Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95204.t1 | XP_013459058.1 | 92.6 | 514 | 37 | 1 | 1 | 513 | 1 | 514 | 4.10E-264 | 920.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95204.t1 | Q9LDD4 | 39.3 | 191 | 95 | 6 | 145 | 330 | 370 | 544 | 1.5e-25 | 119.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95204.t1 | A0A072UUQ4 | 92.6 | 514 | 37 | 1 | 1 | 513 | 1 | 514 | 3.0e-264 | 920.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene95204 | 0.812287 | 4.57E-51 | -1.69E-46 |
| MS.gene04919 | MS.gene95204 | 0.815908 | 7.26E-52 | -1.69E-46 |
| MS.gene04920 | MS.gene95204 | 0.833181 | 6.18E-56 | -1.69E-46 |
| MS.gene049283 | MS.gene95204 | 0.863149 | 3.06E-64 | -1.69E-46 |
| MS.gene049419 | MS.gene95204 | -0.802858 | 4.59E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene95204 | 0.835421 | 1.69E-56 | -1.69E-46 |
| MS.gene049983 | MS.gene95204 | 0.842845 | 2.02E-58 | -1.69E-46 |
| MS.gene04998 | MS.gene95204 | 0.802234 | 6.18E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene95204 | 0.854532 | 1.16E-61 | -1.69E-46 |
| MS.gene050646 | MS.gene95204 | 0.834329 | 3.19E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene95204 | 0.847972 | 8.24E-60 | -1.69E-46 |
| MS.gene050945 | MS.gene95204 | 0.844072 | 9.48E-59 | -1.69E-46 |
| MS.gene051043 | MS.gene95204 | 0.834395 | 3.07E-56 | -1.69E-46 |
| MS.gene051343 | MS.gene95204 | 0.81511 | 1.09E-51 | -1.69E-46 |
| MS.gene051699 | MS.gene95204 | 0.817233 | 3.67E-52 | -1.69E-46 |
| MS.gene051832 | MS.gene95204 | 0.800376 | 1.48E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene95204 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene051902 | MS.gene95204 | 0.829852 | 4.08E-55 | -1.69E-46 |
| MS.gene051911 | MS.gene95204 | 0.801677 | 8.04E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene95204 | 0.83208 | 1.16E-55 | -1.69E-46 |
| MS.gene052052 | MS.gene95204 | 0.811046 | 8.51E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene95204 | 0.800525 | 1.38E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene95204 | 0.846389 | 2.24E-59 | -1.69E-46 |
| MS.gene052533 | MS.gene95204 | 0.810729 | 9.97E-51 | -1.69E-46 |
| MS.gene052932 | MS.gene95204 | 0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene95204 | 0.811855 | 5.68E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene95204 | 0.80752 | 4.86E-50 | -1.69E-46 |
| MS.gene053620 | MS.gene95204 | 0.817136 | 3.86E-52 | -1.69E-46 |
| MS.gene053726 | MS.gene95204 | 0.806267 | 8.94E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene95204 | 0.829768 | 4.28E-55 | -1.69E-46 |
| MS.gene054178 | MS.gene95204 | 0.811395 | 7.15E-51 | -1.69E-46 |
| MS.gene054222 | MS.gene95204 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene95204 | 0.842996 | 1.84E-58 | -1.69E-46 |
| MS.gene054709 | MS.gene95204 | 0.827092 | 1.89E-54 | -1.69E-46 |
| MS.gene054892 | MS.gene95204 | 0.838562 | 2.67E-57 | -1.69E-46 |
| MS.gene054893 | MS.gene95204 | 0.843796 | 1.12E-58 | -1.69E-46 |
| MS.gene054957 | MS.gene95204 | 0.813354 | 2.67E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene95204 | 0.807086 | 6.00E-50 | -1.69E-46 |
| MS.gene055841 | MS.gene95204 | 0.83136 | 1.74E-55 | -1.69E-46 |
| MS.gene055864 | MS.gene95204 | 0.814027 | 1.90E-51 | -1.69E-46 |
| MS.gene056045 | MS.gene95204 | 0.825308 | 5.03E-54 | -1.69E-46 |
| MS.gene056082 | MS.gene95204 | 0.810094 | 1.37E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene95204 | 0.807454 | 5.01E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene95204 | 0.852015 | 6.09E-61 | -1.69E-46 |
| MS.gene056779 | MS.gene95204 | 0.813298 | 2.75E-51 | -1.69E-46 |
| MS.gene056973 | MS.gene95204 | 0.829529 | 4.89E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene95204 | 0.833272 | 5.87E-56 | -1.69E-46 |
| MS.gene057155 | MS.gene95204 | 0.820626 | 6.21E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene95204 | 0.804998 | 1.65E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene95204 | 0.840934 | 6.45E-58 | -1.69E-46 |
| MS.gene058008 | MS.gene95204 | 0.804653 | 1.95E-49 | -1.69E-46 |
| MS.gene058074 | MS.gene95204 | 0.815535 | 8.80E-52 | -1.69E-46 |
| MS.gene058159 | MS.gene95204 | 0.829255 | 5.70E-55 | -1.69E-46 |
| MS.gene058429 | MS.gene95204 | 0.813058 | 3.10E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene95204 | 0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene95204 | 0.818298 | 2.11E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene95204 | -0.841132 | 5.72E-58 | -1.69E-46 |
| MS.gene059952 | MS.gene95204 | 0.80058 | 1.35E-48 | -1.69E-46 |
| MS.gene059965 | MS.gene95204 | 0.804977 | 1.67E-49 | -1.69E-46 |
| MS.gene060259 | MS.gene95204 | 0.849098 | 4.02E-60 | -1.69E-46 |
| MS.gene060435 | MS.gene95204 | 0.81906 | 1.42E-52 | -1.69E-46 |
| MS.gene060785 | MS.gene95204 | 0.805129 | 1.55E-49 | -1.69E-46 |
| MS.gene060850 | MS.gene95204 | 0.804561 | 2.04E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene95204 | 0.809812 | 1.57E-50 | -1.69E-46 |
| MS.gene060852 | MS.gene95204 | 0.808133 | 3.60E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene95204 | 0.819515 | 1.12E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene95204 | 0.835685 | 1.45E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene95204 | 0.828967 | 6.70E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene95204 | 0.847934 | 8.44E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene95204 | 0.82215 | 2.76E-53 | -1.69E-46 |
| MS.gene061160 | MS.gene95204 | 0.800759 | 1.24E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057919 | MS.gene95204 | PPI |
| MS.gene51814 | MS.gene95204 | PPI |
| MS.gene50873 | MS.gene95204 | PPI |
| MS.gene95204 | MS.gene057919 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95204.t1 | MTR_3g023780 | 95.525 | 514 | 22 | 1 | 1 | 513 | 1 | 514 | 0.0 | 988 |
| MS.gene95204.t1 | MTR_7g078120 | 39.267 | 191 | 99 | 5 | 140 | 326 | 378 | 555 | 1.86e-31 | 128 |
| MS.gene95204.t1 | MTR_7g078120 | 39.267 | 191 | 99 | 5 | 140 | 326 | 378 | 555 | 3.02e-31 | 128 |
| MS.gene95204.t1 | MTR_8g098645 | 39.011 | 182 | 98 | 4 | 147 | 326 | 141 | 311 | 1.11e-25 | 108 |
| MS.gene95204.t1 | MTR_8g098635 | 35.417 | 192 | 109 | 5 | 139 | 326 | 82 | 262 | 2.86e-25 | 106 |
| MS.gene95204.t1 | MTR_1g073380 | 37.056 | 197 | 111 | 5 | 132 | 326 | 378 | 563 | 8.41e-25 | 108 |
| MS.gene95204.t1 | MTR_8g098605 | 37.912 | 182 | 100 | 4 | 147 | 326 | 391 | 561 | 1.30e-24 | 107 |
| MS.gene95204.t1 | MTR_8g098635 | 35.417 | 192 | 109 | 5 | 139 | 326 | 165 | 345 | 1.83e-24 | 105 |
| MS.gene95204.t1 | MTR_1g073530 | 36.667 | 180 | 101 | 5 | 149 | 326 | 385 | 553 | 6.50e-24 | 105 |
| MS.gene95204.t1 | MTR_1g073590 | 36.667 | 180 | 101 | 5 | 149 | 326 | 382 | 550 | 7.30e-24 | 105 |
| MS.gene95204.t1 | MTR_8g028905 | 35.326 | 184 | 102 | 7 | 149 | 326 | 408 | 580 | 3.57e-22 | 100 |
| MS.gene95204.t1 | MTR_7g066890 | 32.778 | 180 | 114 | 5 | 143 | 321 | 188 | 361 | 5.08e-19 | 89.0 |
| MS.gene95204.t1 | MTR_7g066890 | 32.778 | 180 | 114 | 5 | 143 | 321 | 290 | 463 | 1.25e-18 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95204.t1 | AT1G13880 | 36.512 | 367 | 207 | 9 | 1 | 366 | 1 | 342 | 9.02e-63 | 211 |
| MS.gene95204.t1 | AT1G13880 | 36.512 | 367 | 207 | 9 | 1 | 366 | 11 | 352 | 1.25e-62 | 211 |
| MS.gene95204.t1 | AT1G13880 | 36.240 | 367 | 209 | 9 | 1 | 366 | 1 | 343 | 1.68e-62 | 210 |
| MS.gene95204.t1 | AT1G26580 | 44.223 | 251 | 128 | 5 | 114 | 352 | 33 | 283 | 4.41e-62 | 209 |
| MS.gene95204.t1 | AT1G26580 | 37.398 | 369 | 194 | 10 | 1 | 352 | 1 | 349 | 1.94e-61 | 209 |
| MS.gene95204.t1 | AT1G26580 | 37.398 | 369 | 194 | 10 | 1 | 352 | 1 | 349 | 1.94e-61 | 209 |
| MS.gene95204.t1 | AT2G03470 | 35.650 | 331 | 177 | 6 | 1 | 328 | 1 | 298 | 1.02e-59 | 204 |
| MS.gene95204.t1 | AT2G03470 | 48.718 | 195 | 96 | 1 | 134 | 328 | 107 | 297 | 1.03e-59 | 204 |
| MS.gene95204.t1 | AT4G11400 | 39.267 | 191 | 95 | 6 | 145 | 330 | 370 | 544 | 4.53e-28 | 118 |
| MS.gene95204.t1 | AT4G11400 | 39.267 | 191 | 95 | 6 | 145 | 330 | 370 | 544 | 4.53e-28 | 118 |
| MS.gene95204.t1 | AT5G04110 | 31.868 | 182 | 115 | 4 | 146 | 325 | 358 | 532 | 5.67e-23 | 102 |
| MS.gene95204.t1 | AT5G04110 | 31.868 | 182 | 115 | 4 | 146 | 325 | 358 | 532 | 5.67e-23 | 102 |
| MS.gene95204.t1 | AT5G04110 | 31.868 | 182 | 115 | 4 | 146 | 325 | 359 | 533 | 5.70e-23 | 102 |
| MS.gene95204.t1 | AT2G46040 | 35.165 | 182 | 99 | 6 | 151 | 326 | 362 | 530 | 1.81e-16 | 82.8 |
| MS.gene95204.t1 | AT2G46040 | 35.165 | 182 | 99 | 6 | 151 | 326 | 362 | 530 | 1.81e-16 | 82.8 |
| MS.gene95204.t1 | AT2G46040 | 35.165 | 182 | 99 | 6 | 151 | 326 | 376 | 544 | 2.15e-16 | 82.4 |
| MS.gene95204.t1 | AT5G04110 | 30.405 | 148 | 100 | 3 | 146 | 291 | 358 | 504 | 8.16e-15 | 77.4 |
Find 133 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTGGGACCTGCATGTTTC+GGG | 0.206799 | 3.2:+13465071 | None:intergenic |
| TAGGTATTCCTGCTTCTTCT+TGG | 0.231790 | 3.2:-13464758 | MS.gene95204:CDS |
| ACTGAAGTACTCATGGAAAA+AGG | 0.244769 | 3.2:+13464680 | None:intergenic |
| CATCCCTCAACAAGAATTTC+TGG | 0.247523 | 3.2:-13464182 | MS.gene95204:CDS |
| CTCATGAGTTAATGTCCTTA+TGG | 0.270357 | 3.2:+13464623 | None:intergenic |
| CTGAAATATATTGGCCGTTC+TGG | 0.274949 | 3.2:+13464657 | None:intergenic |
| TTCATTGAACTGGGGTTTGC+TGG | 0.286519 | 3.2:-13464282 | MS.gene95204:CDS |
| TATCACTATCAGCACTTAAT+AGG | 0.298492 | 3.2:+13464055 | None:intergenic |
| GATGAAAATTGTGATGTTAA+TGG | 0.303115 | 3.2:-13463877 | MS.gene95204:CDS |
| CATCCCAAACATGTTGGTCC+TGG | 0.308074 | 3.2:+13463758 | None:intergenic |
| CAGATTCAAACCTCAATGTT+TGG | 0.318946 | 3.2:-13464503 | MS.gene95204:CDS |
| ACAAGTATCATCTTCATAGA+TGG | 0.329130 | 3.2:+13463957 | None:intergenic |
| TCGCTGGGACCTGCATGTTT+CGG | 0.329434 | 3.2:+13465070 | None:intergenic |
| AAGCCCAGGACCAACATGTT+TGG | 0.344788 | 3.2:-13463762 | MS.gene95204:CDS |
| TGAACTGGGGTTTGCTGGCA+TGG | 0.358882 | 3.2:-13464277 | MS.gene95204:CDS |
| AGGTATTCCTGCTTCTTCTT+GGG | 0.363279 | 3.2:-13464757 | MS.gene95204:CDS |
| AGCCCAGGACCAACATGTTT+GGG | 0.368080 | 3.2:-13463761 | MS.gene95204:CDS |
| AGGAGAATGTTCAAGGAGTA+TGG | 0.375340 | 3.2:+13464590 | None:intergenic |
| CGTTCTGGACTGAAATATAT+TGG | 0.377694 | 3.2:+13464648 | None:intergenic |
| GCTGGGGACTCTCCTGTGAT+AGG | 0.378845 | 3.2:-13464777 | MS.gene95204:CDS |
| CCGCAATGATGATCACTTAG+AGG | 0.384163 | 3.2:-13463923 | MS.gene95204:CDS |
| AGATTCAAACCTCAATGTTT+GGG | 0.386204 | 3.2:-13464502 | MS.gene95204:CDS |
| GATTGAGAAATTCATTGAAC+TGG | 0.387524 | 3.2:-13464292 | MS.gene95204:CDS |
| CATTGGGGCAGTAACTATAA+TGG | 0.399780 | 3.2:-13463652 | MS.gene95204:CDS |
| GAGTGGGAATGGTGATCATT+GGG | 0.407252 | 3.2:-13463668 | MS.gene95204:CDS |
| AAATTCTTGTTGAGGGATGC+TGG | 0.410628 | 3.2:+13464186 | None:intergenic |
| CACCTGAAGTCTTAGCCAAA+TGG | 0.412401 | 3.2:+13464999 | None:intergenic |
| GAAAGCGAGCTGAGCAGAAC+AGG | 0.412737 | 3.2:-13464083 | MS.gene95204:CDS |
| ATCATCTTCGGCAGTGCAAC+TGG | 0.414815 | 3.2:+13464731 | None:intergenic |
| ATGTGTAAGACAACATATAA+TGG | 0.417704 | 3.2:-13464346 | MS.gene95204:CDS |
| TCATGAGTTAATGTCCTTAT+GGG | 0.424228 | 3.2:+13464624 | None:intergenic |
| TTCTGAACGGTGATCATCTT+CGG | 0.425750 | 3.2:+13464719 | None:intergenic |
| AATGTCCTTATGGGTCGTTC+TGG | 0.428131 | 3.2:+13464633 | None:intergenic |
| ATGGACATCCTAGAGGGGCT+GGG | 0.429258 | 3.2:-13464794 | MS.gene95204:CDS |
| ATCCCAAACATGTTGGTCCT+GGG | 0.430334 | 3.2:+13463759 | None:intergenic |
| GATGCACCAGGGTGGGATCC+TGG | 0.430640 | 3.2:-13463586 | MS.gene95204:CDS |
| ACCCATTTGGCTAAGACTTC+AGG | 0.442752 | 3.2:-13465001 | MS.gene95204:intron |
| TCTAGCCTTGATGATGAAGT+TGG | 0.445677 | 3.2:-13464414 | MS.gene95204:CDS |
| AGAGTGGGAATGGTGATCAT+TGG | 0.452381 | 3.2:-13463669 | MS.gene95204:CDS |
| TGATCAGCTCCAACTGATAC+AGG | 0.454985 | 3.2:+13464561 | None:intergenic |
| CCCTCATCTGATTCAAGCCC+AGG | 0.459996 | 3.2:-13463776 | MS.gene95204:CDS |
| GTTCCAGAAATTCTTGTTGA+GGG | 0.466806 | 3.2:+13464179 | None:intergenic |
| CTTGATGATGAAGTTGGAAA+AGG | 0.469243 | 3.2:-13464408 | MS.gene95204:CDS |
| AGGCTAGATAATTCCATCTC+AGG | 0.474272 | 3.2:+13464429 | None:intergenic |
| TGGACATCCTAGAGGGGCTG+GGG | 0.475484 | 3.2:-13464793 | MS.gene95204:CDS |
| ACCTGAAGTCTTAGCCAAAT+GGG | 0.476227 | 3.2:+13465000 | None:intergenic |
| CAGAATCCTCATCTTCCTCA+TGG | 0.482337 | 3.2:+13463992 | None:intergenic |
| ATCTTGCTCTAAAAGTAAGA+TGG | 0.482487 | 3.2:-13463557 | MS.gene95204:CDS |
| AGCATCTCCTCAGCATCAAA+AGG | 0.482810 | 3.2:+13465112 | None:intergenic |
| TGATGATTGTGACACCCATT+TGG | 0.485654 | 3.2:-13465014 | MS.gene95204:CDS |
| GATGGACATCCTAGAGGGGC+TGG | 0.487190 | 3.2:-13464795 | MS.gene95204:CDS |
| CTGGAGCATTGTGATGCACC+AGG | 0.488708 | 3.2:-13463598 | MS.gene95204:CDS |
| TGGGTGTCACAATCATCATC+AGG | 0.490674 | 3.2:+13465019 | None:intergenic |
| CATCCCCATCCCAAACATTG+AGG | 0.498295 | 3.2:+13464493 | None:intergenic |
| ATCACCATCAATGTTACTCT+TGG | 0.499498 | 3.2:+13463840 | None:intergenic |
| CAAACCTCAATGTTTGGGAT+GGG | 0.499908 | 3.2:-13464497 | MS.gene95204:CDS |
| TGTTAATGGAATAGTAGATC+AGG | 0.506535 | 3.2:-13463863 | MS.gene95204:CDS |
| TGTTAACGGTAGAAAATCGC+TGG | 0.507449 | 3.2:+13465054 | None:intergenic |
| TCAAGCTGATGTACCTGCAT+GGG | 0.510558 | 3.2:-13464538 | MS.gene95204:CDS |
| CAATGAATTTCTCAATCCCA+AGG | 0.514499 | 3.2:+13464298 | None:intergenic |
| GATAATTCCATCTCAGGCAT+AGG | 0.519691 | 3.2:+13464435 | None:intergenic |
| CAAGTATCATCTTCATAGAT+GGG | 0.519904 | 3.2:+13463958 | None:intergenic |
| TCAAACCTCAATGTTTGGGA+TGG | 0.524692 | 3.2:-13464498 | MS.gene95204:CDS |
| GAACTGGGGTTTGCTGGCAT+GGG | 0.525430 | 3.2:-13464276 | MS.gene95204:CDS |
| TTAGAGCAAGATACAAAGCC+AGG | 0.525570 | 3.2:+13463568 | None:intergenic |
| ACCATTCCCACTCTTCACCT+TGG | 0.525767 | 3.2:+13463678 | None:intergenic |
| GAGAGACCAAGGTGAAGAGT+GGG | 0.526119 | 3.2:-13463684 | MS.gene95204:CDS |
| TGATGCTGAGGAGATGCTTG+AGG | 0.526167 | 3.2:-13465107 | MS.gene95204:CDS |
| CCTCGCAAGCCTGTATCAGT+TGG | 0.530589 | 3.2:-13464570 | MS.gene95204:CDS |
| CCCATGTCATGTGATGTGTA+TGG | 0.535319 | 3.2:+13463718 | None:intergenic |
| CAGGCCAAGAGTAACATTGA+TGG | 0.535886 | 3.2:-13463844 | MS.gene95204:CDS |
| TATTATCCCTATGCCTGAGA+TGG | 0.538511 | 3.2:-13464442 | MS.gene95204:CDS |
| CTCAGGCATAGGGATAATAC+AGG | 0.539552 | 3.2:+13464446 | None:intergenic |
| ATAATTCCATCTCAGGCATA+GGG | 0.542120 | 3.2:+13464436 | None:intergenic |
| AAACCTCAATGTTTGGGATG+GGG | 0.542867 | 3.2:-13464496 | MS.gene95204:CDS |
| GGAGAGTCCCCAGCCCCTCT+AGG | 0.543130 | 3.2:+13464786 | None:intergenic |
| ACCAAGGTGAAGAGTGGGAA+TGG | 0.543330 | 3.2:-13463679 | MS.gene95204:CDS |
| GAGAACAAGTGGCTCAAAAG+TGG | 0.552554 | 3.2:-13464254 | MS.gene95204:CDS |
| GCTTGCGAGGAGAATGTTCA+AGG | 0.553211 | 3.2:+13464583 | None:intergenic |
| TCAGTCCAGAACGACCCATA+AGG | 0.556681 | 3.2:-13464638 | MS.gene95204:CDS |
| AGTTCCAGAAATTCTTGTTG+AGG | 0.557435 | 3.2:+13464178 | None:intergenic |
| ATTGAGAAATTCATTGAACT+GGG | 0.557616 | 3.2:-13464291 | MS.gene95204:CDS |
| CTTGATATGCATCACTCTCG+TGG | 0.558540 | 3.2:-13463802 | MS.gene95204:CDS |
| GTTCTGGACTGAAGTACTCA+TGG | 0.558958 | 3.2:+13464673 | None:intergenic |
| AGAGAGACCAAGGTGAAGAG+TGG | 0.559975 | 3.2:-13463685 | MS.gene95204:CDS |
| TTCAAACACCCGAAACATGC+AGG | 0.560228 | 3.2:-13465079 | MS.gene95204:CDS |
| GTAAGCAATGGTTACAGCCA+AGG | 0.561471 | 3.2:-13463628 | MS.gene95204:CDS |
| GTTCAAGGAGTATGGAATAG+AGG | 0.561760 | 3.2:+13464598 | None:intergenic |
| TGCTGGCATGGGAGAACAAG+TGG | 0.566560 | 3.2:-13464265 | MS.gene95204:CDS |
| CACTATCAGCACTTAATAGG+TGG | 0.573148 | 3.2:+13464058 | None:intergenic |
| ATCAAGCTGATGTACCTGCA+TGG | 0.574206 | 3.2:-13464539 | MS.gene95204:CDS |
| AACTATAATGGAGTAAGCAA+TGG | 0.575552 | 3.2:-13463640 | MS.gene95204:CDS |
| TTACAGCCAAGGGTATGTGC+TGG | 0.575897 | 3.2:-13463617 | MS.gene95204:CDS |
| TCCATACACATCACATGACA+TGG | 0.582605 | 3.2:-13463719 | MS.gene95204:CDS |
| TCTTCTATCATGCTACATGT+AGG | 0.582653 | 3.2:+13463526 | None:intergenic |
| AATGCTCCAGCACATACCCT+TGG | 0.585409 | 3.2:+13463611 | None:intergenic |
| TGCTACCCATGAGGAAGATG+AGG | 0.586723 | 3.2:-13463998 | MS.gene95204:CDS |
| GAAGCAGGAATACCTATCAC+AGG | 0.590260 | 3.2:+13464765 | None:intergenic |
| CTTGCGATGGACATCCTAGA+GGG | 0.595100 | 3.2:-13464800 | MS.gene95204:CDS |
| AGAATCCTCATCTTCCTCAT+GGG | 0.600761 | 3.2:+13463993 | None:intergenic |
| CTGATAGTGATAATGATGAA+TGG | 0.603537 | 3.2:-13464044 | MS.gene95204:CDS |
| AATGAATTTCTCAATCCCAA+GGG | 0.604533 | 3.2:+13464299 | None:intergenic |
| TCCTGGGCTTGAATCAGATG+AGG | 0.606024 | 3.2:+13463775 | None:intergenic |
| CCTGGGCTTGAATCAGATGA+GGG | 0.606854 | 3.2:+13463776 | None:intergenic |
| CTTGCTGTTGAAACTTGCGA+TGG | 0.613437 | 3.2:-13464813 | MS.gene95204:CDS |
| TAAGCAATGGTTACAGCCAA+GGG | 0.614655 | 3.2:-13463627 | MS.gene95204:CDS |
| GATGTATAGGCTGTTCTGAA+CGG | 0.621550 | 3.2:+13464706 | None:intergenic |
| GATTGTAGCTGCGAGGACAG+TGG | 0.623911 | 3.2:-13464378 | MS.gene95204:CDS |
| ATCTTCGGCAGTGCAACTGG+TGG | 0.626520 | 3.2:+13464734 | None:intergenic |
| CTGGTGGCCCAAGAAGAAGC+AGG | 0.631250 | 3.2:+13464750 | None:intergenic |
| CCAACTGATACAGGCTTGCG+AGG | 0.632606 | 3.2:+13464570 | None:intergenic |
| CATAAGGACATTAACTCATG+AGG | 0.642135 | 3.2:-13464622 | MS.gene95204:CDS |
| GCATTGTGATGCACCAGGGT+GGG | 0.646215 | 3.2:-13463593 | MS.gene95204:CDS |
| GTTAACGGTAGAAAATCGCT+GGG | 0.649982 | 3.2:+13465055 | None:intergenic |
| ACAAAGCCAGGATCCCACCC+TGG | 0.650732 | 3.2:+13463580 | None:intergenic |
| AGTTGCTTCAAGAGAGACCA+AGG | 0.656150 | 3.2:-13463695 | MS.gene95204:CDS |
| TTGAGAAATTCATTGAACTG+GGG | 0.658353 | 3.2:-13464290 | MS.gene95204:CDS |
| CAAGCTGATGTACCTGCATG+GGG | 0.658662 | 3.2:-13464537 | MS.gene95204:CDS |
| ATGAGTACTTCAGTCCAGAA+CGG | 0.667987 | 3.2:-13464671 | MS.gene95204:CDS |
| CCTCTAAGTGATCATCATTG+CGG | 0.670801 | 3.2:+13463923 | None:intergenic |
| TGGAGCATTGTGATGCACCA+GGG | 0.681363 | 3.2:-13463597 | MS.gene95204:CDS |
| CTGGGCTTGAATCAGATGAG+GGG | 0.684489 | 3.2:+13463777 | None:intergenic |
| AGTGGGAATGGTGATCATTG+GGG | 0.687140 | 3.2:-13463667 | MS.gene95204:CDS |
| ACTTGCGATGGACATCCTAG+AGG | 0.688959 | 3.2:-13464801 | MS.gene95204:CDS |
| CCATACACATCACATGACAT+GGG | 0.689211 | 3.2:-13463718 | MS.gene95204:CDS |
| AGATGAACATCTATTTCACA+AGG | 0.692555 | 3.2:-13464223 | MS.gene95204:CDS |
| CAATGAAGTTGCTACCCATG+AGG | 0.694283 | 3.2:-13464007 | MS.gene95204:CDS |
| AGCATTGTGATGCACCAGGG+TGG | 0.699405 | 3.2:-13463594 | MS.gene95204:CDS |
| TTGCGATGGACATCCTAGAG+GGG | 0.710808 | 3.2:-13464799 | MS.gene95204:CDS |
| AGTGATAATGATGAATGGCA+AGG | 0.715180 | 3.2:-13464039 | MS.gene95204:CDS |
| ATAGAGGAAGGATATGCACA+AGG | 0.716188 | 3.2:-13464858 | MS.gene95204:intron |
| AAGAACTGATTGTAGCTGCG+AGG | 0.720002 | 3.2:-13464385 | MS.gene95204:CDS |
| GAGGAAGGATATGCACAAGG+TGG | 0.730040 | 3.2:-13464855 | MS.gene95204:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACTATTAAAAACCCT+TGG | - | chr3.2:13464295-13464314 | MS.gene95204:CDS | 20.0% |
| !! | AAAAACTATTAAAAACCCTT+GGG | - | chr3.2:13464296-13464315 | MS.gene95204:CDS | 20.0% |
| !! | ACTATGTAATATACATTTCA+AGG | - | chr3.2:13463672-13463691 | MS.gene95204:CDS | 20.0% |
| ! | ATGTGTAAGACAACATATAA+TGG | - | chr3.2:13464264-13464283 | MS.gene95204:CDS | 25.0% |
| ! | ATTGAGAAATTCATTGAACT+GGG | - | chr3.2:13464319-13464338 | MS.gene95204:CDS | 25.0% |
| ! | GATGAAAATTGTGATGTTAA+TGG | - | chr3.2:13464733-13464752 | MS.gene95204:CDS | 25.0% |
| !!! | GATTTTAATCTTGTGCAATT+TGG | - | chr3.2:13463642-13463661 | MS.gene95204:CDS | 25.0% |
| AAGCTGAAAAAAGAATGATG+GGG | - | chr3.2:13464140-13464159 | MS.gene95204:CDS | 30.0% | |
| AATGAATTTCTCAATCCCAA+GGG | + | chr3.2:13464314-13464333 | None:intergenic | 30.0% | |
| ACAAGTATCATCTTCATAGA+TGG | + | chr3.2:13464656-13464675 | None:intergenic | 30.0% | |
| ACATTGTAATTCATAGAGGA+AGG | - | chr3.2:13463740-13463759 | MS.gene95204:CDS | 30.0% | |
| AGATGAACATCTATTTCACA+AGG | - | chr3.2:13464387-13464406 | MS.gene95204:CDS | 30.0% | |
| AGATTCAAACCTCAATGTTT+GGG | - | chr3.2:13464108-13464127 | MS.gene95204:CDS | 30.0% | |
| CAAGTATCATCTTCATAGAT+GGG | + | chr3.2:13464655-13464674 | None:intergenic | 30.0% | |
| GAAGCTGAAAAAAGAATGAT+GGG | - | chr3.2:13464139-13464158 | MS.gene95204:CDS | 30.0% | |
| GATTGAGAAATTCATTGAAC+TGG | - | chr3.2:13464318-13464337 | MS.gene95204:CDS | 30.0% | |
| GGAAAAACAGATTCTGTTAA+CGG | + | chr3.2:13463573-13463592 | None:intergenic | 30.0% | |
| GTCTACATTGTAATTCATAG+AGG | - | chr3.2:13463736-13463755 | MS.gene95204:CDS | 30.0% | |
| TATCACTATCAGCACTTAAT+AGG | + | chr3.2:13464558-13464577 | None:intergenic | 30.0% | |
| TCATGAGTTAATGTCCTTAT+GGG | + | chr3.2:13463989-13464008 | None:intergenic | 30.0% | |
| TGAAGCTGAAAAAAGAATGA+TGG | - | chr3.2:13464138-13464157 | MS.gene95204:CDS | 30.0% | |
| TGTTAATGGAATAGTAGATC+AGG | - | chr3.2:13464747-13464766 | MS.gene95204:CDS | 30.0% | |
| TTGAGAAATTCATTGAACTG+GGG | - | chr3.2:13464320-13464339 | MS.gene95204:CDS | 30.0% | |
| ! | AACTATAATGGAGTAAGCAA+TGG | - | chr3.2:13464970-13464989 | MS.gene95204:intron | 30.0% |
| ! | AGCATGATAGAAGAAGTTTT+TGG | - | chr3.2:13465093-13465112 | MS.gene95204:CDS | 30.0% |
| ! | CTGATAGTGATAATGATGAA+TGG | - | chr3.2:13464566-13464585 | MS.gene95204:CDS | 30.0% |
| !! | ATAGAAGAAGTTTTTGGAGA+TGG | - | chr3.2:13465099-13465118 | MS.gene95204:CDS | 30.0% |
| !! | ATCTTGCTCTAAAAGTAAGA+TGG | - | chr3.2:13465053-13465072 | MS.gene95204:CDS | 30.0% |
| AGTTCCAGAAATTCTTGTTG+AGG | + | chr3.2:13464435-13464454 | None:intergenic | 35.0% | |
| ATAATTCCATCTCAGGCATA+GGG | + | chr3.2:13464177-13464196 | None:intergenic | 35.0% | |
| ATCACCATCAATGTTACTCT+TGG | + | chr3.2:13464773-13464792 | None:intergenic | 35.0% | |
| CAATGAATTTCTCAATCCCA+AGG | + | chr3.2:13464315-13464334 | None:intergenic | 35.0% | |
| CAGATTCAAACCTCAATGTT+TGG | - | chr3.2:13464107-13464126 | MS.gene95204:CDS | 35.0% | |
| CATAAGGACATTAACTCATG+AGG | - | chr3.2:13463988-13464007 | MS.gene95204:CDS | 35.0% | |
| CTCATGAGTTAATGTCCTTA+TGG | + | chr3.2:13463990-13464009 | None:intergenic | 35.0% | |
| GTTCCAGAAATTCTTGTTGA+GGG | + | chr3.2:13464434-13464453 | None:intergenic | 35.0% | |
| TCTTCTATCATGCTACATGT+AGG | + | chr3.2:13465087-13465106 | None:intergenic | 35.0% | |
| TGGAAAAAGGGAAGATGTAT+AGG | + | chr3.2:13463920-13463939 | None:intergenic | 35.0% | |
| ! | ACTGAAGTACTCATGGAAAA+AGG | + | chr3.2:13463933-13463952 | None:intergenic | 35.0% |
| ! | AGTGATAATGATGAATGGCA+AGG | - | chr3.2:13464571-13464590 | MS.gene95204:CDS | 35.0% |
| ! | CGTTCTGGACTGAAATATAT+TGG | + | chr3.2:13463965-13463984 | None:intergenic | 35.0% |
| ! | CTGAAGTACTCATGGAAAAA+GGG | + | chr3.2:13463932-13463951 | None:intergenic | 35.0% |
| ! | CTTTTCCAACTTCATCATCA+AGG | + | chr3.2:13464204-13464223 | None:intergenic | 35.0% |
| !! | CTTGATGATGAAGTTGGAAA+AGG | - | chr3.2:13464202-13464221 | MS.gene95204:CDS | 35.0% |
| !! | CTTTTTCATCCCAAACATGT+TGG | + | chr3.2:13464861-13464880 | None:intergenic | 35.0% |
| AAATTCTTGTTGAGGGATGC+TGG | + | chr3.2:13464427-13464446 | None:intergenic | 40.0% | |
| ACCTGAAGTCTTAGCCAAAT+GGG | + | chr3.2:13463613-13463632 | None:intergenic | 40.0% | |
| AGAATCCTCATCTTCCTCAT+GGG | + | chr3.2:13464620-13464639 | None:intergenic | 40.0% | |
| AGGAGAATGTTCAAGGAGTA+TGG | + | chr3.2:13464023-13464042 | None:intergenic | 40.0% | |
| AGGCTAGATAATTCCATCTC+AGG | + | chr3.2:13464184-13464203 | None:intergenic | 40.0% | |
| AGGTATTCCTGCTTCTTCTT+GGG | - | chr3.2:13463853-13463872 | MS.gene95204:CDS | 40.0% | |
| ATAGAGGAAGGATATGCACA+AGG | - | chr3.2:13463752-13463771 | MS.gene95204:CDS | 40.0% | |
| ATGAGTACTTCAGTCCAGAA+CGG | - | chr3.2:13463939-13463958 | MS.gene95204:CDS | 40.0% | |
| ATTTGGCTAAGACTTCAGGT+GGG | - | chr3.2:13463613-13463632 | MS.gene95204:CDS | 40.0% | |
| CACTATCAGCACTTAATAGG+TGG | + | chr3.2:13464555-13464574 | None:intergenic | 40.0% | |
| CATCCCTCAACAAGAATTTC+TGG | - | chr3.2:13464428-13464447 | MS.gene95204:CDS | 40.0% | |
| CATTGGGGCAGTAACTATAA+TGG | - | chr3.2:13464958-13464977 | MS.gene95204:intron | 40.0% | |
| CCATACACATCACATGACAT+GGG | - | chr3.2:13464892-13464911 | MS.gene95204:intron | 40.0% | |
| CCTCTAAGTGATCATCATTG+CGG | + | chr3.2:13464690-13464709 | None:intergenic | 40.0% | |
| CTGAAATATATTGGCCGTTC+TGG | + | chr3.2:13463956-13463975 | None:intergenic | 40.0% | |
| GATAATTCCATCTCAGGCAT+AGG | + | chr3.2:13464178-13464197 | None:intergenic | 40.0% | |
| GTTAACGGTAGAAAATCGCT+GGG | + | chr3.2:13463558-13463577 | None:intergenic | 40.0% | |
| TAAGCAATGGTTACAGCCAA+GGG | - | chr3.2:13464983-13465002 | MS.gene95204:intron | 40.0% | |
| TAGGTATTCCTGCTTCTTCT+TGG | - | chr3.2:13463852-13463871 | MS.gene95204:CDS | 40.0% | |
| TATTATCCCTATGCCTGAGA+TGG | - | chr3.2:13464168-13464187 | MS.gene95204:CDS | 40.0% | |
| TCAAACCTCAATGTTTGGGA+TGG | - | chr3.2:13464112-13464131 | MS.gene95204:CDS | 40.0% | |
| TCCATACACATCACATGACA+TGG | - | chr3.2:13464891-13464910 | MS.gene95204:intron | 40.0% | |
| TGATGATTGTGACACCCATT+TGG | - | chr3.2:13463596-13463615 | MS.gene95204:CDS | 40.0% | |
| TGTTAACGGTAGAAAATCGC+TGG | + | chr3.2:13463559-13463578 | None:intergenic | 40.0% | |
| TTAGAGCAAGATACAAAGCC+AGG | + | chr3.2:13465045-13465064 | None:intergenic | 40.0% | |
| TTCTGAACGGTGATCATCTT+CGG | + | chr3.2:13463894-13463913 | None:intergenic | 40.0% | |
| ! | AAACCTCAATGTTTGGGATG+GGG | - | chr3.2:13464114-13464133 | MS.gene95204:CDS | 40.0% |
| ! | ATCTCCTTTTTGCTTCGTGA+GGG | + | chr3.2:13464475-13464494 | None:intergenic | 40.0% |
| ! | CAAACCTCAATGTTTGGGAT+GGG | - | chr3.2:13464113-13464132 | MS.gene95204:CDS | 40.0% |
| ! | GATGTATAGGCTGTTCTGAA+CGG | + | chr3.2:13463907-13463926 | None:intergenic | 40.0% |
| ! | GTTCAAGGAGTATGGAATAG+AGG | + | chr3.2:13464015-13464034 | None:intergenic | 40.0% |
| ! | TATCTCCTTTTTGCTTCGTG+AGG | + | chr3.2:13464476-13464495 | None:intergenic | 40.0% |
| ! | TTTTCCCTCACGAAGCAAAA+AGG | - | chr3.2:13464468-13464487 | MS.gene95204:CDS | 40.0% |
| !! | AAGTTTTTGGAGATGGACGA+AGG | - | chr3.2:13465106-13465125 | MS.gene95204:CDS | 40.0% |
| !! | TCTAGCCTTGATGATGAAGT+TGG | - | chr3.2:13464196-13464215 | MS.gene95204:CDS | 40.0% |
| AAGAACTGATTGTAGCTGCG+AGG | - | chr3.2:13464225-13464244 | MS.gene95204:CDS | 45.0% | |
| AATGTCCTTATGGGTCGTTC+TGG | + | chr3.2:13463980-13463999 | None:intergenic | 45.0% | |
| ACCCATTTGGCTAAGACTTC+AGG | - | chr3.2:13463609-13463628 | MS.gene95204:CDS | 45.0% | |
| AGAGTGGGAATGGTGATCAT+TGG | - | chr3.2:13464941-13464960 | MS.gene95204:intron | 45.0% | |
| AGCATCTCCTCAGCATCAAA+AGG | + | chr3.2:13463501-13463520 | None:intergenic | 45.0% | |
| AGTGGGAATGGTGATCATTG+GGG | - | chr3.2:13464943-13464962 | MS.gene95204:intron | 45.0% | |
| AGTTGCTTCAAGAGAGACCA+AGG | - | chr3.2:13464915-13464934 | MS.gene95204:intron | 45.0% | |
| ATCAAGCTGATGTACCTGCA+TGG | - | chr3.2:13464071-13464090 | MS.gene95204:CDS | 45.0% | |
| ATCCCAAACATGTTGGTCCT+GGG | + | chr3.2:13464854-13464873 | None:intergenic | 45.0% | |
| CAATGAAGTTGCTACCCATG+AGG | - | chr3.2:13464603-13464622 | MS.gene95204:CDS | 45.0% | |
| CACCTGAAGTCTTAGCCAAA+TGG | + | chr3.2:13463614-13463633 | None:intergenic | 45.0% | |
| CAGAATCCTCATCTTCCTCA+TGG | + | chr3.2:13464621-13464640 | None:intergenic | 45.0% | |
| CAGGCCAAGAGTAACATTGA+TGG | - | chr3.2:13464766-13464785 | MS.gene95204:CDS | 45.0% | |
| CATTTGGCTAAGACTTCAGG+TGG | - | chr3.2:13463612-13463631 | MS.gene95204:CDS | 45.0% | |
| CCCATGTCATGTGATGTGTA+TGG | + | chr3.2:13464895-13464914 | None:intergenic | 45.0% | |
| CCGCAATGATGATCACTTAG+AGG | - | chr3.2:13464687-13464706 | MS.gene95204:CDS | 45.0% | |
| CTCAGGCATAGGGATAATAC+AGG | + | chr3.2:13464167-13464186 | None:intergenic | 45.0% | |
| CTTGATATGCATCACTCTCG+TGG | - | chr3.2:13464808-13464827 | MS.gene95204:CDS | 45.0% | |
| GAAGCAGGAATACCTATCAC+AGG | + | chr3.2:13463848-13463867 | None:intergenic | 45.0% | |
| GAGAACAAGTGGCTCAAAAG+TGG | - | chr3.2:13464356-13464375 | MS.gene95204:CDS | 45.0% | |
| GAGTGGGAATGGTGATCATT+GGG | - | chr3.2:13464942-13464961 | MS.gene95204:intron | 45.0% | |
| GCTTCGTGAGGGAAAAACAA+TGG | + | chr3.2:13464464-13464483 | None:intergenic | 45.0% | |
| GTAAGCAATGGTTACAGCCA+AGG | - | chr3.2:13464982-13465001 | MS.gene95204:intron | 45.0% | |
| TCAAGCTGATGTACCTGCAT+GGG | - | chr3.2:13464072-13464091 | MS.gene95204:CDS | 45.0% | |
| TGATCAGCTCCAACTGATAC+AGG | + | chr3.2:13464052-13464071 | None:intergenic | 45.0% | |
| TTCAAACACCCGAAACATGC+AGG | - | chr3.2:13463531-13463550 | MS.gene95204:CDS | 45.0% | |
| TTCATTGAACTGGGGTTTGC+TGG | - | chr3.2:13464328-13464347 | MS.gene95204:CDS | 45.0% | |
| ! | GAAACGTCCTTTTGATGCTG+AGG | - | chr3.2:13463491-13463510 | MS.gene95204:CDS | 45.0% |
| ! | GTTCTGGACTGAAGTACTCA+TGG | + | chr3.2:13463940-13463959 | None:intergenic | 45.0% |
| ! | TACCTGCATGGGGTTTTTCT+AGG | - | chr3.2:13464083-13464102 | MS.gene95204:CDS | 45.0% |
| ! | TGGGTGTCACAATCATCATC+AGG | + | chr3.2:13463594-13463613 | None:intergenic | 45.0% |
| !! | CTTGCTGTTGAAACTTGCGA+TGG | - | chr3.2:13463797-13463816 | MS.gene95204:CDS | 45.0% |
| AAGCCCAGGACCAACATGTT+TGG | - | chr3.2:13464848-13464867 | MS.gene95204:CDS | 50.0% | |
| AATGCTCCAGCACATACCCT+TGG | + | chr3.2:13465002-13465021 | None:intergenic | 50.0% | |
| ACCAAGGTGAAGAGTGGGAA+TGG | - | chr3.2:13464931-13464950 | MS.gene95204:intron | 50.0% | |
| ACCATTCCCACTCTTCACCT+TGG | + | chr3.2:13464935-13464954 | None:intergenic | 50.0% | |
| ACTTGCGATGGACATCCTAG+AGG | - | chr3.2:13463809-13463828 | MS.gene95204:CDS | 50.0% | |
| AGAGAGACCAAGGTGAAGAG+TGG | - | chr3.2:13464925-13464944 | MS.gene95204:intron | 50.0% | |
| AGCCCAGGACCAACATGTTT+GGG | - | chr3.2:13464849-13464868 | MS.gene95204:CDS | 50.0% | |
| ATCATCTTCGGCAGTGCAAC+TGG | + | chr3.2:13463882-13463901 | None:intergenic | 50.0% | |
| CAAGCTGATGTACCTGCATG+GGG | - | chr3.2:13464073-13464092 | MS.gene95204:CDS | 50.0% | |
| CATCCCAAACATGTTGGTCC+TGG | + | chr3.2:13464855-13464874 | None:intergenic | 50.0% | |
| CATCCCCATCCCAAACATTG+AGG | + | chr3.2:13464120-13464139 | None:intergenic | 50.0% | |
| CCTGGGCTTGAATCAGATGA+GGG | + | chr3.2:13464837-13464856 | None:intergenic | 50.0% | |
| CTGGGCTTGAATCAGATGAG+GGG | + | chr3.2:13464836-13464855 | None:intergenic | 50.0% | |
| CTTGCGATGGACATCCTAGA+GGG | - | chr3.2:13463810-13463829 | MS.gene95204:CDS | 50.0% | |
| GACCTAGAAAAACCCCATGC+AGG | + | chr3.2:13464088-13464107 | None:intergenic | 50.0% | |
| GAGAGACCAAGGTGAAGAGT+GGG | - | chr3.2:13464926-13464945 | MS.gene95204:intron | 50.0% | |
| GAGGAAGGATATGCACAAGG+TGG | - | chr3.2:13463755-13463774 | MS.gene95204:CDS | 50.0% | |
| GCTTGCGAGGAGAATGTTCA+AGG | + | chr3.2:13464030-13464049 | None:intergenic | 50.0% | |
| TCAGTCCAGAACGACCCATA+AGG | - | chr3.2:13463972-13463991 | MS.gene95204:CDS | 50.0% | |
| TCCTGGGCTTGAATCAGATG+AGG | + | chr3.2:13464838-13464857 | None:intergenic | 50.0% | |
| TGATGCTGAGGAGATGCTTG+AGG | - | chr3.2:13463503-13463522 | MS.gene95204:CDS | 50.0% | |
| TGCTACCCATGAGGAAGATG+AGG | - | chr3.2:13464612-13464631 | MS.gene95204:CDS | 50.0% | |
| TTGCGATGGACATCCTAGAG+GGG | - | chr3.2:13463811-13463830 | MS.gene95204:CDS | 50.0% | |
| ! | TTACAGCCAAGGGTATGTGC+TGG | - | chr3.2:13464993-13465012 | MS.gene95204:intron | 50.0% |
| !! | TGGAGCATTGTGATGCACCA+GGG | - | chr3.2:13465013-13465032 | MS.gene95204:CDS | 50.0% |
| AGCATTGTGATGCACCAGGG+TGG | - | chr3.2:13465016-13465035 | MS.gene95204:CDS | 55.0% | |
| ATCTTCGGCAGTGCAACTGG+TGG | + | chr3.2:13463879-13463898 | None:intergenic | 55.0% | |
| ATGGACATCCTAGAGGGGCT+GGG | - | chr3.2:13463816-13463835 | MS.gene95204:CDS | 55.0% | |
| CCAACTGATACAGGCTTGCG+AGG | + | chr3.2:13464043-13464062 | None:intergenic | 55.0% | |
| CCCTCATCTGATTCAAGCCC+AGG | - | chr3.2:13464834-13464853 | MS.gene95204:CDS | 55.0% | |
| CCTCGCAAGCCTGTATCAGT+TGG | - | chr3.2:13464040-13464059 | MS.gene95204:CDS | 55.0% | |
| GAAAGCGAGCTGAGCAGAAC+AGG | - | chr3.2:13464527-13464546 | MS.gene95204:CDS | 55.0% | |
| GATTGTAGCTGCGAGGACAG+TGG | - | chr3.2:13464232-13464251 | MS.gene95204:CDS | 55.0% | |
| GCATTGTGATGCACCAGGGT+GGG | - | chr3.2:13465017-13465036 | MS.gene95204:CDS | 55.0% | |
| TCGCTGGGACCTGCATGTTT+CGG | + | chr3.2:13463543-13463562 | None:intergenic | 55.0% | |
| TGCTGGCATGGGAGAACAAG+TGG | - | chr3.2:13464345-13464364 | MS.gene95204:CDS | 55.0% | |
| !! | CTGGAGCATTGTGATGCACC+AGG | - | chr3.2:13465012-13465031 | MS.gene95204:CDS | 55.0% |
| !! | GAACTGGGGTTTGCTGGCAT+GGG | - | chr3.2:13464334-13464353 | MS.gene95204:CDS | 55.0% |
| !! | TGAACTGGGGTTTGCTGGCA+TGG | - | chr3.2:13464333-13464352 | MS.gene95204:CDS | 55.0% |
| ACAAAGCCAGGATCCCACCC+TGG | + | chr3.2:13465033-13465052 | None:intergenic | 60.0% | |
| CGCTGGGACCTGCATGTTTC+GGG | + | chr3.2:13463542-13463561 | None:intergenic | 60.0% | |
| CTGGTGGCCCAAGAAGAAGC+AGG | + | chr3.2:13463863-13463882 | None:intergenic | 60.0% | |
| GATGGACATCCTAGAGGGGC+TGG | - | chr3.2:13463815-13463834 | MS.gene95204:CDS | 60.0% | |
| GCTGGGGACTCTCCTGTGAT+AGG | - | chr3.2:13463833-13463852 | MS.gene95204:CDS | 60.0% | |
| TGGACATCCTAGAGGGGCTG+GGG | - | chr3.2:13463817-13463836 | MS.gene95204:CDS | 60.0% | |
| GATGCACCAGGGTGGGATCC+TGG | - | chr3.2:13465024-13465043 | MS.gene95204:CDS | 65.0% | |
| GGAGAGTCCCCAGCCCCTCT+AGG | + | chr3.2:13463827-13463846 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 13463483 | 13465149 | 13463483 | ID=MS.gene95204 |
| chr3.2 | mRNA | 13463483 | 13465149 | 13463483 | ID=MS.gene95204.t1;Parent=MS.gene95204 |
| chr3.2 | exon | 13465002 | 13465149 | 13465002 | ID=MS.gene95204.t1.exon1;Parent=MS.gene95204.t1 |
| chr3.2 | CDS | 13465002 | 13465149 | 13465002 | ID=cds.MS.gene95204.t1;Parent=MS.gene95204.t1 |
| chr3.2 | exon | 13463483 | 13464876 | 13463483 | ID=MS.gene95204.t1.exon2;Parent=MS.gene95204.t1 |
| chr3.2 | CDS | 13463483 | 13464876 | 13463483 | ID=cds.MS.gene95204.t1;Parent=MS.gene95204.t1 |
| Gene Sequence |
| Protein sequence |
