGTTG+AGG | - | chr8.4:3386049-3386068 | MS.gene57980:intron | 45.0% |
| !! | TTGAGGAGTAACGGTGTTGT+TGG | - | chr8.4:3385216-3385235 | MS.gene57980:intron | 45.0% |
| !! | TTTGTTGGAGAAGCACTGGT+TGG | - | chr8.4:3388124-3388143 | MS.gene57980:CDS | 45.0% |
| !!! | GGGCTTGCTTTTTAACCTGA+AGG | - | chr8.4:3387005-3387024 | MS.gene57980:CDS | 45.0% |
| AACCAAGGCTGAGCCGAAAA+AGG | - | chr8.4:3385359-3385378 | MS.gene57980:CDS | 50.0% | |
| AGGTGGGAATAGGAAACAGC+AGG | - | chr8.4:3385041-3385060 | MS.gene57980:intron | 50.0% | |
| CAATCTGGGTGTAGGAGATG+TGG | + | chr8.4:3388306-3388325 | None:intergenic | 50.0% | |
| CCAGTCATGTTTGTGGGATG+CGG | - | chr8.4:3388750-3388769 | MS.gene57980:CDS | 50.0% | |
| CCTTGTGACGGTATCGTCTT+GGG | - | chr8.4:3386214-3386233 | MS.gene57980:intron | 50.0% | |
| CTATTCCCACCTACAACCAC+CGG | + | chr8.4:3385033-3385052 | None:intergenic | 50.0% | |
| GAAACAGCAGGTGACATGGA+AGG | - | chr8.4:3385053-3385072 | MS.gene57980:intron | 50.0% | |
| GGAAGCTTCACGGAATGGTT+CGG | - | chr8.4:3387310-3387329 | MS.gene57980:intron | 50.0% | |
| GGAAGGGAGATGGATCTGAT+GGG | - | chr8.4:3385070-3385089 | MS.gene57980:intron | 50.0% | |
| GGAGCTCCAGTCATGTTTGT+GGG | - | chr8.4:3388744-3388763 | MS.gene57980:CDS | 50.0% | |
| GGCGAAATACATGGGTGAGA+TGG | + | chr8.4:3388556-3388575 | None:intergenic | 50.0% | |
| GGCGGTGGTTTGAAGAATGA+CGG | - | chr8.4:3385120-3385139 | MS.gene57980:CDS | 50.0% | |
| GGTCGGCATCAAATGTCGAT+AGG | + | chr8.4:3386719-3386738 | None:intergenic | 50.0% | |
| TCAGTGGCTGCAAGTCTTGA+AGG | - | chr8.4:3386630-3386649 | MS.gene57980:CDS | 50.0% | |
| TCCTTGTGACGGTATCGTCT+TGG | - | chr8.4:3386213-3386232 | MS.gene57980:intron | 50.0% | |
| TGGAAGGGAGATGGATCTGA+TGG | - | chr8.4:3385069-3385088 | MS.gene57980:intron | 50.0% | |
| TGGAGCTCCAGTCATGTTTG+TGG | - | chr8.4:3388743-3388762 | MS.gene57980:CDS | 50.0% | |
| TGGGTGTAGGAGATGTGGAA+AGG | + | chr8.4:3388301-3388320 | None:intergenic | 50.0% | |
| TGTGCTCAGTATTGCTGGGA+AGG | - | chr8.4:3386385-3386404 | MS.gene57980:CDS | 50.0% | |
| ! | AAGAAGAATGCCAGTGCTGG+TGG | - | chr8.4:3385093-3385112 | MS.gene57980:intron | 50.0% |
| ! | ATCTCGATACACGGTTCTGG+TGG | + | chr8.4:3384941-3384960 | None:intergenic | 50.0% |
| ! | ATTCCTCTCTGAAGGAGCCT+TGG | + | chr8.4:3387550-3387569 | None:intergenic | 50.0% |
| ! | GCTTCTTTTGCCACAACAGC+AGG | + | chr8.4:3387284-3387303 | None:intergenic | 50.0% |
| ! | GTTGAGGTCAGGGGCATATA+TGG | - | chr8.4:3386065-3386084 | MS.gene57980:intron | 50.0% |
| ! | TCTCGATACACGGTTCTGGT+GGG | + | chr8.4:3384940-3384959 | None:intergenic | 50.0% |
| ! | TGTCTTCTAGAGGAGCGATC+TGG | - | chr8.4:3384745-3384764 | MS.gene57980:intron | 50.0% |
| !! | AGGAAAGGTGTTGAGGTCAG+GGG | - | chr8.4:3386056-3386075 | MS.gene57980:intron | 50.0% |
| !! | CAGGAAAGGTGTTGAGGTCA+GGG | - | chr8.4:3386055-3386074 | MS.gene57980:intron | 50.0% |
| !! | TCAGGAAAGGTGTTGAGGTC+AGG | - | chr8.4:3386054-3386073 | MS.gene57980:intron | 50.0% |
| !! | TCTGTGTCACTTGTAGGCTG+AGG | - | chr8.4:3386584-3386603 | MS.gene57980:CDS | 50.0% |
| !!! | TACCTTTTTCGGCTCAGCCT+TGG | + | chr8.4:3385364-3385383 | None:intergenic | 50.0% |
| ACCCTCCAAGGTTTGCGATG+TGG | - | chr8.4:3387746-3387765 | MS.gene57980:intron | 55.0% | |
| AGGGAAGGGGGCGAAATACA+TGG | + | chr8.4:3388565-3388584 | None:intergenic | 55.0% | |
| CAGGAGCTGTTGAGCAGTTG+CGG | - | chr8.4:3387122-3387141 | MS.gene57980:intron | 55.0% | |
| CAGGTGACATGGAAGGGAGA+TGG | - | chr8.4:3385060-3385079 | MS.gene57980:intron | 55.0% | |
| CCCAAGACGATACCGTCACA+AGG | + | chr8.4:3386217-3386236 | None:intergenic | 55.0% | |
| CCCACATCCCAAACCTTGGA+GGG | + | chr8.4:3387788-3387807 | None:intergenic | 55.0% | |
| CCCACATCGCAAACCTTGGA+GGG | + | chr8.4:3387750-3387769 | None:intergenic | 55.0% | |
| CCCTCCAAGGTTTGCGATGT+GGG | - | chr8.4:3387747-3387766 | MS.gene57980:intron | 55.0% | |
| CCGCATCCCACAAACATGAC+TGG | + | chr8.4:3388753-3388772 | None:intergenic | 55.0% | |
| CGAATCCGGTGGTTGTAGGT+GGG | - | chr8.4:3385025-3385044 | MS.gene57980:intron | 55.0% | |
| CGGTGGTTGTAGGTGGGAAT+AGG | - | chr8.4:3385031-3385050 | MS.gene57980:intron | 55.0% | |
| GACTCATGCACGCAGACTTC+AGG | - | chr8.4:3387144-3387163 | MS.gene57980:intron | 55.0% | |
| GGGAAGAAGAATGCCAGTGC+TGG | - | chr8.4:3385090-3385109 | MS.gene57980:intron | 55.0% | |
| GGGAAGGGGGCGAAATACAT+GGG | + | chr8.4:3388564-3388583 | None:intergenic | 55.0% | |
| GGTGGGAGCTGCACTTTCAA+TGG | - | chr8.4:3388710-3388729 | MS.gene57980:CDS | 55.0% | |
| GTTGTGCTAGTCGACACAGC+TGG | - | chr8.4:3387335-3387354 | MS.gene57980:intron | 55.0% | |
| TCGAATCCGGTGGTTGTAGG+TGG | - | chr8.4:3385024-3385043 | MS.gene57980:intron | 55.0% | |
| TCTAGAGGAGCGATCTGGTG+CGG | - | chr8.4:3384750-3384769 | MS.gene57980:intron | 55.0% | |
| TGAAGCTGAGGCTCGTTCTG+AGG | - | chr8.4:3384990-3385009 | MS.gene57980:intron | 55.0% | |
| ! | ACCCTCCAAGGTTTGGGATG+TGG | - | chr8.4:3387784-3387803 | MS.gene57980:intron | 55.0% |
| ! | CCCTCCAAGGTTTGGGATGT+GGG | - | chr8.4:3387785-3387804 | MS.gene57980:intron | 55.0% |
| !! | AAGAATGCCAGTGCTGGTGG+TGG | - | chr8.4:3385096-3385115 | MS.gene57980:intron | 55.0% |
| CGACACAGCTGGTCGTATGC+AGG | - | chr8.4:3387346-3387365 | MS.gene57980:intron | 60.0% | |
| CTGGCCCACATCCCAAACCT+TGG | + | chr8.4:3387792-3387811 | None:intergenic | 60.0% | |
| CTGGCCCACATCGCAAACCT+TGG | + | chr8.4:3387754-3387773 | None:intergenic | 60.0% | |
| GAGCCAAGGCTCCTTCAGAG+AGG | - | chr8.4:3387544-3387563 | MS.gene57980:intron | 60.0% | |
| GCAACAGACCACCTGAGCCA+AGG | - | chr8.4:3387530-3387549 | MS.gene57980:intron | 60.0% | |
| GCCCACATCCCAAACCTTGG+AGG | + | chr8.4:3387789-3387808 | None:intergenic | 60.0% | |
| GCCCACATCGCAAACCTTGG+AGG | + | chr8.4:3387751-3387770 | None:intergenic | 60.0% | |
| GGCGGCAATGGAAGATGCAC+TGG | - | chr8.4:3386799-3386818 | MS.gene57980:CDS | 60.0% | |
| TGAAGGAGCCTTGGCTCAGG+TGG | + | chr8.4:3387541-3387560 | None:intergenic | 60.0% | |
| ! | CTCTGAAGGAGCCTTGGCTC+AGG | + | chr8.4:3387544-3387563 | None:intergenic | 60.0% |
| !! | AATGCCAGTGCTGGTGGTGG+TGG | - | chr8.4:3385099-3385118 | MS.gene57980:CDS | 60.0% |
| ACCGCCACCACCACCAGCAC+TGG | + | chr8.4:3385106-3385125 | None:intergenic | 70.0% | |
| !! | AGTGCTGGTGGTGGTGGCGG+TGG | - | chr8.4:3385105-3385124 | MS.gene57980:CDS | 70.0% |
| !! | GCCAGTGCTGGTGGTGGTGG+CGG | - | chr8.4:3385102-3385121 | MS.gene57980:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 3384632 | 3388836 | 3384632 | ID=MS.gene57980 |
| chr8.4 | mRNA | 3384632 | 3388836 | 3384632 | ID=MS.gene57980.t1;Parent=MS.gene57980 |
| chr8.4 | exon | 3387819 | 3388836 | 3387819 | ID=MS.gene57980.t1.exon1;Parent=MS.gene57980.t1 |
| chr8.4 | CDS | 3387819 | 3388836 | 3387819 | ID=cds.MS.gene57980.t1;Parent=MS.gene57980.t1 |
| chr8.4 | exon | 3386990 | 3387074 | 3386990 | ID=MS.gene57980.t1.exon2;Parent=MS.gene57980.t1 |
| chr8.4 | CDS | 3386990 | 3387074 | 3386990 | ID=cds.MS.gene57980.t1;Parent=MS.gene57980.t1 |
| chr8.4 | exon | 3386773 | 3386868 | 3386773 | ID=MS.gene57980.t1.exon3;Parent=MS.gene57980.t1 |
| chr8.4 | CDS | 3386773 | 3386868 | 3386773 | ID=cds.MS.gene57980.t1;Parent=MS.gene57980.t1 |
| chr8.4 | exon | 3386516 | 3386668 | 3386516 | ID=MS.gene57980.t1.exon4;Parent=MS.gene57980.t1 |
| chr8.4 | CDS | 3386516 | 3386668 | 3386516 | ID=cds.MS.gene57980.t1;Parent=MS.gene57980.t1 |
| chr8.4 | exon | 3386303 | 3386410 | 3386303 | ID=MS.gene57980.t1.exon5;Parent=MS.gene57980.t1 |
| chr8.4 | CDS | 3386303 | 3386410 | 3386303 | ID=cds.MS.gene57980.t1;Parent=MS.gene57980.t1 |
| chr8.4 | exon | 3386101 | 3386220 | 3386101 | ID=MS.gene57980.t1.exon6;Parent=MS.gene57980.t1 |
| chr8.4 | CDS | 3386101 | 3386220 | 3386101 | ID=cds.MS.gene57980.t1;Parent=MS.gene57980.t1 |
| chr8.4 | exon | 3385285 | 3385410 | 3385285 | ID=MS.gene57980.t1.exon7;Parent=MS.gene57980.t1 |
| chr8.4 | CDS | 3385285 | 3385410 | 3385285 | ID=cds.MS.gene57980.t1;Parent=MS.gene57980.t1 |
| chr8.4 | exon | 3385098 | 3385181 | 3385098 | ID=MS.gene57980.t1.exon8;Parent=MS.gene57980.t1 |
| chr8.4 | CDS | 3385098 | 3385181 | 3385098 | ID=cds.MS.gene57980.t1;Parent=MS.gene57980.t1 |
| chr8.4 | exon | 3384632 | 3384757 | 3384632 | ID=MS.gene57980.t1.exon9;Parent=MS.gene57980.t1 |
| chr8.4 | CDS | 3384632 | 3384757 | 3384632 | ID=cds.MS.gene57980.t1;Parent=MS.gene57980.t1 |
| Gene Sequence |
| Protein sequence |
