Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47843.t1 | XP_003597755.2 | 99.1 | 349 | 3 | 0 | 6 | 354 | 81 | 429 | 2.20E-195 | 691.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47843.t1 | Q9FKS8 | 81.1 | 349 | 65 | 1 | 6 | 354 | 67 | 414 | 3.1e-166 | 585.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47843.t1 | G7II25 | 99.1 | 349 | 3 | 0 | 6 | 354 | 81 | 429 | 1.6e-195 | 691.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050477 | MS.gene47843 | 0.803416 | 3.52E-49 | -1.69E-46 |
| MS.gene050545 | MS.gene47843 | 0.801024 | 1.09E-48 | -1.69E-46 |
| MS.gene051525 | MS.gene47843 | 0.800529 | 1.38E-48 | -1.69E-46 |
| MS.gene051588 | MS.gene47843 | 0.83329 | 5.81E-56 | -1.69E-46 |
| MS.gene052414 | MS.gene47843 | 0.820521 | 6.56E-53 | -1.69E-46 |
| MS.gene053169 | MS.gene47843 | 0.825558 | 4.39E-54 | -1.69E-46 |
| MS.gene05383 | MS.gene47843 | 0.803893 | 2.80E-49 | -1.69E-46 |
| MS.gene053873 | MS.gene47843 | 0.850611 | 1.52E-60 | -1.69E-46 |
| MS.gene054183 | MS.gene47843 | 0.800229 | 1.59E-48 | -1.69E-46 |
| MS.gene054920 | MS.gene47843 | 0.840727 | 7.31E-58 | -1.69E-46 |
| MS.gene055369 | MS.gene47843 | 0.805853 | 1.09E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene47843 | 0.820421 | 6.92E-53 | -1.69E-46 |
| MS.gene055744 | MS.gene47843 | 0.823714 | 1.19E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene47843 | 0.856618 | 2.85E-62 | -1.69E-46 |
| MS.gene055911 | MS.gene47843 | 0.861716 | 8.43E-64 | -1.69E-46 |
| MS.gene05601 | MS.gene47843 | 0.822821 | 1.93E-53 | -1.69E-46 |
| MS.gene056040 | MS.gene47843 | 0.802406 | 5.70E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene47843 | 0.821064 | 4.92E-53 | -1.69E-46 |
| MS.gene056346 | MS.gene47843 | 0.802376 | 5.78E-49 | -1.69E-46 |
| MS.gene056514 | MS.gene47843 | 0.869432 | 3.11E-66 | -1.69E-46 |
| MS.gene057019 | MS.gene47843 | 0.816956 | 4.23E-52 | -1.69E-46 |
| MS.gene057321 | MS.gene47843 | -0.843766 | 1.15E-58 | -1.69E-46 |
| MS.gene057476 | MS.gene47843 | 0.821668 | 3.57E-53 | -1.69E-46 |
| MS.gene057605 | MS.gene47843 | -0.807842 | 4.15E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene47843 | 0.801026 | 1.09E-48 | -1.69E-46 |
| MS.gene057888 | MS.gene47843 | 0.822296 | 2.56E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene47843 | 0.82541 | 4.76E-54 | -1.69E-46 |
| MS.gene058120 | MS.gene47843 | 0.804462 | 2.14E-49 | -1.69E-46 |
| MS.gene058529 | MS.gene47843 | 0.805996 | 1.02E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene47843 | 0.832942 | 7.09E-56 | -1.69E-46 |
| MS.gene058948 | MS.gene47843 | 0.810357 | 1.20E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene47843 | 0.820375 | 7.09E-53 | -1.69E-46 |
| MS.gene059462 | MS.gene47843 | 0.813271 | 2.79E-51 | -1.69E-46 |
| MS.gene059868 | MS.gene47843 | 0.832936 | 7.11E-56 | -1.69E-46 |
| MS.gene059870 | MS.gene47843 | 0.80834 | 3.25E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene47843 | 0.815152 | 1.07E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene47843 | 0.834051 | 3.75E-56 | -1.69E-46 |
| MS.gene060485 | MS.gene47843 | 0.808953 | 2.40E-50 | -1.69E-46 |
| MS.gene061214 | MS.gene47843 | 0.832165 | 1.10E-55 | -1.69E-46 |
| MS.gene061215 | MS.gene47843 | 0.827212 | 1.77E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47843.t1 | MTR_2g101920 | 99.140 | 349 | 3 | 0 | 6 | 354 | 81 | 429 | 0.0 | 707 |
| MS.gene47843.t1 | MTR_6g022790 | 78.510 | 349 | 74 | 1 | 6 | 354 | 76 | 423 | 0.0 | 585 |
| MS.gene47843.t1 | MTR_7g038910 | 85.100 | 349 | 51 | 1 | 6 | 354 | 64 | 411 | 0.0 | 577 |
| MS.gene47843.t1 | MTR_7g038910 | 85.015 | 327 | 48 | 1 | 6 | 332 | 64 | 389 | 0.0 | 536 |
| MS.gene47843.t1 | MTR_6g023065 | 77.077 | 349 | 79 | 1 | 6 | 354 | 84 | 431 | 0.0 | 531 |
| MS.gene47843.t1 | MTR_4g103890 | 68.195 | 349 | 110 | 1 | 6 | 354 | 44 | 391 | 0.0 | 521 |
| MS.gene47843.t1 | MTR_6g022780 | 75.714 | 350 | 83 | 2 | 6 | 354 | 48 | 396 | 0.0 | 519 |
| MS.gene47843.t1 | MTR_7g038910 | 84.459 | 296 | 45 | 1 | 6 | 301 | 64 | 358 | 0.0 | 518 |
| MS.gene47843.t1 | MTR_8g080120 | 67.908 | 349 | 111 | 1 | 6 | 354 | 57 | 404 | 0.0 | 510 |
| MS.gene47843.t1 | MTR_6g023075 | 74.000 | 350 | 89 | 2 | 6 | 354 | 48 | 396 | 9.08e-180 | 505 |
| MS.gene47843.t1 | MTR_2g096830 | 74.857 | 350 | 86 | 2 | 6 | 354 | 48 | 396 | 1.71e-172 | 486 |
| MS.gene47843.t1 | MTR_3g085820 | 72.607 | 303 | 82 | 1 | 6 | 308 | 67 | 368 | 2.74e-164 | 464 |
| MS.gene47843.t1 | MTR_5g054730 | 63.218 | 348 | 127 | 1 | 7 | 354 | 61 | 407 | 2.89e-158 | 451 |
| MS.gene47843.t1 | MTR_1g093020 | 62.178 | 349 | 131 | 1 | 6 | 354 | 58 | 405 | 5.76e-155 | 442 |
| MS.gene47843.t1 | MTR_1g093020 | 62.178 | 349 | 131 | 1 | 6 | 354 | 58 | 405 | 1.22e-154 | 442 |
| MS.gene47843.t1 | MTR_2g096830 | 73.401 | 297 | 77 | 2 | 6 | 301 | 48 | 343 | 1.35e-152 | 433 |
| MS.gene47843.t1 | MTR_1g093030 | 60.458 | 349 | 137 | 1 | 6 | 354 | 58 | 405 | 8.73e-151 | 432 |
| MS.gene47843.t1 | MTR_0531s0020 | 74.170 | 271 | 69 | 1 | 6 | 276 | 83 | 352 | 1.33e-140 | 403 |
| MS.gene47843.t1 | MTR_3g005740 | 52.286 | 350 | 164 | 2 | 7 | 353 | 87 | 436 | 1.17e-122 | 361 |
| MS.gene47843.t1 | MTR_5g023240 | 37.989 | 358 | 210 | 5 | 8 | 354 | 122 | 478 | 5.97e-80 | 253 |
| MS.gene47843.t1 | MTR_3g115090 | 38.056 | 360 | 208 | 7 | 8 | 354 | 120 | 477 | 4.28e-79 | 251 |
| MS.gene47843.t1 | MTR_2g012470 | 36.415 | 357 | 216 | 5 | 8 | 354 | 131 | 486 | 1.04e-77 | 248 |
| MS.gene47843.t1 | MTR_5g023260 | 36.769 | 359 | 214 | 6 | 8 | 354 | 143 | 500 | 2.44e-75 | 242 |
| MS.gene47843.t1 | MTR_4g075750 | 35.359 | 362 | 218 | 4 | 8 | 353 | 106 | 467 | 3.14e-72 | 233 |
| MS.gene47843.t1 | MTR_3g110660 | 31.909 | 351 | 202 | 8 | 33 | 350 | 97 | 443 | 3.11e-46 | 164 |
| MS.gene47843.t1 | MTR_1g105980 | 30.052 | 386 | 216 | 11 | 8 | 350 | 58 | 432 | 2.08e-43 | 156 |
| MS.gene47843.t1 | MTR_1g007380 | 30.084 | 359 | 202 | 8 | 31 | 350 | 85 | 433 | 3.73e-41 | 150 |
| MS.gene47843.t1 | MTR_1g492640 | 30.278 | 360 | 229 | 9 | 8 | 353 | 95 | 446 | 1.15e-40 | 149 |
| MS.gene47843.t1 | MTR_1g105990 | 31.186 | 388 | 212 | 14 | 8 | 350 | 57 | 434 | 1.79e-40 | 148 |
| MS.gene47843.t1 | MTR_1g105995 | 29.134 | 381 | 226 | 11 | 8 | 350 | 57 | 431 | 4.71e-40 | 147 |
| MS.gene47843.t1 | MTR_4g055610 | 28.333 | 360 | 236 | 10 | 8 | 353 | 76 | 427 | 1.04e-39 | 146 |
| MS.gene47843.t1 | MTR_8g099320 | 28.926 | 363 | 235 | 9 | 6 | 353 | 61 | 415 | 9.41e-39 | 143 |
| MS.gene47843.t1 | MTR_3g088475 | 28.912 | 377 | 231 | 10 | 6 | 350 | 70 | 441 | 3.83e-38 | 142 |
| MS.gene47843.t1 | MTR_1g106000 | 27.481 | 393 | 226 | 11 | 8 | 350 | 51 | 434 | 5.45e-38 | 142 |
| MS.gene47843.t1 | MTR_3g461480 | 28.871 | 381 | 226 | 10 | 6 | 350 | 63 | 434 | 7.86e-38 | 141 |
| MS.gene47843.t1 | MTR_3g096800 | 29.948 | 384 | 214 | 11 | 8 | 350 | 69 | 438 | 1.07e-36 | 138 |
| MS.gene47843.t1 | MTR_3g088455 | 27.586 | 377 | 235 | 10 | 6 | 350 | 70 | 440 | 5.75e-36 | 136 |
| MS.gene47843.t1 | MTR_3g096830 | 29.260 | 311 | 191 | 6 | 68 | 352 | 124 | 431 | 3.88e-35 | 134 |
| MS.gene47843.t1 | MTR_5g096840 | 29.808 | 312 | 187 | 7 | 68 | 350 | 128 | 436 | 6.39e-35 | 133 |
| MS.gene47843.t1 | MTR_1g492640 | 29.814 | 322 | 206 | 8 | 44 | 353 | 1 | 314 | 1.22e-34 | 130 |
| MS.gene47843.t1 | MTR_3g096840 | 28.947 | 380 | 225 | 11 | 6 | 350 | 75 | 444 | 7.49e-34 | 130 |
| MS.gene47843.t1 | MTR_3g461440 | 26.400 | 375 | 240 | 9 | 8 | 350 | 59 | 429 | 1.41e-33 | 129 |
| MS.gene47843.t1 | MTR_1g070470 | 26.045 | 311 | 214 | 7 | 35 | 338 | 85 | 386 | 2.52e-33 | 128 |
| MS.gene47843.t1 | MTR_4g073520 | 26.234 | 385 | 240 | 9 | 8 | 352 | 95 | 475 | 4.80e-33 | 129 |
| MS.gene47843.t1 | MTR_1g029750 | 28.481 | 316 | 189 | 6 | 68 | 350 | 133 | 444 | 5.01e-33 | 128 |
| MS.gene47843.t1 | MTR_4g073520 | 26.234 | 385 | 240 | 9 | 8 | 352 | 95 | 475 | 5.20e-33 | 129 |
| MS.gene47843.t1 | MTR_3g461470 | 26.596 | 376 | 242 | 9 | 8 | 352 | 59 | 431 | 8.40e-33 | 127 |
| MS.gene47843.t1 | MTR_3g061390 | 27.221 | 349 | 221 | 8 | 31 | 350 | 85 | 429 | 1.15e-31 | 124 |
| MS.gene47843.t1 | MTR_1g007270 | 26.667 | 375 | 238 | 11 | 8 | 352 | 69 | 436 | 2.75e-31 | 123 |
| MS.gene47843.t1 | MTR_8g094290 | 26.774 | 310 | 198 | 6 | 68 | 350 | 129 | 436 | 5.64e-31 | 122 |
| MS.gene47843.t1 | MTR_3g461440 | 28.114 | 281 | 176 | 6 | 93 | 350 | 15 | 292 | 1.03e-30 | 119 |
| MS.gene47843.t1 | MTR_3g110660 | 32.014 | 278 | 166 | 8 | 8 | 266 | 69 | 342 | 1.35e-30 | 120 |
| MS.gene47843.t1 | MTR_5g096850 | 27.586 | 319 | 197 | 8 | 64 | 354 | 120 | 432 | 3.88e-30 | 120 |
| MS.gene47843.t1 | MTR_1g492640 | 31.560 | 282 | 169 | 8 | 8 | 273 | 77 | 350 | 1.52e-29 | 117 |
| MS.gene47843.t1 | MTR_1g492640 | 31.560 | 282 | 169 | 8 | 8 | 273 | 95 | 368 | 2.96e-29 | 116 |
| MS.gene47843.t1 | MTR_3g461430 | 24.425 | 348 | 232 | 8 | 31 | 350 | 92 | 436 | 4.47e-29 | 117 |
| MS.gene47843.t1 | MTR_3g110430 | 25.389 | 386 | 238 | 11 | 6 | 352 | 95 | 469 | 6.16e-29 | 117 |
| MS.gene47843.t1 | MTR_1g007240 | 27.095 | 358 | 218 | 11 | 33 | 354 | 76 | 426 | 3.72e-28 | 114 |
| MS.gene47843.t1 | MTR_3g088465 | 29.355 | 310 | 194 | 11 | 6 | 300 | 70 | 369 | 8.95e-28 | 112 |
| MS.gene47843.t1 | MTR_3g110420 | 25.984 | 381 | 236 | 14 | 8 | 350 | 60 | 432 | 1.26e-26 | 110 |
| MS.gene47843.t1 | MTR_4g104510 | 25.148 | 338 | 237 | 10 | 8 | 340 | 76 | 402 | 1.80e-26 | 109 |
| MS.gene47843.t1 | MTR_2g031750 | 25.562 | 356 | 218 | 9 | 33 | 352 | 9 | 353 | 2.74e-26 | 108 |
| MS.gene47843.t1 | MTR_5g081630 | 28.045 | 353 | 236 | 12 | 8 | 354 | 9 | 349 | 2.97e-26 | 108 |
| MS.gene47843.t1 | MTR_4g104510 | 25.000 | 336 | 236 | 10 | 8 | 338 | 76 | 400 | 5.19e-26 | 108 |
| MS.gene47843.t1 | MTR_2g031750 | 25.562 | 356 | 218 | 9 | 33 | 352 | 76 | 420 | 5.55e-26 | 108 |
| MS.gene47843.t1 | MTR_1g007180 | 24.650 | 357 | 220 | 10 | 33 | 352 | 76 | 420 | 9.11e-25 | 105 |
| MS.gene47843.t1 | MTR_1g007180 | 25.660 | 265 | 170 | 6 | 112 | 352 | 75 | 336 | 1.56e-19 | 89.0 |
| MS.gene47843.t1 | MTR_3g069960 | 26.100 | 341 | 225 | 12 | 18 | 349 | 19 | 341 | 9.62e-18 | 84.0 |
| MS.gene47843.t1 | MTR_3g069960 | 26.100 | 341 | 225 | 12 | 18 | 349 | 72 | 394 | 1.35e-17 | 84.0 |
| MS.gene47843.t1 | MTR_3g085800 | 65.306 | 49 | 17 | 0 | 306 | 354 | 4 | 52 | 2.16e-17 | 76.6 |
| MS.gene47843.t1 | MTR_4g055637 | 27.322 | 183 | 116 | 5 | 181 | 353 | 168 | 343 | 7.17e-14 | 72.4 |
| MS.gene47843.t1 | MTR_1g492640 | 29.341 | 167 | 114 | 2 | 8 | 172 | 77 | 241 | 3.80e-12 | 66.2 |
| MS.gene47843.t1 | MTR_7g062410 | 21.408 | 341 | 229 | 12 | 17 | 344 | 77 | 391 | 8.66e-12 | 66.2 |
| MS.gene47843.t1 | MTR_1g492640 | 29.341 | 167 | 114 | 2 | 8 | 172 | 95 | 259 | 1.02e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47843.t1 | AT5G40780 | 81.089 | 349 | 65 | 1 | 6 | 354 | 67 | 414 | 0.0 | 598 |
| MS.gene47843.t1 | AT5G40780 | 81.089 | 349 | 65 | 1 | 6 | 354 | 19 | 366 | 0.0 | 598 |
| MS.gene47843.t1 | AT5G40780 | 81.089 | 349 | 65 | 1 | 6 | 354 | 19 | 366 | 0.0 | 598 |
| MS.gene47843.t1 | AT1G48640 | 74.212 | 349 | 89 | 1 | 6 | 354 | 74 | 421 | 0.0 | 543 |
| MS.gene47843.t1 | AT1G24400 | 75.775 | 355 | 84 | 2 | 1 | 354 | 56 | 409 | 0.0 | 531 |
| MS.gene47843.t1 | AT1G67640 | 75.493 | 355 | 85 | 2 | 1 | 354 | 56 | 409 | 0.0 | 514 |
| MS.gene47843.t1 | AT1G61270 | 66.286 | 350 | 117 | 1 | 6 | 354 | 67 | 416 | 6.77e-173 | 488 |
| MS.gene47843.t1 | AT3G01760 | 65.909 | 352 | 116 | 3 | 6 | 354 | 65 | 415 | 4.07e-170 | 482 |
| MS.gene47843.t1 | AT1G25530 | 61.605 | 349 | 133 | 1 | 6 | 354 | 61 | 408 | 3.22e-151 | 433 |
| MS.gene47843.t1 | AT1G71680 | 57.429 | 350 | 147 | 2 | 6 | 354 | 68 | 416 | 4.77e-128 | 374 |
| MS.gene47843.t1 | AT1G71680 | 57.239 | 297 | 125 | 2 | 6 | 301 | 68 | 363 | 5.11e-114 | 336 |
| MS.gene47843.t1 | AT1G47670 | 35.854 | 357 | 218 | 5 | 8 | 354 | 129 | 484 | 9.31e-76 | 243 |
| MS.gene47843.t1 | AT4G35180 | 31.844 | 358 | 226 | 7 | 8 | 353 | 93 | 444 | 3.44e-57 | 193 |
| MS.gene47843.t1 | AT1G10010 | 33.333 | 381 | 213 | 10 | 8 | 352 | 63 | 438 | 7.71e-46 | 163 |
| MS.gene47843.t1 | AT1G10010 | 33.333 | 381 | 213 | 10 | 8 | 352 | 64 | 439 | 8.10e-46 | 163 |
| MS.gene47843.t1 | AT4G35180 | 35.217 | 230 | 142 | 2 | 8 | 234 | 93 | 318 | 2.60e-45 | 158 |
| MS.gene47843.t1 | AT1G58360 | 31.414 | 382 | 219 | 11 | 8 | 352 | 72 | 447 | 4.77e-40 | 147 |
| MS.gene47843.t1 | AT1G08230 | 31.503 | 346 | 217 | 10 | 21 | 353 | 78 | 416 | 4.52e-38 | 141 |
| MS.gene47843.t1 | AT5G41800 | 27.424 | 361 | 239 | 8 | 8 | 353 | 62 | 414 | 7.99e-37 | 138 |
| MS.gene47843.t1 | AT1G77380 | 29.024 | 379 | 227 | 11 | 8 | 350 | 65 | 437 | 2.55e-36 | 137 |
| MS.gene47843.t1 | AT5G49630 | 29.551 | 379 | 228 | 10 | 8 | 350 | 68 | 443 | 1.39e-35 | 135 |
| MS.gene47843.t1 | AT5G09220 | 27.968 | 379 | 234 | 10 | 6 | 350 | 81 | 454 | 2.42e-34 | 132 |
| MS.gene47843.t1 | AT1G08230 | 31.579 | 323 | 201 | 10 | 44 | 353 | 1 | 316 | 4.59e-33 | 126 |
| MS.gene47843.t1 | AT5G63850 | 26.790 | 377 | 239 | 8 | 8 | 350 | 54 | 427 | 1.82e-32 | 126 |
| MS.gene47843.t1 | AT1G44100 | 27.344 | 384 | 233 | 10 | 8 | 350 | 63 | 441 | 2.18e-32 | 126 |
| MS.gene47843.t1 | AT1G08230 | 32.441 | 299 | 182 | 10 | 68 | 353 | 6 | 297 | 1.51e-31 | 121 |
| MS.gene47843.t1 | AT1G08230 | 32.441 | 299 | 182 | 10 | 68 | 353 | 6 | 297 | 1.51e-31 | 121 |
| MS.gene47843.t1 | AT1G08230 | 32.441 | 299 | 182 | 10 | 68 | 353 | 6 | 297 | 1.51e-31 | 121 |
| MS.gene47843.t1 | AT5G23810 | 27.954 | 347 | 203 | 9 | 47 | 351 | 96 | 437 | 1.96e-31 | 124 |
| MS.gene47843.t1 | AT2G36590 | 26.761 | 355 | 238 | 13 | 8 | 354 | 62 | 402 | 4.14e-25 | 105 |
| MS.gene47843.t1 | AT3G55740 | 27.893 | 337 | 225 | 12 | 8 | 338 | 9 | 333 | 5.68e-25 | 104 |
| MS.gene47843.t1 | AT3G55740 | 27.893 | 337 | 225 | 12 | 8 | 338 | 9 | 333 | 5.68e-25 | 104 |
| MS.gene47843.t1 | AT3G55740 | 27.893 | 337 | 225 | 12 | 8 | 338 | 65 | 389 | 8.90e-25 | 104 |
| MS.gene47843.t1 | AT2G39890 | 26.074 | 349 | 235 | 12 | 8 | 349 | 9 | 341 | 1.34e-23 | 100 |
| MS.gene47843.t1 | AT2G39890 | 26.074 | 349 | 235 | 12 | 8 | 349 | 68 | 400 | 1.72e-23 | 101 |
| MS.gene47843.t1 | AT2G39890 | 26.074 | 349 | 235 | 12 | 8 | 349 | 68 | 400 | 1.72e-23 | 101 |
| MS.gene47843.t1 | AT5G23810 | 27.419 | 248 | 152 | 7 | 47 | 271 | 96 | 338 | 6.33e-18 | 84.3 |
| MS.gene47843.t1 | AT2G36590 | 28.185 | 259 | 168 | 11 | 8 | 261 | 62 | 307 | 6.82e-16 | 78.2 |
Find 95 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTCCCTGTTGCTCTTAT+TGG | 0.168322 | 2.3:+2177723 | MS.gene47843:CDS |
| TTCAATTTCTTCAGTGCTTT+AGG | 0.228996 | 2.3:+2177564 | MS.gene47843:CDS |
| GCTTGTCTTGGTTCGCAAAC+TGG | 0.259205 | 2.3:+2178544 | MS.gene47843:CDS |
| GGAATAACCTTCCCATTCTT+TGG | 0.269371 | 2.3:+2178320 | MS.gene47843:CDS |
| ATTTCCCTGTTGCTCTTATT+GGG | 0.271137 | 2.3:+2177724 | MS.gene47843:CDS |
| CCATTCTTTGGTGCCCTCCT+TGG | 0.281653 | 2.3:+2178332 | MS.gene47843:CDS |
| TTTGTTGTCATTCATGTTAT+AGG | 0.284943 | 2.3:+2177831 | MS.gene47843:CDS |
| CTGTTGCTCTTATTGGGTAT+TGG | 0.300006 | 2.3:+2177730 | MS.gene47843:CDS |
| CAAGACAAGCTAAACCTCTT+AGG | 0.301943 | 2.3:-2178531 | None:intergenic |
| CCCAACTTCAACTCCATTGC+TGG | 0.312413 | 2.3:+2176229 | MS.gene47843:CDS |
| CTTATTGGGTATTGGATGTT+TGG | 0.317962 | 2.3:+2177738 | MS.gene47843:CDS |
| AAGAAATTGAAAACAGTTCC+TGG | 0.370996 | 2.3:-2177552 | None:intergenic |
| TAATCACCCTCTACACTCTA+TGG | 0.375402 | 2.3:+2175933 | MS.gene47843:CDS |
| CATTGCGAACAACAAATCTT+AGG | 0.383519 | 2.3:-2178034 | None:intergenic |
| CAATACCCAATAAGAGCAAC+AGG | 0.389191 | 2.3:-2177729 | None:intergenic |
| TTGTAGCCATAGGCCACATC+TGG | 0.403065 | 2.3:-2177516 | None:intergenic |
| GAGATGCATGAAATGGTTCC+AGG | 0.408422 | 2.3:+2175965 | MS.gene47843:CDS |
| TGTAGCTTCCTTGCATTATG+TGG | 0.411632 | 2.3:+2178493 | MS.gene47843:intron |
| TTGGAGAAAAGCTTGGACTC+TGG | 0.412306 | 2.3:+2176029 | MS.gene47843:CDS |
| TCATGTTATAGGAAGCTATC+AGG | 0.416323 | 2.3:+2177842 | MS.gene47843:CDS |
| TCCTCTCCACATTGGACCCT+TGG | 0.420922 | 2.3:-2177667 | None:intergenic |
| CTCCACATTGGACCCTTGGA+TGG | 0.422755 | 2.3:-2177663 | None:intergenic |
| CCAAGGAGGGCACCAAAGAA+TGG | 0.436204 | 2.3:-2178332 | None:intergenic |
| CTAAGAGGTTTAGCTTGTCT+TGG | 0.437451 | 2.3:+2178532 | MS.gene47843:CDS |
| GGACCCTTGGATGGTTTCTC+CGG | 0.438031 | 2.3:-2177654 | None:intergenic |
| CTTCTCTTAATAAACCTACT+TGG | 0.442717 | 2.3:+2177787 | MS.gene47843:CDS |
| GACATTGTTTACATGGTCAC+CGG | 0.442865 | 2.3:+2176091 | MS.gene47843:CDS |
| CTCCATTGCTGGTATCTCCT+TGG | 0.443891 | 2.3:+2176240 | MS.gene47843:CDS |
| CTTGTCTTGGTTCGCAAACT+GGG | 0.451762 | 2.3:+2178545 | MS.gene47843:CDS |
| GATGGTTTCTCCGGTGTGGA+CGG | 0.451778 | 2.3:-2177645 | None:intergenic |
| TTCAGCATTCACAATGTTTG+TGG | 0.454604 | 2.3:+2178298 | MS.gene47843:intron |
| ATGGTTTCTCCGGTGTGGAC+GGG | 0.455777 | 2.3:-2177644 | None:intergenic |
| ACCAGCAATGGAGTTGAAGT+TGG | 0.460631 | 2.3:-2176230 | None:intergenic |
| CTCCAACACCACATTGTGTC+CGG | 0.463600 | 2.3:-2177607 | None:intergenic |
| CTGCAGCAATCATGTCTTTG+AGG | 0.471568 | 2.3:+2176263 | MS.gene47843:CDS |
| ATGAAATGGTTCCAGGAAAA+CGG | 0.476078 | 2.3:+2175972 | MS.gene47843:CDS |
| TGGAGTTGAAGTTGGGAAGA+TGG | 0.477812 | 2.3:-2176222 | None:intergenic |
| ATGTCGAATTGCAGGGGTCC+TGG | 0.479412 | 2.3:+2175884 | MS.gene47843:CDS |
| GGAGTTGAAGTTGGGAAGAT+GGG | 0.488377 | 2.3:-2176221 | None:intergenic |
| TCAGCATTCACAATGTTTGT+GGG | 0.488938 | 2.3:+2178299 | MS.gene47843:intron |
| GGACTTACAAAATATGTTGT+GGG | 0.491845 | 2.3:-2178380 | None:intergenic |
| CAAGGAGGGCACCAAAGAAT+GGG | 0.496713 | 2.3:-2178331 | None:intergenic |
| CCTCTACACTCTATGGCAAA+TGG | 0.497407 | 2.3:+2175940 | MS.gene47843:CDS |
| TTGCTATTTACAAACCTAAG+AGG | 0.497836 | 2.3:+2178517 | MS.gene47843:CDS |
| AACAACAAATCTTAGGAGTC+GGG | 0.497913 | 2.3:-2178027 | None:intergenic |
| TTTGACAGATACCATGAGTT+GGG | 0.500029 | 2.3:+2175995 | MS.gene47843:CDS |
| TGACATGATTGAGACCGTAA+TGG | 0.504825 | 2.3:+2177980 | MS.gene47843:CDS |
| GAGTTGGGACAAGAAGCATT+TGG | 0.508176 | 2.3:+2176010 | MS.gene47843:CDS |
| GAAGCATTTGGAGAAAAGCT+TGG | 0.510904 | 2.3:+2176022 | MS.gene47843:CDS |
| TGGACTTACAAAATATGTTG+TGG | 0.515751 | 2.3:-2178381 | None:intergenic |
| CCAGCAATGGAGTTGAAGTT+GGG | 0.520549 | 2.3:-2176229 | None:intergenic |
| GTTGTTCGCAATGTTTATGT+TGG | 0.530022 | 2.3:+2178044 | MS.gene47843:CDS |
| GCTGCAACTATAAGCCAAGT+AGG | 0.535757 | 2.3:-2177801 | None:intergenic |
| ACATTGTTTACATGGTCACC+GGG | 0.538739 | 2.3:+2176092 | MS.gene47843:CDS |
| ATGCTTCTTGTCCCAACTCA+TGG | 0.547647 | 2.3:-2176006 | None:intergenic |
| GTTCAACCAGATGTGGCCTA+TGG | 0.548195 | 2.3:+2177510 | MS.gene47843:CDS |
| GAACAACAAATCTTAGGAGT+CGG | 0.552204 | 2.3:-2178028 | None:intergenic |
| AGTTGTGGCTTTGTAGCCAT+AGG | 0.553663 | 2.3:-2177526 | None:intergenic |
| TGGTGTGGACATTGTTTACA+TGG | 0.554021 | 2.3:+2176084 | MS.gene47843:CDS |
| AATGGTTGAGATGCATGAAA+TGG | 0.555074 | 2.3:+2175958 | MS.gene47843:CDS |
| AGACATGATTGCTGCAGCCA+AGG | 0.555144 | 2.3:-2176257 | None:intergenic |
| GTAGTTACTCAACAATTGCA+TGG | 0.558837 | 2.3:+2177466 | MS.gene47843:intron |
| GTTTGACAGATACCATGAGT+TGG | 0.571800 | 2.3:+2175994 | MS.gene47843:CDS |
| AACAGTTCCTGGTGTAGTTG+TGG | 0.571899 | 2.3:-2177541 | None:intergenic |
| CAACAATTGATATGTGAAGT+TGG | 0.573630 | 2.3:+2176064 | MS.gene47843:CDS |
| AATAAAACTCCTCTCCACAT+TGG | 0.575187 | 2.3:-2177675 | None:intergenic |
| TTACTCAACAATTGCATGGG+TGG | 0.581664 | 2.3:+2177470 | MS.gene47843:CDS |
| ACAAATCTTAGGAGTCGGGT+TGG | 0.583916 | 2.3:-2178023 | None:intergenic |
| CTTGGATGGTTTCTCCGGTG+TGG | 0.592081 | 2.3:-2177649 | None:intergenic |
| ACTTCACATATCAATTGTTG+TGG | 0.594166 | 2.3:-2176061 | None:intergenic |
| CATTTGCCATAGAGTGTAGA+GGG | 0.594361 | 2.3:-2175939 | None:intergenic |
| TAGTTACTCAACAATTGCAT+GGG | 0.600051 | 2.3:+2177467 | MS.gene47843:intron |
| TGCCGGACACAATGTGGTGT+TGG | 0.600214 | 2.3:+2177605 | MS.gene47843:CDS |
| TACAAAGCCACAACTACACC+AGG | 0.601821 | 2.3:+2177534 | MS.gene47843:CDS |
| GATGTTGCATTTGCCTATGC+CGG | 0.602926 | 2.3:+2177588 | MS.gene47843:CDS |
| AAAGGGAGTTCAACCAGATG+TGG | 0.615250 | 2.3:+2177503 | MS.gene47843:CDS |
| CCATTTGCCATAGAGTGTAG+AGG | 0.615329 | 2.3:-2175940 | None:intergenic |
| ATAGCAAGCCACATAATGCA+AGG | 0.617411 | 2.3:-2178501 | None:intergenic |
| AAAATTAGAATCACCACACC+AGG | 0.621042 | 2.3:-2175902 | None:intergenic |
| GAATTGCAGGGGTCCTGGTG+TGG | 0.635436 | 2.3:+2175889 | MS.gene47843:CDS |
| ATTGTTTACATGGTCACCGG+GGG | 0.638235 | 2.3:+2176094 | MS.gene47843:CDS |
| ATTGATATGTGAAGTTGGTG+TGG | 0.641517 | 2.3:+2176069 | MS.gene47843:CDS |
| TCCAAGGGTCCAATGTGGAG+AGG | 0.647648 | 2.3:+2177666 | MS.gene47843:CDS |
| CACCACATTGTGTCCGGCAT+AGG | 0.647925 | 2.3:-2177601 | None:intergenic |
| GGCAAGAATAAAATGAACAG+AGG | 0.650976 | 2.3:-2176200 | None:intergenic |
| AGCAACAATCCCGTCCACAC+CGG | 0.654369 | 2.3:+2177635 | MS.gene47843:CDS |
| CACACCGGAGAAACCATCCA+AGG | 0.663681 | 2.3:+2177650 | MS.gene47843:CDS |
| AGCCAAGGAGATACCAGCAA+TGG | 0.663690 | 2.3:-2176242 | None:intergenic |
| TTTACAATGTCGAATTGCAG+GGG | 0.670779 | 2.3:+2175878 | None:intergenic |
| CATTGTTTACATGGTCACCG+GGG | 0.672585 | 2.3:+2176093 | MS.gene47843:CDS |
| GAGGGCACCAAAGAATGGGA+AGG | 0.676285 | 2.3:-2178327 | None:intergenic |
| AACCATCCAAGGGTCCAATG+TGG | 0.683222 | 2.3:+2177661 | MS.gene47843:CDS |
| ACACCGGAGAAACCATCCAA+GGG | 0.697058 | 2.3:+2177651 | MS.gene47843:CDS |
| TGCCTATGCCGGACACAATG+TGG | 0.720388 | 2.3:+2177599 | MS.gene47843:CDS |
| AATACCCAATAAGAGCAACA+GGG | 0.735246 | 2.3:-2177728 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGAATATTAATGAAATA+TGG | - | chr2.3:2176907-2176926 | None:intergenic | 10.0% |
| !!! | TATATAATATAAAAGTACAA+TGG | + | chr2.3:2177264-2177283 | MS.gene47843:intron | 10.0% |
| !! | AGAAAATATTTAAGAAAAGA+AGG | - | chr2.3:2176331-2176350 | None:intergenic | 15.0% |
| !! | ATAATATTATGTTATACCAT+TGG | - | chr2.3:2176591-2176610 | None:intergenic | 15.0% |
| !! | CCAAAAAAAAAAAATTGATT+CGG | + | chr2.3:2177146-2177165 | MS.gene47843:intron | 15.0% |
| !!! | GAAAATAGATTTTTTTTTTG+TGG | - | chr2.3:2177389-2177408 | None:intergenic | 15.0% |
| !!! | TAAAATATCCAATTTTAGAA+AGG | - | chr2.3:2178076-2178095 | None:intergenic | 15.0% |
| !!! | TATTTTTTAACTAAACTTGA+TGG | + | chr2.3:2177417-2177436 | MS.gene47843:intron | 15.0% |
| !! | ACATAATATATGTAAGATCA+GGG | + | chr2.3:2177347-2177366 | MS.gene47843:intron | 20.0% |
| !! | TACATAATATATGTAAGATC+AGG | + | chr2.3:2177346-2177365 | MS.gene47843:intron | 20.0% |
| !! | TTTAGTAGTATTTATCAACA+TGG | - | chr2.3:2176395-2176414 | None:intergenic | 20.0% |
| !!! | CCGAATCAATTTTTTTTTTT+TGG | - | chr2.3:2177149-2177168 | None:intergenic | 20.0% |
| !!! | TCAATTTTTTTTTTTTGGTC+AGG | - | chr2.3:2177144-2177163 | None:intergenic | 20.0% |
| !!! | TGTTGATAAATACTACTAAA+AGG | + | chr2.3:2176395-2176414 | MS.gene47843:intron | 20.0% |
| ! | ACAATGCATTATTATATGCA+GGG | + | chr2.3:2177052-2177071 | MS.gene47843:intron | 25.0% |
| ! | ACTAAAAGGTAAATAGAGAT+TGG | + | chr2.3:2176409-2176428 | MS.gene47843:intron | 25.0% |
| ! | ACTGCAAAAAATTCATGATT+TGG | + | chr2.3:2176123-2176142 | MS.gene47843:CDS | 25.0% |
| ! | ATATTCGACTTTATTGAGAA+CGG | - | chr2.3:2176824-2176843 | None:intergenic | 25.0% |
| ! | CATAATATATGTAAGATCAG+GGG | + | chr2.3:2177348-2177367 | MS.gene47843:intron | 25.0% |
| ! | TTATATAAGCTCATCAATAG+AGG | + | chr2.3:2176748-2176767 | MS.gene47843:intron | 25.0% |
| ! | TTTAGGTGTCTAAATTGATT+CGG | + | chr2.3:2176996-2177015 | MS.gene47843:intron | 25.0% |
| !! | AGCTAAACAAATAGCAATTT+TGG | - | chr2.3:2178255-2178274 | None:intergenic | 25.0% |
| !! | TGGTGATTCTAATTTTATCA+TGG | + | chr2.3:2175909-2175928 | MS.gene47843:CDS | 25.0% |
| !! | TTTGTTGTCATTCATGTTAT+AGG | + | chr2.3:2177831-2177850 | MS.gene47843:CDS | 25.0% |
| AAACGACCAAATTGAAGAAT+TGG | - | chr2.3:2176455-2176474 | None:intergenic | 30.0% | |
| AAGAAATTGAAAACAGTTCC+TGG | - | chr2.3:2177555-2177574 | None:intergenic | 30.0% | |
| ACCTTATAAGGTGAATAAGT+GGG | - | chr2.3:2177101-2177120 | None:intergenic | 30.0% | |
| ACTTCACATATCAATTGTTG+TGG | - | chr2.3:2176064-2176083 | None:intergenic | 30.0% | |
| CAACAATTGATATGTGAAGT+TGG | + | chr2.3:2176064-2176083 | MS.gene47843:CDS | 30.0% | |
| CAATGCATTATTATATGCAG+GGG | + | chr2.3:2177053-2177072 | MS.gene47843:intron | 30.0% | |
| CTTCTCTTAATAAACCTACT+TGG | + | chr2.3:2177787-2177806 | MS.gene47843:CDS | 30.0% | |
| GACAATGCATTATTATATGC+AGG | + | chr2.3:2177051-2177070 | MS.gene47843:intron | 30.0% | |
| GGACTTACAAAATATGTTGT+GGG | - | chr2.3:2178383-2178402 | None:intergenic | 30.0% | |
| TAGTTACTCAACAATTGCAT+GGG | + | chr2.3:2177467-2177486 | MS.gene47843:intron | 30.0% | |
| TATTCGACTTTATTGAGAAC+GGG | - | chr2.3:2176823-2176842 | None:intergenic | 30.0% | |
| TCAAATTGGTCACAATATGT+GGG | - | chr2.3:2176973-2176992 | None:intergenic | 30.0% | |
| TCTTCAATTTGGTCGTTTAA+TGG | + | chr2.3:2176457-2176476 | MS.gene47843:intron | 30.0% | |
| TGGACTTACAAAATATGTTG+TGG | - | chr2.3:2178384-2178403 | None:intergenic | 30.0% | |
| TGTGAAGAATCATATGCAAA+TGG | - | chr2.3:2177891-2177910 | None:intergenic | 30.0% | |
| TTCAATTTCTTCAGTGCTTT+AGG | + | chr2.3:2177564-2177583 | MS.gene47843:CDS | 30.0% | |
| ! | ATAGAGACTTTAGAAAGACT+TGG | + | chr2.3:2176666-2176685 | MS.gene47843:intron | 30.0% |
| ! | ATTTCTGGACTAAAGTCAAA+TGG | - | chr2.3:2177241-2177260 | None:intergenic | 30.0% |
| ! | ATTTTATCGTTATCCGATGA+TGG | + | chr2.3:2178184-2178203 | MS.gene47843:intron | 30.0% |
| ! | GATTGGATTGTTCTTTTAGT+CGG | - | chr2.3:2176792-2176811 | None:intergenic | 30.0% |
| !! | AAGTCTTTCTAAAGTCTCTA+TGG | - | chr2.3:2176667-2176686 | None:intergenic | 30.0% |
| !! | CAATTTTGAAGATGATGTGT+TGG | + | chr2.3:2176536-2176555 | MS.gene47843:intron | 30.0% |
| !! | TTGCTATTTACAAACCTAAG+AGG | + | chr2.3:2178517-2178536 | MS.gene47843:CDS | 30.0% |
| !!! | ACGCAATTTTTTGACCATTA+CGG | - | chr2.3:2177997-2178016 | None:intergenic | 30.0% |
| !!! | ATATTTTAGCTCAGTTGGTA+GGG | + | chr2.3:2177319-2177338 | MS.gene47843:intron | 30.0% |
| !!! | CAATCATATTTTAGCTCAGT+TGG | + | chr2.3:2177314-2177333 | MS.gene47843:intron | 30.0% |
| AAAATTAGAATCACCACACC+AGG | - | chr2.3:2175905-2175924 | None:intergenic | 35.0% | |
| AACAACAAATCTTAGGAGTC+GGG | - | chr2.3:2178030-2178049 | None:intergenic | 35.0% | |
| AAGCTATCAGGTATGTATGA+TGG | + | chr2.3:2177854-2177873 | MS.gene47843:intron | 35.0% | |
| AATAAAACTCCTCTCCACAT+TGG | - | chr2.3:2177678-2177697 | None:intergenic | 35.0% | |
| AATACCCAATAAGAGCAACA+GGG | - | chr2.3:2177731-2177750 | None:intergenic | 35.0% | |
| AATGGTTGAGATGCATGAAA+TGG | + | chr2.3:2175958-2175977 | MS.gene47843:CDS | 35.0% | |
| AGACACCTAAAACGTCAAAT+TGG | - | chr2.3:2176987-2177006 | None:intergenic | 35.0% | |
| AGTTATCAAGTACCTTACCT+TGG | + | chr2.3:2176628-2176647 | MS.gene47843:intron | 35.0% | |
| ATGAAATGGTTCCAGGAAAA+CGG | + | chr2.3:2175972-2175991 | MS.gene47843:CDS | 35.0% | |
| ATGGGTGGCTTCATTAAAAA+AGG | + | chr2.3:2177485-2177504 | MS.gene47843:CDS | 35.0% | |
| ATTATTATATGCAGGGGTTG+GGG | + | chr2.3:2177059-2177078 | MS.gene47843:intron | 35.0% | |
| ATTTCCCTGTTGCTCTTATT+GGG | + | chr2.3:2177724-2177743 | MS.gene47843:CDS | 35.0% | |
| CACCTTATAAGGTGAATAAG+TGG | - | chr2.3:2177102-2177121 | None:intergenic | 35.0% | |
| CATTATTATATGCAGGGGTT+GGG | + | chr2.3:2177058-2177077 | MS.gene47843:intron | 35.0% | |
| CATTGCGAACAACAAATCTT+AGG | - | chr2.3:2178037-2178056 | None:intergenic | 35.0% | |
| CCTTATAAGGTGAATAAGTG+GGG | - | chr2.3:2177100-2177119 | None:intergenic | 35.0% | |
| GAACAACAAATCTTAGGAGT+CGG | - | chr2.3:2178031-2178050 | None:intergenic | 35.0% | |
| GGCAAGAATAAAATGAACAG+AGG | - | chr2.3:2176203-2176222 | None:intergenic | 35.0% | |
| GTAGTTACTCAACAATTGCA+TGG | + | chr2.3:2177466-2177485 | MS.gene47843:intron | 35.0% | |
| GTCAAATTGGTCACAATATG+TGG | - | chr2.3:2176974-2176993 | None:intergenic | 35.0% | |
| GTCTCAATCATGTCAAAAAC+AGG | - | chr2.3:2177975-2177994 | None:intergenic | 35.0% | |
| GTTGTTCGCAATGTTTATGT+TGG | + | chr2.3:2178044-2178063 | MS.gene47843:CDS | 35.0% | |
| TAGCGACCAATTCTTCAATT+TGG | + | chr2.3:2176446-2176465 | MS.gene47843:intron | 35.0% | |
| TATTTCCCTGTTGCTCTTAT+TGG | + | chr2.3:2177723-2177742 | MS.gene47843:CDS | 35.0% | |
| TCAGCATTCACAATGTTTGT+GGG | + | chr2.3:2178299-2178318 | MS.gene47843:intron | 35.0% | |
| TCATGTTATAGGAAGCTATC+AGG | + | chr2.3:2177842-2177861 | MS.gene47843:CDS | 35.0% | |
| TGGCTAGAATTCACCTTATA+AGG | - | chr2.3:2177113-2177132 | None:intergenic | 35.0% | |
| TGGGTGGCTTCATTAAAAAA+GGG | + | chr2.3:2177486-2177505 | MS.gene47843:CDS | 35.0% | |
| TTATGAGAGAGCCAAAATCA+TGG | + | chr2.3:2176562-2176581 | MS.gene47843:intron | 35.0% | |
| TTCAGCATTCACAATGTTTG+TGG | + | chr2.3:2178298-2178317 | MS.gene47843:intron | 35.0% | |
| TTTGACAGATACCATGAGTT+GGG | + | chr2.3:2175995-2176014 | MS.gene47843:CDS | 35.0% | |
| ! | ACCATTGGTATCCATGATTT+TGG | - | chr2.3:2176576-2176595 | None:intergenic | 35.0% |
| ! | TGTGACCAATTTGACGTTTT+AGG | + | chr2.3:2176979-2176998 | MS.gene47843:intron | 35.0% |
| !! | ATTGATATGTGAAGTTGGTG+TGG | + | chr2.3:2176069-2176088 | MS.gene47843:CDS | 35.0% |
| !! | CTTATTGGGTATTGGATGTT+TGG | + | chr2.3:2177738-2177757 | MS.gene47843:CDS | 35.0% |
| !! | GGTTGATGATTGATACTGAA+TGG | - | chr2.3:2176310-2176329 | None:intergenic | 35.0% |
| !!! | CATATTTTAGCTCAGTTGGT+AGG | + | chr2.3:2177318-2177337 | MS.gene47843:intron | 35.0% |
| AAGATCAGGGGTTCAAACAT+CGG | + | chr2.3:2177360-2177379 | MS.gene47843:intron | 40.0% | |
| ACATTGTTTACATGGTCACC+GGG | + | chr2.3:2176092-2176111 | MS.gene47843:CDS | 40.0% | |
| ATAGCAAGCCACATAATGCA+AGG | - | chr2.3:2178504-2178523 | None:intergenic | 40.0% | |
| ATCCTCCAAAAAATCCAAGG+AGG | - | chr2.3:2178349-2178368 | None:intergenic | 40.0% | |
| CAAGACAAGCTAAACCTCTT+AGG | - | chr2.3:2178534-2178553 | None:intergenic | 40.0% | |
| CAATACCCAATAAGAGCAAC+AGG | - | chr2.3:2177732-2177751 | None:intergenic | 40.0% | |
| CATTTGCCATAGAGTGTAGA+GGG | - | chr2.3:2175942-2175961 | None:intergenic | 40.0% | |
| CCAATCCTCCAAAAAATCCA+AGG | - | chr2.3:2178352-2178371 | None:intergenic | 40.0% | |
| CCCCACTTATTCACCTTATA+AGG | + | chr2.3:2177097-2177116 | MS.gene47843:intron | 40.0% | |
| CTGTTGCTCTTATTGGGTAT+TGG | + | chr2.3:2177730-2177749 | MS.gene47843:CDS | 40.0% | |
| GACATTGTTTACATGGTCAC+CGG | + | chr2.3:2176091-2176110 | MS.gene47843:CDS | 40.0% | |
| GCATTATTATATGCAGGGGT+TGG | + | chr2.3:2177057-2177076 | MS.gene47843:intron | 40.0% | |
| GCCAAAATCATGGATACCAA+TGG | + | chr2.3:2176572-2176591 | MS.gene47843:intron | 40.0% | |
| GGAATAACCTTCCCATTCTT+TGG | + | chr2.3:2178320-2178339 | MS.gene47843:CDS | 40.0% | |
| GTTTGACAGATACCATGAGT+TGG | + | chr2.3:2175994-2176013 | MS.gene47843:CDS | 40.0% | |
| TAATCACCCTCTACACTCTA+TGG | + | chr2.3:2175933-2175952 | MS.gene47843:CDS | 40.0% | |
| TCCTCCAAAAAATCCAAGGA+GGG | - | chr2.3:2178348-2178367 | None:intergenic | 40.0% | |
| TGACATGATTGAGACCGTAA+TGG | + | chr2.3:2177980-2177999 | MS.gene47843:CDS | 40.0% | |
| TGGTGTGGACATTGTTTACA+TGG | + | chr2.3:2176084-2176103 | MS.gene47843:CDS | 40.0% | |
| TGTAGCTTCCTTGCATTATG+TGG | + | chr2.3:2178493-2178512 | MS.gene47843:intron | 40.0% | |
| TTACTCAACAATTGCATGGG+TGG | + | chr2.3:2177470-2177489 | MS.gene47843:CDS | 40.0% | |
| ! | GAAGCATTTGGAGAAAAGCT+TGG | + | chr2.3:2176022-2176041 | MS.gene47843:CDS | 40.0% |
| ! | TATCTGTCAAACCGTTTTCC+TGG | - | chr2.3:2175986-2176005 | None:intergenic | 40.0% |
| !! | CTAAGAGGTTTAGCTTGTCT+TGG | + | chr2.3:2178532-2178551 | MS.gene47843:CDS | 40.0% |
| !! | GGTGAGCACCTTTCTAAAAT+TGG | + | chr2.3:2178065-2178084 | MS.gene47843:intron | 40.0% |
| !! | TTTTTGGTCAGGTAGTCTAG+TGG | - | chr2.3:2177133-2177152 | None:intergenic | 40.0% |
| !!! | CCTTGGATTTTTTGGAGGAT+TGG | + | chr2.3:2178349-2178368 | MS.gene47843:CDS | 40.0% |
| AAAGGGAGTTCAACCAGATG+TGG | + | chr2.3:2177503-2177522 | MS.gene47843:CDS | 45.0% | |
| AACAGTTCCTGGTGTAGTTG+TGG | - | chr2.3:2177544-2177563 | None:intergenic | 45.0% | |
| ACAAATCTTAGGAGTCGGGT+TGG | - | chr2.3:2178026-2178045 | None:intergenic | 45.0% | |
| ACACGTTGCTCATCAGTAAG+AGG | - | chr2.3:2176711-2176730 | None:intergenic | 45.0% | |
| ACCAGCAATGGAGTTGAAGT+TGG | - | chr2.3:2176233-2176252 | None:intergenic | 45.0% | |
| ACCCACGAAATCTCCATCAT+CGG | - | chr2.3:2178200-2178219 | None:intergenic | 45.0% | |
| ACCTTACCTTGGATGATCGA+AGG | + | chr2.3:2176639-2176658 | MS.gene47843:intron | 45.0% | |
| ATGCTTCTTGTCCCAACTCA+TGG | - | chr2.3:2176009-2176028 | None:intergenic | 45.0% | |
| ATGGATCCTTCGATCATCCA+AGG | - | chr2.3:2176648-2176667 | None:intergenic | 45.0% | |
| ATTGTTTACATGGTCACCGG+GGG | + | chr2.3:2176094-2176113 | MS.gene47843:CDS | 45.0% | |
| CATTGTTTACATGGTCACCG+GGG | + | chr2.3:2176093-2176112 | MS.gene47843:CDS | 45.0% | |
| CCAGCAATGGAGTTGAAGTT+GGG | - | chr2.3:2176232-2176251 | None:intergenic | 45.0% | |
| CCATTTGCCATAGAGTGTAG+AGG | - | chr2.3:2175943-2175962 | None:intergenic | 45.0% | |
| CCTCTACACTCTATGGCAAA+TGG | + | chr2.3:2175940-2175959 | MS.gene47843:CDS | 45.0% | |
| CTGCAGCAATCATGTCTTTG+AGG | + | chr2.3:2176263-2176282 | MS.gene47843:CDS | 45.0% | |
| GAGATGCATGAAATGGTTCC+AGG | + | chr2.3:2175965-2175984 | MS.gene47843:CDS | 45.0% | |
| GATGTTGCATTTGCCTATGC+CGG | + | chr2.3:2177588-2177607 | MS.gene47843:CDS | 45.0% | |
| GCTGCAACTATAAGCCAAGT+AGG | - | chr2.3:2177804-2177823 | None:intergenic | 45.0% | |
| GGAGTTGAAGTTGGGAAGAT+GGG | - | chr2.3:2176224-2176243 | None:intergenic | 45.0% | |
| TACAAAGCCACAACTACACC+AGG | + | chr2.3:2177534-2177553 | MS.gene47843:CDS | 45.0% | |
| TCCTTCGATCATCCAAGGTA+AGG | - | chr2.3:2176643-2176662 | None:intergenic | 45.0% | |
| TGGAGTTGAAGTTGGGAAGA+TGG | - | chr2.3:2176225-2176244 | None:intergenic | 45.0% | |
| TTATTGAGAACGGGTCGTGA+TGG | - | chr2.3:2176814-2176833 | None:intergenic | 45.0% | |
| TTGGAGAAAAGCTTGGACTC+TGG | + | chr2.3:2176029-2176048 | MS.gene47843:CDS | 45.0% | |
| !! | AGTTGTGGCTTTGTAGCCAT+AGG | - | chr2.3:2177529-2177548 | None:intergenic | 45.0% |
| !! | ATCCGATGATGGAGATTTCG+TGG | + | chr2.3:2178195-2178214 | MS.gene47843:intron | 45.0% |
| !! | GAGTTGGGACAAGAAGCATT+TGG | + | chr2.3:2176010-2176029 | MS.gene47843:CDS | 45.0% |
| !! | TCCGATGATGGAGATTTCGT+GGG | + | chr2.3:2178196-2178215 | MS.gene47843:intron | 45.0% |
| !! | TTTTTGCAGTGATTTGCCCC+CGG | - | chr2.3:2176113-2176132 | None:intergenic | 45.0% |
| !! | TTATATTATATATTAATTTC+TGG | - | chr2.3:2177256-2177275 | None:intergenic | 5.0% |
| !!! | TATTTTTCTTTAAATATATT+TGG | + | chr2.3:2178411-2178430 | MS.gene47843:intron | 5.0% |
| !!! | TTAAAGAAAAATAAATTTTA+TGG | - | chr2.3:2178404-2178423 | None:intergenic | 5.0% |
| AACCATCCAAGGGTCCAATG+TGG | + | chr2.3:2177661-2177680 | MS.gene47843:CDS | 50.0% | |
| ACACCGGAGAAACCATCCAA+GGG | + | chr2.3:2177651-2177670 | MS.gene47843:CDS | 50.0% | |
| AGACATGATTGCTGCAGCCA+AGG | - | chr2.3:2176260-2176279 | None:intergenic | 50.0% | |
| AGCCAAGGAGATACCAGCAA+TGG | - | chr2.3:2176245-2176264 | None:intergenic | 50.0% | |
| CCCAACTTCAACTCCATTGC+TGG | + | chr2.3:2176229-2176248 | MS.gene47843:CDS | 50.0% | |
| CTCCAACACCACATTGTGTC+CGG | - | chr2.3:2177610-2177629 | None:intergenic | 50.0% | |
| CTCCATTGCTGGTATCTCCT+TGG | + | chr2.3:2176240-2176259 | MS.gene47843:CDS | 50.0% | |
| GTGAGCATAGCTCAGTTGGT+AGG | + | chr2.3:2177029-2177048 | MS.gene47843:intron | 50.0% | |
| GTTCAACCAGATGTGGCCTA+TGG | + | chr2.3:2177510-2177529 | MS.gene47843:CDS | 50.0% | |
| TCTCGTGAGCATAGCTCAGT+TGG | + | chr2.3:2177025-2177044 | MS.gene47843:intron | 50.0% | |
| TTGTAGCCATAGGCCACATC+TGG | - | chr2.3:2177519-2177538 | None:intergenic | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | - | chr2.3:2177093-2177112 | None:intergenic | 50.0% |
| ! | GCTTGTCTTGGTTCGCAAAC+TGG | + | chr2.3:2178544-2178563 | MS.gene47843:CDS | 50.0% |
| !! | CAAGGAGGGCACCAAAGAAT+GGG | - | chr2.3:2178334-2178353 | None:intergenic | 50.0% |
| !!! | GCCCTCCTTGGATTTTTTGG+AGG | + | chr2.3:2178344-2178363 | MS.gene47843:CDS | 50.0% |
| !!! | GGTGCCCTCCTTGGATTTTT+TGG | + | chr2.3:2178341-2178360 | MS.gene47843:CDS | 50.0% |
| AGCAACAATCCCGTCCACAC+CGG | + | chr2.3:2177635-2177654 | MS.gene47843:CDS | 55.0% | |
| ATGGTTTCTCCGGTGTGGAC+GGG | - | chr2.3:2177647-2177666 | None:intergenic | 55.0% | |
| ATGTCGAATTGCAGGGGTCC+TGG | + | chr2.3:2175884-2175903 | MS.gene47843:CDS | 55.0% | |
| CACACCGGAGAAACCATCCA+AGG | + | chr2.3:2177650-2177669 | MS.gene47843:CDS | 55.0% | |
| CACCACATTGTGTCCGGCAT+AGG | - | chr2.3:2177604-2177623 | None:intergenic | 55.0% | |
| CTCCACATTGGACCCTTGGA+TGG | - | chr2.3:2177666-2177685 | None:intergenic | 55.0% | |
| CTTGGATGGTTTCTCCGGTG+TGG | - | chr2.3:2177652-2177671 | None:intergenic | 55.0% | |
| GATGGTTTCTCCGGTGTGGA+CGG | - | chr2.3:2177648-2177667 | None:intergenic | 55.0% | |
| GGACCCTTGGATGGTTTCTC+CGG | - | chr2.3:2177657-2177676 | None:intergenic | 55.0% | |
| TCCAAGGGTCCAATGTGGAG+AGG | + | chr2.3:2177666-2177685 | MS.gene47843:CDS | 55.0% | |
| TCCTCTCCACATTGGACCCT+TGG | - | chr2.3:2177670-2177689 | None:intergenic | 55.0% | |
| TGCCGGACACAATGTGGTGT+TGG | + | chr2.3:2177605-2177624 | MS.gene47843:CDS | 55.0% | |
| TGCCTATGCCGGACACAATG+TGG | + | chr2.3:2177599-2177618 | MS.gene47843:CDS | 55.0% | |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | - | chr2.3:2177092-2177111 | None:intergenic | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | - | chr2.3:2177091-2177110 | None:intergenic | 55.0% |
| !! | CCAAGGAGGGCACCAAAGAA+TGG | - | chr2.3:2178335-2178354 | None:intergenic | 55.0% |
| !! | CCATTCTTTGGTGCCCTCCT+TGG | + | chr2.3:2178332-2178351 | MS.gene47843:CDS | 55.0% |
| !! | GAGAACGGGTCGTGATGGAT+TGG | - | chr2.3:2176809-2176828 | None:intergenic | 55.0% |
| !! | GAGGGCACCAAAGAATGGGA+AGG | - | chr2.3:2178330-2178349 | None:intergenic | 55.0% |
| GAATTGCAGGGGTCCTGGTG+TGG | + | chr2.3:2175889-2175908 | MS.gene47843:CDS | 60.0% | |
| AGGGGTTGGGGTTCGAACCC+CGG | + | chr2.3:2177071-2177090 | MS.gene47843:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 2175884 | 2178566 | 2175884 | ID=MS.gene47843 |
| chr2.3 | mRNA | 2175884 | 2178566 | 2175884 | ID=MS.gene47843.t1;Parent=MS.gene47843 |
| chr2.3 | exon | 2175884 | 2176284 | 2175884 | ID=MS.gene47843.t1.exon1;Parent=MS.gene47843.t1 |
| chr2.3 | CDS | 2175884 | 2176284 | 2175884 | ID=cds.MS.gene47843.t1;Parent=MS.gene47843.t1 |
| chr2.3 | exon | 2177470 | 2177863 | 2177470 | ID=MS.gene47843.t1.exon2;Parent=MS.gene47843.t1 |
| chr2.3 | CDS | 2177470 | 2177863 | 2177470 | ID=cds.MS.gene47843.t1;Parent=MS.gene47843.t1 |
| chr2.3 | exon | 2177960 | 2178065 | 2177960 | ID=MS.gene47843.t1.exon3;Parent=MS.gene47843.t1 |
| chr2.3 | CDS | 2177960 | 2178065 | 2177960 | ID=cds.MS.gene47843.t1;Parent=MS.gene47843.t1 |
| chr2.3 | exon | 2178303 | 2178394 | 2178303 | ID=MS.gene47843.t1.exon4;Parent=MS.gene47843.t1 |
| chr2.3 | CDS | 2178303 | 2178394 | 2178303 | ID=cds.MS.gene47843.t1;Parent=MS.gene47843.t1 |
| chr2.3 | exon | 2178498 | 2178566 | 2178498 | ID=MS.gene47843.t1.exon5;Parent=MS.gene47843.t1 |
| chr2.3 | CDS | 2178498 | 2178566 | 2178498 | ID=cds.MS.gene47843.t1;Parent=MS.gene47843.t1 |
| Gene Sequence |
| Protein sequence |
