Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68981.t1 | 6NIB_A | 98.5 | 260 | 4 | 0 | 29 | 288 | 108 | 367 | 2.60E-154 | 554.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68981.t1 | Q8GWW7 | 75.8 | 264 | 64 | 0 | 24 | 287 | 110 | 373 | 7.6e-123 | 441.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68981.t1 | G7JT50 | 98.5 | 260 | 4 | 0 | 29 | 288 | 115 | 374 | 1.8e-154 | 554.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050670 | MS.gene68981 | 0.802857 | 4.60E-49 | -1.69E-46 |
MS.gene051525 | MS.gene68981 | 0.82376 | 1.16E-53 | -1.69E-46 |
MS.gene051588 | MS.gene68981 | 0.807411 | 5.12E-50 | -1.69E-46 |
MS.gene053169 | MS.gene68981 | 0.815046 | 1.13E-51 | -1.69E-46 |
MS.gene054183 | MS.gene68981 | 0.801884 | 7.29E-49 | -1.69E-46 |
MS.gene054556 | MS.gene68981 | 0.805515 | 1.29E-49 | -1.69E-46 |
MS.gene054920 | MS.gene68981 | 0.826683 | 2.37E-54 | -1.69E-46 |
MS.gene056514 | MS.gene68981 | 0.814825 | 1.26E-51 | -1.69E-46 |
MS.gene057476 | MS.gene68981 | 0.814246 | 1.70E-51 | -1.69E-46 |
MS.gene058529 | MS.gene68981 | 0.807521 | 4.85E-50 | -1.69E-46 |
MS.gene058700 | MS.gene68981 | 0.815671 | 8.20E-52 | -1.69E-46 |
MS.gene059082 | MS.gene68981 | 0.80165 | 8.15E-49 | -1.69E-46 |
MS.gene059420 | MS.gene68981 | 0.814752 | 1.31E-51 | -1.69E-46 |
MS.gene059462 | MS.gene68981 | 0.808781 | 2.62E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68981.t1 | MTR_4g112810 | 98.462 | 260 | 4 | 0 | 29 | 288 | 115 | 374 | 0.0 | 538 |
MS.gene68981.t1 | MTR_4g110140 | 54.982 | 271 | 76 | 4 | 29 | 266 | 116 | 373 | 4.06e-88 | 269 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68981.t1 | AT5G08170 | 75.758 | 264 | 64 | 0 | 24 | 287 | 26 | 289 | 8.56e-153 | 429 |
MS.gene68981.t1 | AT5G08170 | 75.758 | 264 | 64 | 0 | 24 | 287 | 26 | 289 | 8.56e-153 | 429 |
MS.gene68981.t1 | AT5G08170 | 75.758 | 264 | 64 | 0 | 24 | 287 | 26 | 289 | 8.56e-153 | 429 |
MS.gene68981.t1 | AT5G08170 | 75.758 | 264 | 64 | 0 | 24 | 287 | 104 | 367 | 1.35e-152 | 431 |
MS.gene68981.t1 | AT5G08170 | 73.818 | 275 | 70 | 1 | 13 | 287 | 101 | 373 | 2.01e-151 | 429 |
Find 71 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTATCATTGCTCCACAATT+TGG | 0.199735 | 8.1:+15313738 | MS.gene68981:CDS |
CCTTAAGTTCATCCTCTATT+TGG | 0.200717 | 8.1:-15311505 | None:intergenic |
AGATTAGCTCCAACGATTCT+TGG | 0.296878 | 8.1:+15310576 | MS.gene68981:CDS |
CATGATCCGGTAGCTGATTC+CGG | 0.299009 | 8.1:-15310541 | None:intergenic |
GTTGAGAGAATATTTCTAAA+TGG | 0.323501 | 8.1:-15314414 | None:intergenic |
TGGTTGCCTCATGGATTATA+TGG | 0.334289 | 8.1:+15311554 | MS.gene68981:CDS |
TTGGAGTTAGGAAGGTTATA+TGG | 0.342843 | 8.1:+15311534 | MS.gene68981:CDS |
TTGTGGGAATTGAAGGTTCC+AGG | 0.350594 | 8.1:+15314339 | MS.gene68981:CDS |
TTAAGGCATATCTTGGAGTT+AGG | 0.360625 | 8.1:+15311522 | MS.gene68981:CDS |
TGACTGGACTTTCAATAGTT+GGG | 0.371650 | 8.1:+15310774 | MS.gene68981:CDS |
GGAGCCAAGCCAAGGCTTCC+TGG | 0.371687 | 8.1:+15313669 | MS.gene68981:CDS |
TCTTTCTCAGTCATGTATAA+TGG | 0.381846 | 8.1:-15312653 | None:intergenic |
TCCTAGGTTGTGGGAATTGA+AGG | 0.384816 | 8.1:+15314332 | MS.gene68981:intron |
TTGACTGGACTTTCAATAGT+TGG | 0.389120 | 8.1:+15310773 | MS.gene68981:CDS |
TCCCATTCTATGGTGCTTGA+AGG | 0.402654 | 8.1:+15311124 | MS.gene68981:CDS |
GGAAGGTCTTAGACAGAATT+CGG | 0.404780 | 8.1:-15313788 | None:intergenic |
AAGATGGATGTTACTGTGAT+TGG | 0.407228 | 8.1:+15310953 | MS.gene68981:CDS |
CTTGTTCAATAGACACTCTT+CGG | 0.412003 | 8.1:-15311456 | None:intergenic |
CTGGTGTGGTTCTTCTGTCT+TGG | 0.415700 | 8.1:+15312513 | MS.gene68981:CDS |
ACCATAGAATGGGAAAATCT+AGG | 0.420979 | 8.1:-15311115 | None:intergenic |
GATGAACTTAAGGCATATCT+TGG | 0.425040 | 8.1:+15311515 | MS.gene68981:CDS |
CGCCTTCAAGCACCATAGAA+TGG | 0.425702 | 8.1:-15311126 | None:intergenic |
CCAAATAGAGGATGAACTTA+AGG | 0.428188 | 8.1:+15311505 | MS.gene68981:CDS |
GATGCGGAGCATAGGATTGC+GGG | 0.431755 | 8.1:+15310748 | MS.gene68981:intron |
ATGATCCGGTAGCTGATTCC+GGG | 0.431760 | 8.1:-15310540 | None:intergenic |
ATTTGGCTCTTACTCAAATG+TGG | 0.433728 | 8.1:-15311488 | None:intergenic |
CTCAGTCATGTATAATGGAC+CGG | 0.444715 | 8.1:-15312648 | None:intergenic |
GGCGGAAGCATCCATGTAGA+TGG | 0.446962 | 8.1:+15311145 | MS.gene68981:CDS |
GTGATCAAACTCCATGTTCC+CGG | 0.448519 | 8.1:+15312629 | MS.gene68981:CDS |
TCAAGTATAACTGATGCTAA+TGG | 0.454381 | 8.1:+15312593 | MS.gene68981:CDS |
AGAGAATATTTCTAAATGGC+TGG | 0.455579 | 8.1:-15314410 | None:intergenic |
AAATGTTTAGGTTTAGAAGA+TGG | 0.456598 | 8.1:+15310937 | MS.gene68981:intron |
GCCTTCAAGCACCATAGAAT+GGG | 0.457536 | 8.1:-15311125 | None:intergenic |
AGTGTCTATTGAACAAGAAC+AGG | 0.457681 | 8.1:+15311462 | MS.gene68981:CDS |
TTTGGCTCTTACTCAAATGT+GGG | 0.487275 | 8.1:-15311487 | None:intergenic |
ATTATACATGACTGAGAAAG+AGG | 0.489453 | 8.1:+15312655 | MS.gene68981:CDS |
ATAGGATTGCGGGAATTGAC+TGG | 0.492124 | 8.1:+15310758 | MS.gene68981:intron |
TGTATAATGGACCGGGAACA+TGG | 0.510017 | 8.1:-15312640 | None:intergenic |
AGTACCAGGAAGCCTTGGCT+TGG | 0.515607 | 8.1:-15313673 | None:intergenic |
GGCATATCTTGGAGTTAGGA+AGG | 0.517285 | 8.1:+15311526 | MS.gene68981:CDS |
TCAACGACTCTAACATGATC+CGG | 0.518148 | 8.1:-15310554 | None:intergenic |
ATGACTGAGAAAGAGGCTGC+TGG | 0.520293 | 8.1:+15312662 | MS.gene68981:CDS |
ACCTGACAAAACAATCTCCC+TGG | 0.521534 | 8.1:-15314357 | None:intergenic |
TGACTGAGAAAGAGGCTGCT+GGG | 0.523464 | 8.1:+15312663 | MS.gene68981:CDS |
AGTCTAGTACCAGGAAGCCT+TGG | 0.524063 | 8.1:-15313678 | None:intergenic |
GACTGGACTTTCAATAGTTG+GGG | 0.526517 | 8.1:+15310775 | MS.gene68981:CDS |
GTCACGAAACCAAGAATCGT+TGG | 0.536081 | 8.1:-15310585 | None:intergenic |
GACTGAGAAAGAGGCTGCTG+GGG | 0.537133 | 8.1:+15312664 | MS.gene68981:CDS |
AAGGTTATATGGTTGCCTCA+TGG | 0.541390 | 8.1:+15311545 | MS.gene68981:CDS |
TTTGAGTAAGAGCCAAATAG+AGG | 0.541729 | 8.1:+15311493 | MS.gene68981:CDS |
ACAGGAGATGATGATACAAA+TGG | 0.542165 | 8.1:+15312458 | MS.gene68981:intron |
GATTCTTGGTTTCGTGACAT+TGG | 0.542389 | 8.1:+15310590 | MS.gene68981:CDS |
TGCAATGTAAAAGTTTACAT+AGG | 0.549734 | 8.1:-15313709 | None:intergenic |
TTTGTTGATTCCTAGGTTGT+GGG | 0.556323 | 8.1:+15314323 | MS.gene68981:intron |
AAAATACTCACTTCATGATG+AGG | 0.559236 | 8.1:-15313810 | None:intergenic |
TCTCACCTTCTCCATCTACA+TGG | 0.576000 | 8.1:-15311156 | None:intergenic |
TCTTCAGATCTTTCATACTG+AGG | 0.576852 | 8.1:-15312554 | None:intergenic |
TGTGGGAATTGAAGGTTCCA+GGG | 0.582236 | 8.1:+15314340 | MS.gene68981:CDS |
CATTCTATGGTGCTTGAAGG+CGG | 0.592030 | 8.1:+15311127 | MS.gene68981:CDS |
GAATGCCCGGAATCAGCTAC+CGG | 0.593981 | 8.1:+15310535 | None:intergenic |
AAATACTCACTTCATGATGA+GGG | 0.594366 | 8.1:-15313809 | None:intergenic |
GAAGCAGCAAGTCTAGTACC+AGG | 0.605026 | 8.1:-15313687 | None:intergenic |
CAAGACAGAAGAACCACACC+AGG | 0.606639 | 8.1:-15312512 | None:intergenic |
AGGATGATGGAGCCAAGCCA+AGG | 0.607977 | 8.1:+15313661 | MS.gene68981:intron |
TGGACTTTCAATAGTTGGGG+AGG | 0.614804 | 8.1:+15310778 | MS.gene68981:CDS |
AGCATCCATGTAGATGGAGA+AGG | 0.617041 | 8.1:+15311151 | MS.gene68981:CDS |
TCAGTCATGTATAATGGACC+GGG | 0.622248 | 8.1:-15312647 | None:intergenic |
ACTCACTTCATGATGAGGGA+AGG | 0.632244 | 8.1:-15313805 | None:intergenic |
TGATGCGGAGCATAGGATTG+CGG | 0.633163 | 8.1:+15310747 | MS.gene68981:intron |
GTTCAATAGACACTCTTCGG+TGG | 0.670209 | 8.1:-15311453 | None:intergenic |
TACATACCATATAATCCATG+AGG | 0.692612 | 8.1:-15311560 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTTAATTTATTTTTTT+TGG | + | chr8.1:15313827-15313846 | MS.gene68981:intron | 0.0% |
!! | ATAAATTAGATTTAGATATT+GGG | + | chr8.1:15313372-15313391 | MS.gene68981:intron | 10.0% |
!! | ATCTATAAAATCATGATAAA+TGG | - | chr8.1:15311675-15311694 | None:intergenic | 15.0% |
!! | CATAAATTAGATTTAGATAT+TGG | + | chr8.1:15313371-15313390 | MS.gene68981:intron | 15.0% |
!! | TTCATGAAAAAATTACATTT+AGG | - | chr8.1:15311245-15311264 | None:intergenic | 15.0% |
!!! | TCTACAATAATTTGATAATT+AGG | + | chr8.1:15313179-15313198 | MS.gene68981:intron | 15.0% |
!!! | TTGAGTTTTATAAAATGTTT+AGG | + | chr8.1:15310925-15310944 | MS.gene68981:intron | 15.0% |
!! | AAAAAGAAAGAAACACAATT+TGG | - | chr8.1:15312706-15312725 | None:intergenic | 20.0% |
!! | AGCAATAATATCAATTCATA+GGG | - | chr8.1:15311618-15311637 | None:intergenic | 20.0% |
!! | ATACTTCTTAATAACAACAT+AGG | - | chr8.1:15312428-15312447 | None:intergenic | 20.0% |
!! | ATGAAAAAATTACATTTAGG+TGG | - | chr8.1:15311242-15311261 | None:intergenic | 20.0% |
!! | CATTAAGAGTTAAATATAAC+TGG | - | chr8.1:15312729-15312748 | None:intergenic | 20.0% |
!! | GTAGAATAAAAATACAATTG+AGG | - | chr8.1:15312093-15312112 | None:intergenic | 20.0% |
!! | TCAATTTGAAGACTAATTAA+TGG | + | chr8.1:15310841-15310860 | MS.gene68981:intron | 20.0% |
!! | TTGAATTGATTATTATGTCT+TGG | + | chr8.1:15310883-15310902 | MS.gene68981:intron | 20.0% |
!! | TTTAAATTGAACACTGTAAA+AGG | + | chr8.1:15313345-15313364 | MS.gene68981:intron | 20.0% |
!! | TTTATTCTACAAATTGAATC+AGG | + | chr8.1:15312103-15312122 | MS.gene68981:intron | 20.0% |
!!! | ATGTAATTTTTTCATGAATG+AGG | + | chr8.1:15311247-15311266 | MS.gene68981:intron | 20.0% |
! | AAAATCTACCAAACATGTAT+TGG | - | chr8.1:15311079-15311098 | None:intergenic | 25.0% |
! | AATAAGTATTTACCATGAAC+TGG | - | chr8.1:15311808-15311827 | None:intergenic | 25.0% |
! | ACAATTTGGAGATAAAAAGT+GGG | + | chr8.1:15313752-15313771 | MS.gene68981:CDS | 25.0% |
! | ATCAATTCAATGAATCACAT+TGG | - | chr8.1:15310873-15310892 | None:intergenic | 25.0% |
! | ATGAATTGATATTATTGCTC+AGG | + | chr8.1:15311619-15311638 | MS.gene68981:intron | 25.0% |
! | ATTTCAAAAGCAATTCAGTA+AGG | - | chr8.1:15311379-15311398 | None:intergenic | 25.0% |
! | ATTTGATGCTTTCAAATGAT+AGG | + | chr8.1:15312883-15312902 | MS.gene68981:intron | 25.0% |
! | GAGCAATAATATCAATTCAT+AGG | - | chr8.1:15311619-15311638 | None:intergenic | 25.0% |
! | GTTTATGAACTGTAACATTT+AGG | + | chr8.1:15314255-15314274 | MS.gene68981:intron | 25.0% |
! | TAGTACTATAATGAAACTAC+TGG | - | chr8.1:15314200-15314219 | None:intergenic | 25.0% |
! | TATAATGAAACTACTGGATT+GGG | - | chr8.1:15314194-15314213 | None:intergenic | 25.0% |
! | TGCAATGTAAAAGTTTACAT+AGG | - | chr8.1:15313712-15313731 | None:intergenic | 25.0% |
! | TTAAAACGAAGTTTAAGCAT+TGG | + | chr8.1:15312917-15312936 | MS.gene68981:intron | 25.0% |
!! | AAATGTTTAGGTTTAGAAGA+TGG | + | chr8.1:15310937-15310956 | MS.gene68981:intron | 25.0% |
!! | AATACATGTTTGGTAGATTT+TGG | + | chr8.1:15311078-15311097 | MS.gene68981:intron | 25.0% |
!! | GGTGTAATTCTATATTTTTC+AGG | + | chr8.1:15313641-15313660 | MS.gene68981:intron | 25.0% |
!! | GTAAACTTTTACATTGCAAA+TGG | + | chr8.1:15313714-15313733 | MS.gene68981:CDS | 25.0% |
!! | TCATATTGATTATCACAGAA+TGG | + | chr8.1:15311957-15311976 | MS.gene68981:intron | 25.0% |
!! | TTTTTCATATAATGAGTTGC+AGG | - | chr8.1:15313491-15313510 | None:intergenic | 25.0% |
!!! | ACTGAATATTTGTTTTTGGT+TGG | + | chr8.1:15313045-15313064 | MS.gene68981:intron | 25.0% |
!!! | ACTTCGTTTTAACCAATATA+AGG | - | chr8.1:15312909-15312928 | None:intergenic | 25.0% |
!!! | AGAAGTATGTTGTTTTATAC+AGG | + | chr8.1:15312440-15312459 | MS.gene68981:intron | 25.0% |
!!! | AGAGACTGAATATTTGTTTT+TGG | + | chr8.1:15313041-15313060 | MS.gene68981:intron | 25.0% |
!!! | TAGTTGCATTTTTCAAGTAT+TGG | + | chr8.1:15313074-15313093 | MS.gene68981:intron | 25.0% |
!!! | TATAATGTTTGTTGATTCCT+AGG | + | chr8.1:15314316-15314335 | MS.gene68981:intron | 25.0% |
!!! | TTCTATATTTTTCAGGATGA+TGG | + | chr8.1:15313648-15313667 | MS.gene68981:intron | 25.0% |
!!! | TTCTTACAACTTTTTCTTTG+AGG | + | chr8.1:15312164-15312183 | MS.gene68981:intron | 25.0% |
!!! | TTTTAGAGTGAAACAAAGTA+TGG | + | chr8.1:15311995-15312014 | MS.gene68981:intron | 25.0% |
AAAATACTCACTTCATGATG+AGG | - | chr8.1:15313813-15313832 | None:intergenic | 30.0% | |
AAATACTCACTTCATGATGA+GGG | - | chr8.1:15313812-15313831 | None:intergenic | 30.0% | |
AAGGATATCTAAGTTTCAAG+CGG | - | chr8.1:15311360-15311379 | None:intergenic | 30.0% | |
ACAGAGACACTCTAATAAAT+GGG | + | chr8.1:15312359-15312378 | MS.gene68981:intron | 30.0% | |
ATAAATGGGATACACGATTT+AGG | + | chr8.1:15312373-15312392 | MS.gene68981:intron | 30.0% | |
ATCGCTTATTCATGATGATT+TGG | - | chr8.1:15314131-15314150 | None:intergenic | 30.0% | |
ATCTGAGTAGTAAATGCAAT+AGG | - | chr8.1:15313290-15313309 | None:intergenic | 30.0% | |
ATGTTATTAATACCCAGACT+TGG | - | chr8.1:15312061-15312080 | None:intergenic | 30.0% | |
ATTATACATGACTGAGAAAG+AGG | + | chr8.1:15312655-15312674 | MS.gene68981:CDS | 30.0% | |
ATTGTAGAGATGCAATCATA+GGG | - | chr8.1:15313167-15313186 | None:intergenic | 30.0% | |
CACAATTTGGAGATAAAAAG+TGG | + | chr8.1:15313751-15313770 | MS.gene68981:CDS | 30.0% | |
CTATAATGAAACTACTGGAT+TGG | - | chr8.1:15314195-15314214 | None:intergenic | 30.0% | |
GAGTTAATGCAGTGATTTAT+TGG | + | chr8.1:15311177-15311196 | MS.gene68981:intron | 30.0% | |
GATATTACATCCTATCCTAT+TGG | - | chr8.1:15313241-15313260 | None:intergenic | 30.0% | |
GATTATTATGTCTTGGTTGT+TGG | + | chr8.1:15310890-15310909 | MS.gene68981:intron | 30.0% | |
TACAAATTGAATCAGGAAGT+TGG | + | chr8.1:15312110-15312129 | MS.gene68981:intron | 30.0% | |
TACACAATATAAACCTCTAC+TGG | + | chr8.1:15313611-15313630 | MS.gene68981:intron | 30.0% | |
TACATACCATATAATCCATG+AGG | - | chr8.1:15311563-15311582 | None:intergenic | 30.0% | |
TATCCTATTGGAAACAAAAC+TGG | - | chr8.1:15313229-15313248 | None:intergenic | 30.0% | |
TATTCATTCTTAACCATACC+AGG | - | chr8.1:15313548-15313567 | None:intergenic | 30.0% | |
TATTGTAGAGATGCAATCAT+AGG | - | chr8.1:15313168-15313187 | None:intergenic | 30.0% | |
TCAAGTATAACTGATGCTAA+TGG | + | chr8.1:15312593-15312612 | MS.gene68981:CDS | 30.0% | |
TCTAATAAATATCCCAGCTT+GGG | - | chr8.1:15312332-15312351 | None:intergenic | 30.0% | |
TCTTTCTCAGTCATGTATAA+TGG | - | chr8.1:15312656-15312675 | None:intergenic | 30.0% | |
TGAACTAATTGAGTAAGATC+TGG | - | chr8.1:15311940-15311959 | None:intergenic | 30.0% | |
TGGATGTAGTGTTTCTTTAA+TGG | + | chr8.1:15313094-15313113 | MS.gene68981:intron | 30.0% | |
TGTTAAAAAGAAGGTTAGGT+TGG | + | chr8.1:15310990-15311009 | MS.gene68981:intron | 30.0% | |
TTGTTTAACAGTTTGTAGTG+AGG | + | chr8.1:15310704-15310723 | MS.gene68981:intron | 30.0% | |
! | ACCTAACCTTCTTTTTAACA+AGG | - | chr8.1:15310990-15311009 | None:intergenic | 30.0% |
! | AGTTTTTCTGACCATTTTCA+GGG | + | chr8.1:15310623-15310642 | MS.gene68981:intron | 30.0% |
! | ATACACGATTTAGGTTCAAA+AGG | + | chr8.1:15312382-15312401 | MS.gene68981:intron | 30.0% |
! | TCAAATGATAGGCCTTATAT+TGG | + | chr8.1:15312894-15312913 | MS.gene68981:intron | 30.0% |
! | TTTTCATGAATGAGGATTAG+TGG | + | chr8.1:15311255-15311274 | MS.gene68981:intron | 30.0% |
!! | AGTGTATCTTTGTTTCTGTA+TGG | + | chr8.1:15312804-15312823 | MS.gene68981:intron | 30.0% |
!! | CACTTTTTATCTCCAAATTG+TGG | - | chr8.1:15313753-15313772 | None:intergenic | 30.0% |
!! | CTTATTCATGATGATTTGGT+TGG | - | chr8.1:15314127-15314146 | None:intergenic | 30.0% |
!! | CTTTGTTTCACTCTAAAATG+CGG | - | chr8.1:15311993-15312012 | None:intergenic | 30.0% |
!! | TTTGAAAGCATCAAATCATC+TGG | - | chr8.1:15312879-15312898 | None:intergenic | 30.0% |
!!! | AGTTTTGTTTCCAATAGGAT+AGG | + | chr8.1:15313228-15313247 | MS.gene68981:intron | 30.0% |
!!! | CATTGGTTTTATGTTGACTT+CGG | - | chr8.1:15311740-15311759 | None:intergenic | 30.0% |
!!! | GTATCACTTTTGAGTTGTTT+TGG | + | chr8.1:15314277-15314296 | MS.gene68981:intron | 30.0% |
!!! | TGGCTATTTTTGAGTTAAGA+TGG | - | chr8.1:15312041-15312060 | None:intergenic | 30.0% |
AACATTGAAATCCGATGATG+CGG | + | chr8.1:15310732-15310751 | MS.gene68981:intron | 35.0% | |
AACTCAAAAATAGCCAAGTC+TGG | + | chr8.1:15312045-15312064 | MS.gene68981:intron | 35.0% | |
AAGATGGATGTTACTGTGAT+TGG | + | chr8.1:15310953-15310972 | MS.gene68981:CDS | 35.0% | |
ACAGGAGATGATGATACAAA+TGG | + | chr8.1:15312458-15312477 | MS.gene68981:intron | 35.0% | |
ACCATAGAATGGGAAAATCT+AGG | - | chr8.1:15311118-15311137 | None:intergenic | 35.0% | |
ACTCAAAAATAGCCAAGTCT+GGG | + | chr8.1:15312046-15312065 | MS.gene68981:intron | 35.0% | |
AGATACACTCTGATGGTAAT+AGG | - | chr8.1:15312793-15312812 | None:intergenic | 35.0% | |
AGATTGATTGATACCTGGTA+TGG | + | chr8.1:15313532-15313551 | MS.gene68981:intron | 35.0% | |
AGTGGACAGCAAAAATTCTT+AGG | - | chr8.1:15313004-15313023 | None:intergenic | 35.0% | |
AGTGTCTATTGAACAAGAAC+AGG | + | chr8.1:15311462-15311481 | MS.gene68981:CDS | 35.0% | |
CACAGAGACACTCTAATAAA+TGG | + | chr8.1:15312358-15312377 | MS.gene68981:intron | 35.0% | |
CCAAATAGAGGATGAACTTA+AGG | + | chr8.1:15311505-15311524 | MS.gene68981:CDS | 35.0% | |
CCTTAAGTTCATCCTCTATT+TGG | - | chr8.1:15311508-15311527 | None:intergenic | 35.0% | |
CGAAGTCAACATAAAACCAA+TGG | + | chr8.1:15311738-15311757 | MS.gene68981:intron | 35.0% | |
CTTGTTCAATAGACACTCTT+CGG | - | chr8.1:15311459-15311478 | None:intergenic | 35.0% | |
GAAACAAAGATACACTCTGA+TGG | - | chr8.1:15312800-15312819 | None:intergenic | 35.0% | |
GATGAACTTAAGGCATATCT+TGG | + | chr8.1:15311515-15311534 | MS.gene68981:CDS | 35.0% | |
GTCTAATAAATATCCCAGCT+TGG | - | chr8.1:15312333-15312352 | None:intergenic | 35.0% | |
TAATACATGTTCCTGAAGGA+AGG | - | chr8.1:15311433-15311452 | None:intergenic | 35.0% | |
TAGCAAGATTGATTGATACC+TGG | + | chr8.1:15313527-15313546 | MS.gene68981:intron | 35.0% | |
TCAAAGAATTGCCCTGAAAA+TGG | - | chr8.1:15310637-15310656 | None:intergenic | 35.0% | |
TCTTCAGATCTTTCATACTG+AGG | - | chr8.1:15312557-15312576 | None:intergenic | 35.0% | |
TGACACTACCAATACATGTT+TGG | + | chr8.1:15311068-15311087 | MS.gene68981:intron | 35.0% | |
TGACTGGACTTTCAATAGTT+GGG | + | chr8.1:15310774-15310793 | MS.gene68981:CDS | 35.0% | |
TGATGTTTAATCACAAGAGC+TGG | - | chr8.1:15311215-15311234 | None:intergenic | 35.0% | |
TGGCAAGAGAATAACTTATG+TGG | + | chr8.1:15311879-15311898 | MS.gene68981:intron | 35.0% | |
TGGTTAAATGGTAACCTCAA+AGG | + | chr8.1:15313130-15313149 | MS.gene68981:intron | 35.0% | |
TGTTTCTTTAATGGAGTCTC+TGG | + | chr8.1:15313103-15313122 | MS.gene68981:intron | 35.0% | |
TTAAGGCATATCTTGGAGTT+AGG | + | chr8.1:15311522-15311541 | MS.gene68981:CDS | 35.0% | |
TTATATAGCTGCATCTGCAA+TGG | - | chr8.1:15311773-15311792 | None:intergenic | 35.0% | |
TTCATCTGAATCCTTCAAAG+TGG | - | chr8.1:15313022-15313041 | None:intergenic | 35.0% | |
TTGACTGGACTTTCAATAGT+TGG | + | chr8.1:15310773-15310792 | MS.gene68981:CDS | 35.0% | |
TTGGAGTTAGGAAGGTTATA+TGG | + | chr8.1:15311534-15311553 | MS.gene68981:CDS | 35.0% | |
TTTCCAAGTGATGAAGTTTG+TGG | + | chr8.1:15313987-15314006 | MS.gene68981:intron | 35.0% | |
TTTGAGTAAGAGCCAAATAG+AGG | + | chr8.1:15311493-15311512 | MS.gene68981:CDS | 35.0% | |
! | AATGAGGATTAGTGGCAATT+AGG | + | chr8.1:15311263-15311282 | MS.gene68981:intron | 35.0% |
! | AGTTTAAGATGTCATGTTCG+CGG | + | chr8.1:15312838-15312857 | MS.gene68981:intron | 35.0% |
! | ATTTATTCACGTTCTAGCTG+TGG | + | chr8.1:15311028-15311047 | MS.gene68981:intron | 35.0% |
! | CATTTATTAGAGTGTCTCTG+TGG | - | chr8.1:15312360-15312379 | None:intergenic | 35.0% |
! | GAGTTTTTCTGACCATTTTC+AGG | + | chr8.1:15310622-15310641 | MS.gene68981:intron | 35.0% |
! | GCCTTGTTAAAAAGAAGGTT+AGG | + | chr8.1:15310986-15311005 | MS.gene68981:intron | 35.0% |
! | GGTCTATATAGTTTTCCATG+TGG | - | chr8.1:15312983-15313002 | None:intergenic | 35.0% |
! | TAGCAATTTTTCCTTCCTTC+AGG | + | chr8.1:15311419-15311438 | MS.gene68981:intron | 35.0% |
! | TCCTAGATTTTCCCATTCTA+TGG | + | chr8.1:15311114-15311133 | MS.gene68981:CDS | 35.0% |
!! | ATTTGGCTCTTACTCAAATG+TGG | - | chr8.1:15311491-15311510 | None:intergenic | 35.0% |
!! | ATTTTTGCTGTCCACTTTGA+AGG | + | chr8.1:15313008-15313027 | MS.gene68981:intron | 35.0% |
!! | TTTGGCTCTTACTCAAATGT+GGG | - | chr8.1:15311490-15311509 | None:intergenic | 35.0% |
!! | TTTGTTGATTCCTAGGTTGT+GGG | + | chr8.1:15314323-15314342 | MS.gene68981:intron | 35.0% |
!!! | AAGCCAGTTTTGTTTCCAAT+AGG | + | chr8.1:15313223-15313242 | MS.gene68981:intron | 35.0% |
!!! | ATAACATGTGCTGTTTTGTG+AGG | + | chr8.1:15312489-15312508 | MS.gene68981:CDS | 35.0% |
AAGGTTATATGGTTGCCTCA+TGG | + | chr8.1:15311545-15311564 | MS.gene68981:CDS | 40.0% | |
AAGTTATTCTCTTGCCAGAG+TGG | - | chr8.1:15311876-15311895 | None:intergenic | 40.0% | |
ATGGTCAGAAAAACTCACAG+TGG | - | chr8.1:15310618-15310637 | None:intergenic | 40.0% | |
ATTCAAAGAAGTTCCCAAGC+TGG | + | chr8.1:15312316-15312335 | MS.gene68981:intron | 40.0% | |
CACTAACTACTGCAGTTATG+TGG | + | chr8.1:15313936-15313955 | MS.gene68981:intron | 40.0% | |
CCTGAAGACAAAAGAGTAGA+CGG | - | chr8.1:15311323-15311342 | None:intergenic | 40.0% | |
CGAAACACATATCATTGGAC+GGG | + | chr8.1:15312954-15312973 | MS.gene68981:intron | 40.0% | |
GACTGGACTTTCAATAGTTG+GGG | + | chr8.1:15310775-15310794 | MS.gene68981:CDS | 40.0% | |
GATATTGGGCATGCAATCTT+TGG | + | chr8.1:15313386-15313405 | MS.gene68981:intron | 40.0% | |
GATTCAACACAAGAACAGAC+AGG | - | chr8.1:15311854-15311873 | None:intergenic | 40.0% | |
GATTCTTGGTTTCGTGACAT+TGG | + | chr8.1:15310590-15310609 | MS.gene68981:CDS | 40.0% | |
GCAATGGTTCATTACTCCAT+TGG | - | chr8.1:15311757-15311776 | None:intergenic | 40.0% | |
GCGAAACACATATCATTGGA+CGG | + | chr8.1:15312953-15312972 | MS.gene68981:intron | 40.0% | |
GCTATCACCATGTACTTATG+AGG | + | chr8.1:15311912-15311931 | MS.gene68981:intron | 40.0% | |
GCTATCATTGCTCCACAATT+TGG | + | chr8.1:15313738-15313757 | MS.gene68981:CDS | 40.0% | |
GGAAGGTCTTAGACAGAATT+CGG | - | chr8.1:15313791-15313810 | None:intergenic | 40.0% | |
GTGGTAATACATGTTCCTGA+AGG | - | chr8.1:15311437-15311456 | None:intergenic | 40.0% | |
TAAACCTCTACTGGATGTTC+TGG | + | chr8.1:15313620-15313639 | MS.gene68981:intron | 40.0% | |
TAGTTTGAGCCACAGATCTT+CGG | - | chr8.1:15314013-15314032 | None:intergenic | 40.0% | |
TCAACGACTCTAACATGATC+CGG | - | chr8.1:15310557-15310576 | None:intergenic | 40.0% | |
TGCAGGATAGTCTCATCATT+AGG | - | chr8.1:15313474-15313493 | None:intergenic | 40.0% | |
TGGGAACTTCTTTGAATGTG+TGG | - | chr8.1:15312313-15312332 | None:intergenic | 40.0% | |
TGGTCAGAAAAACTCACAGT+GGG | - | chr8.1:15310617-15310636 | None:intergenic | 40.0% | |
TGTCGCGAAACACATATCAT+TGG | + | chr8.1:15312949-15312968 | MS.gene68981:intron | 40.0% | |
TTCAAAGAAGTTCCCAAGCT+GGG | + | chr8.1:15312317-15312336 | MS.gene68981:intron | 40.0% | |
TTCTTGTGTTGAATCCACTC+TGG | + | chr8.1:15311859-15311878 | MS.gene68981:intron | 40.0% | |
! | AGATTAGCTCCAACGATTCT+TGG | + | chr8.1:15310576-15310595 | MS.gene68981:CDS | 40.0% |
! | GATTTGGTTGGATGAGAACA+TGG | - | chr8.1:15314115-15314134 | None:intergenic | 40.0% |
! | GGTAGATTTTGGATGTTGAG+AGG | + | chr8.1:15311089-15311108 | MS.gene68981:intron | 40.0% |
! | TCTGGAACCTCATAAGTACA+TGG | - | chr8.1:15311922-15311941 | None:intergenic | 40.0% |
! | TGGTTGCCTCATGGATTATA+TGG | + | chr8.1:15311554-15311573 | MS.gene68981:CDS | 40.0% |
!! | CGACAGCCTTGTTAAAAAGA+AGG | + | chr8.1:15310981-15311000 | MS.gene68981:CDS | 40.0% |
!! | CTCAGTCATGTATAATGGAC+CGG | - | chr8.1:15312651-15312670 | None:intergenic | 40.0% |
!! | GTTTGTTGATTCCTAGGTTG+TGG | + | chr8.1:15314322-15314341 | MS.gene68981:intron | 40.0% |
!! | TCAGTCATGTATAATGGACC+GGG | - | chr8.1:15312650-15312669 | None:intergenic | 40.0% |
!! | TTGAATCAGGAAGTTGGTAG+TGG | + | chr8.1:15312116-15312135 | MS.gene68981:intron | 40.0% |
AATCCTATGCTCCGCATCAT+CGG | - | chr8.1:15310746-15310765 | None:intergenic | 45.0% | |
ACCTGACAAAACAATCTCCC+TGG | - | chr8.1:15314360-15314379 | None:intergenic | 45.0% | |
ACCTTCAATTCCCACAACCT+AGG | - | chr8.1:15314336-15314355 | None:intergenic | 45.0% | |
ACTCACTTCATGATGAGGGA+AGG | - | chr8.1:15313808-15313827 | None:intergenic | 45.0% | |
AGCATCCATGTAGATGGAGA+AGG | + | chr8.1:15311151-15311170 | MS.gene68981:CDS | 45.0% | |
ATAGGATTGCGGGAATTGAC+TGG | + | chr8.1:15310758-15310777 | MS.gene68981:intron | 45.0% | |
CAAGTTGCTCAACCAGTTCA+TGG | + | chr8.1:15311793-15311812 | MS.gene68981:intron | 45.0% | |
CATTCTATGGTGCTTGAAGG+CGG | + | chr8.1:15311127-15311146 | MS.gene68981:CDS | 45.0% | |
GAATGCTGGTAGTTAGCAGT+CGG | + | chr8.1:15313408-15313427 | MS.gene68981:intron | 45.0% | |
GCAATCATAGGGTTACCACT+GGG | - | chr8.1:15313156-15313175 | None:intergenic | 45.0% | |
GCCTTCAAGCACCATAGAAT+GGG | - | chr8.1:15311128-15311147 | None:intergenic | 45.0% | |
GCTGAGAGCAAAACAATGAG+AGG | - | chr8.1:15313322-15313341 | None:intergenic | 45.0% | |
GGCATATCTTGGAGTTAGGA+AGG | + | chr8.1:15311526-15311545 | MS.gene68981:CDS | 45.0% | |
GTCACGAAACCAAGAATCGT+TGG | - | chr8.1:15310588-15310607 | None:intergenic | 45.0% | |
GTCTCTGGTGTCTGGTTAAA+TGG | + | chr8.1:15313118-15313137 | MS.gene68981:intron | 45.0% | |
GTGATCAAACTCCATGTTCC+CGG | + | chr8.1:15312629-15312648 | MS.gene68981:CDS | 45.0% | |
GTTCAATAGACACTCTTCGG+TGG | - | chr8.1:15311456-15311475 | None:intergenic | 45.0% | |
TACACCAGAACATCCAGTAG+AGG | - | chr8.1:15313627-15313646 | None:intergenic | 45.0% | |
TCCCATTCTATGGTGCTTGA+AGG | + | chr8.1:15311124-15311143 | MS.gene68981:CDS | 45.0% | |
TCCTAGGTTGTGGGAATTGA+AGG | + | chr8.1:15314332-15314351 | MS.gene68981:intron | 45.0% | |
TCTCACCTTCTCCATCTACA+TGG | - | chr8.1:15311159-15311178 | None:intergenic | 45.0% | |
TGCAATCATAGGGTTACCAC+TGG | - | chr8.1:15313157-15313176 | None:intergenic | 45.0% | |
TGGACTTTCAATAGTTGGGG+AGG | + | chr8.1:15310778-15310797 | MS.gene68981:CDS | 45.0% | |
TGTGGGAATTGAAGGTTCCA+GGG | + | chr8.1:15314340-15314359 | MS.gene68981:CDS | 45.0% | |
TTAATGGAGTCTCTGGTGTC+TGG | + | chr8.1:15313110-15313129 | MS.gene68981:intron | 45.0% | |
TTGGGACATTTGCGAGTTTG+TGG | - | chr8.1:15314176-15314195 | None:intergenic | 45.0% | |
TTGTGGGAATTGAAGGTTCC+AGG | + | chr8.1:15314339-15314358 | MS.gene68981:CDS | 45.0% | |
! | CCGTCTACTCTTTTGTCTTC+AGG | + | chr8.1:15311320-15311339 | MS.gene68981:intron | 45.0% |
! | GTTCGCGGTTTTCTTTTCTG+TGG | + | chr8.1:15312853-15312872 | MS.gene68981:intron | 45.0% |
!! | AGGGAGATTGTTTTGTCAGG+TGG | + | chr8.1:15314359-15314378 | MS.gene68981:CDS | 45.0% |
!! | GCATGCAATCTTTGGAATGC+TGG | + | chr8.1:15313394-15313413 | MS.gene68981:intron | 45.0% |
!! | TCCAGGGAGATTGTTTTGTC+AGG | + | chr8.1:15314356-15314375 | MS.gene68981:CDS | 45.0% |
!! | TGTATAATGGACCGGGAACA+TGG | - | chr8.1:15312643-15312662 | None:intergenic | 45.0% |
!!! | TTATAGATTTTTTTTTTTTT+GGG | + | chr8.1:15311687-15311706 | MS.gene68981:intron | 5.0% |
!!! | TTTATAGATTTTTTTTTTTT+TGG | + | chr8.1:15311686-15311705 | MS.gene68981:intron | 5.0% |
AATCCGATGATGCGGAGCAT+AGG | + | chr8.1:15310740-15310759 | MS.gene68981:intron | 50.0% | |
AGTCTAGTACCAGGAAGCCT+TGG | - | chr8.1:15313681-15313700 | None:intergenic | 50.0% | |
AGTTTGTGGCCGAAGATCTG+TGG | + | chr8.1:15314001-15314020 | MS.gene68981:intron | 50.0% | |
ATGACTGAGAAAGAGGCTGC+TGG | + | chr8.1:15312662-15312681 | MS.gene68981:CDS | 50.0% | |
CAAGACAGAAGAACCACACC+AGG | - | chr8.1:15312515-15312534 | None:intergenic | 50.0% | |
CGCCTTCAAGCACCATAGAA+TGG | - | chr8.1:15311129-15311148 | None:intergenic | 50.0% | |
CGGCCACAAACTTCATCACT+TGG | - | chr8.1:15313993-15314012 | None:intergenic | 50.0% | |
CTGGTGTGGTTCTTCTGTCT+TGG | + | chr8.1:15312513-15312532 | MS.gene68981:CDS | 50.0% | |
GAAGCAGCAAGTCTAGTACC+AGG | - | chr8.1:15313690-15313709 | None:intergenic | 50.0% | |
TCATTGGACGGGATACCACA+TGG | + | chr8.1:15312965-15312984 | MS.gene68981:intron | 50.0% | |
TGACTGAGAAAGAGGCTGCT+GGG | + | chr8.1:15312663-15312682 | MS.gene68981:CDS | 50.0% | |
TGATGCGGAGCATAGGATTG+CGG | + | chr8.1:15310747-15310766 | MS.gene68981:intron | 50.0% | |
! | ATGATCCGGTAGCTGATTCC+GGG | - | chr8.1:15310543-15310562 | None:intergenic | 50.0% |
! | CATGATCCGGTAGCTGATTC+CGG | - | chr8.1:15310544-15310563 | None:intergenic | 50.0% |
!!! | ATGTGCTGTTTTGTGAGGCC+TGG | + | chr8.1:15312494-15312513 | MS.gene68981:CDS | 50.0% |
AGTACCAGGAAGCCTTGGCT+TGG | - | chr8.1:15313676-15313695 | None:intergenic | 55.0% | |
GACTGAGAAAGAGGCTGCTG+GGG | + | chr8.1:15312664-15312683 | MS.gene68981:CDS | 55.0% | |
GATGCGGAGCATAGGATTGC+GGG | + | chr8.1:15310748-15310767 | MS.gene68981:intron | 55.0% | |
TGGTAACCTCAAAGGCCCAG+TGG | + | chr8.1:15313138-15313157 | MS.gene68981:intron | 55.0% | |
! | AGAGGCTGCTGGGGTTTTTC+AGG | + | chr8.1:15312673-15312692 | MS.gene68981:CDS | 55.0% |
! | CTGTTTTGTGAGGCCTGGTG+TGG | + | chr8.1:15312499-15312518 | MS.gene68981:CDS | 55.0% |
!! | AGGATGATGGAGCCAAGCCA+AGG | + | chr8.1:15313661-15313680 | MS.gene68981:intron | 55.0% |
!! | GGCGGAAGCATCCATGTAGA+TGG | + | chr8.1:15311145-15311164 | MS.gene68981:CDS | 55.0% |
GGGTTACCACTGGGCCTTTG+AGG | - | chr8.1:15313147-15313166 | None:intergenic | 60.0% | |
GGAGCCAAGCCAAGGCTTCC+TGG | + | chr8.1:15313669-15313688 | MS.gene68981:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 15310537 | 15314421 | 15310537 | ID=MS.gene68981 |
chr8.1 | mRNA | 15310537 | 15314421 | 15310537 | ID=MS.gene68981.t1;Parent=MS.gene68981 |
chr8.1 | exon | 15310537 | 15310619 | 15310537 | ID=MS.gene68981.t1.exon1;Parent=MS.gene68981.t1 |
chr8.1 | CDS | 15310537 | 15310619 | 15310537 | ID=cds.MS.gene68981.t1;Parent=MS.gene68981.t1 |
chr8.1 | exon | 15310762 | 15310799 | 15310762 | ID=MS.gene68981.t1.exon2;Parent=MS.gene68981.t1 |
chr8.1 | CDS | 15310762 | 15310799 | 15310762 | ID=cds.MS.gene68981.t1;Parent=MS.gene68981.t1 |
chr8.1 | exon | 15310947 | 15311002 | 15310947 | ID=MS.gene68981.t1.exon3;Parent=MS.gene68981.t1 |
chr8.1 | CDS | 15310947 | 15311002 | 15310947 | ID=cds.MS.gene68981.t1;Parent=MS.gene68981.t1 |
chr8.1 | exon | 15311094 | 15311172 | 15311094 | ID=MS.gene68981.t1.exon4;Parent=MS.gene68981.t1 |
chr8.1 | CDS | 15311094 | 15311172 | 15311094 | ID=cds.MS.gene68981.t1;Parent=MS.gene68981.t1 |
chr8.1 | exon | 15311441 | 15311575 | 15311441 | ID=MS.gene68981.t1.exon5;Parent=MS.gene68981.t1 |
chr8.1 | CDS | 15311441 | 15311575 | 15311441 | ID=cds.MS.gene68981.t1;Parent=MS.gene68981.t1 |
chr8.1 | exon | 15312462 | 15312694 | 15312462 | ID=MS.gene68981.t1.exon6;Parent=MS.gene68981.t1 |
chr8.1 | CDS | 15312462 | 15312694 | 15312462 | ID=cds.MS.gene68981.t1;Parent=MS.gene68981.t1 |
chr8.1 | exon | 15313663 | 15313821 | 15313663 | ID=MS.gene68981.t1.exon7;Parent=MS.gene68981.t1 |
chr8.1 | CDS | 15313663 | 15313821 | 15313663 | ID=cds.MS.gene68981.t1;Parent=MS.gene68981.t1 |
chr8.1 | exon | 15314338 | 15314421 | 15314338 | ID=MS.gene68981.t1.exon8;Parent=MS.gene68981.t1 |
chr8.1 | CDS | 15314338 | 15314421 | 15314338 | ID=cds.MS.gene68981.t1;Parent=MS.gene68981.t1 |
Gene Sequence |
Protein sequence |