Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27571.t1 | XP_024626924.1 | 91.6 | 883 | 72 | 2 | 1 | 881 | 1 | 883 | 0.00E+00 | 1328.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27571.t1 | A0A1S3E141 | 84.2 | 885 | 121 | 8 | 1 | 881 | 1 | 870 | 0.0e+00 | 1169.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene27571 | 0.807881 | 4.07E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene27571 | 0.81355 | 2.42E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene27571 | 0.801536 | 8.60E-49 | -1.69E-46 |
| MS.gene05016 | MS.gene27571 | 0.816451 | 5.49E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene27571 | 0.834034 | 3.78E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene27571 | 0.824772 | 6.73E-54 | -1.69E-46 |
| MS.gene050228 | MS.gene27571 | 0.830423 | 2.96E-55 | -1.69E-46 |
| MS.gene050438 | MS.gene27571 | 0.816327 | 5.86E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene27571 | 0.82865 | 7.99E-55 | -1.69E-46 |
| MS.gene050586 | MS.gene27571 | 0.803321 | 3.69E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene27571 | 0.809594 | 1.75E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene27571 | 0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene27571 | 0.816607 | 5.07E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene27571 | 0.809736 | 1.63E-50 | -1.69E-46 |
| MS.gene050959 | MS.gene27571 | 0.865087 | 7.61E-65 | -1.69E-46 |
| MS.gene05157 | MS.gene27571 | 0.800077 | 1.71E-48 | -1.69E-46 |
| MS.gene051744 | MS.gene27571 | 0.806523 | 7.89E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene27571 | 0.865272 | 6.66E-65 | -1.69E-46 |
| MS.gene05215 | MS.gene27571 | 0.817202 | 3.73E-52 | -1.69E-46 |
| MS.gene052323 | MS.gene27571 | 0.82232 | 2.52E-53 | -1.69E-46 |
| MS.gene052496 | MS.gene27571 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene052611 | MS.gene27571 | 0.830656 | 2.60E-55 | -1.69E-46 |
| MS.gene052612 | MS.gene27571 | 0.81906 | 1.42E-52 | -1.69E-46 |
| MS.gene052613 | MS.gene27571 | 0.804979 | 1.67E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene27571 | 0.855452 | 6.25E-62 | -1.69E-46 |
| MS.gene052896 | MS.gene27571 | 0.814617 | 1.41E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene27571 | 0.826353 | 2.84E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene27571 | 0.809221 | 2.11E-50 | -1.69E-46 |
| MS.gene053565 | MS.gene27571 | 0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene054467 | MS.gene27571 | 0.817818 | 2.71E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene27571 | 0.811932 | 5.47E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene27571 | 0.807556 | 4.77E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene27571 | 0.809222 | 2.10E-50 | -1.69E-46 |
| MS.gene055357 | MS.gene27571 | 0.825217 | 5.29E-54 | -1.69E-46 |
| MS.gene055358 | MS.gene27571 | 0.833968 | 3.93E-56 | -1.69E-46 |
| MS.gene055363 | MS.gene27571 | 0.8057 | 1.18E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene27571 | 0.819942 | 8.91E-53 | -1.69E-46 |
| MS.gene05604 | MS.gene27571 | 0.814451 | 1.53E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene27571 | 0.810961 | 8.89E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene27571 | 0.803086 | 4.12E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene27571 | 0.823791 | 1.15E-53 | -1.69E-46 |
| MS.gene056643 | MS.gene27571 | 0.825541 | 4.43E-54 | -1.69E-46 |
| MS.gene056952 | MS.gene27571 | 0.80821 | 3.46E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene27571 | 0.809899 | 1.51E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene27571 | 0.838017 | 3.69E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene27571 | 0.832903 | 7.25E-56 | -1.69E-46 |
| MS.gene058168 | MS.gene27571 | 0.823498 | 1.34E-53 | -1.69E-46 |
| MS.gene058636 | MS.gene27571 | 0.817418 | 3.33E-52 | -1.69E-46 |
| MS.gene058829 | MS.gene27571 | 0.83271 | 8.09E-56 | -1.69E-46 |
| MS.gene058982 | MS.gene27571 | 0.822197 | 2.69E-53 | -1.69E-46 |
| MS.gene059725 | MS.gene27571 | 0.834885 | 2.31E-56 | -1.69E-46 |
| MS.gene060470 | MS.gene27571 | 0.80393 | 2.76E-49 | -1.69E-46 |
| MS.gene060568 | MS.gene27571 | 0.804765 | 1.85E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene27571 | 0.802459 | 5.56E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene27571 | 0.825296 | 5.07E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene27571 | 0.80845 | 3.08E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene27571 | 0.802531 | 5.37E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27571.t1 | MTR_7g075140 | 97.000 | 900 | 22 | 4 | 1 | 898 | 1 | 897 | 0.0 | 1765 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27571.t1 | AT2G45460 | 51.052 | 903 | 361 | 18 | 28 | 891 | 40 | 900 | 0.0 | 774 |
| MS.gene27571.t1 | AT2G45460 | 50.941 | 903 | 361 | 19 | 28 | 891 | 40 | 899 | 0.0 | 768 |
| MS.gene27571.t1 | AT2G45460 | 50.273 | 917 | 361 | 19 | 28 | 891 | 40 | 914 | 0.0 | 764 |
| MS.gene27571.t1 | AT2G45460 | 50.164 | 917 | 361 | 20 | 28 | 891 | 40 | 913 | 0.0 | 758 |
Find 167 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTGCTTCTTGTGTATTT+TGG | 0.205635 | 7.2:-30406762 | None:intergenic |
| CAAATGGAACTTACCTTAAC+TGG | 0.254521 | 7.2:+30401078 | MS.gene27571:CDS |
| CAATTCTGATCCTAATGTTT+GGG | 0.264024 | 7.2:+30399752 | MS.gene27571:CDS |
| GAGAAGCAGAACGCTGAAAA+TGG | 0.287480 | 7.2:+30405308 | MS.gene27571:CDS |
| AAGAGGTTGAGAAGCGAAAT+TGG | 0.291868 | 7.2:-30399727 | None:intergenic |
| GGATTCTGCTGCTGCTTGTT+AGG | 0.295457 | 7.2:-30399660 | None:intergenic |
| TTTGAAAGGAGGAGGTTAAA+AGG | 0.298717 | 7.2:+30406015 | MS.gene27571:CDS |
| TCAAATTGTTCTTTCAAATC+AGG | 0.300884 | 7.2:-30407393 | None:intergenic |
| AACAAGGATGGTCCTTTAGA+AGG | 0.306789 | 7.2:+30406964 | MS.gene27571:CDS |
| CAAGATTACTAATGAAAATA+TGG | 0.313658 | 7.2:+30400903 | MS.gene27571:CDS |
| TGTAGGCACTGAACGAGTTC+TGG | 0.317169 | 7.2:+30406897 | MS.gene27571:CDS |
| AACAAGAGATTGAAAGGTTT+GGG | 0.318095 | 7.2:+30402823 | MS.gene27571:CDS |
| ACAATTCTGATCCTAATGTT+TGG | 0.318610 | 7.2:+30399751 | MS.gene27571:CDS |
| AACAAGAAACAAGAAGATTA+AGG | 0.324877 | 7.2:+30405444 | MS.gene27571:CDS |
| AACAGATACAATGCGATCTT+TGG | 0.333848 | 7.2:-30399700 | None:intergenic |
| AAACAAGAGATTGAAAGGTT+TGG | 0.340768 | 7.2:+30402822 | MS.gene27571:CDS |
| TATGAAGATCGATGATGATA+TGG | 0.348596 | 7.2:+30406993 | MS.gene27571:CDS |
| GGAGATTACATACACTTTCA+TGG | 0.358919 | 7.2:-30403075 | None:intergenic |
| CTTCTGAAGTCGCCGCTAGC+TGG | 0.359986 | 7.2:+30407181 | MS.gene27571:CDS |
| TCAAAAGCAGGGTGATTCTA+TGG | 0.360002 | 7.2:+30407572 | MS.gene27571:CDS |
| TGACAATAATTCTGTAGATA+TGG | 0.366035 | 7.2:+30406561 | MS.gene27571:CDS |
| AATAAAAGATTTACAGCAAA+TGG | 0.374198 | 7.2:+30403358 | MS.gene27571:CDS |
| ACAGGAATTGAGAAAGCAAT+TGG | 0.375970 | 7.2:+30402994 | MS.gene27571:intron |
| AAGCACCAAGTCTTTCATTA+AGG | 0.378156 | 7.2:-30403451 | None:intergenic |
| GGAACCTCGGGAAGAGAAAA+AGG | 0.381881 | 7.2:+30406598 | MS.gene27571:CDS |
| ACACCGAGTTAGATCTTTGA+AGG | 0.386029 | 7.2:-30402891 | None:intergenic |
| CGAAAATCATCAAGAGATAT+AGG | 0.386301 | 7.2:-30402865 | None:intergenic |
| GAGAATTGCCGTTGGATCTC+GGG | 0.390703 | 7.2:-30399638 | None:intergenic |
| ATCATTGTTTGCTAAGCAAC+AGG | 0.392288 | 7.2:+30406492 | MS.gene27571:CDS |
| GGTCTTCGGTTCTGATTAGA+TGG | 0.394887 | 7.2:-30407152 | None:intergenic |
| GAATCATTGTTCAGCACAAA+TGG | 0.396216 | 7.2:+30401062 | MS.gene27571:intron |
| TATGGATGAGGATGAGGAAG+AGG | 0.407916 | 7.2:+30407590 | MS.gene27571:CDS |
| CGGCGACTTCAGAAGTTATA+AGG | 0.408177 | 7.2:-30407173 | None:intergenic |
| TTCAGAAGTTATAAGGTCTT+CGG | 0.409411 | 7.2:-30407166 | None:intergenic |
| ACTGAAAGTCCGTCAAATAA+TGG | 0.412095 | 7.2:+30406922 | MS.gene27571:CDS |
| GAAAGTTCACGACAAGGTAT+TGG | 0.412307 | 7.2:-30407063 | None:intergenic |
| GTGAGAACACCCCAAACATT+AGG | 0.412670 | 7.2:-30399762 | None:intergenic |
| GCAGCATCAGAAGGAGTGTT+TGG | 0.414823 | 7.2:-30407315 | None:intergenic |
| GGAGAATTGCCGTTGGATCT+CGG | 0.419586 | 7.2:-30399639 | None:intergenic |
| TAGAGCGCAGTCTGAGGCTC+AGG | 0.427214 | 7.2:+30404911 | MS.gene27571:CDS |
| ACTATTGAGGTTGCAGAAGC+TGG | 0.428721 | 7.2:+30407126 | MS.gene27571:CDS |
| GAAGAGAAAACCCGCGGAAA+CGG | 0.429973 | 7.2:+30399609 | MS.gene27571:CDS |
| AGGAACTAGGAGATGTCAAC+AGG | 0.430784 | 7.2:+30403396 | MS.gene27571:CDS |
| TAACGGAATTCGAATCAATC+TGG | 0.432142 | 7.2:-30400852 | None:intergenic |
| GAGAAAAGAAGAACGAGAAA+AGG | 0.436015 | 7.2:+30404860 | MS.gene27571:CDS |
| TTGGGCATTGGTGCTGCTGA+GGG | 0.437586 | 7.2:+30402841 | MS.gene27571:CDS |
| GGTTCTGATGTTGATGGTGT+TGG | 0.439214 | 7.2:+30406847 | MS.gene27571:CDS |
| TTCCGTTCACCATTATTTGA+CGG | 0.441204 | 7.2:-30406931 | None:intergenic |
| CGGGGTTCCTCCGTTTCCGC+GGG | 0.443153 | 7.2:-30399619 | None:intergenic |
| TTCTGAAGTCGCCGCTAGCT+GGG | 0.447963 | 7.2:+30407182 | MS.gene27571:CDS |
| AGATTGAAAGGTTTGGGCAT+TGG | 0.450330 | 7.2:+30402829 | MS.gene27571:CDS |
| AGAGACAATAATGAAGGTTC+AGG | 0.450952 | 7.2:+30407255 | MS.gene27571:CDS |
| TGTGTTGGTTCTGATGTTGA+TGG | 0.456042 | 7.2:+30406841 | MS.gene27571:CDS |
| CTCTCCTGCTTGCAGTCAAA+AGG | 0.462865 | 7.2:+30404791 | MS.gene27571:intron |
| CAAATCATTGCAGAATATAC+AGG | 0.467927 | 7.2:+30400878 | MS.gene27571:CDS |
| TTTGGGCATTGGTGCTGCTG+AGG | 0.468907 | 7.2:+30402840 | MS.gene27571:CDS |
| GAGAAAGCAATTGGAGAGTC+AGG | 0.469420 | 7.2:+30403003 | MS.gene27571:CDS |
| CAATGCCCGCAAAAGGCATC+AGG | 0.470674 | 7.2:+30399797 | MS.gene27571:CDS |
| TGGTGATATTATATCATTTG+CGG | 0.473414 | 7.2:+30401142 | MS.gene27571:CDS |
| TTGGCTCCTAAAATTGATGC+TGG | 0.476028 | 7.2:-30399681 | None:intergenic |
| TCTGAAAACAAGAGATTGAA+AGG | 0.477784 | 7.2:+30402817 | MS.gene27571:CDS |
| GAAGCTTGATCAAATACCTA+TGG | 0.479075 | 7.2:+30407023 | MS.gene27571:CDS |
| TCTCTAACAATGCCCGCAAA+AGG | 0.481899 | 7.2:+30399790 | MS.gene27571:CDS |
| AATGGTTGATCTCAAACAAA+AGG | 0.488423 | 7.2:+30403376 | MS.gene27571:CDS |
| GGAGGAGGTTAAAAGGTGCC+AGG | 0.490686 | 7.2:+30406022 | MS.gene27571:CDS |
| GATGTACTTGAGTTTCCAAC+TGG | 0.491314 | 7.2:-30405283 | None:intergenic |
| GCAACTCCATTGTCTGCCAC+AGG | 0.492185 | 7.2:-30402258 | None:intergenic |
| CAATATTCTTGAAAGATACA+AGG | 0.502738 | 7.2:+30400938 | MS.gene27571:CDS |
| TTCATAGTGTCCCCTTCTAA+AGG | 0.503376 | 7.2:-30406976 | None:intergenic |
| ACAAGGATGGTCCTTTAGAA+GGG | 0.504190 | 7.2:+30406965 | MS.gene27571:CDS |
| TGATTCTATGGATGAGGATG+AGG | 0.507637 | 7.2:+30407584 | MS.gene27571:CDS |
| TCATGCTTCTCCGTTTCCAT+AGG | 0.512555 | 7.2:-30407039 | None:intergenic |
| CCGAAGCATGAGTCTTTCCC+TGG | 0.515121 | 7.2:-30406040 | None:intergenic |
| AATATCCGATGAAGAAACTC+AGG | 0.517234 | 7.2:+30407527 | MS.gene27571:CDS |
| CAATCAATCAATGGCGATGG+AGG | 0.521706 | 7.2:+30399587 | None:intergenic |
| AGGCAGCTCGTGAAGAAGCA+TGG | 0.523785 | 7.2:+30405938 | MS.gene27571:CDS |
| GACACTTGCTTCGTTGCTCG+AGG | 0.524264 | 7.2:-30406701 | None:intergenic |
| TGTCGAGGAGGATCAAAAGC+AGG | 0.527285 | 7.2:+30407560 | MS.gene27571:CDS |
| TAAGCAACAGGAACAATTGA+AGG | 0.528373 | 7.2:+30406504 | MS.gene27571:CDS |
| GGAGTCGTAGGTGGAACCTC+GGG | 0.528716 | 7.2:+30406586 | MS.gene27571:CDS |
| AGAAGCAATAAATAAGCTAA+AGG | 0.530408 | 7.2:+30404986 | MS.gene27571:CDS |
| CCAGGGAAAGACTCATGCTT+CGG | 0.531031 | 7.2:+30406040 | MS.gene27571:CDS |
| AGTAACAATGCTGCCAAGGC+AGG | 0.531631 | 7.2:+30406634 | MS.gene27571:CDS |
| AATCAAATGAACTTATAAGT+AGG | 0.531840 | 7.2:+30403492 | MS.gene27571:CDS |
| TGATCAAATACCTATGGAAA+CGG | 0.532572 | 7.2:+30407029 | MS.gene27571:CDS |
| TTGCATTGGACGATTGGTAG+AGG | 0.533917 | 7.2:+30400819 | MS.gene27571:CDS |
| CTGAATCAGATGAACCACTA+TGG | 0.535870 | 7.2:-30407443 | None:intergenic |
| TGTTGGCACAACAGCTATGA+TGG | 0.538744 | 7.2:+30406864 | MS.gene27571:CDS |
| GAGAAAACCCGCGGAAACGG+AGG | 0.539376 | 7.2:+30399612 | MS.gene27571:CDS |
| AAAAGCAGAGACAATAATGA+AGG | 0.541321 | 7.2:+30407249 | MS.gene27571:CDS |
| AGAAGTAGTAGATCCTGCCT+TGG | 0.541906 | 7.2:-30406647 | None:intergenic |
| GGAGTTGCTAAACGCAAAGC+AGG | 0.542831 | 7.2:+30402273 | MS.gene27571:CDS |
| TCGGGGTTCCTCCGTTTCCG+CGG | 0.546346 | 7.2:-30399620 | None:intergenic |
| TGAGCATTGCATTGGACGAT+TGG | 0.547667 | 7.2:+30400813 | MS.gene27571:CDS |
| TTTGCGGGCATTGTTAGAGA+TGG | 0.554853 | 7.2:-30399787 | None:intergenic |
| AATAATTCTGTAGATATGGA+TGG | 0.554979 | 7.2:+30406565 | MS.gene27571:CDS |
| TGATAATAAAGTTCGCCAGT+TGG | 0.558041 | 7.2:+30405268 | MS.gene27571:CDS |
| AGCGCAGTCTGAGGCTCAGG+AGG | 0.559183 | 7.2:+30404914 | MS.gene27571:CDS |
| GAACGCTGAAAATGGAATGA+AGG | 0.559703 | 7.2:+30405316 | MS.gene27571:CDS |
| GCAGGGTGATTCTATGGATG+AGG | 0.560143 | 7.2:+30407578 | MS.gene27571:CDS |
| ACTGCTGATGAGCATTGCAT+TGG | 0.560370 | 7.2:+30400805 | MS.gene27571:CDS |
| TCAAATCCTGTGGCAGACAA+TGG | 0.560728 | 7.2:+30402252 | MS.gene27571:CDS |
| CCACAGTAACAATGCTGCCA+AGG | 0.565732 | 7.2:+30406630 | MS.gene27571:CDS |
| CTTGTTAGGAGAATTGCCGT+TGG | 0.566108 | 7.2:-30399646 | None:intergenic |
| TCTGCAATGATTTGCACTAA+CGG | 0.566289 | 7.2:-30400869 | None:intergenic |
| GGCAGCTCGTGAAGAAGCAT+GGG | 0.566802 | 7.2:+30405939 | MS.gene27571:CDS |
| CTGGCAACAGCAGCATCAGA+AGG | 0.569342 | 7.2:-30407324 | None:intergenic |
| TACTGCTCCTTCTTTACATG+AGG | 0.573922 | 7.2:+30407212 | MS.gene27571:CDS |
| GGAGGAACCCCGAGATCCAA+CGG | 0.575822 | 7.2:+30399630 | MS.gene27571:CDS |
| GTCCGTCAAATAATGGTGAA+CGG | 0.575996 | 7.2:+30406929 | MS.gene27571:CDS |
| GAGACAATAATGAAGGTTCA+GGG | 0.577880 | 7.2:+30407256 | MS.gene27571:CDS |
| GCTGCTGTCAAAGTCTGCCA+TGG | 0.578490 | 7.2:+30401122 | MS.gene27571:CDS |
| CCTTGGCAGCATTGTTACTG+TGG | 0.579095 | 7.2:-30406630 | None:intergenic |
| ATCTTTCAAGAATATTGATG+TGG | 0.580701 | 7.2:-30400932 | None:intergenic |
| ATTGAATGATTCAAATATTG+TGG | 0.581409 | 7.2:+30407281 | MS.gene27571:CDS |
| GATCTCAAACAAAAGGAACT+AGG | 0.581520 | 7.2:+30403383 | MS.gene27571:CDS |
| CGAGCACTAAGTGAGATGAT+TGG | 0.582146 | 7.2:+30407360 | MS.gene27571:CDS |
| ACCGTGGTCATGATCAGCAC+TGG | 0.585100 | 7.2:-30406809 | None:intergenic |
| AGAATTGCCGTTGGATCTCG+GGG | 0.588302 | 7.2:-30399637 | None:intergenic |
| AGCAATTCAAAATACACAAG+AGG | 0.590376 | 7.2:+30406777 | MS.gene27571:CDS |
| TGAAACATTGAGATCCAAGC+TGG | 0.591996 | 7.2:+30405124 | MS.gene27571:CDS |
| AATTCTGATCCTAATGTTTG+GGG | 0.595733 | 7.2:+30399753 | MS.gene27571:CDS |
| GAAGATGCTGCTTGTCGAGT+GGG | 0.596450 | 7.2:+30407414 | MS.gene27571:CDS |
| GACTGTGATATAAGAAGTGA+AGG | 0.596672 | 7.2:+30406736 | MS.gene27571:CDS |
| TGGAGTCGTAGGTGGAACCT+CGG | 0.601679 | 7.2:+30406585 | MS.gene27571:CDS |
| TGATTGTATCTCCTCAGTAG+TGG | 0.602227 | 7.2:-30406473 | None:intergenic |
| AGAAAGAGAAATGTGTGTGC+TGG | 0.602876 | 7.2:+30405100 | MS.gene27571:CDS |
| ATCTTCTAGAGTTCTCTGCA+TGG | 0.603568 | 7.2:-30406527 | None:intergenic |
| AGATACTCAAAAGACTATTG+AGG | 0.612733 | 7.2:+30407113 | MS.gene27571:CDS |
| GTAGATATGGATGGAGTCGT+AGG | 0.616681 | 7.2:+30406574 | MS.gene27571:CDS |
| GGCACAACAGCTATGATGGA+AGG | 0.616762 | 7.2:+30406868 | MS.gene27571:CDS |
| TTCATGTTACCATGCTGAGG+AGG | 0.620017 | 7.2:-30401167 | None:intergenic |
| AGTGACACTGGCGATGATGA+TGG | 0.623013 | 7.2:+30407480 | MS.gene27571:CDS |
| CACGGTGTTAGAGATTGTGT+TGG | 0.623995 | 7.2:+30406826 | MS.gene27571:CDS |
| AGTACTGCAAGCCCAGCTAG+CGG | 0.624346 | 7.2:-30407193 | None:intergenic |
| GAGGAGGTTAAAAGGTGCCA+GGG | 0.625120 | 7.2:+30406023 | MS.gene27571:CDS |
| GAAAGAGCTTGAGAGCGAGA+AGG | 0.625683 | 7.2:+30405466 | MS.gene27571:CDS |
| GATATGGATGGAGTCGTAGG+TGG | 0.626616 | 7.2:+30406577 | MS.gene27571:CDS |
| GACACCCTGAGTTTCTTCAT+CGG | 0.628971 | 7.2:-30407532 | None:intergenic |
| AAGCCTTCAAAGATCTAACT+CGG | 0.629170 | 7.2:+30402888 | MS.gene27571:CDS |
| AATCAATCAATCAATGGCGA+TGG | 0.630111 | 7.2:+30399584 | None:intergenic |
| TTTGCGGCTCCTCCTCAGCA+TGG | 0.630396 | 7.2:+30401158 | MS.gene27571:CDS |
| AAATGGAACTTACCTTAACT+GGG | 0.631342 | 7.2:+30401079 | MS.gene27571:CDS |
| ACTGAGAGTTGTAGTGACAC+TGG | 0.633200 | 7.2:+30407468 | MS.gene27571:CDS |
| GTCGAGGAGGATCAAAAGCA+GGG | 0.635450 | 7.2:+30407561 | MS.gene27571:CDS |
| TTAGGATCAGAATTGTGAAG+AGG | 0.635517 | 7.2:-30399744 | None:intergenic |
| AAGTCAGAACCATACCAGCT+TGG | 0.635856 | 7.2:-30405138 | None:intergenic |
| TGTTCATAGAGCGCAGTCTG+AGG | 0.642720 | 7.2:+30404905 | MS.gene27571:CDS |
| GAATTCATGTTACCATGCTG+AGG | 0.645911 | 7.2:-30401170 | None:intergenic |
| CAAGGATGGTCCTTTAGAAG+GGG | 0.646979 | 7.2:+30406966 | MS.gene27571:CDS |
| TCAGGGTGTCGACCATGTCG+AGG | 0.655020 | 7.2:+30407545 | MS.gene27571:CDS |
| TGAAGATGCTGCTTGTCGAG+TGG | 0.656338 | 7.2:+30407413 | MS.gene27571:CDS |
| AAGAACAATTAGATGAAGAG+CGG | 0.659624 | 7.2:+30404832 | MS.gene27571:CDS |
| GAATGATTCAAATATTGTGG+TGG | 0.662662 | 7.2:+30407284 | MS.gene27571:CDS |
| GGTGCATGTTTCAAATCCTG+TGG | 0.667295 | 7.2:+30402242 | MS.gene27571:CDS |
| GAAGACCTTAATGAAAGACT+TGG | 0.670417 | 7.2:+30403446 | MS.gene27571:CDS |
| GGGTGTCGACCATGTCGAGG+AGG | 0.674979 | 7.2:+30407548 | MS.gene27571:CDS |
| ACCAGTGCTGATCATGACCA+CGG | 0.679676 | 7.2:+30406808 | MS.gene27571:CDS |
| ATGATGGAAGGAGATACTGT+AGG | 0.681612 | 7.2:+30406880 | MS.gene27571:CDS |
| CGAGTGGGAGAAGACCATAG+TGG | 0.693111 | 7.2:+30407429 | MS.gene27571:CDS |
| ATGGAGGAAGAGAAAACCCG+CGG | 0.696453 | 7.2:+30399603 | MS.gene27571:CDS |
| AAAGCAATTGGAGAGTCAGG+TGG | 0.698986 | 7.2:+30403006 | MS.gene27571:CDS |
| ATATCCGATGAAGAAACTCA+GGG | 0.704443 | 7.2:+30407528 | MS.gene27571:CDS |
| GGAACTAGGAGATGTCAACA+GGG | 0.715937 | 7.2:+30403397 | MS.gene27571:CDS |
| TGTTGTGAAAGTTCACGACA+AGG | 0.722117 | 7.2:-30407069 | None:intergenic |
| CAAATGATATAATATCACCA+TGG | 0.723685 | 7.2:-30401139 | None:intergenic |
| CAACACAATCTCTAACACCG+TGG | 0.778065 | 7.2:-30406825 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 30399597 | 30407632 | 30399597 | ID=MS.gene27571 |
| chr7.2 | mRNA | 30399597 | 30407632 | 30399597 | ID=MS.gene27571.t1;Parent=MS.gene27571 |
| chr7.2 | exon | 30399597 | 30399818 | 30399597 | ID=MS.gene27571.t1.exon1;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30399597 | 30399818 | 30399597 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30400787 | 30400959 | 30400787 | ID=MS.gene27571.t1.exon2;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30400787 | 30400959 | 30400787 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30401076 | 30401179 | 30401076 | ID=MS.gene27571.t1.exon3;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30401076 | 30401179 | 30401076 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30402214 | 30402294 | 30402214 | ID=MS.gene27571.t1.exon4;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30402214 | 30402294 | 30402214 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30402806 | 30402909 | 30402806 | ID=MS.gene27571.t1.exon5;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30402806 | 30402909 | 30402806 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30402998 | 30403084 | 30402998 | ID=MS.gene27571.t1.exon6;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30402998 | 30403084 | 30402998 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30403311 | 30403513 | 30403311 | ID=MS.gene27571.t1.exon7;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30403311 | 30403513 | 30403311 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30404806 | 30405007 | 30404806 | ID=MS.gene27571.t1.exon8;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30404806 | 30405007 | 30404806 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30405095 | 30405145 | 30405095 | ID=MS.gene27571.t1.exon9;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30405095 | 30405145 | 30405095 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30405239 | 30405337 | 30405239 | ID=MS.gene27571.t1.exon10;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30405239 | 30405337 | 30405239 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30405428 | 30405487 | 30405428 | ID=MS.gene27571.t1.exon11;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30405428 | 30405487 | 30405428 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30405937 | 30406061 | 30405937 | ID=MS.gene27571.t1.exon12;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30405937 | 30406061 | 30405937 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| chr7.2 | exon | 30406447 | 30407632 | 30406447 | ID=MS.gene27571.t1.exon13;Parent=MS.gene27571.t1 |
| chr7.2 | CDS | 30406447 | 30407632 | 30406447 | ID=cds.MS.gene27571.t1;Parent=MS.gene27571.t1 |
| Gene Sequence |
| Protein sequence |
