Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052496.t1 | XP_024638507.1 | 58.2 | 273 | 36 | 3 | 1 | 197 | 76 | 346 | 1.40E-30 | 145.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052496.t1 | G7ZZ81 | 58.2 | 273 | 36 | 3 | 1 | 197 | 75 | 345 | 1.0e-30 | 145.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052496 | MS.gene052497 | 0.880247 | 6.43E-70 | -1.69E-46 |
| MS.gene052496 | MS.gene057929 | 0.800349 | 1.50E-48 | -1.69E-46 |
| MS.gene052496 | MS.gene059713 | 0.808087 | 3.68E-50 | -1.69E-46 |
| MS.gene052496 | MS.gene062354 | 0.802992 | 4.31E-49 | -1.69E-46 |
| MS.gene052496 | MS.gene066896 | 0.800234 | 1.59E-48 | -1.69E-46 |
| MS.gene052496 | MS.gene067450 | 0.824996 | 5.96E-54 | -1.69E-46 |
| MS.gene052496 | MS.gene26306 | 0.808034 | 3.78E-50 | -1.69E-46 |
| MS.gene052496 | MS.gene27302 | 0.807084 | 6.01E-50 | -1.69E-46 |
| MS.gene052496 | MS.gene27571 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene052496 | MS.gene27919 | 0.806346 | 8.60E-50 | -1.69E-46 |
| MS.gene052496 | MS.gene30114 | 0.810219 | 1.29E-50 | -1.69E-46 |
| MS.gene052496 | MS.gene31952 | 0.929947 | 3.34E-93 | -1.69E-46 |
| MS.gene052496 | MS.gene33773 | 0.814945 | 1.19E-51 | -1.69E-46 |
| MS.gene052496 | MS.gene36082 | 0.811165 | 8.02E-51 | -1.69E-46 |
| MS.gene052496 | MS.gene36672 | 0.804481 | 2.12E-49 | -1.69E-46 |
| MS.gene052496 | MS.gene52855 | 0.81086 | 9.34E-51 | -1.69E-46 |
| MS.gene052496 | MS.gene62214 | 0.806174 | 9.35E-50 | -1.69E-46 |
| MS.gene052496 | MS.gene63327 | 0.807622 | 4.62E-50 | -1.69E-46 |
| MS.gene052496 | MS.gene68959 | 0.801445 | 8.98E-49 | -1.69E-46 |
| MS.gene052496 | MS.gene70331 | 0.80615 | 9.46E-50 | -1.69E-46 |
| MS.gene052496 | MS.gene86973 | 0.821036 | 5.00E-53 | -1.69E-46 |
| MS.gene052496 | MS.gene95255 | 0.801653 | 8.13E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 185 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTCCCACTTTACCTTTC+TGG | 0.053520 | 4.3:+23946191 | MS.gene052496:CDS |
| ACTTATGACATATTGGTTTC+TGG | 0.160583 | 4.3:+23948566 | MS.gene052496:CDS |
| ACTTGTAGTTCTATTCTTTA+TGG | 0.162261 | 4.3:+23946994 | MS.gene052496:CDS |
| TGCTTACAATGCTTTGATTA+AGG | 0.173641 | 4.3:+23947833 | MS.gene052496:CDS |
| ATTGCATAAACAATAGTATT+TGG | 0.176059 | 4.3:-23947507 | None:intergenic |
| ACGAGAAACTTGTGAGTAAT+TGG | 0.193103 | 4.3:-23948140 | None:intergenic |
| CTGTACAGTAACCGCGAATA+AGG | 0.232957 | 4.3:-23948367 | None:intergenic |
| TAAAGCAGTTGATGTGTTTA+GGG | 0.247070 | 4.3:+23947461 | MS.gene052496:CDS |
| ATTAACACATACTGCATAAA+AGG | 0.250660 | 4.3:+23947951 | MS.gene052496:CDS |
| GATTAAGGGGCTCTTGAGGC+TGG | 0.256997 | 4.3:+23947848 | MS.gene052496:CDS |
| CTTGATGGGTATTGCAAGTT+AGG | 0.270149 | 4.3:+23947324 | MS.gene052496:CDS |
| ATGTCGTATGTCAAAGAATT+AGG | 0.276339 | 4.3:-23948764 | None:intergenic |
| GTAAAGCAGTTGATGTGTTT+AGG | 0.286245 | 4.3:+23947460 | MS.gene052496:CDS |
| ATCACTAATAAGCACATTAT+AGG | 0.286957 | 4.3:-23948672 | None:intergenic |
| CATTTGAAAGACCTCCTAAA+AGG | 0.291710 | 4.3:-23948472 | None:intergenic |
| TGTTGCTGATGGTTTCATTA+AGG | 0.299466 | 4.3:+23947566 | MS.gene052496:CDS |
| GTATTGTAAGTATCAATATT+TGG | 0.301524 | 4.3:-23948449 | None:intergenic |
| GTTAAGGGTTATTGCAGAAT+TGG | 0.305623 | 4.3:+23946532 | MS.gene052496:intron |
| GCCGAATACGTGACACAGTT+TGG | 0.309657 | 4.3:-23947297 | None:intergenic |
| ATTAACTCACTGTTCAAATC+AGG | 0.310668 | 4.3:+23947114 | MS.gene052496:CDS |
| TCAGAAAGGGTTGGTTGATC+AGG | 0.312971 | 4.3:+23946441 | MS.gene052496:intron |
| TTGTTCACCTGCCCTAAAAT+AGG | 0.316710 | 4.3:-23947541 | None:intergenic |
| CGAGAAACTTGTGAGTAATT+GGG | 0.325885 | 4.3:-23948139 | None:intergenic |
| TGCCGCTACTTATGACATAT+TGG | 0.334250 | 4.3:+23948559 | MS.gene052496:CDS |
| TCAAAGCCAAATGGTTGTTC+GGG | 0.337420 | 4.3:+23947161 | MS.gene052496:CDS |
| CTCTTGCAGGTTGAGATAGA+TGG | 0.342092 | 4.3:+23950738 | MS.gene052496:intron |
| GAGATAGATGGCCAGGTCTA+TGG | 0.343135 | 4.3:+23950750 | MS.gene052496:CDS |
| GGGGTTACAAAAGATGTTAT+TGG | 0.349603 | 4.3:+23946601 | MS.gene052496:CDS |
| GCTTACAATGCTTTGATTAA+GGG | 0.351518 | 4.3:+23947834 | MS.gene052496:CDS |
| TATTCACAGATGTTTGTTGA+TGG | 0.353081 | 4.3:+23948419 | MS.gene052496:CDS |
| TTCAAAGCCAAATGGTTGTT+CGG | 0.356763 | 4.3:+23947160 | MS.gene052496:CDS |
| TTTAGCATATCCATTTATAA+TGG | 0.357268 | 4.3:-23947424 | None:intergenic |
| CCGAATACGTGACACAGTTT+GGG | 0.361882 | 4.3:-23947296 | None:intergenic |
| TGCCTCTGGTTTAGTTTCTC+AGG | 0.363725 | 4.3:+23946237 | MS.gene052496:CDS |
| CTGAAACCTCATCAGCAGTT+TGG | 0.368953 | 4.3:-23949625 | None:intergenic |
| GAAGAAAAGGTAATAACATT+TGG | 0.368985 | 4.3:-23947402 | None:intergenic |
| ATGTCATAAGTAGCGGCATT+TGG | 0.374237 | 4.3:-23948554 | None:intergenic |
| TCTTTCAAATGCTGGTTTGA+TGG | 0.374822 | 4.3:+23948484 | MS.gene052496:CDS |
| GTTTAGAGAGATGTATGAAA+TGG | 0.377748 | 4.3:+23947056 | MS.gene052496:CDS |
| TTTAGATGAAATGTTAGTTA+TGG | 0.379553 | 4.3:+23948103 | MS.gene052496:CDS |
| TATTTGGCTTAACATTCCTT+TGG | 0.382703 | 4.3:-23947491 | None:intergenic |
| AATTACGCTTCTCTAATAGA+TGG | 0.384244 | 4.3:+23947729 | MS.gene052496:CDS |
| CCCAAACTGTGTCACGTATT+CGG | 0.385635 | 4.3:+23947296 | MS.gene052496:CDS |
| AGATAAACCGCTCACTTAAA+CGG | 0.385807 | 4.3:+23948825 | MS.gene052496:CDS |
| ACGTATTCGGCATTGCTTGA+TGG | 0.393695 | 4.3:+23947309 | MS.gene052496:CDS |
| TGTTCAAGAATGATAGAATT+GGG | 0.394820 | 4.3:+23947894 | MS.gene052496:CDS |
| TTGTATCAATTCAATGCCTC+TGG | 0.395159 | 4.3:+23946223 | MS.gene052496:CDS |
| CAATGGAAAGAGCGGCTAAC+TGG | 0.398547 | 4.3:-23947770 | None:intergenic |
| TGATGGTTTCATTAAGGAAA+TGG | 0.403588 | 4.3:+23947572 | MS.gene052496:CDS |
| GCTGCGTACTGTAAATTTGT+TGG | 0.407227 | 4.3:+23946907 | MS.gene052496:CDS |
| TTGAACAACTTGAAAAGAGT+TGG | 0.407402 | 4.3:+23947639 | MS.gene052496:CDS |
| AAGAATGATAGAATTGGGTT+TGG | 0.408383 | 4.3:+23947899 | MS.gene052496:CDS |
| ATTGATGGGTATTGTGAAGC+TGG | 0.408593 | 4.3:+23946637 | MS.gene052496:CDS |
| GAAATTAGTTAGTGAGATGA+AGG | 0.409518 | 4.3:+23948517 | MS.gene052496:CDS |
| ATTGGCGGGCTTTGTAAAAC+TGG | 0.410338 | 4.3:+23948056 | MS.gene052496:CDS |
| GGAAATGGAATCGCGTAGAT+TGG | 0.416692 | 4.3:+23947587 | MS.gene052496:CDS |
| CGTATTCGGCATTGCTTGAT+GGG | 0.417354 | 4.3:+23947310 | MS.gene052496:CDS |
| AGAGAAAGTATGAGAGGCGG+TGG | 0.418832 | 4.3:-23946149 | None:intergenic |
| CTTATTCGCGGTTACTGTAC+AGG | 0.419018 | 4.3:+23948368 | MS.gene052496:CDS |
| TTAGGAGGTCTTTCAAATGC+TGG | 0.419391 | 4.3:+23948476 | MS.gene052496:CDS |
| TCCATTTATAATGGAAGAAA+AGG | 0.419712 | 4.3:-23947415 | None:intergenic |
| ATGTTCAAGAATGATAGAAT+TGG | 0.420281 | 4.3:+23947893 | MS.gene052496:CDS |
| AGTTACATGCACAGCTGTAA+TGG | 0.423791 | 4.3:+23947200 | MS.gene052496:CDS |
| TTCTCGTTAAAGCATATTCA+AGG | 0.424600 | 4.3:+23948156 | MS.gene052496:CDS |
| GTTCAAATCAGGGAGGGTTA+TGG | 0.430057 | 4.3:+23947125 | MS.gene052496:CDS |
| TTTAGAGAGATGTATGAAAT+GGG | 0.430199 | 4.3:+23947057 | MS.gene052496:CDS |
| TTAAGTGAGCGGTTTATCTC+TGG | 0.431840 | 4.3:-23948821 | None:intergenic |
| GTTATGTACAACTTGGTTGA+TGG | 0.431986 | 4.3:+23946577 | MS.gene052496:CDS |
| TTCTTGAACATACATATTGC+GGG | 0.433156 | 4.3:-23947881 | None:intergenic |
| TGAAGTGGGAACAAAACCTT+TGG | 0.433263 | 4.3:-23948645 | None:intergenic |
| GACATATTGGTTTCTGGCTA+TGG | 0.436003 | 4.3:+23948572 | MS.gene052496:CDS |
| AAATGCCCCGAACAACCATT+TGG | 0.436570 | 4.3:-23947167 | None:intergenic |
| TTGAATGACTTGCTGACAAA+AGG | 0.436959 | 4.3:+23948734 | MS.gene052496:CDS |
| TGAACAACTTGAAAAGAGTT+GGG | 0.438461 | 4.3:+23947640 | MS.gene052496:CDS |
| AGGCATTGAATTGATACAAA+AGG | 0.440214 | 4.3:-23946219 | None:intergenic |
| TGTCATAAGTAGCGGCATTT+GGG | 0.441601 | 4.3:-23948553 | None:intergenic |
| CGGAGTTGATTGAGAATAGC+TGG | 0.442263 | 4.3:+23946677 | MS.gene052496:CDS |
| ATTAAGGGGCTCTTGAGGCT+GGG | 0.444127 | 4.3:+23947849 | MS.gene052496:CDS |
| GGTTTGAATACCTTGATTGA+TGG | 0.449768 | 4.3:+23946622 | MS.gene052496:CDS |
| AGCCGCTCTTTCCATTGTCC+AGG | 0.449937 | 4.3:+23947776 | MS.gene052496:CDS |
| AGGTAAGACAGAAGATGCTT+TGG | 0.452252 | 4.3:+23947971 | MS.gene052496:CDS |
| CACGAGAAACTTGTCGCCTC+GGG | 0.457759 | 4.3:+23948209 | MS.gene052496:CDS |
| CTCTTTCATTTCCTGGACAA+TGG | 0.458908 | 4.3:-23947787 | None:intergenic |
| GTGTTATATGTAATACAATC+TGG | 0.460521 | 4.3:-23947924 | None:intergenic |
| AAAAGTGGTCCTTGATCAAA+TGG | 0.461446 | 4.3:+23948304 | MS.gene052496:CDS |
| GTAGCATACGAGACATGATT+AGG | 0.462142 | 4.3:-23947087 | None:intergenic |
| ATGTACAACTTGGTTGATGG+TGG | 0.462614 | 4.3:+23946580 | MS.gene052496:CDS |
| GCAGGTTGAGATAGATGGCC+AGG | 0.465212 | 4.3:+23950743 | MS.gene052496:intron |
| ATTAGTGATTATGCAAAAGC+TGG | 0.465567 | 4.3:+23948686 | MS.gene052496:CDS |
| TCATATATATACCTGAAAAT+CGG | 0.468990 | 4.3:-23949673 | None:intergenic |
| CAAAGTTGGGAAAACTAAAG+AGG | 0.471540 | 4.3:+23947233 | MS.gene052496:CDS |
| GAAGCGTAATTAACGATATC+CGG | 0.471937 | 4.3:-23947717 | None:intergenic |
| TGTACAGTAACCGCGAATAA+GGG | 0.478659 | 4.3:-23948366 | None:intergenic |
| CAGAAAGGGTTGGTTGATCA+GGG | 0.479081 | 4.3:+23946442 | MS.gene052496:intron |
| TTGATGGGTATTGTGAAGCT+GGG | 0.479144 | 4.3:+23946638 | MS.gene052496:CDS |
| ACTTACAATGCCCTTATTCG+CGG | 0.485014 | 4.3:+23948356 | MS.gene052496:CDS |
| GGCATTGAATTGATACAAAA+GGG | 0.488162 | 4.3:-23946218 | None:intergenic |
| ATGTTGTAAGTGACTGCATT+TGG | 0.490750 | 4.3:-23948029 | None:intergenic |
| CTTTATGGATTCTGCAGGCA+TGG | 0.494124 | 4.3:+23947009 | MS.gene052496:CDS |
| ATGGCCAGGTCTATGGTAAA+GGG | 0.494918 | 4.3:+23950757 | MS.gene052496:CDS |
| CTATTCTTTATGGATTCTGC+AGG | 0.497156 | 4.3:+23947004 | MS.gene052496:CDS |
| GATGGCCAGGTCTATGGTAA+AGG | 0.497354 | 4.3:+23950756 | MS.gene052496:CDS |
| TTGTCTGAAATGGTTAAAAG+AGG | 0.499419 | 4.3:+23946475 | MS.gene052496:CDS |
| CTTACAATGCTTTGATTAAG+GGG | 0.500261 | 4.3:+23947835 | MS.gene052496:CDS |
| GAACTACAAGTAACCACATC+CGG | 0.503519 | 4.3:-23946982 | None:intergenic |
| CAGGTTAGGGATGACTAGAA+AGG | 0.504615 | 4.3:+23948280 | MS.gene052496:CDS |
| GGGATTCTGTCAGAAAGGGT+TGG | 0.507465 | 4.3:+23946432 | MS.gene052496:intron |
| AGTTGATGTGTTTAGGGAGA+TGG | 0.508124 | 4.3:+23947467 | MS.gene052496:CDS |
| ATAGATGGCTACTTTAAAGA+AGG | 0.508178 | 4.3:+23947744 | MS.gene052496:CDS |
| TGTACAACTTGGTTGATGGT+GGG | 0.508416 | 4.3:+23946581 | MS.gene052496:CDS |
| GGGTTATTGCAGAATTGGAT+TGG | 0.509457 | 4.3:+23946537 | MS.gene052496:CDS |
| TAAACGGTCGTACGAAATTG+AGG | 0.512485 | 4.3:+23948841 | MS.gene052496:CDS |
| TATAAGCAGATGATTATGAA+TGG | 0.513274 | 4.3:+23946952 | MS.gene052496:CDS |
| TTAAGGGGCTCTTGAGGCTG+GGG | 0.514299 | 4.3:+23947850 | MS.gene052496:CDS |
| ATTTGAAAGACCTCCTAAAA+GGG | 0.514693 | 4.3:-23948471 | None:intergenic |
| GTTAGTGAGATGAAGGAAAG+AGG | 0.516470 | 4.3:+23948524 | MS.gene052496:CDS |
| GGTATTCCAGAAAGGTAAAG+TGG | 0.519414 | 4.3:-23946197 | None:intergenic |
| ACACAGTCAGGCTGAGTTCG+AGG | 0.521791 | 4.3:-23948232 | None:intergenic |
| CTTTGATTAAGGGGCTCTTG+AGG | 0.526346 | 4.3:+23947844 | MS.gene052496:CDS |
| CTTGAAAAGAGTTGGGAGGA+TGG | 0.526609 | 4.3:+23947647 | MS.gene052496:CDS |
| TCACGAGAAACTTGTCGCCT+CGG | 0.527820 | 4.3:+23948208 | MS.gene052496:CDS |
| GATATCCGGCTCTATACCCT+TGG | 0.532382 | 4.3:-23947703 | None:intergenic |
| AAATGCTGGTTTGATGGAAG+AGG | 0.532923 | 4.3:+23948490 | MS.gene052496:CDS |
| TGAATGAGATGAAGAGCTAC+GGG | 0.535524 | 4.3:+23948000 | MS.gene052496:CDS |
| ATTCTTGAACATACATATTG+CGG | 0.538061 | 4.3:-23947882 | None:intergenic |
| GTTTGAATACCTTGATTGAT+GGG | 0.538074 | 4.3:+23946623 | MS.gene052496:CDS |
| TACATTGAAATGATAACCAA+AGG | 0.538274 | 4.3:+23948629 | MS.gene052496:CDS |
| TTGAATGAGATGAAGAGCTA+CGG | 0.538353 | 4.3:+23947999 | MS.gene052496:CDS |
| TGATAATTTGAGCCATCCAC+AGG | 0.540194 | 4.3:-23948792 | None:intergenic |
| TGTAAGCAACAACATCAAAC+CGG | 0.541018 | 4.3:-23947818 | None:intergenic |
| CAGGTCTATGGTAAAGGGAC+TGG | 0.541160 | 4.3:+23950762 | MS.gene052496:CDS |
| TCTAAACAAAACTGCTGCCT+CGG | 0.547524 | 4.3:-23947040 | None:intergenic |
| TTCACAATACCCATCAATCA+AGG | 0.549908 | 4.3:-23946632 | None:intergenic |
| GAGAAACTTGTGAGTAATTG+GGG | 0.550901 | 4.3:-23948138 | None:intergenic |
| AACTTGTGAGTAATTGGGGT+TGG | 0.551261 | 4.3:-23948134 | None:intergenic |
| ATGGGATGTGGCTAAAATGC+AGG | 0.554857 | 4.3:+23950791 | MS.gene052496:CDS |
| GAAAAGGTAATAACATTTGG+AGG | 0.556698 | 4.3:-23947399 | None:intergenic |
| GACTGGATTAACATGGGATG+TGG | 0.558860 | 4.3:+23950779 | MS.gene052496:CDS |
| TTAACTCACTGTTCAAATCA+GGG | 0.560437 | 4.3:+23947115 | MS.gene052496:CDS |
| TACAAAAGGGTATTCCAGAA+AGG | 0.568449 | 4.3:-23946205 | None:intergenic |
| AATTAAAGATATGCACTCCA+AGG | 0.568614 | 4.3:+23947686 | MS.gene052496:CDS |
| AATGGAATCGCGTAGATTGG+AGG | 0.568740 | 4.3:+23947590 | MS.gene052496:CDS |
| ATTGGTTCAATATGCTGAGT+GGG | 0.569320 | 4.3:+23946555 | MS.gene052496:CDS |
| GTACAACTTGGTTGATGGTG+GGG | 0.570164 | 4.3:+23946582 | MS.gene052496:CDS |
| GATGACTAGAAAGGCAAAAG+TGG | 0.572349 | 4.3:+23948289 | MS.gene052496:CDS |
| TTAGTGTGTTATACACAGTC+AGG | 0.572360 | 4.3:-23948244 | None:intergenic |
| GAATGGAATCATGCCGGATG+TGG | 0.577442 | 4.3:+23946969 | MS.gene052496:CDS |
| GCACTCCAAGGGTATAGAGC+CGG | 0.578517 | 4.3:+23947698 | MS.gene052496:CDS |
| TACAGGAAGTCACGTGGAGA+AGG | 0.579113 | 4.3:+23948385 | MS.gene052496:CDS |
| GTAAAACGGGTGATCTTACG+AGG | 0.582839 | 4.3:+23946755 | MS.gene052496:CDS |
| ACATACGACATTCTAACCTG+TGG | 0.585608 | 4.3:+23948776 | MS.gene052496:CDS |
| TATAGACCAAACTGCTGATG+AGG | 0.586581 | 4.3:+23949619 | MS.gene052496:intron |
| TGGGAAAACTAAAGAGGCTG+AGG | 0.588473 | 4.3:+23947239 | MS.gene052496:CDS |
| CAGTCCCTTTACCATAGACC+TGG | 0.590939 | 4.3:-23950761 | None:intergenic |
| CTCACTGTTCAAATCAGGGA+GGG | 0.592583 | 4.3:+23947119 | MS.gene052496:CDS |
| TTGGGAGGATGGATGAAGCT+CGG | 0.610757 | 4.3:+23947658 | MS.gene052496:CDS |
| ACGACATTCTAACCTGTGGA+TGG | 0.615748 | 4.3:+23948780 | MS.gene052496:CDS |
| CAGGCTGAGTTCGAGGCCCG+AGG | 0.616345 | 4.3:-23948225 | None:intergenic |
| ACATGCACAGCTGTAATGGA+TGG | 0.618755 | 4.3:+23947204 | MS.gene052496:CDS |
| CGTACGACCGTTTAAGTGAG+CGG | 0.620079 | 4.3:-23948832 | None:intergenic |
| CTTGATCAAATGGTAAAACG+TGG | 0.621947 | 4.3:+23948314 | MS.gene052496:CDS |
| GTAAAGGGACTGGATTAACA+TGG | 0.626102 | 4.3:+23950772 | MS.gene052496:CDS |
| CAAAGCCAAATGGTTGTTCG+GGG | 0.626935 | 4.3:+23947162 | MS.gene052496:CDS |
| TTCCTGGACAATGGAAAGAG+CGG | 0.629054 | 4.3:-23947778 | None:intergenic |
| AACCAATATGTCATAAGTAG+CGG | 0.633569 | 4.3:-23948561 | None:intergenic |
| ATTAAAGATATGCACTCCAA+GGG | 0.637616 | 4.3:+23947687 | MS.gene052496:CDS |
| GTATTCCAGAAAGGTAAAGT+GGG | 0.642595 | 4.3:-23946196 | None:intergenic |
| TGGGTTGATGAGTCAAGCAA+CGG | 0.643617 | 4.3:+23946657 | MS.gene052496:CDS |
| GATTATGAATGGAATCATGC+CGG | 0.644760 | 4.3:+23946963 | MS.gene052496:CDS |
| GGTGAACAAGATGTTGCTGA+TGG | 0.652958 | 4.3:+23947555 | MS.gene052496:CDS |
| TACCTGAGAAACTAAACCAG+AGG | 0.653438 | 4.3:-23946239 | None:intergenic |
| ACAACTTGAAAAGAGTTGGG+AGG | 0.654594 | 4.3:+23947643 | MS.gene052496:CDS |
| CGAATACGTGACACAGTTTG+GGG | 0.660318 | 4.3:-23947295 | None:intergenic |
| TGTTTAGGGAGATGGTCCAA+AGG | 0.660827 | 4.3:+23947475 | MS.gene052496:CDS |
| GTTGTGTATGTGACAAGCGT+AGG | 0.663710 | 4.3:-23946877 | None:intergenic |
| CATGTGAGAGAAAGTATGAG+AGG | 0.667712 | 4.3:-23946155 | None:intergenic |
| TAAAGGGACTGGATTAACAT+GGG | 0.671970 | 4.3:+23950773 | MS.gene052496:CDS |
| GATTGGTTCAATATGCTGAG+TGG | 0.689360 | 4.3:+23946554 | MS.gene052496:CDS |
| TGAGTGGGTTATGTACAACT+TGG | 0.698158 | 4.3:+23946570 | MS.gene052496:CDS |
| CAGGCATGGTAAACTAACCG+AGG | 0.703160 | 4.3:+23947023 | MS.gene052496:CDS |
| ACTCACTGTTCAAATCAGGG+AGG | 0.704684 | 4.3:+23947118 | MS.gene052496:CDS |
| GTGAGAGAAAGTATGAGAGG+CGG | 0.706297 | 4.3:-23946152 | None:intergenic |
| TTACTGTACAGGAAGTCACG+TGG | 0.714623 | 4.3:+23948379 | MS.gene052496:CDS |
| TAAAACGGGTGATCTTACGA+GGG | 0.715778 | 4.3:+23946756 | MS.gene052496:CDS |
| AGTTGATTGAGAATAGCTGG+AGG | 0.720720 | 4.3:+23946680 | MS.gene052496:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACATATAATACTGTTATT+TGG | + | chr4.3:23946410-23946429 | MS.gene052496:intron | 15.0% |
| !!! | TACATATAATACTGTTATTT+GGG | + | chr4.3:23946411-23946430 | MS.gene052496:intron | 15.0% |
| !!! | TTCTTGTCTTTTTTTAATAA+TGG | + | chr4.3:23950681-23950700 | MS.gene052496:intron | 15.0% |
| !! | AAAAAATTGCTGATAGAAAT+GGG | + | chr4.3:23948866-23948885 | MS.gene052496:intron | 20.0% |
| !! | ACTTGTAATATACTAGTTAA+GGG | + | chr4.3:23946517-23946536 | MS.gene052496:intron | 20.0% |
| !! | ATAAATGGATATGCTAAAAA+AGG | + | chr4.3:23947429-23947448 | MS.gene052496:CDS | 20.0% |
| !! | ATGGGACTTATAATTTATAA+AGG | + | chr4.3:23950583-23950602 | MS.gene052496:intron | 20.0% |
| !! | ATTGCATAAACAATAGTATT+TGG | - | chr4.3:23947510-23947529 | None:intergenic | 20.0% |
| !! | GTATTGTAAGTATCAATATT+TGG | - | chr4.3:23948452-23948471 | None:intergenic | 20.0% |
| !! | TCATATATATACCTGAAAAT+CGG | - | chr4.3:23949676-23949695 | None:intergenic | 20.0% |
| !! | TCATTTACTAAATGAAATCT+GGG | + | chr4.3:23950515-23950534 | MS.gene052496:intron | 20.0% |
| !! | TGGAAAGAAAATAAATGTAA+CGG | - | chr4.3:23949939-23949958 | None:intergenic | 20.0% |
| !! | TTATAAATTATAAGTCCCAT+TGG | - | chr4.3:23950583-23950602 | None:intergenic | 20.0% |
| !! | TTTAGATGAAATGTTAGTTA+TGG | + | chr4.3:23948103-23948122 | MS.gene052496:CDS | 20.0% |
| !! | TTTAGCATATCCATTTATAA+TGG | - | chr4.3:23947427-23947446 | None:intergenic | 20.0% |
| !!! | ACATATAATACTGTTATTTG+GGG | + | chr4.3:23946412-23946431 | MS.gene052496:intron | 20.0% |
| !!! | ACTATTCTTATTTTTGTACT+GGG | + | chr4.3:23950461-23950480 | MS.gene052496:intron | 20.0% |
| !!! | ATAGACATTTTGTTTATGTT+TGG | + | chr4.3:23950347-23950366 | MS.gene052496:intron | 20.0% |
| !!! | TACTATTCTTATTTTTGTAC+TGG | + | chr4.3:23950460-23950479 | MS.gene052496:intron | 20.0% |
| !!! | TTATGATGTCAAATTTTGTT+TGG | + | chr4.3:23949820-23949839 | MS.gene052496:intron | 20.0% |
| !!! | TTTAATTGATGCCTATTTTA+GGG | + | chr4.3:23947530-23947549 | MS.gene052496:CDS | 20.0% |
| !!! | TTTTAATTGATGCCTATTTT+AGG | + | chr4.3:23947529-23947548 | MS.gene052496:CDS | 20.0% |
| ! | AAAAATTGCTGATAGAAATG+GGG | + | chr4.3:23948867-23948886 | MS.gene052496:intron | 25.0% |
| ! | AAATGAAAGAGAAAAACATC+CGG | + | chr4.3:23947799-23947818 | MS.gene052496:CDS | 25.0% |
| ! | AGAGTTAGTGTTACAAAAAA+TGG | + | chr4.3:23947362-23947381 | MS.gene052496:CDS | 25.0% |
| ! | AGTAAACCACATAAATAGAA+GGG | - | chr4.3:23950444-23950463 | None:intergenic | 25.0% |
| ! | ATAATTTATAAAGGATGACC+TGG | + | chr4.3:23950592-23950611 | MS.gene052496:intron | 25.0% |
| ! | ATCACTAATAAGCACATTAT+AGG | - | chr4.3:23948675-23948694 | None:intergenic | 25.0% |
| ! | ATGTTCAAGAATGATAGAAT+TGG | + | chr4.3:23947893-23947912 | MS.gene052496:CDS | 25.0% |
| ! | ATTAACACATACTGCATAAA+AGG | + | chr4.3:23947951-23947970 | MS.gene052496:CDS | 25.0% |
| ! | ATTCTTGAACATACATATTG+CGG | - | chr4.3:23947885-23947904 | None:intergenic | 25.0% |
| ! | CACTTGTAATATACTAGTTA+AGG | + | chr4.3:23946516-23946535 | MS.gene052496:intron | 25.0% |
| ! | CTCATTTACTAAATGAAATC+TGG | + | chr4.3:23950514-23950533 | MS.gene052496:intron | 25.0% |
| ! | GAAAAAATTGCTGATAGAAA+TGG | + | chr4.3:23948865-23948884 | MS.gene052496:intron | 25.0% |
| ! | GAAGAAAAGGTAATAACATT+TGG | - | chr4.3:23947405-23947424 | None:intergenic | 25.0% |
| ! | GTGTTATATGTAATACAATC+TGG | - | chr4.3:23947927-23947946 | None:intergenic | 25.0% |
| ! | TAAACAAGACACCATAATTA+AGG | - | chr4.3:23950630-23950649 | None:intergenic | 25.0% |
| ! | TAAAGAACTAAAACACACAA+AGG | - | chr4.3:23950296-23950315 | None:intergenic | 25.0% |
| ! | TAAATTTAGCAAAAAAGCTG+AGG | + | chr4.3:23948901-23948920 | MS.gene052496:intron | 25.0% |
| ! | TACATTGAAATGATAACCAA+AGG | + | chr4.3:23948629-23948648 | MS.gene052496:CDS | 25.0% |
| ! | TAGTAAACCACATAAATAGA+AGG | - | chr4.3:23950445-23950464 | None:intergenic | 25.0% |
| ! | TATAAGCAGATGATTATGAA+TGG | + | chr4.3:23946952-23946971 | MS.gene052496:CDS | 25.0% |
| ! | TATGTATCATACTGAAAAGA+TGG | + | chr4.3:23949787-23949806 | MS.gene052496:intron | 25.0% |
| ! | TCCAACAAGAAAATTAAGTA+TGG | - | chr4.3:23949959-23949978 | None:intergenic | 25.0% |
| ! | TGGTCTGAACTAATTTAAAA+AGG | + | chr4.3:23950227-23950246 | MS.gene052496:intron | 25.0% |
| ! | TGTTCAAGAATGATAGAATT+GGG | + | chr4.3:23947894-23947913 | MS.gene052496:CDS | 25.0% |
| ! | TTGTCTTACTTAAATTTACG+CGG | + | chr4.3:23949909-23949928 | MS.gene052496:intron | 25.0% |
| ! | TTTAGAGAGATGTATGAAAT+GGG | + | chr4.3:23947057-23947076 | MS.gene052496:CDS | 25.0% |
| !! | ACCTTTTCTTCCATTATAAA+TGG | + | chr4.3:23947414-23947433 | MS.gene052496:CDS | 25.0% |
| !! | ACTTGTAGTTCTATTCTTTA+TGG | + | chr4.3:23946994-23947013 | MS.gene052496:CDS | 25.0% |
| !! | ATAGTTCAGATATTTTATCC+TGG | - | chr4.3:23950412-23950431 | None:intergenic | 25.0% |
| !! | ATCTCTTTTCAATGAGATTT+TGG | + | chr4.3:23946783-23946802 | MS.gene052496:CDS | 25.0% |
| !! | CTGAACAAGTTTTTATAAGT+GGG | + | chr4.3:23949200-23949219 | MS.gene052496:intron | 25.0% |
| !! | CTTAAAGCTTTTTGTAAAAC+GGG | + | chr4.3:23946742-23946761 | MS.gene052496:CDS | 25.0% |
| !! | CTTTTCAGTATGATACATAT+TGG | - | chr4.3:23949786-23949805 | None:intergenic | 25.0% |
| !! | GCTTAAAGCTTTTTGTAAAA+CGG | + | chr4.3:23946741-23946760 | MS.gene052496:CDS | 25.0% |
| !! | TCCATACTTAATTTTCTTGT+TGG | + | chr4.3:23949955-23949974 | MS.gene052496:intron | 25.0% |
| !! | TCCATTTATAATGGAAGAAA+AGG | - | chr4.3:23947418-23947437 | None:intergenic | 25.0% |
| !! | TCTCTTTTCAATGAGATTTT+GGG | + | chr4.3:23946784-23946803 | MS.gene052496:CDS | 25.0% |
| !! | TGAACAAGTTTTTATAAGTG+GGG | + | chr4.3:23949201-23949220 | MS.gene052496:intron | 25.0% |
| !! | TGTTTTCAGTGTTAATGTTT+TGG | + | chr4.3:23946306-23946325 | MS.gene052496:intron | 25.0% |
| !! | TTAGTTCTTTACTCATTTGA+GGG | + | chr4.3:23950305-23950324 | MS.gene052496:intron | 25.0% |
| !! | TTTTAATCTTCAAAGCCAAA+TGG | + | chr4.3:23947152-23947171 | MS.gene052496:CDS | 25.0% |
| !!! | ACATTATAGGTTTTTGAAGT+GGG | - | chr4.3:23948662-23948681 | None:intergenic | 25.0% |
| !!! | CTTTTTTAGAAATTGTGGTT+GGG | - | chr4.3:23949270-23949289 | None:intergenic | 25.0% |
| !!! | TGACACTTTGTTATTAGTTA+GGG | + | chr4.3:23950653-23950672 | MS.gene052496:intron | 25.0% |
| !!! | TGTATTTTTTGTCTGTTAGA+CGG | + | chr4.3:23950378-23950397 | MS.gene052496:intron | 25.0% |
| !!! | TTTAGTTCTTTACTCATTTG+AGG | + | chr4.3:23950304-23950323 | MS.gene052496:intron | 25.0% |
| !!! | TTTTTTCCCTTCTATTTATG+TGG | + | chr4.3:23950435-23950454 | MS.gene052496:intron | 25.0% |
| AACCAATATGTCATAAGTAG+CGG | - | chr4.3:23948564-23948583 | None:intergenic | 30.0% | |
| AAGAATGATAGAATTGGGTT+TGG | + | chr4.3:23947899-23947918 | MS.gene052496:CDS | 30.0% | |
| AAGACAACGCATATAAGATA+CGG | - | chr4.3:23949896-23949915 | None:intergenic | 30.0% | |
| AATTAAAGATATGCACTCCA+AGG | + | chr4.3:23947686-23947705 | MS.gene052496:CDS | 30.0% | |
| AATTACGCTTCTCTAATAGA+TGG | + | chr4.3:23947729-23947748 | MS.gene052496:CDS | 30.0% | |
| ACATTAACACTGAAAACATC+AGG | - | chr4.3:23946304-23946323 | None:intergenic | 30.0% | |
| AGTGTTACAAAAAATGGAGA+AGG | + | chr4.3:23947368-23947387 | MS.gene052496:CDS | 30.0% | |
| ATAATGGTAACAAAAAGCTC+TGG | + | chr4.3:23950697-23950716 | MS.gene052496:intron | 30.0% | |
| ATCATACTGAAAAGATGGAT+TGG | + | chr4.3:23949792-23949811 | MS.gene052496:intron | 30.0% | |
| ATGTCGTATGTCAAAGAATT+AGG | - | chr4.3:23948767-23948786 | None:intergenic | 30.0% | |
| ATTAAAGATATGCACTCCAA+GGG | + | chr4.3:23947687-23947706 | MS.gene052496:CDS | 30.0% | |
| ATTAACTCACTGTTCAAATC+AGG | + | chr4.3:23947114-23947133 | MS.gene052496:CDS | 30.0% | |
| ATTAGTGATTATGCAAAAGC+TGG | + | chr4.3:23948686-23948705 | MS.gene052496:CDS | 30.0% | |
| ATTTGAAAGACCTCCTAAAA+GGG | - | chr4.3:23948474-23948493 | None:intergenic | 30.0% | |
| CACTTATAAACACTTGTTCA+GGG | - | chr4.3:23948966-23948985 | None:intergenic | 30.0% | |
| CTGAACAAGTGTTTATAAGT+GGG | + | chr4.3:23948965-23948984 | MS.gene052496:intron | 30.0% | |
| CTTACAATGCTTTGATTAAG+GGG | + | chr4.3:23947835-23947854 | MS.gene052496:CDS | 30.0% | |
| CTTTCTTAGAAATTGTGGTT+GGG | - | chr4.3:23949504-23949523 | None:intergenic | 30.0% | |
| GAAAAGGTAATAACATTTGG+AGG | - | chr4.3:23947402-23947421 | None:intergenic | 30.0% | |
| GAAATTAGTTAGTGAGATGA+AGG | + | chr4.3:23948517-23948536 | MS.gene052496:CDS | 30.0% | |
| GAACAAGTGTTTATAAGTGA+GGG | + | chr4.3:23948967-23948986 | MS.gene052496:intron | 30.0% | |
| GCTTACAATGCTTTGATTAA+GGG | + | chr4.3:23947834-23947853 | MS.gene052496:CDS | 30.0% | |
| GTATTGCAAGTTAGGAAAAA+TGG | + | chr4.3:23947332-23947351 | MS.gene052496:CDS | 30.0% | |
| GTTTAGAGAGATGTATGAAA+TGG | + | chr4.3:23947056-23947075 | MS.gene052496:CDS | 30.0% | |
| GTTTGAATACCTTGATTGAT+GGG | + | chr4.3:23946623-23946642 | MS.gene052496:CDS | 30.0% | |
| TAGTTCTTTACTCATTTGAG+GGG | + | chr4.3:23950306-23950325 | MS.gene052496:intron | 30.0% | |
| TCACTTATAAACACTTGTTC+AGG | - | chr4.3:23948967-23948986 | None:intergenic | 30.0% | |
| TCATGCTTTCTTAGAAATTG+TGG | - | chr4.3:23949509-23949528 | None:intergenic | 30.0% | |
| TGAACAACTTGAAAAGAGTT+GGG | + | chr4.3:23947640-23947659 | MS.gene052496:CDS | 30.0% | |
| TGAACAAGTGTTTATAAGTG+AGG | + | chr4.3:23948966-23948985 | MS.gene052496:intron | 30.0% | |
| TGAACAAGTGTTTATAAGTG+GGG | + | chr4.3:23948966-23948985 | MS.gene052496:intron | 30.0% | |
| TGATGGTTTCATTAAGGAAA+TGG | + | chr4.3:23947572-23947591 | MS.gene052496:CDS | 30.0% | |
| TGCTTACAATGCTTTGATTA+AGG | + | chr4.3:23947833-23947852 | MS.gene052496:CDS | 30.0% | |
| TTAACTCACTGTTCAAATCA+GGG | + | chr4.3:23947115-23947134 | MS.gene052496:CDS | 30.0% | |
| TTCTCGTTAAAGCATATTCA+AGG | + | chr4.3:23948156-23948175 | MS.gene052496:CDS | 30.0% | |
| TTCTTGAACATACATATTGC+GGG | - | chr4.3:23947884-23947903 | None:intergenic | 30.0% | |
| TTGAACAACTTGAAAAGAGT+TGG | + | chr4.3:23947639-23947658 | MS.gene052496:CDS | 30.0% | |
| ! | ATAGATGGCTACTTTAAAGA+AGG | + | chr4.3:23947744-23947763 | MS.gene052496:CDS | 30.0% |
| ! | CCACTTATAAAAACTTGTTC+AGG | - | chr4.3:23949202-23949221 | None:intergenic | 30.0% |
| ! | CCTGAACAAGTTTTTATAAG+TGG | + | chr4.3:23949199-23949218 | MS.gene052496:intron | 30.0% |
| ! | CTAACTAATAACAAAGTGTC+AGG | - | chr4.3:23950654-23950673 | None:intergenic | 30.0% |
| ! | GAACAAGTTTTTATAAGTGG+GGG | + | chr4.3:23949202-23949221 | MS.gene052496:intron | 30.0% |
| ! | GATACTTACAATACCCTTTT+AGG | + | chr4.3:23948458-23948477 | MS.gene052496:CDS | 30.0% |
| ! | GGCATTGAATTGATACAAAA+GGG | - | chr4.3:23946221-23946240 | None:intergenic | 30.0% |
| ! | TAAAGCAGTTGATGTGTTTA+GGG | + | chr4.3:23947461-23947480 | MS.gene052496:CDS | 30.0% |
| ! | TATTCACAGATGTTTGTTGA+TGG | + | chr4.3:23948419-23948438 | MS.gene052496:CDS | 30.0% |
| ! | TATTTGGCTTAACATTCCTT+TGG | - | chr4.3:23947494-23947513 | None:intergenic | 30.0% |
| ! | TCATACTGAAAAGATGGATT+GGG | + | chr4.3:23949793-23949812 | MS.gene052496:intron | 30.0% |
| ! | TGTTTAAGACTGAGTTATTG+AGG | - | chr4.3:23949587-23949606 | None:intergenic | 30.0% |
| ! | TGTTTTTCTCTTTCATTTCC+TGG | - | chr4.3:23947797-23947816 | None:intergenic | 30.0% |
| ! | TTGTCTGAAATGGTTAAAAG+AGG | + | chr4.3:23946475-23946494 | MS.gene052496:CDS | 30.0% |
| ! | TTTAACATGTTTTCTCTTGC+AGG | + | chr4.3:23950725-23950744 | MS.gene052496:intron | 30.0% |
| ! | TTTTAGTCTGTTGTCTGAAA+TGG | + | chr4.3:23946465-23946484 | MS.gene052496:CDS | 30.0% |
| !! | ACTTATGACATATTGGTTTC+TGG | + | chr4.3:23948566-23948585 | MS.gene052496:CDS | 30.0% |
| !! | AGGCATTGAATTGATACAAA+AGG | - | chr4.3:23946222-23946241 | None:intergenic | 30.0% |
| !! | ATTTGGCTTTAGGATATCTT+AGG | + | chr4.3:23946359-23946378 | MS.gene052496:intron | 30.0% |
| !! | CACATTATAGGTTTTTGAAG+TGG | - | chr4.3:23948663-23948682 | None:intergenic | 30.0% |
| !! | CTGACACTTTGTTATTAGTT+AGG | + | chr4.3:23950652-23950671 | MS.gene052496:intron | 30.0% |
| !! | GTCACTTACAACATTTTGAT+TGG | + | chr4.3:23948038-23948057 | MS.gene052496:CDS | 30.0% |
| !! | TAAAGTTGGTGATTTGGATT+TGG | + | chr4.3:23946342-23946361 | MS.gene052496:intron | 30.0% |
| !!! | ACTTACAACATTTTGATTGG+CGG | + | chr4.3:23948041-23948060 | MS.gene052496:CDS | 30.0% |
| !!! | GCTTTTTTAGAAATTGTGGT+TGG | - | chr4.3:23949271-23949290 | None:intergenic | 30.0% |
| !!! | TATTCTGATATGCTGTTTTC+TGG | + | chr4.3:23946271-23946290 | MS.gene052496:intron | 30.0% |
| !!! | TCAATGAGATTTTGGGATTT+TGG | + | chr4.3:23946791-23946810 | MS.gene052496:CDS | 30.0% |
| !!! | TCGTGCTTTTTTAGAAATTG+TGG | - | chr4.3:23949275-23949294 | None:intergenic | 30.0% |
| AAAAGTGGTCCTTGATCAAA+TGG | + | chr4.3:23948304-23948323 | MS.gene052496:CDS | 35.0% | |
| AAGACTGAGTTATTGAGGAT+TGG | - | chr4.3:23949582-23949601 | None:intergenic | 35.0% | |
| ACAATAAATCCCCAGAAACA+TGG | - | chr4.3:23950079-23950098 | None:intergenic | 35.0% | |
| ACGAGAAACTTGTGAGTAAT+TGG | - | chr4.3:23948143-23948162 | None:intergenic | 35.0% | |
| AGATAAACCGCTCACTTAAA+CGG | + | chr4.3:23948825-23948844 | MS.gene052496:CDS | 35.0% | |
| ATGTTGTAAGTGACTGCATT+TGG | - | chr4.3:23948032-23948051 | None:intergenic | 35.0% | |
| CAAAGTTGGGAAAACTAAAG+AGG | + | chr4.3:23947233-23947252 | MS.gene052496:CDS | 35.0% | |
| CAAATCACCAACTTTACACA+AGG | - | chr4.3:23946338-23946357 | None:intergenic | 35.0% | |
| CATTTGAAAGACCTCCTAAA+AGG | - | chr4.3:23948475-23948494 | None:intergenic | 35.0% | |
| CCACTTATAAACACTTGTTC+AGG | - | chr4.3:23949436-23949455 | None:intergenic | 35.0% | |
| CCTGAACAAGTGTTTATAAG+TGG | + | chr4.3:23948964-23948983 | MS.gene052496:intron | 35.0% | |
| CGAGAAACTTGTGAGTAATT+GGG | - | chr4.3:23948142-23948161 | None:intergenic | 35.0% | |
| CTATTCTTTATGGATTCTGC+AGG | + | chr4.3:23947004-23947023 | MS.gene052496:CDS | 35.0% | |
| CTTGATCAAATGGTAAAACG+TGG | + | chr4.3:23948314-23948333 | MS.gene052496:CDS | 35.0% | |
| CTTTGATAGACACACCATTA+GGG | + | chr4.3:23949301-23949320 | MS.gene052496:intron | 35.0% | |
| GAACAAGTGTTTATAAGTGG+GGG | + | chr4.3:23949436-23949455 | MS.gene052496:intron | 35.0% | |
| GAAGCGTAATTAACGATATC+CGG | - | chr4.3:23947720-23947739 | None:intergenic | 35.0% | |
| GAGAAACTTGTGAGTAATTG+GGG | - | chr4.3:23948141-23948160 | None:intergenic | 35.0% | |
| GATTATGAATGGAATCATGC+CGG | + | chr4.3:23946963-23946982 | MS.gene052496:CDS | 35.0% | |
| GCTTTCTTAGAAATTGTGGT+TGG | - | chr4.3:23949505-23949524 | None:intergenic | 35.0% | |
| GGGGTTACAAAAGATGTTAT+TGG | + | chr4.3:23946601-23946620 | MS.gene052496:CDS | 35.0% | |
| GGTTTGAATACCTTGATTGA+TGG | + | chr4.3:23946622-23946641 | MS.gene052496:CDS | 35.0% | |
| GTATTCCAGAAAGGTAAAGT+GGG | - | chr4.3:23946199-23946218 | None:intergenic | 35.0% | |
| GTTAAGGGTTATTGCAGAAT+TGG | + | chr4.3:23946532-23946551 | MS.gene052496:intron | 35.0% | |
| GTTATGTACAACTTGGTTGA+TGG | + | chr4.3:23946577-23946596 | MS.gene052496:CDS | 35.0% | |
| GTTCATTCCTTGTGTAAAGT+TGG | + | chr4.3:23946328-23946347 | MS.gene052496:intron | 35.0% | |
| TAAAGGGACTGGATTAACAT+GGG | + | chr4.3:23950773-23950792 | MS.gene052496:CDS | 35.0% | |
| TACAGTTTCATAACCCCTAA+TGG | - | chr4.3:23949552-23949571 | None:intergenic | 35.0% | |
| TGATACCATCTTAGAAATCG+TGG | - | chr4.3:23949040-23949059 | None:intergenic | 35.0% | |
| TGTAAGCAACAACATCAAAC+CGG | - | chr4.3:23947821-23947840 | None:intergenic | 35.0% | |
| TGTTGCTGATGGTTTCATTA+AGG | + | chr4.3:23947566-23947585 | MS.gene052496:CDS | 35.0% | |
| TTAAGAATCCCACATTGGAT+GGG | + | chr4.3:23949170-23949189 | MS.gene052496:intron | 35.0% | |
| TTAAGAGTCTCACATTGGAT+GGG | + | chr4.3:23949404-23949423 | MS.gene052496:intron | 35.0% | |
| TTAGTGTGTTATACACAGTC+AGG | - | chr4.3:23948247-23948266 | None:intergenic | 35.0% | |
| TTCAAAGCCAAATGGTTGTT+CGG | + | chr4.3:23947160-23947179 | MS.gene052496:CDS | 35.0% | |
| TTCACAATACCCATCAATCA+AGG | - | chr4.3:23946635-23946654 | None:intergenic | 35.0% | |
| TTGAATGAGATGAAGAGCTA+CGG | + | chr4.3:23947999-23948018 | MS.gene052496:CDS | 35.0% | |
| TTGTATCAATTCAATGCCTC+TGG | + | chr4.3:23946223-23946242 | MS.gene052496:CDS | 35.0% | |
| TTTGATAGACACACCATTAG+GGG | + | chr4.3:23949302-23949321 | MS.gene052496:intron | 35.0% | |
| ! | ACTTACAATACCCTTTTAGG+AGG | + | chr4.3:23948461-23948480 | MS.gene052496:CDS | 35.0% |
| ! | ATTGGTTCAATATGCTGAGT+GGG | + | chr4.3:23946555-23946574 | MS.gene052496:CDS | 35.0% |
| ! | CACGTTTTACCATTTGATCA+AGG | - | chr4.3:23948316-23948335 | None:intergenic | 35.0% |
| ! | GTAAAGCAGTTGATGTGTTT+AGG | + | chr4.3:23947460-23947479 | MS.gene052496:CDS | 35.0% |
| ! | TTGGTAATCAAATGCTTCAG+TGG | + | chr4.3:23950207-23950226 | MS.gene052496:intron | 35.0% |
| ! | TTTTGTACTGGGAAGTTGTA+GGG | + | chr4.3:23950472-23950491 | MS.gene052496:intron | 35.0% |
| ! | TTTTTGTACTGGGAAGTTGT+AGG | + | chr4.3:23950471-23950490 | MS.gene052496:intron | 35.0% |
| ! | TTTTTGTCTGTTAGACGGTT+TGG | + | chr4.3:23950383-23950402 | MS.gene052496:intron | 35.0% |
| !! | ATGGATGGACTTTTCAAAGT+TGG | + | chr4.3:23947219-23947238 | MS.gene052496:CDS | 35.0% |
| !! | CTTGTGTAAAGTTGGTGATT+TGG | + | chr4.3:23946336-23946355 | MS.gene052496:intron | 35.0% |
| !! | GATTTTGGAAAGACGAAGAT+CGG | + | chr4.3:23946806-23946825 | MS.gene052496:CDS | 35.0% |
| !! | TACAAAAGGGTATTCCAGAA+AGG | - | chr4.3:23946208-23946227 | None:intergenic | 35.0% |
| !! | TAGGGTAGTAGTCTTGTTAA+TGG | + | chr4.3:23950546-23950565 | MS.gene052496:intron | 35.0% |
| !! | TCTTTCAAATGCTGGTTTGA+TGG | + | chr4.3:23948484-23948503 | MS.gene052496:CDS | 35.0% |
| !! | TGGATGGACTTTTCAAAGTT+GGG | + | chr4.3:23947220-23947239 | MS.gene052496:CDS | 35.0% |
| !! | TTGAATGACTTGCTGACAAA+AGG | + | chr4.3:23948734-23948753 | MS.gene052496:CDS | 35.0% |
| !!! | CACACAAAGGTTTTGAAAGA+AGG | - | chr4.3:23950283-23950302 | None:intergenic | 35.0% |
| !!! | CTTACAACATTTTGATTGGC+GGG | + | chr4.3:23948042-23948061 | MS.gene052496:CDS | 35.0% |
| AACTTGTGAGTAATTGGGGT+TGG | - | chr4.3:23948137-23948156 | None:intergenic | 40.0% | |
| ACAACTTGAAAAGAGTTGGG+AGG | + | chr4.3:23947643-23947662 | MS.gene052496:CDS | 40.0% | |
| ACATACGACATTCTAACCTG+TGG | + | chr4.3:23948776-23948795 | MS.gene052496:CDS | 40.0% | |
| ACCATCTTAGAAATCGTGGT+CGG | - | chr4.3:23949036-23949055 | None:intergenic | 40.0% | |
| ACTAAATGAAATCTGGGCTC+AGG | + | chr4.3:23950521-23950540 | MS.gene052496:intron | 40.0% | |
| ACTTACAATGCCCTTATTCG+CGG | + | chr4.3:23948356-23948375 | MS.gene052496:CDS | 40.0% | |
| AGCATTTGATTACCAACCTG+TGG | - | chr4.3:23950203-23950222 | None:intergenic | 40.0% | |
| AGCCTTCTCTGCCTTAATTA+TGG | + | chr4.3:23950616-23950635 | MS.gene052496:intron | 40.0% | |
| AGGTAAGACAGAAGATGCTT+TGG | + | chr4.3:23947971-23947990 | MS.gene052496:CDS | 40.0% | |
| AGTGGAAACCTGATAACAGA+TGG | - | chr4.3:23949087-23949106 | None:intergenic | 40.0% | |
| AGTTACATGCACAGCTGTAA+TGG | + | chr4.3:23947200-23947219 | MS.gene052496:CDS | 40.0% | |
| AGTTGATTGAGAATAGCTGG+AGG | + | chr4.3:23946680-23946699 | MS.gene052496:CDS | 40.0% | |
| ATAGAATTGATGCACTCCAC+AGG | + | chr4.3:23950184-23950203 | MS.gene052496:intron | 40.0% | |
| ATCTGGTTGCAATACATTCG+TGG | + | chr4.3:23950041-23950060 | MS.gene052496:intron | 40.0% | |
| ATGATGACAGACCATGTTTC+TGG | + | chr4.3:23950065-23950084 | MS.gene052496:intron | 40.0% | |
| ATGTCATAAGTAGCGGCATT+TGG | - | chr4.3:23948557-23948576 | None:intergenic | 40.0% | |
| ATTGTAAGCTAGTGGAGGTT+GGG | - | chr4.3:23949870-23949889 | None:intergenic | 40.0% | |
| ATTTGGGGATTCTGTCAGAA+AGG | + | chr4.3:23946427-23946446 | MS.gene052496:intron | 40.0% | |
| CACCATAATTAAGGCAGAGA+AGG | - | chr4.3:23950621-23950640 | None:intergenic | 40.0% | |
| CATTTGAGGGGCAGAAAAAA+AGG | + | chr4.3:23950318-23950337 | MS.gene052496:intron | 40.0% | |
| CTCAGTCTTAAACACTCATC+AGG | + | chr4.3:23949593-23949612 | MS.gene052496:intron | 40.0% | |
| CTCTTTCATTTCCTGGACAA+TGG | - | chr4.3:23947790-23947809 | None:intergenic | 40.0% | |
| CTGATAGAAATGGGGAGAAA+AGG | + | chr4.3:23948875-23948894 | MS.gene052496:intron | 40.0% | |
| GAACTACAAGTAACCACATC+CGG | - | chr4.3:23946985-23947004 | None:intergenic | 40.0% | |
| GACGAATTATAACGTCCCAT+GGG | - | chr4.3:23950103-23950122 | None:intergenic | 40.0% | |
| GATGACTAGAAAGGCAAAAG+TGG | + | chr4.3:23948289-23948308 | MS.gene052496:CDS | 40.0% | |
| GCAAAAAAGCTGAGGTTAGA+AGG | + | chr4.3:23948909-23948928 | MS.gene052496:intron | 40.0% | |
| GCTGCGTACTGTAAATTTGT+TGG | + | chr4.3:23946907-23946926 | MS.gene052496:CDS | 40.0% | |
| GCTTTGATAGACACACCATT+AGG | + | chr4.3:23949300-23949319 | MS.gene052496:intron | 40.0% | |
| GGGTTATTGCAGAATTGGAT+TGG | + | chr4.3:23946537-23946556 | MS.gene052496:CDS | 40.0% | |
| GGTATTCCAGAAAGGTAAAG+TGG | - | chr4.3:23946200-23946219 | None:intergenic | 40.0% | |
| GGTTATCAGGTTTCCACTAT+CGG | + | chr4.3:23949323-23949342 | MS.gene052496:intron | 40.0% | |
| GTAAAGGGACTGGATTAACA+TGG | + | chr4.3:23950772-23950791 | MS.gene052496:CDS | 40.0% | |
| GTAGCATACGAGACATGATT+AGG | - | chr4.3:23947090-23947109 | None:intergenic | 40.0% | |
| GTGTGTTAAGAATCCCACAT+TGG | + | chr4.3:23949165-23949184 | MS.gene052496:intron | 40.0% | |
| GTGTGTTAAGAGTCTCACAT+TGG | + | chr4.3:23949399-23949418 | MS.gene052496:intron | 40.0% | |
| GTTAAGAATCCCACATTGGA+TGG | + | chr4.3:23949169-23949188 | MS.gene052496:intron | 40.0% | |
| GTTAAGAGTCTCACATTGGA+TGG | + | chr4.3:23949403-23949422 | MS.gene052496:intron | 40.0% | |
| GTTAGTGAGATGAAGGAAAG+AGG | + | chr4.3:23948524-23948543 | MS.gene052496:CDS | 40.0% | |
| GTTATCAGGTTTCCACTATC+AGG | + | chr4.3:23949090-23949109 | MS.gene052496:intron | 40.0% | |
| GTTATCAGGTTTCCACTATC+GGG | + | chr4.3:23949090-23949109 | MS.gene052496:intron | 40.0% | |
| TAAAACGGGTGATCTTACGA+GGG | + | chr4.3:23946756-23946775 | MS.gene052496:CDS | 40.0% | |
| TAAACGGTCGTACGAAATTG+AGG | + | chr4.3:23948841-23948860 | MS.gene052496:CDS | 40.0% | |
| TACCTGAGAAACTAAACCAG+AGG | - | chr4.3:23946242-23946261 | None:intergenic | 40.0% | |
| TATAGACCAAACTGCTGATG+AGG | + | chr4.3:23949619-23949638 | MS.gene052496:intron | 40.0% | |
| TCAAAGCCAAATGGTTGTTC+GGG | + | chr4.3:23947161-23947180 | MS.gene052496:CDS | 40.0% | |
| TCTAAACAAAACTGCTGCCT+CGG | - | chr4.3:23947043-23947062 | None:intergenic | 40.0% | |
| TGAAGTGGGAACAAAACCTT+TGG | - | chr4.3:23948648-23948667 | None:intergenic | 40.0% | |
| TGAATGAGATGAAGAGCTAC+GGG | + | chr4.3:23948000-23948019 | MS.gene052496:CDS | 40.0% | |
| TGATAATTTGAGCCATCCAC+AGG | - | chr4.3:23948795-23948814 | None:intergenic | 40.0% | |
| TGATGACAGACCATGTTTCT+GGG | + | chr4.3:23950066-23950085 | MS.gene052496:intron | 40.0% | |
| TGCATCAATTCTATCCTCGA+AGG | - | chr4.3:23950178-23950197 | None:intergenic | 40.0% | |
| TGCCGCTACTTATGACATAT+TGG | + | chr4.3:23948559-23948578 | MS.gene052496:CDS | 40.0% | |
| TGGGGATTTATTGTTCCCAT+GGG | + | chr4.3:23950085-23950104 | MS.gene052496:intron | 40.0% | |
| TGTACAGTAACCGCGAATAA+GGG | - | chr4.3:23948369-23948388 | None:intergenic | 40.0% | |
| TGTCATAAGTAGCGGCATTT+GGG | - | chr4.3:23948556-23948575 | None:intergenic | 40.0% | |
| TTAAGTGAGCGGTTTATCTC+TGG | - | chr4.3:23948824-23948843 | None:intergenic | 40.0% | |
| TTAGGAGGTCTTTCAAATGC+TGG | + | chr4.3:23948476-23948495 | MS.gene052496:CDS | 40.0% | |
| TTGTTCACCTGCCCTAAAAT+AGG | - | chr4.3:23947544-23947563 | None:intergenic | 40.0% | |
| TTGTTCCCACTTTACCTTTC+TGG | + | chr4.3:23946191-23946210 | MS.gene052496:CDS | 40.0% | |
| TTTGGGGATTCTGTCAGAAA+GGG | + | chr4.3:23946428-23946447 | MS.gene052496:intron | 40.0% | |
| ! | AGTTGATGTGTTTAGGGAGA+TGG | + | chr4.3:23947467-23947486 | MS.gene052496:CDS | 40.0% |
| ! | ATCACTGTGTTTTGCAGGTT+AGG | + | chr4.3:23948266-23948285 | MS.gene052496:CDS | 40.0% |
| ! | ATCTGGAGCGTGGATATAAA+AGG | - | chr4.3:23949357-23949376 | None:intergenic | 40.0% |
| ! | ATTGATGGGTATTGTGAAGC+TGG | + | chr4.3:23946637-23946656 | MS.gene052496:CDS | 40.0% |
| ! | ATTTGGAGCGTGGATATAAG+AGG | - | chr4.3:23949123-23949142 | None:intergenic | 40.0% |
| ! | CACTAATCACTGTGTTTTGC+AGG | + | chr4.3:23948261-23948280 | MS.gene052496:CDS | 40.0% |
| ! | CATGTGAGAGAAAGTATGAG+AGG | - | chr4.3:23946158-23946177 | None:intergenic | 40.0% |
| ! | CTTGATGGGTATTGCAAGTT+AGG | + | chr4.3:23947324-23947343 | MS.gene052496:CDS | 40.0% |
| ! | GATTGGTTCAATATGCTGAG+TGG | + | chr4.3:23946554-23946573 | MS.gene052496:CDS | 40.0% |
| ! | TCACTGTGTTTTGCAGGTTA+GGG | + | chr4.3:23948267-23948286 | MS.gene052496:CDS | 40.0% |
| ! | TTGATGGGTATTGTGAAGCT+GGG | + | chr4.3:23946638-23946657 | MS.gene052496:CDS | 40.0% |
| !! | AAATGCTGGTTTGATGGAAG+AGG | + | chr4.3:23948490-23948509 | MS.gene052496:CDS | 40.0% |
| !! | ATGTACAACTTGGTTGATGG+TGG | + | chr4.3:23946580-23946599 | MS.gene052496:CDS | 40.0% |
| !! | GACATATTGGTTTCTGGCTA+TGG | + | chr4.3:23948572-23948591 | MS.gene052496:CDS | 40.0% |
| !! | GGTGATTTGGATTTGGCTTT+AGG | + | chr4.3:23946349-23946368 | MS.gene052496:intron | 40.0% |
| !! | TGAGTGGGTTATGTACAACT+TGG | + | chr4.3:23946570-23946589 | MS.gene052496:CDS | 40.0% |
| !! | TGTACAACTTGGTTGATGGT+GGG | + | chr4.3:23946581-23946600 | MS.gene052496:CDS | 40.0% |
| !!! | ACCTCACAAGTCGGTTTTTT+GGG | + | chr4.3:23949467-23949486 | MS.gene052496:intron | 40.0% |
| !!! | ATTGATGCCTATTTTAGGGC+AGG | + | chr4.3:23947534-23947553 | MS.gene052496:CDS | 40.0% |
| !!! | TCTGATATGCACCGATTTTC+AGG | + | chr4.3:23949662-23949681 | MS.gene052496:CDS | 40.0% |
| AAATGCCCCGAACAACCATT+TGG | - | chr4.3:23947170-23947189 | None:intergenic | 45.0% | |
| AAGTTGGGCCATCTGTTATC+AGG | + | chr4.3:23949076-23949095 | MS.gene052496:intron | 45.0% | |
| AATGGAATCGCGTAGATTGG+AGG | + | chr4.3:23947590-23947609 | MS.gene052496:CDS | 45.0% | |
| AATGGCGTACTTGTGTCCAA+TGG | + | chr4.3:23950564-23950583 | MS.gene052496:intron | 45.0% | |
| AATTGATGCACTCCACAGGT+TGG | + | chr4.3:23950188-23950207 | MS.gene052496:intron | 45.0% | |
| ACACACCATTAGGGGTTATC+AGG | + | chr4.3:23949310-23949329 | MS.gene052496:intron | 45.0% | |
| ACAGATGGCCCAACTTATCT+TGG | - | chr4.3:23949072-23949091 | None:intergenic | 45.0% | |
| ACGACATTCTAACCTGTGGA+TGG | + | chr4.3:23948780-23948799 | MS.gene052496:CDS | 45.0% | |
| ACGTATTCGGCATTGCTTGA+TGG | + | chr4.3:23947309-23947328 | MS.gene052496:CDS | 45.0% | |
| ACTCACTGTTCAAATCAGGG+AGG | + | chr4.3:23947118-23947137 | MS.gene052496:CDS | 45.0% | |
| AGCCTCCTCCAAGATAAGTT+GGG | + | chr4.3:23949061-23949080 | MS.gene052496:intron | 45.0% | |
| AGCTGAGGTTAGAAGGTTGA+AGG | + | chr4.3:23948916-23948935 | MS.gene052496:intron | 45.0% | |
| ATGGCCAGGTCTATGGTAAA+GGG | + | chr4.3:23950757-23950776 | MS.gene052496:CDS | 45.0% | |
| ATGGCGTACTTGTGTCCAAT+GGG | + | chr4.3:23950565-23950584 | MS.gene052496:intron | 45.0% | |
| ATGGGATGTGGCTAAAATGC+AGG | + | chr4.3:23950791-23950810 | MS.gene052496:CDS | 45.0% | |
| CAAAGCCAAATGGTTGTTCG+GGG | + | chr4.3:23947162-23947181 | MS.gene052496:CDS | 45.0% | |
| CAGGTTAGGGATGACTAGAA+AGG | + | chr4.3:23948280-23948299 | MS.gene052496:CDS | 45.0% | |
| CATTGTAAGCTAGTGGAGGT+TGG | - | chr4.3:23949871-23949890 | None:intergenic | 45.0% | |
| CCATCTTAGAAATCGTGGTC+GGG | - | chr4.3:23949035-23949054 | None:intergenic | 45.0% | |
| CCCAAACTGTGTCACGTATT+CGG | + | chr4.3:23947296-23947315 | MS.gene052496:CDS | 45.0% | |
| CCGAATACGTGACACAGTTT+GGG | - | chr4.3:23947299-23947318 | None:intergenic | 45.0% | |
| CGAATACGTGACACAGTTTG+GGG | - | chr4.3:23947298-23947317 | None:intergenic | 45.0% | |
| CGTATTCGGCATTGCTTGAT+GGG | + | chr4.3:23947310-23947329 | MS.gene052496:CDS | 45.0% | |
| CTCACTGTTCAAATCAGGGA+GGG | + | chr4.3:23947119-23947138 | MS.gene052496:CDS | 45.0% | |
| CTCTACAGAATGCCACTGTT+CGG | + | chr4.3:23950007-23950026 | MS.gene052496:intron | 45.0% | |
| CTGAAACCTCATCAGCAGTT+TGG | - | chr4.3:23949628-23949647 | None:intergenic | 45.0% | |
| CTGGGGATTTATTGTTCCCA+TGG | + | chr4.3:23950084-23950103 | MS.gene052496:intron | 45.0% | |
| CTGTACAGTAACCGCGAATA+AGG | - | chr4.3:23948370-23948389 | None:intergenic | 45.0% | |
| CTTATTCGCGGTTACTGTAC+AGG | + | chr4.3:23948368-23948387 | MS.gene052496:CDS | 45.0% | |
| CTTGAAAAGAGTTGGGAGGA+TGG | + | chr4.3:23947647-23947666 | MS.gene052496:CDS | 45.0% | |
| CTTTATGGATTCTGCAGGCA+TGG | + | chr4.3:23947009-23947028 | MS.gene052496:CDS | 45.0% | |
| CTTTGATTAAGGGGCTCTTG+AGG | + | chr4.3:23947844-23947863 | MS.gene052496:CDS | 45.0% | |
| GAAATCTGGGCTCAGGTATA+GGG | + | chr4.3:23950528-23950547 | MS.gene052496:intron | 45.0% | |
| GACTGGATTAACATGGGATG+TGG | + | chr4.3:23950779-23950798 | MS.gene052496:CDS | 45.0% | |
| GGAAACCTGATAACCCCTAA+TGG | - | chr4.3:23949318-23949337 | None:intergenic | 45.0% | |
| GGAAATGGAATCGCGTAGAT+TGG | + | chr4.3:23947587-23947606 | MS.gene052496:CDS | 45.0% | |
| GGACGAATTATAACGTCCCA+TGG | - | chr4.3:23950104-23950123 | None:intergenic | 45.0% | |
| GGAGCGTGGATATAAAAGGT+GGG | - | chr4.3:23949353-23949372 | None:intergenic | 45.0% | |
| GGTGAACAAGATGTTGCTGA+TGG | + | chr4.3:23947555-23947574 | MS.gene052496:CDS | 45.0% | |
| GTAAAACGGGTGATCTTACG+AGG | + | chr4.3:23946755-23946774 | MS.gene052496:CDS | 45.0% | |
| GTCTCACATTGGATGGGAAA+TGG | + | chr4.3:23949410-23949429 | MS.gene052496:intron | 45.0% | |
| GTTCAAATCAGGGAGGGTTA+TGG | + | chr4.3:23947125-23947144 | MS.gene052496:CDS | 45.0% | |
| GTTCGGGGAAGAATTACATC+TGG | + | chr4.3:23950024-23950043 | MS.gene052496:intron | 45.0% | |
| GTTGTGTATGTGACAAGCGT+AGG | - | chr4.3:23946880-23946899 | None:intergenic | 45.0% | |
| TACGGTGCATTGTAAGCTAG+TGG | - | chr4.3:23949878-23949897 | None:intergenic | 45.0% | |
| TCTACAGAATGCCACTGTTC+GGG | + | chr4.3:23950008-23950027 | MS.gene052496:intron | 45.0% | |
| TGAAATCTGGGCTCAGGTAT+AGG | + | chr4.3:23950527-23950546 | MS.gene052496:intron | 45.0% | |
| TGGAGCGTGGATATAAAAGG+TGG | - | chr4.3:23949354-23949373 | None:intergenic | 45.0% | |
| TGGGAAAACTAAAGAGGCTG+AGG | + | chr4.3:23947239-23947258 | MS.gene052496:CDS | 45.0% | |
| TGTAATTCTTCCCCGAACAG+TGG | - | chr4.3:23950022-23950041 | None:intergenic | 45.0% | |
| TGTTTAGGGAGATGGTCCAA+AGG | + | chr4.3:23947475-23947494 | MS.gene052496:CDS | 45.0% | |
| TTACTGTACAGGAAGTCACG+TGG | + | chr4.3:23948379-23948398 | MS.gene052496:CDS | 45.0% | |
| TTCCTGGACAATGGAAAGAG+CGG | - | chr4.3:23947781-23947800 | None:intergenic | 45.0% | |
| ! | ACATGCACAGCTGTAATGGA+TGG | + | chr4.3:23947204-23947223 | MS.gene052496:CDS | 45.0% |
| ! | CGGAGTTGATTGAGAATAGC+TGG | + | chr4.3:23946677-23946696 | MS.gene052496:CDS | 45.0% |
| ! | CTCTTGCAGGTTGAGATAGA+TGG | + | chr4.3:23950738-23950757 | MS.gene052496:intron | 45.0% |
| ! | GATGACAGACCATGTTTCTG+GGG | + | chr4.3:23950067-23950086 | MS.gene052496:intron | 45.0% |
| ! | GTGAGAGAAAGTATGAGAGG+CGG | - | chr4.3:23946155-23946174 | None:intergenic | 45.0% |
| ! | TGCCTCTGGTTTAGTTTCTC+AGG | + | chr4.3:23946237-23946256 | MS.gene052496:CDS | 45.0% |
| !! | AAAAACCGACTTGTGAGGTG+AGG | - | chr4.3:23949466-23949485 | None:intergenic | 45.0% |
| !! | ACCTCACAAGTCGGTTTTGT+GGG | + | chr4.3:23949233-23949252 | MS.gene052496:intron | 45.0% |
| !! | ATTGGCGGGCTTTGTAAAAC+TGG | + | chr4.3:23948056-23948075 | MS.gene052496:CDS | 45.0% |
| !! | CAGAAAGGGTTGGTTGATCA+GGG | + | chr4.3:23946442-23946461 | MS.gene052496:intron | 45.0% |
| !! | GTACAACTTGGTTGATGGTG+GGG | + | chr4.3:23946582-23946601 | MS.gene052496:CDS | 45.0% |
| !! | TCAGAAAGGGTTGGTTGATC+AGG | + | chr4.3:23946441-23946460 | MS.gene052496:intron | 45.0% |
| !! | TGGGTTGATGAGTCAAGCAA+CGG | + | chr4.3:23946657-23946676 | MS.gene052496:CDS | 45.0% |
| !!! | CACCTCACAAGTCGGTTTTT+TGG | + | chr4.3:23949466-23949485 | MS.gene052496:intron | 45.0% |
| !!! | CCTCACAAGTCGGTTTTTTG+GGG | + | chr4.3:23949468-23949487 | MS.gene052496:intron | 45.0% |
| AAACACAATGCGCTCCTTCG+AGG | + | chr4.3:23950161-23950180 | MS.gene052496:intron | 50.0% | |
| ATCCCACATTGGATGGGAGA+TGG | + | chr4.3:23949176-23949195 | MS.gene052496:intron | 50.0% | |
| ATTAAGGGGCTCTTGAGGCT+GGG | + | chr4.3:23947849-23947868 | MS.gene052496:CDS | 50.0% | |
| CAATGGAAAGAGCGGCTAAC+TGG | - | chr4.3:23947773-23947792 | None:intergenic | 50.0% | |
| CAGGCATGGTAAACTAACCG+AGG | + | chr4.3:23947023-23947042 | MS.gene052496:CDS | 50.0% | |
| CAGGTCTATGGTAAAGGGAC+TGG | + | chr4.3:23950762-23950781 | MS.gene052496:CDS | 50.0% | |
| CAGTCCCTTTACCATAGACC+TGG | - | chr4.3:23950764-23950783 | None:intergenic | 50.0% | |
| CGAACAGTGGCATTCTGTAG+AGG | - | chr4.3:23950009-23950028 | None:intergenic | 50.0% | |
| CGTACGACCGTTTAAGTGAG+CGG | - | chr4.3:23948835-23948854 | None:intergenic | 50.0% | |
| CTACAGAATGCCACTGTTCG+GGG | + | chr4.3:23950009-23950028 | MS.gene052496:intron | 50.0% | |
| CTTACACAACCCCACAAGAC+TGG | - | chr4.3:23949011-23949030 | None:intergenic | 50.0% | |
| GAAGGTTGTCCCACATTGGA+TGG | + | chr4.3:23948934-23948953 | MS.gene052496:intron | 50.0% | |
| GAATGGAATCATGCCGGATG+TGG | + | chr4.3:23946969-23946988 | MS.gene052496:CDS | 50.0% | |
| GAGATAGATGGCCAGGTCTA+TGG | + | chr4.3:23950750-23950769 | MS.gene052496:CDS | 50.0% | |
| GAGCCTCCTCCAAGATAAGT+TGG | + | chr4.3:23949060-23949079 | MS.gene052496:intron | 50.0% | |
| GATATCCGGCTCTATACCCT+TGG | - | chr4.3:23947706-23947725 | None:intergenic | 50.0% | |
| GATGGCCAGGTCTATGGTAA+AGG | + | chr4.3:23950756-23950775 | MS.gene052496:CDS | 50.0% | |
| GATGGCCCAACTTATCTTGG+AGG | - | chr4.3:23949069-23949088 | None:intergenic | 50.0% | |
| GCAATCCTCACCTCACAAGT+CGG | + | chr4.3:23949224-23949243 | MS.gene052496:intron | 50.0% | |
| GCCGAATACGTGACACAGTT+TGG | - | chr4.3:23947300-23947319 | None:intergenic | 50.0% | |
| GGAGCGTGGATATAAGAGGT+GGG | - | chr4.3:23949119-23949138 | None:intergenic | 50.0% | |
| GGGATTCTGTCAGAAAGGGT+TGG | + | chr4.3:23946432-23946451 | MS.gene052496:intron | 50.0% | |
| GGGCATCTACCATCCAATGT+GGG | - | chr4.3:23948946-23948965 | None:intergenic | 50.0% | |
| GGTGCATTGTAAGCTAGTGG+AGG | - | chr4.3:23949875-23949894 | None:intergenic | 50.0% | |
| GGTTGAAGGTTGTCCCACAT+TGG | + | chr4.3:23948930-23948949 | MS.gene052496:intron | 50.0% | |
| TACAGGAAGTCACGTGGAGA+AGG | + | chr4.3:23948385-23948404 | MS.gene052496:CDS | 50.0% | |
| TCACGAGAAACTTGTCGCCT+CGG | + | chr4.3:23948208-23948227 | MS.gene052496:CDS | 50.0% | |
| TGGAGCGTGGATATAAGAGG+TGG | - | chr4.3:23949120-23949139 | None:intergenic | 50.0% | |
| TTAAGGCAGAGAAGGCTTCC+AGG | - | chr4.3:23950613-23950632 | None:intergenic | 50.0% | |
| TTGGGAGGATGGATGAAGCT+CGG | + | chr4.3:23947658-23947677 | MS.gene052496:CDS | 50.0% | |
| ! | ACCTCACAAGCCAGTCTTGT+GGG | + | chr4.3:23948998-23949017 | MS.gene052496:intron | 50.0% |
| ! | AGAGAAAGTATGAGAGGCGG+TGG | - | chr4.3:23946152-23946171 | None:intergenic | 50.0% |
| ! | AGGGCATCTACCATCCAATG+TGG | - | chr4.3:23948947-23948966 | None:intergenic | 50.0% |
| ! | CCCGACCACGATTTCTAAGA+TGG | + | chr4.3:23949032-23949051 | MS.gene052496:intron | 50.0% |
| !! | CAAAACCGACTTGTGAGGTG+AGG | - | chr4.3:23949232-23949251 | None:intergenic | 50.0% |
| !! | CACCTCACAAGTCGGTTTTG+TGG | + | chr4.3:23949232-23949251 | MS.gene052496:intron | 50.0% |
| !! | CCCCAAAAAACCGACTTGTG+AGG | - | chr4.3:23949471-23949490 | None:intergenic | 50.0% |
| !! | CCTCACAAGTCGGTTTTGTG+GGG | + | chr4.3:23949234-23949253 | MS.gene052496:intron | 50.0% |
| !! | TGTTAGACGGTTTGGTGTCC+AGG | + | chr4.3:23950391-23950410 | MS.gene052496:intron | 50.0% |
| AAAGGTGGGTGACCCGATAG+TGG | - | chr4.3:23949339-23949358 | None:intergenic | 55.0% | |
| AATGTCCAGTCCTGAGCGTG+AGG | + | chr4.3:23949140-23949159 | MS.gene052496:intron | 55.0% | |
| ACACAGTCAGGCTGAGTTCG+AGG | - | chr4.3:23948235-23948254 | None:intergenic | 55.0% | |
| AGAGGTGGGTGACCTGATAG+TGG | - | chr4.3:23949105-23949124 | None:intergenic | 55.0% | |
| AGCCGCTCTTTCCATTGTCC+AGG | + | chr4.3:23947776-23947795 | MS.gene052496:CDS | 55.0% | |
| AGGCCATCTCCCATCCAATG+TGG | - | chr4.3:23949182-23949201 | None:intergenic | 55.0% | |
| ATGTCCAGTCCTGAGCGTGA+GGG | + | chr4.3:23949141-23949160 | MS.gene052496:intron | 55.0% | |
| CACCTCACAAGCCAGTCTTG+TGG | + | chr4.3:23948997-23949016 | MS.gene052496:intron | 55.0% | |
| CACGAGAAACTTGTCGCCTC+GGG | + | chr4.3:23948209-23948228 | MS.gene052496:CDS | 55.0% | |
| CACGCTCAGGACTGGACATT+TGG | - | chr4.3:23949140-23949159 | None:intergenic | 55.0% | |
| GATTAAGGGGCTCTTGAGGC+TGG | + | chr4.3:23947848-23947867 | MS.gene052496:CDS | 55.0% | |
| GGCCATCTCCCATCCAATGT+GGG | - | chr4.3:23949181-23949200 | None:intergenic | 55.0% | |
| GGCCCAACTTATCTTGGAGG+AGG | - | chr4.3:23949066-23949085 | None:intergenic | 55.0% | |
| TTAAGGGGCTCTTGAGGCTG+GGG | + | chr4.3:23947850-23947869 | MS.gene052496:CDS | 55.0% | |
| ! | AGGACTGGACATTTGGAGCG+TGG | - | chr4.3:23949133-23949152 | None:intergenic | 55.0% |
| ! | CCTCACAAGCCAGTCTTGTG+GGG | + | chr4.3:23948999-23949018 | MS.gene052496:intron | 55.0% |
| ! | GCACTCCAAGGGTATAGAGC+CGG | + | chr4.3:23947698-23947717 | MS.gene052496:CDS | 55.0% |
| ! | GCAGGTTGAGATAGATGGCC+AGG | + | chr4.3:23950743-23950762 | MS.gene052496:intron | 55.0% |
| !! | CAAGACTGGCTTGTGAGGTG+AGG | - | chr4.3:23948997-23949016 | None:intergenic | 55.0% |
| !! | CCCCACAAAACCGACTTGTG+AGG | - | chr4.3:23949237-23949256 | None:intergenic | 55.0% |
| CACGCTCAGGACTGGACATC+TGG | - | chr4.3:23949374-23949393 | None:intergenic | 60.0% | |
| GATGTCCAGTCCTGAGCGTG+AGG | + | chr4.3:23949374-23949393 | MS.gene052496:intron | 60.0% | |
| GGAAGTTGTAGGGTGAGCGC+TGG | + | chr4.3:23950482-23950501 | MS.gene052496:intron | 60.0% | |
| TAACACACCCCCTCACGCTC+AGG | - | chr4.3:23949153-23949172 | None:intergenic | 60.0% | |
| TGTCCAGTCCTGAGCGTGAG+GGG | + | chr4.3:23949142-23949161 | MS.gene052496:intron | 60.0% | |
| ! | AGGACTGGACATCTGGAGCG+TGG | - | chr4.3:23949367-23949386 | None:intergenic | 60.0% |
| !! | CCCCACAAGACTGGCTTGTG+AGG | - | chr4.3:23949002-23949021 | None:intergenic | 60.0% |
| !! | GTTGTAGGGTGAGCGCTGGA+TGG | + | chr4.3:23950486-23950505 | MS.gene052496:intron | 60.0% |
| GTCCAGTCCTGAGCGTGAGG+GGG | + | chr4.3:23949143-23949162 | MS.gene052496:intron | 65.0% | |
| CACCCCCTCACGCTCAGGAC+TGG | - | chr4.3:23949148-23949167 | None:intergenic | 70.0% | |
| CAGGCTGAGTTCGAGGCCCG+AGG | - | chr4.3:23948228-23948247 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 23946144 | 23950830 | 23946144 | ID=MS.gene052496 |
| chr4.3 | mRNA | 23946144 | 23950830 | 23946144 | ID=MS.gene052496.t1;Parent=MS.gene052496 |
| chr4.3 | exon | 23946144 | 23946258 | 23946144 | ID=MS.gene052496.t1.exon1;Parent=MS.gene052496.t1 |
| chr4.3 | CDS | 23946144 | 23946258 | 23946144 | ID=cds.MS.gene052496.t1;Parent=MS.gene052496.t1 |
| chr4.3 | exon | 23946445 | 23946496 | 23946445 | ID=MS.gene052496.t1.exon2;Parent=MS.gene052496.t1 |
| chr4.3 | CDS | 23946445 | 23946496 | 23946445 | ID=cds.MS.gene052496.t1;Parent=MS.gene052496.t1 |
| chr4.3 | exon | 23946533 | 23948862 | 23946533 | ID=MS.gene052496.t1.exon3;Parent=MS.gene052496.t1 |
| chr4.3 | CDS | 23946533 | 23948862 | 23946533 | ID=cds.MS.gene052496.t1;Parent=MS.gene052496.t1 |
| chr4.3 | exon | 23949624 | 23949683 | 23949624 | ID=MS.gene052496.t1.exon4;Parent=MS.gene052496.t1 |
| chr4.3 | CDS | 23949624 | 23949683 | 23949624 | ID=cds.MS.gene052496.t1;Parent=MS.gene052496.t1 |
| chr4.3 | exon | 23950747 | 23950830 | 23950747 | ID=MS.gene052496.t1.exon5;Parent=MS.gene052496.t1 |
| chr4.3 | CDS | 23950747 | 23950830 | 23950747 | ID=cds.MS.gene052496.t1;Parent=MS.gene052496.t1 |
| Gene Sequence |
| Protein sequence |
