Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70331.t1 | RHN42986.1 | 94.1 | 203 | 5 | 1 | 1 | 196 | 1 | 203 | 2.90E-101 | 377.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70331.t1 | O23310 | 85.6 | 104 | 15 | 0 | 23 | 126 | 16 | 119 | 2.5e-45 | 183.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70331.t1 | A0A396GPD3 | 94.1 | 203 | 5 | 1 | 1 | 196 | 1 | 203 | 2.1e-101 | 377.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene70331.t1 | TF | NF-YB |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene70331 | 0.804852 | 1.77E-49 | -1.69E-46 |
MS.gene049159 | MS.gene70331 | 0.803682 | 3.10E-49 | -1.69E-46 |
MS.gene049382 | MS.gene70331 | 0.807076 | 6.03E-50 | -1.69E-46 |
MS.gene049585 | MS.gene70331 | 0.823619 | 1.26E-53 | -1.69E-46 |
MS.gene04984 | MS.gene70331 | 0.800093 | 1.69E-48 | -1.69E-46 |
MS.gene049887 | MS.gene70331 | 0.802594 | 5.21E-49 | -1.69E-46 |
MS.gene050629 | MS.gene70331 | -0.818261 | 2.15E-52 | -1.69E-46 |
MS.gene050762 | MS.gene70331 | 0.842684 | 2.22E-58 | -1.69E-46 |
MS.gene050763 | MS.gene70331 | 0.843922 | 1.04E-58 | -1.69E-46 |
MS.gene050807 | MS.gene70331 | 0.824434 | 8.09E-54 | -1.69E-46 |
MS.gene050826 | MS.gene70331 | 0.806244 | 9.04E-50 | -1.69E-46 |
MS.gene051102 | MS.gene70331 | 0.836641 | 8.31E-57 | -1.69E-46 |
MS.gene051180 | MS.gene70331 | 0.807905 | 4.02E-50 | -1.69E-46 |
MS.gene051757 | MS.gene70331 | 0.816754 | 4.70E-52 | -1.69E-46 |
MS.gene052307 | MS.gene70331 | 0.800328 | 1.52E-48 | -1.69E-46 |
MS.gene052397 | MS.gene70331 | 0.807112 | 5.93E-50 | -1.69E-46 |
MS.gene052496 | MS.gene70331 | 0.80615 | 9.46E-50 | -1.69E-46 |
MS.gene052609 | MS.gene70331 | 0.807125 | 5.89E-50 | -1.69E-46 |
MS.gene052665 | MS.gene70331 | 0.828658 | 7.95E-55 | -1.69E-46 |
MS.gene052856 | MS.gene70331 | 0.809721 | 1.64E-50 | -1.69E-46 |
MS.gene052896 | MS.gene70331 | 0.807182 | 5.73E-50 | -1.69E-46 |
MS.gene054379 | MS.gene70331 | 0.831138 | 1.98E-55 | -1.69E-46 |
MS.gene054472 | MS.gene70331 | 0.803554 | 3.30E-49 | -1.69E-46 |
MS.gene05462 | MS.gene70331 | 0.824889 | 6.32E-54 | -1.69E-46 |
MS.gene055469 | MS.gene70331 | 0.827986 | 1.16E-54 | -1.69E-46 |
MS.gene056432 | MS.gene70331 | 0.810941 | 8.97E-51 | -1.69E-46 |
MS.gene056760 | MS.gene70331 | 0.822974 | 1.78E-53 | -1.69E-46 |
MS.gene057360 | MS.gene70331 | 0.801706 | 7.93E-49 | -1.69E-46 |
MS.gene057869 | MS.gene70331 | 0.808559 | 2.92E-50 | -1.69E-46 |
MS.gene058638 | MS.gene70331 | 0.811255 | 7.67E-51 | -1.69E-46 |
MS.gene058639 | MS.gene70331 | 0.819105 | 1.38E-52 | -1.69E-46 |
MS.gene058758 | MS.gene70331 | 0.81469 | 1.35E-51 | -1.69E-46 |
MS.gene058906 | MS.gene70331 | 0.805501 | 1.29E-49 | -1.69E-46 |
MS.gene059171 | MS.gene70331 | 0.812031 | 5.20E-51 | -1.69E-46 |
MS.gene059713 | MS.gene70331 | 0.994894 | 3.84E-211 | -1.69E-46 |
MS.gene059719 | MS.gene70331 | 0.801855 | 7.40E-49 | -1.69E-46 |
MS.gene059725 | MS.gene70331 | 0.808051 | 3.75E-50 | -1.69E-46 |
MS.gene060380 | MS.gene70331 | 0.802371 | 5.79E-49 | -1.69E-46 |
MS.gene060637 | MS.gene70331 | 0.822262 | 2.60E-53 | -1.69E-46 |
MS.gene060998 | MS.gene70331 | 0.821251 | 4.46E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70331.t1 | MTR_8g091720 | 93.717 | 191 | 5 | 1 | 1 | 184 | 1 | 191 | 9.77e-131 | 365 |
MS.gene70331.t1 | MTR_5g095740 | 79.487 | 117 | 22 | 1 | 13 | 129 | 10 | 124 | 8.07e-63 | 192 |
MS.gene70331.t1 | MTR_2g026710 | 80.702 | 114 | 20 | 1 | 24 | 137 | 13 | 124 | 2.57e-62 | 191 |
MS.gene70331.t1 | MTR_3g058980 | 87.879 | 99 | 12 | 0 | 25 | 123 | 24 | 122 | 4.04e-60 | 186 |
MS.gene70331.t1 | MTR_7g061270 | 75.439 | 114 | 28 | 0 | 13 | 126 | 11 | 124 | 1.31e-59 | 184 |
MS.gene70331.t1 | MTR_7g100650 | 75.439 | 114 | 28 | 0 | 13 | 126 | 11 | 124 | 1.34e-59 | 184 |
MS.gene70331.t1 | MTR_8g093920 | 76.636 | 107 | 25 | 0 | 27 | 133 | 39 | 145 | 1.44e-56 | 178 |
MS.gene70331.t1 | MTR_1g072790 | 76.699 | 103 | 24 | 0 | 23 | 125 | 24 | 126 | 2.27e-56 | 176 |
MS.gene70331.t1 | MTR_4g133938 | 74.312 | 109 | 28 | 0 | 17 | 125 | 8 | 116 | 2.17e-53 | 167 |
MS.gene70331.t1 | MTR_1g088860 | 69.307 | 101 | 31 | 0 | 22 | 122 | 30 | 130 | 1.83e-48 | 157 |
MS.gene70331.t1 | MTR_0392s0020 | 64.151 | 106 | 38 | 0 | 21 | 126 | 11 | 116 | 2.69e-48 | 154 |
MS.gene70331.t1 | MTR_4g119500 | 56.557 | 122 | 53 | 0 | 12 | 133 | 6 | 127 | 2.47e-47 | 151 |
MS.gene70331.t1 | MTR_4g133952 | 64.948 | 97 | 34 | 0 | 27 | 123 | 57 | 153 | 4.84e-46 | 152 |
MS.gene70331.t1 | MTR_1g039040 | 62.745 | 102 | 38 | 0 | 27 | 128 | 5 | 106 | 1.38e-44 | 146 |
MS.gene70331.t1 | MTR_1g083070 | 61.957 | 92 | 35 | 0 | 28 | 119 | 4 | 95 | 7.69e-39 | 130 |
MS.gene70331.t1 | MTR_1g029070 | 49.580 | 119 | 54 | 1 | 14 | 126 | 32 | 150 | 2.45e-32 | 115 |
MS.gene70331.t1 | MTR_5g095900 | 44.330 | 97 | 51 | 1 | 24 | 117 | 9 | 105 | 1.50e-21 | 87.4 |
MS.gene70331.t1 | MTR_1g028480 | 53.125 | 64 | 30 | 0 | 58 | 121 | 19 | 82 | 2.13e-18 | 77.0 |
MS.gene70331.t1 | MTR_1g029100 | 40.789 | 76 | 45 | 0 | 33 | 108 | 7 | 82 | 1.91e-17 | 73.9 |
MS.gene70331.t1 | MTR_2g056000 | 32.143 | 84 | 57 | 0 | 22 | 105 | 35 | 118 | 1.20e-13 | 66.6 |
MS.gene70331.t1 | MTR_4g112380 | 33.766 | 77 | 51 | 0 | 29 | 105 | 12 | 88 | 2.63e-13 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70331.t1 | AT4G14540 | 81.818 | 110 | 20 | 0 | 24 | 133 | 17 | 126 | 3.65e-64 | 195 |
MS.gene70331.t1 | AT5G47640 | 85.859 | 99 | 14 | 0 | 25 | 123 | 24 | 122 | 6.47e-60 | 186 |
MS.gene70331.t1 | AT2G13570 | 74.576 | 118 | 29 | 1 | 8 | 125 | 17 | 133 | 1.92e-59 | 185 |
MS.gene70331.t1 | AT3G53340 | 68.800 | 125 | 28 | 2 | 14 | 133 | 21 | 139 | 1.87e-56 | 176 |
MS.gene70331.t1 | AT3G53340 | 68.800 | 125 | 28 | 2 | 14 | 133 | 21 | 139 | 1.87e-56 | 176 |
MS.gene70331.t1 | AT2G37060 | 71.552 | 116 | 28 | 1 | 27 | 137 | 29 | 144 | 4.54e-56 | 175 |
MS.gene70331.t1 | AT2G37060 | 71.552 | 116 | 28 | 1 | 27 | 137 | 29 | 144 | 4.54e-56 | 175 |
MS.gene70331.t1 | AT2G37060 | 71.552 | 116 | 28 | 1 | 27 | 137 | 29 | 144 | 4.54e-56 | 175 |
MS.gene70331.t1 | AT2G38880 | 69.643 | 112 | 34 | 0 | 14 | 125 | 7 | 118 | 7.77e-55 | 171 |
MS.gene70331.t1 | AT3G53340 | 75.238 | 105 | 20 | 1 | 14 | 118 | 21 | 119 | 9.01e-55 | 170 |
MS.gene70331.t1 | AT2G38880 | 69.643 | 112 | 34 | 0 | 14 | 125 | 7 | 118 | 1.20e-54 | 171 |
MS.gene70331.t1 | AT2G38880 | 69.643 | 112 | 34 | 0 | 14 | 125 | 7 | 118 | 1.20e-54 | 171 |
MS.gene70331.t1 | AT2G38880 | 69.643 | 112 | 34 | 0 | 14 | 125 | 7 | 118 | 1.20e-54 | 171 |
MS.gene70331.t1 | AT3G53340 | 75.472 | 106 | 20 | 1 | 14 | 119 | 21 | 120 | 2.67e-54 | 170 |
MS.gene70331.t1 | AT3G53340 | 75.472 | 106 | 20 | 1 | 14 | 119 | 21 | 120 | 2.67e-54 | 170 |
MS.gene70331.t1 | AT2G38880 | 71.429 | 105 | 30 | 0 | 14 | 118 | 7 | 111 | 1.13e-52 | 164 |
MS.gene70331.t1 | AT2G38880 | 67.544 | 114 | 37 | 0 | 14 | 127 | 7 | 120 | 1.39e-52 | 165 |
MS.gene70331.t1 | AT2G38880 | 71.429 | 105 | 30 | 0 | 14 | 118 | 7 | 111 | 3.32e-52 | 165 |
MS.gene70331.t1 | AT2G38880 | 71.429 | 105 | 30 | 0 | 14 | 118 | 7 | 111 | 3.32e-52 | 165 |
MS.gene70331.t1 | AT2G38880 | 77.660 | 94 | 21 | 0 | 25 | 118 | 18 | 111 | 5.34e-52 | 164 |
MS.gene70331.t1 | AT2G38880 | 77.660 | 94 | 21 | 0 | 25 | 118 | 18 | 111 | 5.34e-52 | 164 |
MS.gene70331.t1 | AT2G38880 | 77.660 | 94 | 21 | 0 | 25 | 118 | 18 | 111 | 5.34e-52 | 164 |
MS.gene70331.t1 | AT2G47810 | 71.845 | 103 | 29 | 0 | 22 | 124 | 45 | 147 | 3.72e-51 | 162 |
MS.gene70331.t1 | AT5G47670 | 60.714 | 112 | 44 | 0 | 16 | 127 | 17 | 128 | 6.05e-48 | 155 |
MS.gene70331.t1 | AT5G47670 | 60.714 | 112 | 44 | 0 | 16 | 127 | 46 | 157 | 1.49e-47 | 155 |
MS.gene70331.t1 | AT5G47670 | 60.714 | 112 | 44 | 0 | 16 | 127 | 46 | 157 | 1.49e-47 | 155 |
MS.gene70331.t1 | AT1G21970 | 62.000 | 100 | 38 | 0 | 26 | 125 | 57 | 156 | 2.48e-45 | 150 |
MS.gene70331.t1 | AT1G09030 | 62.500 | 96 | 36 | 0 | 28 | 123 | 3 | 98 | 1.22e-42 | 140 |
MS.gene70331.t1 | AT5G08190 | 35.897 | 78 | 50 | 0 | 28 | 105 | 11 | 88 | 1.70e-14 | 68.2 |
MS.gene70331.t1 | AT5G08190 | 35.897 | 78 | 50 | 0 | 28 | 105 | 11 | 88 | 1.83e-14 | 68.2 |
MS.gene70331.t1 | AT5G23090 | 33.766 | 77 | 51 | 0 | 29 | 105 | 12 | 88 | 4.99e-14 | 67.0 |
MS.gene70331.t1 | AT5G23090 | 33.766 | 77 | 51 | 0 | 29 | 105 | 12 | 88 | 4.99e-14 | 67.0 |
MS.gene70331.t1 | AT5G23090 | 33.766 | 77 | 51 | 0 | 29 | 105 | 12 | 88 | 4.99e-14 | 67.0 |
MS.gene70331.t1 | AT5G23090 | 33.766 | 77 | 51 | 0 | 29 | 105 | 12 | 88 | 4.99e-14 | 67.0 |
Find 42 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAATGGTGATGATCTTCTT+TGG | 0.277181 | 4.1:-9593446 | MS.gene70331:CDS |
TTAATCTCTTGGAACCTCTT+TGG | 0.292077 | 4.1:+9593249 | None:intergenic |
AAGTTTATCTTAATAATTAT+AGG | 0.297968 | 4.1:-9593380 | MS.gene70331:CDS |
GAGTTCATAAGTTTCATTAC+TGG | 0.304041 | 4.1:-9593510 | MS.gene70331:CDS |
TGCCACCAAACCTACGTTAC+AGG | 0.318400 | 4.1:-9593149 | MS.gene70331:CDS |
GAAAAGAGGAAAACAATTAA+TGG | 0.329176 | 4.1:-9593462 | MS.gene70331:CDS |
AGTTTATCTTAATAATTATA+GGG | 0.334719 | 4.1:-9593379 | MS.gene70331:CDS |
ATTGTGGATTATAGAGTAAT+TGG | 0.335947 | 4.1:-9593219 | MS.gene70331:CDS |
AAGAGGTTCCAAGAGATTAA+TGG | 0.350652 | 4.1:-9593246 | MS.gene70331:CDS |
ATTATTAATTTCAACATGTC+CGG | 0.359734 | 4.1:-9593720 | None:intergenic |
TAATGGTGATGATCTTCTTT+GGG | 0.364795 | 4.1:-9593445 | MS.gene70331:CDS |
GACTTCCTACAGGACTTGTT+TGG | 0.366205 | 4.1:+9593685 | None:intergenic |
TGTTTGGTTTCTCTTATTCC+CGG | 0.387356 | 4.1:+9593701 | None:intergenic |
CAATCCCTCCATTAATCTCT+TGG | 0.406112 | 4.1:+9593238 | None:intergenic |
GATGAAACAGAACATGCAAT+TGG | 0.429214 | 4.1:-9593189 | MS.gene70331:CDS |
CCTGATGTTGGACTTCCTAC+AGG | 0.434628 | 4.1:+9593675 | None:intergenic |
ATACGGCTCACGTTGGCAAT+TGG | 0.452960 | 4.1:+9593606 | None:intergenic |
TCTGAGATGTTTCCTGATGT+TGG | 0.453105 | 4.1:+9593663 | None:intergenic |
CTTTGGGCTATGACAACACT+TGG | 0.464387 | 4.1:-9593429 | MS.gene70331:CDS |
AATAATTATAGGGAAATTGA+AGG | 0.468083 | 4.1:-9593369 | MS.gene70331:CDS |
TCAACCCTGTAACGTAGGTT+TGG | 0.472415 | 4.1:+9593144 | None:intergenic |
TCAATTGATGTTAATGATGT+TGG | 0.481755 | 4.1:-9593288 | MS.gene70331:CDS |
CCTGTAGGAAGTCCAACATC+AGG | 0.498605 | 4.1:-9593675 | MS.gene70331:CDS |
ACCTACGTTACAGGGTTGAA+TGG | 0.502904 | 4.1:-9593140 | MS.gene70331:CDS |
TTATTAATTTCAACATGTCC+GGG | 0.509564 | 4.1:-9593719 | None:intergenic |
AGAGATTAATGGAGGGATTG+TGG | 0.513734 | 4.1:-9593235 | MS.gene70331:CDS |
ACAGAACATGCAATTGGAAG+TGG | 0.518322 | 4.1:-9593183 | MS.gene70331:CDS |
CTCAAAAGAAGCAAAGGAAA+CGG | 0.525390 | 4.1:-9593550 | MS.gene70331:CDS |
ATTGATGTTAATGATGTTGG+TGG | 0.525414 | 4.1:-9593285 | MS.gene70331:CDS |
ACCCTGTAACGTAGGTTTGG+TGG | 0.528618 | 4.1:+9593147 | None:intergenic |
GATGTTAATGATGTTGGTGG+TGG | 0.530464 | 4.1:-9593282 | MS.gene70331:CDS |
CATCATCAAAAGAACAAGAC+AGG | 0.530857 | 4.1:-9593635 | MS.gene70331:CDS |
ATAAGTGCCAGAGAGAAAAG+AGG | 0.537335 | 4.1:-9593476 | MS.gene70331:CDS |
TTATTAAGATAAACTTTCAA+AGG | 0.539135 | 4.1:+9593387 | None:intergenic |
GCCACCAAACCTACGTTACA+GGG | 0.557356 | 4.1:-9593148 | MS.gene70331:CDS |
TAAAATCTCAAAAGAAGCAA+AGG | 0.579705 | 4.1:-9593556 | MS.gene70331:CDS |
AGAAACCAAACAAGTCCTGT+AGG | 0.592028 | 4.1:-9593690 | MS.gene70331:CDS |
GGCTCACGTTGGCAATTGGT+AGG | 0.609486 | 4.1:+9593610 | None:intergenic |
ACCATTCAACCCTGTAACGT+AGG | 0.617328 | 4.1:+9593139 | None:intergenic |
AGGTTCCAAGAGATTAATGG+AGG | 0.632716 | 4.1:-9593243 | MS.gene70331:CDS |
GGTTCCAAGAGATTAATGGA+GGG | 0.665223 | 4.1:-9593242 | MS.gene70331:CDS |
TTTCATTATACGGCTCACGT+TGG | 0.672250 | 4.1:+9593599 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTTTATCTTAATAATTAT+AGG | - | chr4.1:9593462-9593481 | MS.gene70331:CDS | 10.0% |
!! | AGTTTATCTTAATAATTATA+GGG | - | chr4.1:9593463-9593482 | MS.gene70331:CDS | 10.0% |
!! | TTATTAAGATAAACTTTCAA+AGG | + | chr4.1:9593458-9593477 | None:intergenic | 15.0% |
!! | AATAATTATAGGGAAATTGA+AGG | - | chr4.1:9593473-9593492 | MS.gene70331:CDS | 20.0% |
! | GAAAAGAGGAAAACAATTAA+TGG | - | chr4.1:9593380-9593399 | MS.gene70331:CDS | 25.0% |
! | TAAAATCTCAAAAGAAGCAA+AGG | - | chr4.1:9593286-9593305 | MS.gene70331:CDS | 25.0% |
! | TCAATTGATGTTAATGATGT+TGG | - | chr4.1:9593554-9593573 | MS.gene70331:CDS | 25.0% |
!! | ATTGTGGATTATAGAGTAAT+TGG | - | chr4.1:9593623-9593642 | MS.gene70331:CDS | 25.0% |
ATTGATGTTAATGATGTTGG+TGG | - | chr4.1:9593557-9593576 | MS.gene70331:CDS | 30.0% | |
GAGTTCATAAGTTTCATTAC+TGG | - | chr4.1:9593332-9593351 | MS.gene70331:CDS | 30.0% | |
! | TAATGGTGATGATCTTCTTT+GGG | - | chr4.1:9593397-9593416 | MS.gene70331:CDS | 30.0% |
! | TTAATGGTGATGATCTTCTT+TGG | - | chr4.1:9593396-9593415 | MS.gene70331:CDS | 30.0% |
!! | GAAGTGCTCTTTTCATTATA+CGG | + | chr4.1:9593256-9593275 | None:intergenic | 30.0% |
!! | TTTGAGATTTTAGCATTTGC+TGG | + | chr4.1:9593278-9593297 | None:intergenic | 30.0% |
!!! | CTTGGTTTTGAAAACTATGT+TGG | - | chr4.1:9593431-9593450 | MS.gene70331:CDS | 30.0% |
AAGAGGTTCCAAGAGATTAA+TGG | - | chr4.1:9593596-9593615 | MS.gene70331:CDS | 35.0% | |
CATCATCAAAAGAACAAGAC+AGG | - | chr4.1:9593207-9593226 | MS.gene70331:CDS | 35.0% | |
CTCAAAAGAAGCAAAGGAAA+CGG | - | chr4.1:9593292-9593311 | MS.gene70331:CDS | 35.0% | |
GATGAAACAGAACATGCAAT+TGG | - | chr4.1:9593653-9593672 | MS.gene70331:CDS | 35.0% | |
TTAATCTCTTGGAACCTCTT+TGG | + | chr4.1:9593596-9593615 | None:intergenic | 35.0% | |
! | TGTTTGGTTTCTCTTATTCC+CGG | + | chr4.1:9593144-9593163 | None:intergenic | 35.0% |
! | TTGTTTTCCTCTTTTCTCTC+TGG | + | chr4.1:9593376-9593395 | None:intergenic | 35.0% |
ACAGAACATGCAATTGGAAG+TGG | - | chr4.1:9593659-9593678 | MS.gene70331:CDS | 40.0% | |
AGAAACCAAACAAGTCCTGT+AGG | - | chr4.1:9593152-9593171 | MS.gene70331:CDS | 40.0% | |
AGAGATTAATGGAGGGATTG+TGG | - | chr4.1:9593607-9593626 | MS.gene70331:CDS | 40.0% | |
AGGTTCCAAGAGATTAATGG+AGG | - | chr4.1:9593599-9593618 | MS.gene70331:CDS | 40.0% | |
ATAAGTGCCAGAGAGAAAAG+AGG | - | chr4.1:9593366-9593385 | MS.gene70331:CDS | 40.0% | |
CAATCCCTCCATTAATCTCT+TGG | + | chr4.1:9593607-9593626 | None:intergenic | 40.0% | |
GGTTCCAAGAGATTAATGGA+GGG | - | chr4.1:9593600-9593619 | MS.gene70331:CDS | 40.0% | |
TTTCATTATACGGCTCACGT+TGG | + | chr4.1:9593246-9593265 | None:intergenic | 40.0% | |
! | GATGTTAATGATGTTGGTGG+TGG | - | chr4.1:9593560-9593579 | MS.gene70331:CDS | 40.0% |
! | GTGGATTTTATGCTCCAAAG+AGG | - | chr4.1:9593579-9593598 | MS.gene70331:CDS | 40.0% |
! | TCTGAGATGTTTCCTGATGT+TGG | + | chr4.1:9593182-9593201 | None:intergenic | 40.0% |
ACCATTCAACCCTGTAACGT+AGG | + | chr4.1:9593706-9593725 | None:intergenic | 45.0% | |
ACCTACGTTACAGGGTTGAA+TGG | - | chr4.1:9593702-9593721 | MS.gene70331:CDS | 45.0% | |
CTTTGGGCTATGACAACACT+TGG | - | chr4.1:9593413-9593432 | MS.gene70331:CDS | 45.0% | |
TCAACCCTGTAACGTAGGTT+TGG | + | chr4.1:9593701-9593720 | None:intergenic | 45.0% | |
! | GACTTCCTACAGGACTTGTT+TGG | + | chr4.1:9593160-9593179 | None:intergenic | 45.0% |
ACCCTGTAACGTAGGTTTGG+TGG | + | chr4.1:9593698-9593717 | None:intergenic | 50.0% | |
ATACGGCTCACGTTGGCAAT+TGG | + | chr4.1:9593239-9593258 | None:intergenic | 50.0% | |
CCTGATGTTGGACTTCCTAC+AGG | + | chr4.1:9593170-9593189 | None:intergenic | 50.0% | |
CCTGTAGGAAGTCCAACATC+AGG | - | chr4.1:9593167-9593186 | MS.gene70331:CDS | 50.0% | |
GCCACCAAACCTACGTTACA+GGG | - | chr4.1:9593694-9593713 | MS.gene70331:CDS | 50.0% | |
TGCCACCAAACCTACGTTAC+AGG | - | chr4.1:9593693-9593712 | MS.gene70331:CDS | 50.0% | |
GGCTCACGTTGGCAATTGGT+AGG | + | chr4.1:9593235-9593254 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 9593137 | 9593727 | 9593137 | ID=MS.gene70331 |
chr4.1 | mRNA | 9593137 | 9593727 | 9593137 | ID=MS.gene70331.t1;Parent=MS.gene70331 |
chr4.1 | exon | 9593137 | 9593727 | 9593137 | ID=MS.gene70331.t1.exon1;Parent=MS.gene70331.t1 |
chr4.1 | CDS | 9593137 | 9593727 | 9593137 | ID=cds.MS.gene70331.t1;Parent=MS.gene70331.t1 |
Gene Sequence |
Protein sequence |