AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056972

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056972.t1 MTR_7g092770 99.613 775 3 0 1 775 1 775 0.0 1606
MS.gene056972.t1 MTR_0305s0020 93.428 776 48 3 1 775 1 774 0.0 1498
MS.gene056972.t1 MTR_4g066150 81.982 777 131 7 1 775 1 770 0.0 1315
MS.gene056972.t1 MTR_3g027150 68.734 790 225 7 7 775 34 822 0.0 1165
MS.gene056972.t1 MTR_4g023460 69.289 788 220 8 7 775 358 1142 0.0 1155
MS.gene056972.t1 MTR_5g010390 69.063 779 228 6 6 775 233 1007 0.0 1151
MS.gene056972.t1 MTR_0291s0010 67.215 790 241 6 3 775 9 797 0.0 1145
MS.gene056972.t1 MTR_4g033215 65.290 775 256 8 8 775 276 1044 0.0 1063
MS.gene056972.t1 MTR_8g031270 60.307 781 291 8 6 775 231 1003 0.0 997
MS.gene056972.t1 MTR_7g076900 59.696 789 287 10 8 775 235 1013 0.0 972
MS.gene056972.t1 MTR_4g057675 58.270 786 304 10 2 775 10 783 0.0 890
MS.gene056972.t1 MTR_4g071870 56.234 786 286 12 2 775 10 749 0.0 856
MS.gene056972.t1 MTR_4g107850 52.964 776 319 14 19 775 290 1038 0.0 808
MS.gene056972.t1 MTR_6g027540 51.175 766 325 13 30 775 273 1009 0.0 775
MS.gene056972.t1 MTR_6g028050 48.105 765 357 13 29 775 284 1026 0.0 738
MS.gene056972.t1 MTR_1g015540 48.528 781 369 13 12 775 9 773 0.0 696
MS.gene056972.t1 MTR_5g096980 42.125 781 415 13 8 775 7 763 0.0 603
MS.gene056972.t1 MTR_4g023250 66.923 130 41 1 645 774 1 128 3.76e-54 183
MS.gene056972.t1 MTR_4g023230 49.180 122 47 1 562 683 49 155 6.30e-32 122
MS.gene056972.t1 MTR_4g023390 50.000 104 30 1 648 751 16 97 2.32e-25 101
MS.gene056972.t1 MTR_7g052280 67.089 79 2 2 247 325 1 55 9.12e-25 98.2
MS.gene056972.t1 MTR_4g023240 66.667 60 20 0 496 555 10 69 9.51e-21 87.0
MS.gene056972.t1 MTR_2g027360 31.783 129 75 4 40 161 3 125 5.12e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056972.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene056972.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene056972.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene056972.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene056972.t1 AT1G51570 88.288 777 88 3 1 775 1 776 0.0 1437
MS.gene056972.t1 AT5G12970 81.105 778 135 7 1 775 1 769 0.0 1305
MS.gene056972.t1 AT5G06850 67.090 787 238 7 7 775 11 794 0.0 1150
MS.gene056972.t1 AT4G11610 68.205 780 232 7 6 775 238 1011 0.0 1140
MS.gene056972.t1 AT4G11610 68.205 780 232 7 6 775 234 1007 0.0 1140
MS.gene056972.t1 AT4G11610 68.205 780 232 7 6 775 101 874 0.0 1138
MS.gene056972.t1 AT5G48060 66.624 779 249 7 7 775 259 1036 0.0 1118
MS.gene056972.t1 AT1G22610 65.613 791 250 9 1 775 245 1029 0.0 1080
MS.gene056972.t1 AT4G00700 59.515 783 301 6 6 775 227 1006 0.0 978
MS.gene056972.t1 AT4G00700 59.515 783 301 6 6 775 227 1006 0.0 978
MS.gene056972.t1 AT3G61300 58.922 779 290 13 4 775 217 972 0.0 945
MS.gene056972.t1 AT4G20080 57.827 773 307 10 9 775 15 774 0.0 927
MS.gene056972.t1 AT1G04150 57.828 792 290 13 8 775 241 1012 0.0 925
MS.gene056972.t1 AT1G74720 52.441 799 341 13 2 775 297 1081 0.0 823
MS.gene056972.t1 AT3G03680 52.529 771 313 18 31 775 274 1017 0.0 780
MS.gene056972.t1 AT5G17980 49.141 757 354 12 29 775 314 1049 0.0 756
MS.gene056972.t1 AT3G61720 38.923 817 424 24 7 775 6 795 1.43e-168 506
MS.gene056972.t1 AT5G03435 40.874 778 402 24 7 769 6 740 1.49e-167 502
MS.gene056972.t1 AT5G03435 43.426 578 291 16 7 575 6 556 2.49e-141 427
MS.gene056972.t1 AT5G44760 51.372 401 146 11 8 400 5 364 9.11e-123 377
MS.gene056972.t1 AT5G44760 23.664 524 283 14 179 677 20 451 6.67e-20 94.4
MS.gene056972.t1 AT1G03370 27.459 244 160 8 40 280 3 232 5.83e-14 76.3
MS.gene056972.t1 AT1G03370 27.459 244 160 8 40 280 3 232 8.25e-14 76.3

Find 214 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTATGTGAAGGCTATTT+TGG 0.149556 7.3:+61711615 MS.gene056972:CDS
TGAAAAGCATGTTGTTATTA+TGG 0.199124 7.3:+61711867 MS.gene056972:CDS
CTGTGCCACTCAATTTCTTC+AGG 0.239203 7.3:+61713222 MS.gene056972:CDS
TCCAACTGGGGTGAAGAAAA+TGG 0.246387 7.3:+61712386 MS.gene056972:CDS
TCGAGCTGGCTGACTGTTAA+TGG 0.283050 7.3:-61712507 None:intergenic
AAATGCAGTATCTTTATGTT+AGG 0.287072 7.3:+61711056 MS.gene056972:CDS
CTTCTAGTTCTTCATCCAAC+TGG 0.290568 7.3:+61712372 MS.gene056972:CDS
CTCCTAAGCTTTGGTATTTG+AGG 0.293908 7.3:+61711536 MS.gene056972:CDS
CCTAGCAGTTCCTCTTTGTT+AGG 0.294279 7.3:-61711769 None:intergenic
ACAAACTGTTGTCGGGGATT+TGG 0.302220 7.3:+61713019 MS.gene056972:CDS
AGAAGGTGGTTATCATGTTT+TGG 0.311177 7.3:+61711948 MS.gene056972:CDS
TTGGAGTTTGGTACTATAGA+TGG 0.323138 7.3:+61712838 MS.gene056972:CDS
ATGCCGATGAAATCAAATAA+TGG 0.326327 7.3:+61712075 MS.gene056972:CDS
GGGAGCTGATGCTGGCTGTT+TGG 0.327899 7.3:+61711407 MS.gene056972:CDS
TCTTTCAACAGAAAATCTTC+TGG 0.345233 7.3:-61710965 None:intergenic
AACTCTTCATCTAGTTCGTC+AGG 0.348361 7.3:-61712918 None:intergenic
TGCGGCGCCAGAGGACTATC+AGG 0.355118 7.3:-61711343 None:intergenic
GTGGGGATATTGAATGCTTC+GGG 0.361234 7.3:+61712048 MS.gene056972:CDS
CTGATGCTCTTGCAAATATT+AGG 0.364946 7.3:+61711497 MS.gene056972:CDS
GACTGCAGTCTTTGCTCAGC+TGG 0.373358 7.3:+61713057 MS.gene056972:CDS
ATTGTTGGTAAGATAAGTTC+AGG 0.373990 7.3:-61712795 None:intergenic
TTTGAATCTCTTTGTCCTCC+AGG 0.374663 7.3:-61712282 None:intergenic
CAAGTTGTGGCTCTTCTCAC+TGG 0.375373 7.3:+61713155 MS.gene056972:CDS
TCCACAGCTGTTTCGCCGTT+GGG 0.377277 7.3:-61712002 None:intergenic
GCTTACTGTGTAGCAAAGTA+TGG 0.377309 7.3:+61712114 MS.gene056972:CDS
TGAATCAGAACTGTTGTGAT+AGG 0.382320 7.3:-61712744 None:intergenic
TCCTAAGCTTTGGTATTTGA+GGG 0.385923 7.3:+61711537 MS.gene056972:CDS
GAAGGATCGGATTCAGGCTT+CGG 0.396181 7.3:+61711225 MS.gene056972:CDS
GCTGATGCTGGCTGTTTGGA+TGG 0.398155 7.3:+61711411 MS.gene056972:CDS
CACCTTGGTGGTAAGGTCTC+TGG 0.400603 7.3:+61710998 MS.gene056972:CDS
GAAGTCGAGTATTGGAGTTT+TGG 0.405068 7.3:+61712023 MS.gene056972:CDS
CCGTGCACTGTCATTACAAT+TGG 0.408435 7.3:+61712219 MS.gene056972:CDS
AGTGGGGATATTGAATGCTT+CGG 0.413329 7.3:+61712047 MS.gene056972:CDS
TCGGATGCGGCGACGGTTAG+TGG 0.413525 7.3:+61711472 MS.gene056972:CDS
GTCTGATAAGGGAAGATTCC+CGG 0.415295 7.3:+61711591 MS.gene056972:CDS
GAGAAATTCAACTGGCTGTA+AGG 0.416142 7.3:+61712409 MS.gene056972:CDS
TTCCACAGCTGTTTCGCCGT+TGG 0.421819 7.3:-61712003 None:intergenic
GACTAATCCTGAATGGAATC+AGG 0.424124 7.3:+61711189 MS.gene056972:CDS
TTCTAGTTCTTCATCCAACT+GGG 0.424420 7.3:+61712373 MS.gene056972:CDS
CATATGAGGGTCTGTCTAGA+AGG 0.427742 7.3:+61711931 MS.gene056972:CDS
TGCCGATGAAATCAAATAAT+GGG 0.427885 7.3:+61712076 MS.gene056972:CDS
CTACCTGCGAAAGATGTTAC+TGG 0.428150 7.3:+61711097 MS.gene056972:CDS
TCCATGTGAGGTGGGTGCCT+TGG 0.428924 7.3:-61712864 None:intergenic
ACAAACCTGTGAACACTAGA+TGG 0.430517 7.3:+61711836 MS.gene056972:CDS
AGAAGAGCCACAACTTGAAA+TGG 0.431378 7.3:-61713149 None:intergenic
GAATGAGGATTTGATGTTTG+TGG 0.433783 7.3:+61711693 MS.gene056972:CDS
TGCTGAGCCGCCACTGAGAA+AGG 0.435476 7.3:+61712578 MS.gene056972:CDS
AGGAAGAGTGATAAGGTGAG+AGG 0.436722 7.3:+61711385 MS.gene056972:CDS
TGTTATTCCCTTACAGATGA+TGG 0.437429 7.3:+61711798 MS.gene056972:CDS
CTTACCACCAAGGTGGGGTT+TGG 0.439462 7.3:-61710990 None:intergenic
AATGCAGTATCTTTATGTTA+GGG 0.439908 7.3:+61711057 MS.gene056972:CDS
GGACTTGCAACCGTCTGATA+AGG 0.440825 7.3:+61711579 MS.gene056972:CDS
CATTTGCTCAACAAGGTCAT+AGG 0.445253 7.3:-61711038 None:intergenic
CTATCAGGAGGAACCCTCTT+CGG 0.447291 7.3:-61711328 None:intergenic
GGTTTGACCAAATCTGCAAT+TGG 0.447777 7.3:+61712715 MS.gene056972:CDS
GGAGGTAGTGGAATATATGC+TGG 0.448097 7.3:+61712599 MS.gene056972:CDS
CCAAGCTTGACTTCAACATA+AGG 0.450353 7.3:-61711130 None:intergenic
CTCCCATTATTTGATTTCAT+CGG 0.451057 7.3:-61712078 None:intergenic
TTGCAAGCAGGATTCATATG+AGG 0.451536 7.3:+61711917 MS.gene056972:CDS
TGTGACTCCATTTCAAGTTG+TGG 0.455642 7.3:+61713142 MS.gene056972:CDS
TGTATCTATCTCCTAAGCTT+TGG 0.469644 7.3:+61711527 MS.gene056972:CDS
CCAACTGGGGTGAAGAAAAT+GGG 0.470245 7.3:+61712387 MS.gene056972:CDS
GTAGGATACAAACTGTTGTC+GGG 0.474674 7.3:+61713012 MS.gene056972:CDS
TCTCCGGTCCATCATCTGTA+AGG 0.477605 7.3:-61711806 None:intergenic
GGAGGATAGGAAGAGTGATA+AGG 0.478220 7.3:+61711378 MS.gene056972:CDS
CAGGTTTGTGATCGAGTCTC+CGG 0.480206 7.3:-61711822 None:intergenic
AAGCATGTTGTTATTATGGA+AGG 0.483057 7.3:+61711871 MS.gene056972:CDS
TGCCACTCAATTTCTTCAGG+AGG 0.483882 7.3:+61713225 MS.gene056972:CDS
GGATGAATGTAATGCATCTT+GGG 0.484486 7.3:-61712486 None:intergenic
AAAATCAGTGGCTCCTCAAA+CGG 0.484536 7.3:-61711724 None:intergenic
CAGCTGTGGAAGTCGAGTAT+TGG 0.484621 7.3:+61712015 MS.gene056972:CDS
AAGAGGTAAAGGAAAATTGT+TGG 0.485200 7.3:-61712810 None:intergenic
GAAAATGGGAGAAATTCAAC+TGG 0.487642 7.3:+61712401 MS.gene056972:CDS
GGAAGAGTGATAAGGTGAGA+GGG 0.488372 7.3:+61711386 MS.gene056972:CDS
GGTGAGAGGGGAGCTGATGC+TGG 0.489453 7.3:+61711399 MS.gene056972:CDS
CAAACCCCACCTTGGTGGTA+AGG 0.491282 7.3:+61710991 MS.gene056972:CDS
GCATCCGAGTGCCACGCCTC+AGG 0.494760 7.3:-61711457 None:intergenic
GACTTGCAACCGTCTGATAA+GGG 0.495169 7.3:+61711580 MS.gene056972:CDS
TGGATGAATGTAATGCATCT+TGG 0.496196 7.3:-61712487 None:intergenic
GTCGGGGATTTGGCGACTCA+AGG 0.497341 7.3:+61713029 MS.gene056972:CDS
ATCTTTCGCAGGTAGCTCCT+TGG 0.498641 7.3:-61711089 None:intergenic
TAGCAAAGTATGGACAGAAA+TGG 0.499639 7.3:+61712124 MS.gene056972:CDS
CTCAGCACGGCTAAGTCTCA+TGG 0.501223 7.3:-61712562 None:intergenic
GGCGCCGCAGTGGTATAGAT+TGG 0.501455 7.3:+61711357 MS.gene056972:CDS
AACAGAAAATCTTCTGGAGG+AGG 0.502805 7.3:-61710959 None:intergenic
AGAAGAAGACTAATCCTGAA+TGG 0.504293 7.3:+61711182 MS.gene056972:CDS
AAGAAATTGAGTGGCACAGA+AGG 0.506210 7.3:-61713218 None:intergenic
AGCAAAGTATGGACAGAAAT+GGG 0.506383 7.3:+61712125 MS.gene056972:CDS
TGAGGCGTGGCACTCGGATG+CGG 0.507184 7.3:+61711459 MS.gene056972:CDS
TATGGAAGGGGACAAGAAGA+AGG 0.509014 7.3:+61711885 MS.gene056972:CDS
ATAGCCTTCACATAAACCTC+CGG 0.509665 7.3:-61711610 None:intergenic
GAAGAGTGATAAGGTGAGAG+GGG 0.511445 7.3:+61711387 MS.gene056972:CDS
CAAGCTTGACTTCAACATAA+GGG 0.511908 7.3:-61711129 None:intergenic
GTTTCCTGAGGCGTGGCACT+CGG 0.515073 7.3:+61711453 MS.gene056972:CDS
GCATGTTGTTATTATGGAAG+GGG 0.516659 7.3:+61711873 MS.gene056972:CDS
ACCCTCAAATACCAAAGCTT+AGG 0.516986 7.3:-61711538 None:intergenic
GGTTCCTCCTGATAGTCCTC+TGG 0.518825 7.3:+61711336 MS.gene056972:CDS
TAATGCATCTTGGGCAGCAA+TGG 0.519377 7.3:-61712477 None:intergenic
GGTGGAATGAGCAGTATACT+TGG 0.519885 7.3:+61712184 MS.gene056972:CDS
CGGTGCAAAGCTATCGATGA+TGG 0.520044 7.3:-61712160 None:intergenic
CTGATGCTGGCTGTTTGGAT+GGG 0.522554 7.3:+61711412 MS.gene056972:CDS
TGTGGCTGCAGAACCGTTTG+AGG 0.525708 7.3:+61711711 MS.gene056972:CDS
TTGAACCATCTAGTGTTCAC+AGG 0.525843 7.3:-61711841 None:intergenic
ATGAAATCAAATAATGGGAG+GGG 0.526239 7.3:+61712081 MS.gene056972:CDS
CCTTATGTTGAAGTCAAGCT+TGG 0.526765 7.3:+61711130 MS.gene056972:CDS
TTGAGTGGATTAATTGCTGT+TGG 0.528890 7.3:+61712687 MS.gene056972:CDS
GGAAGCTTGTGACGAAACCT+TGG 0.530590 7.3:-61713197 None:intergenic
GCCAAGGCACCCACCTCACA+TGG 0.530781 7.3:+61712863 MS.gene056972:CDS
GATTCAGGCTTCGGTTCTTG+AGG 0.530948 7.3:+61711234 MS.gene056972:CDS
GGTTAATGTGATCGAGGCAC+AGG 0.532299 7.3:+61711558 MS.gene056972:CDS
TTCCCTTACAGATGATGGAC+CGG 0.532408 7.3:+61711803 MS.gene056972:CDS
AGCATGCAATCAGTTCTTGC+AGG 0.532832 7.3:-61713251 None:intergenic
TCTTTATGTTAGGGTTGTGA+AGG 0.534597 7.3:+61711066 MS.gene056972:CDS
GAATCAGAACTGTTGTGATA+GGG 0.535162 7.3:-61712743 None:intergenic
ATCTAGTTCGTCAGGGTGTG+CGG 0.535646 7.3:-61712910 None:intergenic
CACCATGGTGGTGATAAGCC+TGG 0.536704 7.3:+61712264 MS.gene056972:CDS
AGGAAATCAAGTTTGCAAGC+AGG 0.537088 7.3:+61711905 MS.gene056972:CDS
GGTAGGATACAAACTGTTGT+CGG 0.541500 7.3:+61713011 MS.gene056972:CDS
AGCATGTTGTTATTATGGAA+GGG 0.541928 7.3:+61711872 MS.gene056972:CDS
GGACTAGAATCTCTCAGAGC+AGG 0.546735 7.3:+61711653 MS.gene056972:CDS
TTCTCAGTGGCGGCTCAGCA+CGG 0.549574 7.3:-61712575 None:intergenic
GATGCCTCAGACTGTCGAGC+TGG 0.550117 7.3:-61712521 None:intergenic
TCTCAATGAGATTCCGAAGA+GGG 0.552069 7.3:+61711315 MS.gene056972:CDS
AGTGGTATAGATTGGAGGAT+AGG 0.552452 7.3:+61711365 MS.gene056972:CDS
TAGCCTTCACATAAACCTCC+GGG 0.554227 7.3:-61711609 None:intergenic
GCCACTGAGAAAGGAGGTAG+TGG 0.554380 7.3:+61712587 MS.gene056972:CDS
TGCAAGCAGGATTCATATGA+GGG 0.556261 7.3:+61711918 MS.gene056972:CDS
CGCATCCTCACGATGTCAGA+AGG 0.560574 7.3:-61712963 None:intergenic
AGACGTGTGTCCATGTGAGG+TGG 0.561408 7.3:-61712873 None:intergenic
CTGAGAGATTCTAGTCCTCA+AGG 0.563761 7.3:-61711647 None:intergenic
GAGACCAAACCCCACCTTGG+TGG 0.564488 7.3:+61710986 MS.gene056972:CDS
GTGGCACTCGGATGCGGCGA+CGG 0.568143 7.3:+61711465 MS.gene056972:CDS
GATTAATTGCTGTTGGAAAG+TGG 0.569868 7.3:+61712694 MS.gene056972:CDS
CAGTCTCGAGTGTGGAAAGA+CGG 0.571907 7.3:-61712323 None:intergenic
CAGGGTGTGCGGAATCAGCA+TGG 0.574507 7.3:-61712899 None:intergenic
GACAACAGTTTGTATCCTAC+CGG 0.574843 7.3:-61713009 None:intergenic
TGTTAGGGTTGTGAAGGCCA+AGG 0.575221 7.3:+61711072 MS.gene056972:CDS
ATGTCAGAAGGTCTTGTGGT+TGG 0.576119 7.3:-61712951 None:intergenic
ATAGTCCTCTGGCGCCGCAG+TGG 0.576174 7.3:+61711347 MS.gene056972:CDS
ATGAAGAACTAGAAGCGGAT+AGG 0.578613 7.3:-61712364 None:intergenic
TTCAACAGAAAATCTTCTGG+AGG 0.580397 7.3:-61710962 None:intergenic
CTATACCACTGCGGCGCCAG+AGG 0.580494 7.3:-61711352 None:intergenic
CCTAACAAAGAGGAACTGCT+AGG 0.581474 7.3:+61711769 MS.gene056972:CDS
TTCTTCGCATACTCCACATG+TGG 0.584507 7.3:-61712632 None:intergenic
AGAGACCTTACCACCAAGGT+GGG 0.585249 7.3:-61710996 None:intergenic
GGGAATCTTCCCTTATCAGA+CGG 0.587236 7.3:-61711589 None:intergenic
TATCAATCCGATGTGGAATG+AGG 0.587518 7.3:+61711678 MS.gene056972:CDS
CACGATGTCAGAAGGTCTTG+TGG 0.588138 7.3:-61712955 None:intergenic
TTGTTGGTAAGATAAGTTCA+GGG 0.591225 7.3:-61712794 None:intergenic
GCCGCAGTGGTATAGATTGG+AGG 0.592270 7.3:+61711360 MS.gene056972:CDS
GCCCAACGGCGAAACAGCTG+TGG 0.595415 7.3:+61712001 MS.gene056972:CDS
GTCAAGCTTGGTAATTACAA+AGG 0.597001 7.3:+61711142 MS.gene056972:CDS
TGAAATCAAATAATGGGAGG+GGG 0.602820 7.3:+61712082 MS.gene056972:CDS
ATTCCCGGAGGTTTATGTGA+AGG 0.604425 7.3:+61711606 MS.gene056972:CDS
CTTCCAGTAACATCTTTCGC+AGG 0.611302 7.3:-61711100 None:intergenic
AGCTGATGAAGCGTTTCCTG+AGG 0.615613 7.3:+61711441 MS.gene056972:CDS
CAGTAGTGATCTTCGCCCAA+CGG 0.615629 7.3:+61711987 MS.gene056972:CDS
AGGGTGTGCGGAATCAGCAT+GGG 0.615690 7.3:-61712898 None:intergenic
CCAATTGTAATGACAGTGCA+CGG 0.615694 7.3:-61712219 None:intergenic
TCAGCCAGCTCGACAGTCTG+AGG 0.617012 7.3:+61712517 MS.gene056972:CDS
ATGAAGCGTTTCCTGAGGCG+TGG 0.618045 7.3:+61711446 MS.gene056972:CDS
GACTCGATCAGTCTCGAGTG+TGG 0.619232 7.3:-61712331 None:intergenic
CTCCGGTCCATCATCTGTAA+GGG 0.619971 7.3:-61711805 None:intergenic
GATCGTCTTAGAAGTATCGC+CGG 0.621352 7.3:+61712990 MS.gene056972:CDS
TCGATAGCTTTGCACCGAGG+TGG 0.623002 7.3:+61712166 MS.gene056972:CDS
GACGTGTGTCCATGTGAGGT+GGG 0.624040 7.3:-61712872 None:intergenic
AAAGAGACCAAACCCCACCT+TGG 0.627049 7.3:+61710983 MS.gene056972:CDS
GAGTTTGGTACTATAGATGG+AGG 0.627109 7.3:+61712841 MS.gene056972:CDS
GTGGAATGAGCAGTATACTT+GGG 0.627653 7.3:+61712185 MS.gene056972:CDS
GTGGAATATATGCTGGATGT+CGG 0.627998 7.3:+61712606 MS.gene056972:CDS
CTAACAAAGAGGAACTGCTA+GGG 0.630417 7.3:+61711770 MS.gene056972:CDS
TCTTGCAAATATTAGGTCGA+AGG 0.630876 7.3:+61711504 MS.gene056972:CDS
GGTACTATAGATGGAGGCCA+AGG 0.630984 7.3:+61712847 MS.gene056972:CDS
CTTTGCTACACAGTAAGCAT+CGG 0.631955 7.3:-61712109 None:intergenic
CGATGAAATCAAATAATGGG+AGG 0.632153 7.3:+61712079 MS.gene056972:CDS
GATACTGCATTTGCTCAACA+AGG 0.633581 7.3:-61711045 None:intergenic
TTTGAAACAACAAGATGCAG+AGG 0.633933 7.3:+61710936 None:intergenic
CTCCAGGCTTATCACCACCA+TGG 0.635088 7.3:-61712266 None:intergenic
ATCAAATCCTCATTCCACAT+CGG 0.635499 7.3:-61711685 None:intergenic
TCCACTACCTCCTTTCTCAG+TGG 0.637195 7.3:-61712588 None:intergenic
ACTACCTCCTTTCTCAGTGG+CGG 0.637292 7.3:-61712585 None:intergenic
ACTCTTCATCTAGTTCGTCA+GGG 0.644466 7.3:-61712917 None:intergenic
GATGAAATCAAATAATGGGA+GGG 0.644856 7.3:+61712080 MS.gene056972:CDS
GAATGAGCAGTATACTTGGG+AGG 0.645094 7.3:+61712188 MS.gene056972:CDS
TCCTCCACACTCAAAATCAG+TGG 0.646052 7.3:-61711736 None:intergenic
CAGAGACCTTACCACCAAGG+TGG 0.649836 7.3:-61710997 None:intergenic
TAGGATACAAACTGTTGTCG+GGG 0.649861 7.3:+61713013 MS.gene056972:CDS
TTTGAGGGTTAATGTGATCG+AGG 0.650146 7.3:+61711552 MS.gene056972:CDS
ATGAGGGTCTGTCTAGAAGG+TGG 0.652057 7.3:+61711934 MS.gene056972:CDS
AACCTCCTGAAGAAATTGAG+TGG 0.658154 7.3:-61713227 None:intergenic
TAGGGTTGCGCCTAACAAAG+AGG 0.658831 7.3:+61711759 MS.gene056972:CDS
CAAGACCTTCTGACATCGTG+AGG 0.659186 7.3:+61712958 MS.gene056972:CDS
TGGATGTCGGTTCCCACATG+TGG 0.659218 7.3:+61712619 MS.gene056972:CDS
CTTCTTCTCGAAATGCCTCG+TGG 0.659513 7.3:-61711167 None:intergenic
GTTGGATGAAGAACTAGAAG+CGG 0.659701 7.3:-61712369 None:intergenic
GTCTTAGAAGTATCGCCGGT+AGG 0.663223 7.3:+61712994 MS.gene056972:CDS
TTTATGTGTTGAGACATCCA+AGG 0.671355 7.3:+61713180 MS.gene056972:CDS
CTCCAGAGACCTTACCACCA+AGG 0.672025 7.3:-61711000 None:intergenic
TCTAGTTCTTCATCCAACTG+GGG 0.674320 7.3:+61712374 MS.gene056972:CDS
GCAGGAGTATCAATCCGATG+TGG 0.681926 7.3:+61711671 MS.gene056972:CDS
GATAACTGTCACTTGCACCA+TGG 0.683890 7.3:+61712249 MS.gene056972:CDS
ATCTCAATGAGATTCCGAAG+AGG 0.685604 7.3:+61711314 MS.gene056972:CDS
GAGACCTTACCACCAAGGTG+GGG 0.689512 7.3:-61710995 None:intergenic
GAGAGACGTGTGTCCATGTG+AGG 0.692622 7.3:-61712876 None:intergenic
TCTTCGCATACTCCACATGT+GGG 0.694693 7.3:-61712631 None:intergenic
GGCGCCAGAGGACTATCAGG+AGG 0.702158 7.3:-61711340 None:intergenic
TGAGCCGCCACTGAGAAAGG+AGG 0.716833 7.3:+61712581 MS.gene056972:CDS
GTATACTGCTCATTCCACCT+CGG 0.723662 7.3:-61712180 None:intergenic
AACTGTCACTTGCACCATGG+TGG 0.724351 7.3:+61712252 MS.gene056972:CDS
TCATCGATAGCTTTGCACCG+AGG 0.746528 7.3:+61712163 MS.gene056972:CDS
CATGGTGGTGATAAGCCTGG+AGG 0.753318 7.3:+61712267 MS.gene056972:CDS
TCCTCCAATCTATACCACTG+CGG 0.756616 7.3:-61711361 None:intergenic
TGATAAGGGAAGATTCCCGG+AGG 0.760486 7.3:+61711594 MS.gene056972:CDS
GTAATTACAAAGGAACCACG+AGG 0.808607 7.3:+61711152 MS.gene056972:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAATGCAGTATCTTTATGTT+AGG + chr7.3:61711056-61711075 MS.gene056972:CDS 25.0%
! AATGCAGTATCTTTATGTTA+GGG + chr7.3:61711057-61711076 MS.gene056972:CDS 25.0%
!! TGAAAAGCATGTTGTTATTA+TGG + chr7.3:61711867-61711886 MS.gene056972:CDS 25.0%
!! TTTGTGAAGGATGATTTTAT+CGG + chr7.3:61711277-61711296 MS.gene056972:CDS 25.0%
AAGAGGTAAAGGAAAATTGT+TGG - chr7.3:61712813-61712832 None:intergenic 30.0%
ATGCCGATGAAATCAAATAA+TGG + chr7.3:61712075-61712094 MS.gene056972:CDS 30.0%
GGACAAAGAGATTCAAAAAT+CGG + chr7.3:61712288-61712307 MS.gene056972:CDS 30.0%
TCTTTCAACAGAAAATCTTC+TGG - chr7.3:61710968-61710987 None:intergenic 30.0%
TGCCGATGAAATCAAATAAT+GGG + chr7.3:61712076-61712095 MS.gene056972:CDS 30.0%
! AAGCATGTTGTTATTATGGA+AGG + chr7.3:61711871-61711890 MS.gene056972:CDS 30.0%
! AGCATGTTGTTATTATGGAA+GGG + chr7.3:61711872-61711891 MS.gene056972:CDS 30.0%
! ATGAAATCAAATAATGGGAG+GGG + chr7.3:61712081-61712100 MS.gene056972:CDS 30.0%
! ATTGTTGGTAAGATAAGTTC+AGG - chr7.3:61712798-61712817 None:intergenic 30.0%
! CTCCCATTATTTGATTTCAT+CGG - chr7.3:61712081-61712100 None:intergenic 30.0%
! GAAAGATAAGGATTTTGTGA+AGG + chr7.3:61711264-61711283 MS.gene056972:CDS 30.0%
! GATGAAATCAAATAATGGGA+GGG + chr7.3:61712080-61712099 MS.gene056972:CDS 30.0%
! TGAGGTTTTTGTGAAAGATA+AGG + chr7.3:61711252-61711271 MS.gene056972:CDS 30.0%
! TTCCTTTACCTCTTTTTGAT+TGG + chr7.3:61712819-61712838 MS.gene056972:CDS 30.0%
! TTGTTGGTAAGATAAGTTCA+GGG - chr7.3:61712797-61712816 None:intergenic 30.0%
!! GTTTATGTGAAGGCTATTTT+GGG + chr7.3:61711616-61711635 MS.gene056972:CDS 30.0%
!!! AGCCAATTTTTTCAGAATCA+TGG + chr7.3:61712659-61712678 MS.gene056972:CDS 30.0%
!!! CAATTTTTTCAGAATCATGG+GGG + chr7.3:61712662-61712681 MS.gene056972:CDS 30.0%
!!! CCAATTTTTTCAGAATCATG+GGG + chr7.3:61712661-61712680 MS.gene056972:CDS 30.0%
!!! GCCAATTTTTTCAGAATCAT+GGG + chr7.3:61712660-61712679 MS.gene056972:CDS 30.0%
!!! TTTTTGCTTTTTCGAAGGAT+CGG + chr7.3:61711212-61711231 MS.gene056972:CDS 30.0%
ACCAAACTCCAATCAAAAAG+AGG - chr7.3:61712830-61712849 None:intergenic 35.0%
AGAAGAAGACTAATCCTGAA+TGG + chr7.3:61711182-61711201 MS.gene056972:CDS 35.0%
AGCAAAGTATGGACAGAAAT+GGG + chr7.3:61712125-61712144 MS.gene056972:CDS 35.0%
ATCAAATCCTCATTCCACAT+CGG - chr7.3:61711688-61711707 None:intergenic 35.0%
CAAGCTTGACTTCAACATAA+GGG - chr7.3:61711132-61711151 None:intergenic 35.0%
CTCCAATCAAAAAGAGGTAA+AGG - chr7.3:61712824-61712843 None:intergenic 35.0%
CTGATGCTCTTGCAAATATT+AGG + chr7.3:61711497-61711516 MS.gene056972:CDS 35.0%
GAAAATGGGAGAAATTCAAC+TGG + chr7.3:61712401-61712420 MS.gene056972:CDS 35.0%
GAATCAGAACTGTTGTGATA+GGG - chr7.3:61712746-61712765 None:intergenic 35.0%
GAATGAGGATTTGATGTTTG+TGG + chr7.3:61711693-61711712 MS.gene056972:CDS 35.0%
GGATGAATGTAATGCATCTT+GGG - chr7.3:61712489-61712508 None:intergenic 35.0%
TAGCAAAGTATGGACAGAAA+TGG + chr7.3:61712124-61712143 MS.gene056972:CDS 35.0%
TCTTGCAAATATTAGGTCGA+AGG + chr7.3:61711504-61711523 MS.gene056972:CDS 35.0%
TCTTTATGTTAGGGTTGTGA+AGG + chr7.3:61711066-61711085 MS.gene056972:CDS 35.0%
TGAATCAGAACTGTTGTGAT+AGG - chr7.3:61712747-61712766 None:intergenic 35.0%
TGGATGAATGTAATGCATCT+TGG - chr7.3:61712490-61712509 None:intergenic 35.0%
TGTATCTATCTCCTAAGCTT+TGG + chr7.3:61711527-61711546 MS.gene056972:CDS 35.0%
TGTTATTCCCTTACAGATGA+TGG + chr7.3:61711798-61711817 MS.gene056972:CDS 35.0%
TTCAACAGAAAATCTTCTGG+AGG - chr7.3:61710965-61710984 None:intergenic 35.0%
TTGGAGTTTGGTACTATAGA+TGG + chr7.3:61712838-61712857 MS.gene056972:CDS 35.0%
TTTATGTGTTGAGACATCCA+AGG + chr7.3:61713180-61713199 MS.gene056972:CDS 35.0%
! AGAAGGTGGTTATCATGTTT+TGG + chr7.3:61711948-61711967 MS.gene056972:CDS 35.0%
! ATGATTTTATCGGTCGTGTT+TGG + chr7.3:61711287-61711306 MS.gene056972:CDS 35.0%
! CCCCATGATTCTGAAAAAAT+TGG - chr7.3:61712664-61712683 None:intergenic 35.0%
! CGATGAAATCAAATAATGGG+AGG + chr7.3:61712079-61712098 MS.gene056972:CDS 35.0%
! GATTAATTGCTGTTGGAAAG+TGG + chr7.3:61712694-61712713 MS.gene056972:CDS 35.0%
! GCATGTTGTTATTATGGAAG+GGG + chr7.3:61711873-61711892 MS.gene056972:CDS 35.0%
! GGTTTATGTGAAGGCTATTT+TGG + chr7.3:61711615-61711634 MS.gene056972:CDS 35.0%
! GGTTTTTCCAATTGCAGATT+TGG - chr7.3:61712725-61712744 None:intergenic 35.0%
! GTCAAGCTTGGTAATTACAA+AGG + chr7.3:61711142-61711161 MS.gene056972:CDS 35.0%
! TCCTAAGCTTTGGTATTTGA+GGG + chr7.3:61711537-61711556 MS.gene056972:CDS 35.0%
! TGAAATCAAATAATGGGAGG+GGG + chr7.3:61712082-61712101 MS.gene056972:CDS 35.0%
!! ACCTCTTTTTGATTGGAGTT+TGG + chr7.3:61712826-61712845 MS.gene056972:CDS 35.0%
!! TTCTAGTTCTTCATCCAACT+GGG + chr7.3:61712373-61712392 MS.gene056972:CDS 35.0%
!! TTGAGTGGATTAATTGCTGT+TGG + chr7.3:61712687-61712706 MS.gene056972:CDS 35.0%
!!! AGTATTGGAGTTTTGGAAGT+GGG + chr7.3:61712030-61712049 MS.gene056972:CDS 35.0%
!!! TCAGGTTTTTGCTTTTTCGA+AGG + chr7.3:61711207-61711226 MS.gene056972:CDS 35.0%
AAAATCAGTGGCTCCTCAAA+CGG - chr7.3:61711727-61711746 None:intergenic 40.0%
AACCTCCTGAAGAAATTGAG+TGG - chr7.3:61713230-61713249 None:intergenic 40.0%
AAGAAATTGAGTGGCACAGA+AGG - chr7.3:61713221-61713240 None:intergenic 40.0%
ACAAACCTGTGAACACTAGA+TGG + chr7.3:61711836-61711855 MS.gene056972:CDS 40.0%
ACCCTCAAATACCAAAGCTT+AGG - chr7.3:61711541-61711560 None:intergenic 40.0%
AGAAGAGCCACAACTTGAAA+TGG - chr7.3:61713152-61713171 None:intergenic 40.0%
AGGAAATCAAGTTTGCAAGC+AGG + chr7.3:61711905-61711924 MS.gene056972:CDS 40.0%
AGTGGGGATATTGAATGCTT+CGG + chr7.3:61712047-61712066 MS.gene056972:CDS 40.0%
AGTGGTATAGATTGGAGGAT+AGG + chr7.3:61711365-61711384 MS.gene056972:CDS 40.0%
ATAGCCTTCACATAAACCTC+CGG - chr7.3:61711613-61711632 None:intergenic 40.0%
ATCTCAATGAGATTCCGAAG+AGG + chr7.3:61711314-61711333 MS.gene056972:CDS 40.0%
ATGAAGAACTAGAAGCGGAT+AGG - chr7.3:61712367-61712386 None:intergenic 40.0%
CATTTGCTCAACAAGGTCAT+AGG - chr7.3:61711041-61711060 None:intergenic 40.0%
CCAAGCTTGACTTCAACATA+AGG - chr7.3:61711133-61711152 None:intergenic 40.0%
CCAATTGTAATGACAGTGCA+CGG - chr7.3:61712222-61712241 None:intergenic 40.0%
CCTTATGTTGAAGTCAAGCT+TGG + chr7.3:61711130-61711149 MS.gene056972:CDS 40.0%
CTAACAAAGAGGAACTGCTA+GGG + chr7.3:61711770-61711789 MS.gene056972:CDS 40.0%
CTTTGCTACACAGTAAGCAT+CGG - chr7.3:61712112-61712131 None:intergenic 40.0%
GACAACAGTTTGTATCCTAC+CGG - chr7.3:61713012-61713031 None:intergenic 40.0%
GACTAATCCTGAATGGAATC+AGG + chr7.3:61711189-61711208 MS.gene056972:CDS 40.0%
GAGAAATTCAACTGGCTGTA+AGG + chr7.3:61712409-61712428 MS.gene056972:CDS 40.0%
GAGTTTGGTACTATAGATGG+AGG + chr7.3:61712841-61712860 MS.gene056972:CDS 40.0%
GATACTGCATTTGCTCAACA+AGG - chr7.3:61711048-61711067 None:intergenic 40.0%
GCAAAAACCTGATTCCATTC+AGG - chr7.3:61711199-61711218 None:intergenic 40.0%
GCTTACTGTGTAGCAAAGTA+TGG + chr7.3:61712114-61712133 MS.gene056972:CDS 40.0%
GGTAGGATACAAACTGTTGT+CGG + chr7.3:61713011-61713030 MS.gene056972:CDS 40.0%
GGTTTGACCAAATCTGCAAT+TGG + chr7.3:61712715-61712734 MS.gene056972:CDS 40.0%
GTAATTACAAAGGAACCACG+AGG + chr7.3:61711152-61711171 MS.gene056972:CDS 40.0%
GTAGGATACAAACTGTTGTC+GGG + chr7.3:61713012-61713031 MS.gene056972:CDS 40.0%
GTGGAATATATGCTGGATGT+CGG + chr7.3:61712606-61712625 MS.gene056972:CDS 40.0%
GTGGAATGAGCAGTATACTT+GGG + chr7.3:61712185-61712204 MS.gene056972:CDS 40.0%
GTTGGATGAAGAACTAGAAG+CGG - chr7.3:61712372-61712391 None:intergenic 40.0%
TAGGATACAAACTGTTGTCG+GGG + chr7.3:61713013-61713032 MS.gene056972:CDS 40.0%
TATCAATCCGATGTGGAATG+AGG + chr7.3:61711678-61711697 MS.gene056972:CDS 40.0%
TCTCAATGAGATTCCGAAGA+GGG + chr7.3:61711315-61711334 MS.gene056972:CDS 40.0%
TGCAAGCAGGATTCATATGA+GGG + chr7.3:61711918-61711937 MS.gene056972:CDS 40.0%
TTGAACCATCTAGTGTTCAC+AGG - chr7.3:61711844-61711863 None:intergenic 40.0%
TTGCAAGCAGGATTCATATG+AGG + chr7.3:61711917-61711936 MS.gene056972:CDS 40.0%
TTTGAATCTCTTTGTCCTCC+AGG - chr7.3:61712285-61712304 None:intergenic 40.0%
TTTGAGGGTTAATGTGATCG+AGG + chr7.3:61711552-61711571 MS.gene056972:CDS 40.0%
! AACAGAAAATCTTCTGGAGG+AGG - chr7.3:61710962-61710981 None:intergenic 40.0%
! AACTCTTCATCTAGTTCGTC+AGG - chr7.3:61712921-61712940 None:intergenic 40.0%
! ACAAAAAGTGCAGTAGCTCT+TGG - chr7.3:61713089-61713108 None:intergenic 40.0%
! ACTCTTCATCTAGTTCGTCA+GGG - chr7.3:61712920-61712939 None:intergenic 40.0%
! CTCCTAAGCTTTGGTATTTG+AGG + chr7.3:61711536-61711555 MS.gene056972:CDS 40.0%
!! CTTCTAGTTCTTCATCCAAC+TGG + chr7.3:61712372-61712391 MS.gene056972:CDS 40.0%
!! GATTTTGAGTGTGGAGGATA+GGG + chr7.3:61711741-61711760 MS.gene056972:CDS 40.0%
!! TCTAGTTCTTCATCCAACTG+GGG + chr7.3:61712374-61712393 MS.gene056972:CDS 40.0%
!! TGATTTTGAGTGTGGAGGAT+AGG + chr7.3:61711740-61711759 MS.gene056972:CDS 40.0%
!! TGTGACTCCATTTCAAGTTG+TGG + chr7.3:61713142-61713161 MS.gene056972:CDS 40.0%
!! TTTTGGGAAATCAGACCTTG+AGG + chr7.3:61711632-61711651 MS.gene056972:CDS 40.0%
!! TTTTTCGAAGGATCGGATTC+AGG + chr7.3:61711219-61711238 MS.gene056972:CDS 40.0%
!!! GAAGTCGAGTATTGGAGTTT+TGG + chr7.3:61712023-61712042 MS.gene056972:CDS 40.0%
!!! GAGTATTGGAGTTTTGGAAG+TGG + chr7.3:61712029-61712048 MS.gene056972:CDS 40.0%
!!! GTATTGGAGTTTTGGAAGTG+GGG + chr7.3:61712031-61712050 MS.gene056972:CDS 40.0%
ACAAACTGTTGTCGGGGATT+TGG + chr7.3:61713019-61713038 MS.gene056972:CDS 45.0%
AGCATGCAATCAGTTCTTGC+AGG - chr7.3:61713254-61713273 None:intergenic 45.0%
AGGAAGAGTGATAAGGTGAG+AGG + chr7.3:61711385-61711404 MS.gene056972:CDS 45.0%
ATTCCCGGAGGTTTATGTGA+AGG + chr7.3:61711606-61711625 MS.gene056972:CDS 45.0%
CATATGAGGGTCTGTCTAGA+AGG + chr7.3:61711931-61711950 MS.gene056972:CDS 45.0%
CCAACTGGGGTGAAGAAAAT+GGG + chr7.3:61712387-61712406 MS.gene056972:CDS 45.0%
CCGTGCACTGTCATTACAAT+TGG + chr7.3:61712219-61712238 MS.gene056972:CDS 45.0%
CCTAACAAAGAGGAACTGCT+AGG + chr7.3:61711769-61711788 MS.gene056972:CDS 45.0%
CCTAGCAGTTCCTCTTTGTT+AGG - chr7.3:61711772-61711791 None:intergenic 45.0%
CTACCTGCGAAAGATGTTAC+TGG + chr7.3:61711097-61711116 MS.gene056972:CDS 45.0%
CTGAGAGATTCTAGTCCTCA+AGG - chr7.3:61711650-61711669 None:intergenic 45.0%
CTTCCAGTAACATCTTTCGC+AGG - chr7.3:61711103-61711122 None:intergenic 45.0%
GAAGAGTGATAAGGTGAGAG+GGG + chr7.3:61711387-61711406 MS.gene056972:CDS 45.0%
GAATGAGCAGTATACTTGGG+AGG + chr7.3:61712188-61712207 MS.gene056972:CDS 45.0%
GACTTGCAACCGTCTGATAA+GGG + chr7.3:61711580-61711599 MS.gene056972:CDS 45.0%
GGAAGAGTGATAAGGTGAGA+GGG + chr7.3:61711386-61711405 MS.gene056972:CDS 45.0%
GGAGGATAGGAAGAGTGATA+AGG + chr7.3:61711378-61711397 MS.gene056972:CDS 45.0%
GGGAATCTTCCCTTATCAGA+CGG - chr7.3:61711592-61711611 None:intergenic 45.0%
GGTGGAATGAGCAGTATACT+TGG + chr7.3:61712184-61712203 MS.gene056972:CDS 45.0%
GTATACTGCTCATTCCACCT+CGG - chr7.3:61712183-61712202 None:intergenic 45.0%
GTCTGATAAGGGAAGATTCC+CGG + chr7.3:61711591-61711610 MS.gene056972:CDS 45.0%
GTGGGGATATTGAATGCTTC+GGG + chr7.3:61712048-61712067 MS.gene056972:CDS 45.0%
TAATGCATCTTGGGCAGCAA+TGG - chr7.3:61712480-61712499 None:intergenic 45.0%
TAGCCTTCACATAAACCTCC+GGG - chr7.3:61711612-61711631 None:intergenic 45.0%
TATGGAAGGGGACAAGAAGA+AGG + chr7.3:61711885-61711904 MS.gene056972:CDS 45.0%
TCCAACTGGGGTGAAGAAAA+TGG + chr7.3:61712386-61712405 MS.gene056972:CDS 45.0%
TCCTCCAATCTATACCACTG+CGG - chr7.3:61711364-61711383 None:intergenic 45.0%
TCCTCCACACTCAAAATCAG+TGG - chr7.3:61711739-61711758 None:intergenic 45.0%
TCTTCGCATACTCCACATGT+GGG - chr7.3:61712634-61712653 None:intergenic 45.0%
TGCCACTCAATTTCTTCAGG+AGG + chr7.3:61713225-61713244 MS.gene056972:CDS 45.0%
TTCTTCGCATACTCCACATG+TGG - chr7.3:61712635-61712654 None:intergenic 45.0%
! ATGTCAGAAGGTCTTGTGGT+TGG - chr7.3:61712954-61712973 None:intergenic 45.0%
! CTGTGCCACTCAATTTCTTC+AGG + chr7.3:61713222-61713241 MS.gene056972:CDS 45.0%
! GATAACTGTCACTTGCACCA+TGG + chr7.3:61712249-61712268 MS.gene056972:CDS 45.0%
!! GATCGTCTTAGAAGTATCGC+CGG + chr7.3:61712990-61713009 MS.gene056972:CDS 45.0%
!! GGAGGTAGTGGAATATATGC+TGG + chr7.3:61712599-61712618 MS.gene056972:CDS 45.0%
!! TTCCCTTACAGATGATGGAC+CGG + chr7.3:61711803-61711822 MS.gene056972:CDS 45.0%
!!! AGAATCATGGGGGTTTTGAG+TGG + chr7.3:61712672-61712691 MS.gene056972:CDS 45.0%
AAAGAGACCAAACCCCACCT+TGG + chr7.3:61710983-61711002 MS.gene056972:CDS 50.0%
ACTACCTCCTTTCTCAGTGG+CGG - chr7.3:61712588-61712607 None:intergenic 50.0%
AGAGACCTTACCACCAAGGT+GGG - chr7.3:61710999-61711018 None:intergenic 50.0%
ATCTTTCGCAGGTAGCTCCT+TGG - chr7.3:61711092-61711111 None:intergenic 50.0%
ATGAGGGTCTGTCTAGAAGG+TGG + chr7.3:61711934-61711953 MS.gene056972:CDS 50.0%
CAAGACCTTCTGACATCGTG+AGG + chr7.3:61712958-61712977 MS.gene056972:CDS 50.0%
CAAGTTGTGGCTCTTCTCAC+TGG + chr7.3:61713155-61713174 MS.gene056972:CDS 50.0%
CACGATGTCAGAAGGTCTTG+TGG - chr7.3:61712958-61712977 None:intergenic 50.0%
CAGCTGTGGAAGTCGAGTAT+TGG + chr7.3:61712015-61712034 MS.gene056972:CDS 50.0%
CAGGTTTGTGATCGAGTCTC+CGG - chr7.3:61711825-61711844 None:intergenic 50.0%
CAGTAGTGATCTTCGCCCAA+CGG + chr7.3:61711987-61712006 MS.gene056972:CDS 50.0%
CAGTCTCGAGTGTGGAAAGA+CGG - chr7.3:61712326-61712345 None:intergenic 50.0%
CGGTGCAAAGCTATCGATGA+TGG - chr7.3:61712163-61712182 None:intergenic 50.0%
CTATCAGGAGGAACCCTCTT+CGG - chr7.3:61711331-61711350 None:intergenic 50.0%
CTCCGGTCCATCATCTGTAA+GGG - chr7.3:61711808-61711827 None:intergenic 50.0%
CTTCTTCTCGAAATGCCTCG+TGG - chr7.3:61711170-61711189 None:intergenic 50.0%
GAAGGATCGGATTCAGGCTT+CGG + chr7.3:61711225-61711244 MS.gene056972:CDS 50.0%
GATTCAGGCTTCGGTTCTTG+AGG + chr7.3:61711234-61711253 MS.gene056972:CDS 50.0%
GGAAGCTTGTGACGAAACCT+TGG - chr7.3:61713200-61713219 None:intergenic 50.0%
GGACTAGAATCTCTCAGAGC+AGG + chr7.3:61711653-61711672 MS.gene056972:CDS 50.0%
GGACTTGCAACCGTCTGATA+AGG + chr7.3:61711579-61711598 MS.gene056972:CDS 50.0%
GGTACTATAGATGGAGGCCA+AGG + chr7.3:61712847-61712866 MS.gene056972:CDS 50.0%
GGTTAATGTGATCGAGGCAC+AGG + chr7.3:61711558-61711577 MS.gene056972:CDS 50.0%
TAGGGTTGCGCCTAACAAAG+AGG + chr7.3:61711759-61711778 MS.gene056972:CDS 50.0%
TCCACTACCTCCTTTCTCAG+TGG - chr7.3:61712591-61712610 None:intergenic 50.0%
TCGAGCTGGCTGACTGTTAA+TGG - chr7.3:61712510-61712529 None:intergenic 50.0%
TCTCCGGTCCATCATCTGTA+AGG - chr7.3:61711809-61711828 None:intergenic 50.0%
TGATAAGGGAAGATTCCCGG+AGG + chr7.3:61711594-61711613 MS.gene056972:CDS 50.0%
TGTTAGGGTTGTGAAGGCCA+AGG + chr7.3:61711072-61711091 MS.gene056972:CDS 50.0%
! AACTGTCACTTGCACCATGG+TGG + chr7.3:61712252-61712271 MS.gene056972:CDS 50.0%
! AGCTGATGAAGCGTTTCCTG+AGG + chr7.3:61711441-61711460 MS.gene056972:CDS 50.0%
! ATCTAGTTCGTCAGGGTGTG+CGG - chr7.3:61712913-61712932 None:intergenic 50.0%
! CCCATTTTCTTCACCCCAGT+TGG - chr7.3:61712390-61712409 None:intergenic 50.0%
! CTGATGCTGGCTGTTTGGAT+GGG + chr7.3:61711412-61711431 MS.gene056972:CDS 50.0%
! TCATCGATAGCTTTGCACCG+AGG + chr7.3:61712163-61712182 MS.gene056972:CDS 50.0%
!! GCAGGAGTATCAATCCGATG+TGG + chr7.3:61711671-61711690 MS.gene056972:CDS 50.0%
!! GTCTTAGAAGTATCGCCGGT+AGG + chr7.3:61712994-61713013 MS.gene056972:CDS 50.0%
!!! GCCACTGATTTTGAGTGTGG+AGG + chr7.3:61711735-61711754 MS.gene056972:CDS 50.0%
!!! GGAGCCACTGATTTTGAGTG+TGG + chr7.3:61711732-61711751 MS.gene056972:CDS 50.0%
AGACGTGTGTCCATGTGAGG+TGG - chr7.3:61712876-61712895 None:intergenic 55.0%
AGGGTGTGCGGAATCAGCAT+GGG - chr7.3:61712901-61712920 None:intergenic 55.0%
CAGAGACCTTACCACCAAGG+TGG - chr7.3:61711000-61711019 None:intergenic 55.0%
CGCATCCTCACGATGTCAGA+AGG - chr7.3:61712966-61712985 None:intergenic 55.0%
CTCAGCACGGCTAAGTCTCA+TGG - chr7.3:61712565-61712584 None:intergenic 55.0%
CTCCAGAGACCTTACCACCA+AGG - chr7.3:61711003-61711022 None:intergenic 55.0%
CTCCAGGCTTATCACCACCA+TGG - chr7.3:61712269-61712288 None:intergenic 55.0%
CTTACCACCAAGGTGGGGTT+TGG - chr7.3:61710993-61711012 None:intergenic 55.0%
GACGTGTGTCCATGTGAGGT+GGG - chr7.3:61712875-61712894 None:intergenic 55.0%
GACTCGATCAGTCTCGAGTG+TGG - chr7.3:61712334-61712353 None:intergenic 55.0%
GACTGCAGTCTTTGCTCAGC+TGG + chr7.3:61713057-61713076 MS.gene056972:CDS 55.0%
GAGACCTTACCACCAAGGTG+GGG - chr7.3:61710998-61711017 None:intergenic 55.0%
GAGAGACGTGTGTCCATGTG+AGG - chr7.3:61712879-61712898 None:intergenic 55.0%
GCCACTGAGAAAGGAGGTAG+TGG + chr7.3:61712587-61712606 MS.gene056972:CDS 55.0%
GCCGCAGTGGTATAGATTGG+AGG + chr7.3:61711360-61711379 MS.gene056972:CDS 55.0%
GGTTCCTCCTGATAGTCCTC+TGG + chr7.3:61711336-61711355 MS.gene056972:CDS 55.0%
TGTGGCTGCAGAACCGTTTG+AGG + chr7.3:61711711-61711730 MS.gene056972:CDS 55.0%
! ATGAAGCGTTTCCTGAGGCG+TGG + chr7.3:61711446-61711465 MS.gene056972:CDS 55.0%
! CAAACCCCACCTTGGTGGTA+AGG + chr7.3:61710991-61711010 MS.gene056972:CDS 55.0%
! CACCATGGTGGTGATAAGCC+TGG + chr7.3:61712264-61712283 MS.gene056972:CDS 55.0%
! CACCTTGGTGGTAAGGTCTC+TGG + chr7.3:61710998-61711017 MS.gene056972:CDS 55.0%
! CATGGTGGTGATAAGCCTGG+AGG + chr7.3:61712267-61712286 MS.gene056972:CDS 55.0%
! GCTGATGCTGGCTGTTTGGA+TGG + chr7.3:61711411-61711430 MS.gene056972:CDS 55.0%
! TCCACAGCTGTTTCGCCGTT+GGG - chr7.3:61712005-61712024 None:intergenic 55.0%
! TCGATAGCTTTGCACCGAGG+TGG + chr7.3:61712166-61712185 MS.gene056972:CDS 55.0%
! TTCCACAGCTGTTTCGCCGT+TGG - chr7.3:61712006-61712025 None:intergenic 55.0%
!! TGGATGTCGGTTCCCACATG+TGG + chr7.3:61712619-61712638 MS.gene056972:CDS 55.0%
CAGGGTGTGCGGAATCAGCA+TGG - chr7.3:61712902-61712921 None:intergenic 60.0%
GAGACCAAACCCCACCTTGG+TGG + chr7.3:61710986-61711005 MS.gene056972:CDS 60.0%
GATGCCTCAGACTGTCGAGC+TGG - chr7.3:61712524-61712543 None:intergenic 60.0%
GGCGCCGCAGTGGTATAGAT+TGG + chr7.3:61711357-61711376 MS.gene056972:CDS 60.0%
GTCGGGGATTTGGCGACTCA+AGG + chr7.3:61713029-61713048 MS.gene056972:CDS 60.0%
GTTTCCTGAGGCGTGGCACT+CGG + chr7.3:61711453-61711472 MS.gene056972:CDS 60.0%
TCAGCCAGCTCGACAGTCTG+AGG + chr7.3:61712517-61712536 MS.gene056972:CDS 60.0%
TCCATGTGAGGTGGGTGCCT+TGG - chr7.3:61712867-61712886 None:intergenic 60.0%
TGAGCCGCCACTGAGAAAGG+AGG + chr7.3:61712581-61712600 MS.gene056972:CDS 60.0%
TGCTGAGCCGCCACTGAGAA+AGG + chr7.3:61712578-61712597 MS.gene056972:CDS 60.0%
TTCTCAGTGGCGGCTCAGCA+CGG - chr7.3:61712578-61712597 None:intergenic 60.0%
! GGGAGCTGATGCTGGCTGTT+TGG + chr7.3:61711407-61711426 MS.gene056972:CDS 60.0%
ATAGTCCTCTGGCGCCGCAG+TGG + chr7.3:61711347-61711366 MS.gene056972:CDS 65.0%
CTATACCACTGCGGCGCCAG+AGG - chr7.3:61711355-61711374 None:intergenic 65.0%
GCCCAACGGCGAAACAGCTG+TGG + chr7.3:61712001-61712020 MS.gene056972:CDS 65.0%
GGCGCCAGAGGACTATCAGG+AGG - chr7.3:61711343-61711362 None:intergenic 65.0%
GGTGAGAGGGGAGCTGATGC+TGG + chr7.3:61711399-61711418 MS.gene056972:CDS 65.0%
TCGGATGCGGCGACGGTTAG+TGG + chr7.3:61711472-61711491 MS.gene056972:CDS 65.0%
TGAGGCGTGGCACTCGGATG+CGG + chr7.3:61711459-61711478 MS.gene056972:CDS 65.0%
TGCGGCGCCAGAGGACTATC+AGG - chr7.3:61711346-61711365 None:intergenic 65.0%
! GCCAAGGCACCCACCTCACA+TGG + chr7.3:61712863-61712882 MS.gene056972:CDS 65.0%
GCATCCGAGTGCCACGCCTC+AGG - chr7.3:61711460-61711479 None:intergenic 70.0%
GTGGCACTCGGATGCGGCGA+CGG + chr7.3:61711465-61711484 MS.gene056972:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 61710950 61713277 61710950 ID=MS.gene056972
chr7.3 mRNA 61710950 61713277 61710950 ID=MS.gene056972.t1;Parent=MS.gene056972
chr7.3 exon 61710950 61713277 61710950 ID=MS.gene056972.t1.exon1;Parent=MS.gene056972.t1
chr7.3 CDS 61710950 61713277 61710950 ID=cds.MS.gene056972.t1;Parent=MS.gene056972.t1
Gene Sequence

>MS.gene056972

ATGCAGAGGCCTCCTCCAGAAGATTTTCTGTTGAAAGAGACCAAACCCCACCTTGGTGGTAAGGTCTCTGGAGACAAGCTTACAAGTACCTATGACCTTGTTGAGCAAATGCAGTATCTTTATGTTAGGGTTGTGAAGGCCAAGGAGCTACCTGCGAAAGATGTTACTGGAAGTTGTGACCCTTATGTTGAAGTCAAGCTTGGTAATTACAAAGGAACCACGAGGCATTTCGAGAAGAAGACTAATCCTGAATGGAATCAGGTTTTTGCTTTTTCGAAGGATCGGATTCAGGCTTCGGTTCTTGAGGTTTTTGTGAAAGATAAGGATTTTGTGAAGGATGATTTTATCGGTCGTGTTTGGTTTGATCTCAATGAGATTCCGAAGAGGGTTCCTCCTGATAGTCCTCTGGCGCCGCAGTGGTATAGATTGGAGGATAGGAAGAGTGATAAGGTGAGAGGGGAGCTGATGCTGGCTGTTTGGATGGGTACTCAAGCTGATGAAGCGTTTCCTGAGGCGTGGCACTCGGATGCGGCGACGGTTAGTGGTACTGATGCTCTTGCAAATATTAGGTCGAAGGTGTATCTATCTCCTAAGCTTTGGTATTTGAGGGTTAATGTGATCGAGGCACAGGACTTGCAACCGTCTGATAAGGGAAGATTCCCGGAGGTTTATGTGAAGGCTATTTTGGGAAATCAGACCTTGAGGACTAGAATCTCTCAGAGCAGGAGTATCAATCCGATGTGGAATGAGGATTTGATGTTTGTGGCTGCAGAACCGTTTGAGGAGCCACTGATTTTGAGTGTGGAGGATAGGGTTGCGCCTAACAAAGAGGAACTGCTAGGGAAGTGTGTTATTCCCTTACAGATGATGGACCGGAGACTCGATCACAAACCTGTGAACACTAGATGGTTCAATATTGAAAAGCATGTTGTTATTATGGAAGGGGACAAGAAGAAGGAAATCAAGTTTGCAAGCAGGATTCATATGAGGGTCTGTCTAGAAGGTGGTTATCATGTTTTGGATGAATCAACTCACTACAGTAGTGATCTTCGCCCAACGGCGAAACAGCTGTGGAAGTCGAGTATTGGAGTTTTGGAAGTGGGGATATTGAATGCTTCGGGTTTGATGCCGATGAAATCAAATAATGGGAGGGGGACTACCGATGCTTACTGTGTAGCAAAGTATGGACAGAAATGGGTGCGTACAAGAACCATCATCGATAGCTTTGCACCGAGGTGGAATGAGCAGTATACTTGGGAGGTTTTTGATCCGTGCACTGTCATTACAATTGGCGTATTCGATAACTGTCACTTGCACCATGGTGGTGATAAGCCTGGAGGACAAAGAGATTCAAAAATCGGCAAAGTAAGAATCCGTCTTTCCACACTCGAGACTGATCGAGTCTACACACATTCCTATCCGCTTCTAGTTCTTCATCCAACTGGGGTGAAGAAAATGGGAGAAATTCAACTGGCTGTAAGGTTTACTTGCTCTTCTTTGCTTAACATGATGCACATGTATTCAAATCCATTGCTGCCCAAGATGCATTACATTCATCCATTAACAGTCAGCCAGCTCGACAGTCTGAGGCATCAAGCTACTCAGATTGTTTCCATGAGACTTAGCCGTGCTGAGCCGCCACTGAGAAAGGAGGTAGTGGAATATATGCTGGATGTCGGTTCCCACATGTGGAGTATGCGAAGAAGCAAAGCCAATTTTTTCAGAATCATGGGGGTTTTGAGTGGATTAATTGCTGTTGGAAAGTGGTTTGACCAAATCTGCAATTGGAAAAACCCTATCACAACAGTTCTGATTCATATTTTATTTATAATACTTGTCATGTACCCTGAACTTATCTTACCAACAATTTTCCTTTACCTCTTTTTGATTGGAGTTTGGTACTATAGATGGAGGCCAAGGCACCCACCTCACATGGACACACGTCTCTCCCATGCTGATTCCGCACACCCTGACGAACTAGATGAAGAGTTCGACACATTTCCAACCACAAGACCTTCTGACATCGTGAGGATGCGATATGATCGTCTTAGAAGTATCGCCGGTAGGATACAAACTGTTGTCGGGGATTTGGCGACTCAAGGCGAAAGACTGCAGTCTTTGCTCAGCTGGAGAGATCCAAGAGCTACTGCACTTTTTGTGCTATTCTGTTTGATTGCTGCTATTGTACTTTATGTGACTCCATTTCAAGTTGTGGCTCTTCTCACTGGAATTTATGTGTTGAGACATCCAAGGTTTCGTCACAAGCTTCCTTCTGTGCCACTCAATTTCTTCAGGAGGTTGCCTGCAAGAACTGATTGCATGCTCTGA
Protein sequence

>MS.gene056972.t1

MQRPPPEDFLLKETKPHLGGKVSGDKLTSTYDLVEQMQYLYVRVVKAKELPAKDVTGSCDPYVEVKLGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQASVLEVFVKDKDFVKDDFIGRVWFDLNEIPKRVPPDSPLAPQWYRLEDRKSDKVRGELMLAVWMGTQADEAFPEAWHSDAATVSGTDALANIRSKVYLSPKLWYLRVNVIEAQDLQPSDKGRFPEVYVKAILGNQTLRTRISQSRSINPMWNEDLMFVAAEPFEEPLILSVEDRVAPNKEELLGKCVIPLQMMDRRLDHKPVNTRWFNIEKHVVIMEGDKKKEIKFASRIHMRVCLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLEVGILNASGLMPMKSNNGRGTTDAYCVAKYGQKWVRTRTIIDSFAPRWNEQYTWEVFDPCTVITIGVFDNCHLHHGGDKPGGQRDSKIGKVRIRLSTLETDRVYTHSYPLLVLHPTGVKKMGEIQLAVRFTCSSLLNMMHMYSNPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLSRAEPPLRKEVVEYMLDVGSHMWSMRRSKANFFRIMGVLSGLIAVGKWFDQICNWKNPITTVLIHILFIILVMYPELILPTIFLYLFLIGVWYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTTRPSDIVRMRYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVLFCLIAAIVLYVTPFQVVALLTGIYVLRHPRFRHKLPSVPLNFFRRLPARTDCML