Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47820.t1 | XP_003597755.2 | 98.6 | 430 | 5 | 1 | 1 | 430 | 1 | 429 | 3.90E-239 | 837 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47820.t1 | Q9FKS8 | 79.2 | 413 | 79 | 2 | 24 | 430 | 3 | 414 | 2.6e-191 | 669.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47820.t1 | G7II25 | 98.6 | 430 | 5 | 1 | 1 | 430 | 1 | 429 | 2.8e-239 | 837.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049306 | MS.gene47820 | -0.803226 | 3.86E-49 | -1.69E-46 |
| MS.gene050122 | MS.gene47820 | 0.801171 | 1.02E-48 | -1.69E-46 |
| MS.gene050477 | MS.gene47820 | 0.801145 | 1.03E-48 | -1.69E-46 |
| MS.gene050545 | MS.gene47820 | 0.803118 | 4.06E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene47820 | 0.806637 | 7.47E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene47820 | 0.811928 | 5.48E-51 | -1.69E-46 |
| MS.gene051568 | MS.gene47820 | 0.810554 | 1.09E-50 | -1.69E-46 |
| MS.gene051588 | MS.gene47820 | 0.848984 | 4.33E-60 | -1.69E-46 |
| MS.gene052011 | MS.gene47820 | -0.80534 | 1.40E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene47820 | 0.823961 | 1.04E-53 | -1.69E-46 |
| MS.gene053169 | MS.gene47820 | 0.825101 | 5.63E-54 | -1.69E-46 |
| MS.gene053873 | MS.gene47820 | 0.853484 | 2.32E-61 | -1.69E-46 |
| MS.gene054102 | MS.gene47820 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene054183 | MS.gene47820 | 0.82887 | 7.07E-55 | -1.69E-46 |
| MS.gene054556 | MS.gene47820 | 0.810997 | 8.72E-51 | -1.69E-46 |
| MS.gene054920 | MS.gene47820 | 0.860315 | 2.25E-63 | -1.69E-46 |
| MS.gene055369 | MS.gene47820 | 0.811346 | 7.33E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene47820 | 0.811869 | 5.64E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene47820 | 0.81767 | 2.92E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene47820 | 0.85151 | 8.47E-61 | -1.69E-46 |
| MS.gene055911 | MS.gene47820 | 0.856702 | 2.69E-62 | -1.69E-46 |
| MS.gene05601 | MS.gene47820 | 0.813682 | 2.26E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene47820 | 0.804664 | 1.94E-49 | -1.69E-46 |
| MS.gene056346 | MS.gene47820 | 0.803229 | 3.85E-49 | -1.69E-46 |
| MS.gene056514 | MS.gene47820 | 0.877618 | 5.44E-69 | -1.69E-46 |
| MS.gene057019 | MS.gene47820 | 0.802602 | 5.19E-49 | -1.69E-46 |
| MS.gene057321 | MS.gene47820 | -0.839901 | 1.20E-57 | -1.69E-46 |
| MS.gene057476 | MS.gene47820 | 0.841202 | 5.48E-58 | -1.69E-46 |
| MS.gene057605 | MS.gene47820 | -0.806508 | 7.95E-50 | -1.69E-46 |
| MS.gene057610 | MS.gene47820 | 0.801234 | 9.92E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene47820 | 0.807523 | 4.85E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene47820 | 0.813458 | 2.53E-51 | -1.69E-46 |
| MS.gene057825 | MS.gene47820 | 0.80992 | 1.49E-50 | -1.69E-46 |
| MS.gene057888 | MS.gene47820 | 0.829248 | 5.73E-55 | -1.69E-46 |
| MS.gene058007 | MS.gene47820 | 0.829266 | 5.67E-55 | -1.69E-46 |
| MS.gene058444 | MS.gene47820 | 0.800233 | 1.59E-48 | -1.69E-46 |
| MS.gene058529 | MS.gene47820 | 0.804999 | 1.65E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene47820 | 0.831992 | 1.22E-55 | -1.69E-46 |
| MS.gene058948 | MS.gene47820 | 0.808941 | 2.42E-50 | -1.69E-46 |
| MS.gene059082 | MS.gene47820 | 0.812485 | 4.14E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene47820 | 0.84073 | 7.29E-58 | -1.69E-46 |
| MS.gene059462 | MS.gene47820 | 0.8322 | 1.08E-55 | -1.69E-46 |
| MS.gene059868 | MS.gene47820 | 0.846034 | 2.80E-59 | -1.69E-46 |
| MS.gene059870 | MS.gene47820 | 0.81159 | 6.49E-51 | -1.69E-46 |
| MS.gene059876 | MS.gene47820 | 0.809275 | 2.05E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene47820 | 0.821489 | 3.93E-53 | -1.69E-46 |
| MS.gene060485 | MS.gene47820 | 0.811151 | 8.08E-51 | -1.69E-46 |
| MS.gene061214 | MS.gene47820 | 0.850131 | 2.07E-60 | -1.69E-46 |
| MS.gene061215 | MS.gene47820 | 0.845951 | 2.95E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47820.t1 | MTR_2g101920 | 98.605 | 430 | 5 | 1 | 1 | 430 | 1 | 429 | 0.0 | 865 |
| MS.gene47820.t1 | MTR_6g022790 | 75.294 | 425 | 97 | 3 | 12 | 430 | 1 | 423 | 0.0 | 675 |
| MS.gene47820.t1 | MTR_7g038910 | 80.233 | 430 | 66 | 2 | 1 | 430 | 1 | 411 | 0.0 | 673 |
| MS.gene47820.t1 | MTR_7g038910 | 79.902 | 408 | 63 | 2 | 1 | 408 | 1 | 389 | 0.0 | 632 |
| MS.gene47820.t1 | MTR_7g038910 | 79.045 | 377 | 60 | 2 | 1 | 377 | 1 | 358 | 0.0 | 614 |
| MS.gene47820.t1 | MTR_6g023065 | 72.055 | 433 | 113 | 4 | 1 | 430 | 4 | 431 | 0.0 | 614 |
| MS.gene47820.t1 | MTR_8g080120 | 68.329 | 401 | 126 | 1 | 30 | 430 | 5 | 404 | 0.0 | 597 |
| MS.gene47820.t1 | MTR_6g022780 | 75.063 | 397 | 95 | 3 | 35 | 430 | 3 | 396 | 0.0 | 585 |
| MS.gene47820.t1 | MTR_6g023075 | 73.485 | 396 | 103 | 2 | 36 | 430 | 2 | 396 | 0.0 | 574 |
| MS.gene47820.t1 | MTR_4g103890 | 68.668 | 383 | 119 | 1 | 48 | 430 | 10 | 391 | 0.0 | 572 |
| MS.gene47820.t1 | MTR_2g096830 | 73.990 | 396 | 101 | 2 | 36 | 430 | 2 | 396 | 0.0 | 554 |
| MS.gene47820.t1 | MTR_3g085820 | 71.944 | 360 | 100 | 1 | 25 | 384 | 10 | 368 | 0.0 | 553 |
| MS.gene47820.t1 | MTR_5g054730 | 62.044 | 411 | 151 | 2 | 20 | 430 | 2 | 407 | 0.0 | 516 |
| MS.gene47820.t1 | MTR_2g096830 | 72.595 | 343 | 92 | 2 | 36 | 377 | 2 | 343 | 1.10e-178 | 502 |
| MS.gene47820.t1 | MTR_1g093020 | 61.347 | 401 | 150 | 2 | 30 | 430 | 10 | 405 | 9.34e-178 | 503 |
| MS.gene47820.t1 | MTR_1g093020 | 61.347 | 401 | 150 | 2 | 30 | 430 | 10 | 405 | 3.04e-177 | 502 |
| MS.gene47820.t1 | MTR_0531s0020 | 68.362 | 354 | 105 | 3 | 1 | 352 | 4 | 352 | 7.05e-173 | 488 |
| MS.gene47820.t1 | MTR_1g093030 | 60.000 | 400 | 155 | 2 | 31 | 430 | 11 | 405 | 9.64e-172 | 488 |
| MS.gene47820.t1 | MTR_3g005740 | 53.483 | 402 | 184 | 2 | 31 | 429 | 35 | 436 | 7.22e-150 | 434 |
| MS.gene47820.t1 | MTR_5g023240 | 38.780 | 410 | 239 | 5 | 32 | 430 | 70 | 478 | 1.27e-95 | 296 |
| MS.gene47820.t1 | MTR_3g115090 | 37.162 | 444 | 257 | 9 | 4 | 430 | 39 | 477 | 1.05e-94 | 294 |
| MS.gene47820.t1 | MTR_2g012470 | 38.404 | 401 | 236 | 5 | 40 | 430 | 87 | 486 | 6.70e-94 | 292 |
| MS.gene47820.t1 | MTR_5g023260 | 37.713 | 411 | 243 | 6 | 32 | 430 | 91 | 500 | 3.60e-91 | 286 |
| MS.gene47820.t1 | MTR_4g075750 | 35.697 | 423 | 256 | 4 | 23 | 429 | 45 | 467 | 9.90e-89 | 278 |
| MS.gene47820.t1 | MTR_3g110660 | 31.264 | 451 | 266 | 11 | 12 | 426 | 1 | 443 | 3.01e-58 | 198 |
| MS.gene47820.t1 | MTR_1g105980 | 31.151 | 443 | 245 | 13 | 35 | 428 | 11 | 442 | 3.56e-55 | 190 |
| MS.gene47820.t1 | MTR_1g007380 | 31.019 | 432 | 248 | 10 | 35 | 426 | 12 | 433 | 2.60e-53 | 185 |
| MS.gene47820.t1 | MTR_8g099320 | 29.384 | 422 | 274 | 10 | 24 | 429 | 2 | 415 | 2.00e-52 | 182 |
| MS.gene47820.t1 | MTR_1g105995 | 30.930 | 430 | 250 | 12 | 35 | 426 | 11 | 431 | 3.98e-52 | 182 |
| MS.gene47820.t1 | MTR_1g105990 | 32.723 | 437 | 237 | 15 | 35 | 426 | 10 | 434 | 6.62e-52 | 181 |
| MS.gene47820.t1 | MTR_4g055610 | 28.176 | 433 | 286 | 11 | 11 | 429 | 6 | 427 | 3.88e-51 | 179 |
| MS.gene47820.t1 | MTR_1g492640 | 29.345 | 443 | 284 | 12 | 1 | 429 | 19 | 446 | 3.91e-51 | 179 |
| MS.gene47820.t1 | MTR_3g088475 | 30.115 | 435 | 266 | 10 | 26 | 428 | 15 | 443 | 4.35e-49 | 174 |
| MS.gene47820.t1 | MTR_1g106000 | 29.206 | 428 | 244 | 11 | 49 | 426 | 16 | 434 | 3.20e-48 | 171 |
| MS.gene47820.t1 | MTR_3g088455 | 29.330 | 433 | 267 | 10 | 26 | 426 | 15 | 440 | 4.20e-47 | 169 |
| MS.gene47820.t1 | MTR_3g096800 | 31.308 | 428 | 236 | 12 | 40 | 426 | 28 | 438 | 7.59e-47 | 168 |
| MS.gene47820.t1 | MTR_3g461480 | 28.959 | 442 | 267 | 11 | 23 | 426 | 2 | 434 | 1.24e-46 | 167 |
| MS.gene47820.t1 | MTR_4g073520 | 27.451 | 459 | 278 | 11 | 10 | 428 | 32 | 475 | 9.66e-46 | 166 |
| MS.gene47820.t1 | MTR_4g073520 | 27.451 | 459 | 278 | 11 | 10 | 428 | 32 | 475 | 1.56e-45 | 165 |
| MS.gene47820.t1 | MTR_1g029750 | 29.545 | 440 | 264 | 11 | 25 | 426 | 13 | 444 | 4.09e-45 | 163 |
| MS.gene47820.t1 | MTR_3g096830 | 29.147 | 422 | 254 | 10 | 40 | 428 | 22 | 431 | 1.27e-44 | 161 |
| MS.gene47820.t1 | MTR_1g007270 | 28.878 | 419 | 258 | 12 | 40 | 428 | 28 | 436 | 6.69e-44 | 160 |
| MS.gene47820.t1 | MTR_5g096840 | 27.891 | 441 | 266 | 11 | 25 | 426 | 9 | 436 | 2.97e-43 | 158 |
| MS.gene47820.t1 | MTR_3g110660 | 32.286 | 350 | 210 | 10 | 12 | 342 | 1 | 342 | 1.11e-42 | 154 |
| MS.gene47820.t1 | MTR_3g096840 | 29.880 | 415 | 244 | 12 | 49 | 426 | 40 | 444 | 7.23e-42 | 154 |
| MS.gene47820.t1 | MTR_3g461440 | 27.670 | 412 | 262 | 9 | 47 | 426 | 22 | 429 | 1.06e-41 | 154 |
| MS.gene47820.t1 | MTR_3g110430 | 26.180 | 466 | 288 | 14 | 7 | 428 | 16 | 469 | 2.49e-41 | 153 |
| MS.gene47820.t1 | MTR_3g461470 | 27.845 | 413 | 264 | 9 | 47 | 428 | 22 | 431 | 4.54e-41 | 152 |
| MS.gene47820.t1 | MTR_8g094290 | 27.941 | 408 | 261 | 7 | 49 | 426 | 32 | 436 | 7.72e-41 | 151 |
| MS.gene47820.t1 | MTR_1g007240 | 28.276 | 435 | 263 | 13 | 35 | 430 | 2 | 426 | 1.67e-40 | 150 |
| MS.gene47820.t1 | MTR_1g492640 | 30.137 | 365 | 224 | 11 | 1 | 349 | 1 | 350 | 3.35e-40 | 147 |
| MS.gene47820.t1 | MTR_1g492640 | 30.137 | 365 | 224 | 11 | 1 | 349 | 19 | 368 | 6.61e-40 | 147 |
| MS.gene47820.t1 | MTR_1g070470 | 27.200 | 375 | 255 | 9 | 48 | 414 | 22 | 386 | 1.23e-39 | 147 |
| MS.gene47820.t1 | MTR_3g088465 | 30.601 | 366 | 228 | 11 | 26 | 376 | 15 | 369 | 7.70e-39 | 145 |
| MS.gene47820.t1 | MTR_3g061390 | 26.959 | 434 | 278 | 10 | 25 | 426 | 3 | 429 | 1.56e-38 | 145 |
| MS.gene47820.t1 | MTR_5g096850 | 28.537 | 417 | 253 | 13 | 49 | 430 | 26 | 432 | 2.26e-38 | 144 |
| MS.gene47820.t1 | MTR_3g110420 | 26.712 | 438 | 275 | 14 | 26 | 426 | 4 | 432 | 9.31e-37 | 140 |
| MS.gene47820.t1 | MTR_2g031750 | 26.241 | 423 | 254 | 11 | 49 | 428 | 13 | 420 | 6.96e-36 | 137 |
| MS.gene47820.t1 | MTR_1g007180 | 25.806 | 434 | 267 | 12 | 35 | 428 | 2 | 420 | 8.01e-36 | 137 |
| MS.gene47820.t1 | MTR_3g461430 | 25.373 | 402 | 266 | 9 | 56 | 426 | 38 | 436 | 4.93e-35 | 136 |
| MS.gene47820.t1 | MTR_1g492640 | 29.814 | 322 | 206 | 8 | 120 | 429 | 1 | 314 | 5.13e-34 | 130 |
| MS.gene47820.t1 | MTR_3g461440 | 28.114 | 281 | 176 | 6 | 169 | 426 | 15 | 292 | 6.98e-30 | 118 |
| MS.gene47820.t1 | MTR_4g104510 | 25.000 | 396 | 263 | 13 | 30 | 416 | 32 | 402 | 1.92e-28 | 116 |
| MS.gene47820.t1 | MTR_4g104510 | 24.873 | 394 | 262 | 13 | 30 | 414 | 32 | 400 | 5.01e-28 | 115 |
| MS.gene47820.t1 | MTR_5g081630 | 28.532 | 361 | 240 | 12 | 76 | 430 | 1 | 349 | 8.94e-28 | 114 |
| MS.gene47820.t1 | MTR_2g031750 | 25.843 | 356 | 217 | 10 | 109 | 428 | 9 | 353 | 8.17e-26 | 108 |
| MS.gene47820.t1 | MTR_3g110420 | 27.219 | 338 | 216 | 12 | 26 | 342 | 4 | 332 | 1.01e-25 | 107 |
| MS.gene47820.t1 | MTR_1g492640 | 28.000 | 250 | 169 | 5 | 1 | 248 | 1 | 241 | 2.65e-22 | 95.9 |
| MS.gene47820.t1 | MTR_1g492640 | 28.000 | 250 | 169 | 5 | 1 | 248 | 19 | 259 | 1.00e-21 | 94.7 |
| MS.gene47820.t1 | MTR_1g007180 | 25.660 | 265 | 170 | 6 | 188 | 428 | 75 | 336 | 5.22e-19 | 88.6 |
| MS.gene47820.t1 | MTR_1g094620 | 26.328 | 433 | 277 | 18 | 6 | 420 | 103 | 511 | 8.79e-19 | 89.0 |
| MS.gene47820.t1 | MTR_1g094620 | 26.168 | 428 | 277 | 18 | 6 | 420 | 103 | 504 | 1.03e-18 | 89.0 |
| MS.gene47820.t1 | MTR_3g069960 | 26.100 | 341 | 225 | 12 | 94 | 425 | 72 | 394 | 1.99e-17 | 84.3 |
| MS.gene47820.t1 | MTR_3g069960 | 26.100 | 341 | 225 | 12 | 94 | 425 | 19 | 341 | 2.63e-17 | 83.6 |
| MS.gene47820.t1 | MTR_3g085800 | 65.306 | 49 | 17 | 0 | 382 | 430 | 4 | 52 | 3.51e-17 | 76.6 |
| MS.gene47820.t1 | MTR_5g017200 | 29.778 | 225 | 146 | 4 | 59 | 274 | 39 | 260 | 3.77e-17 | 81.6 |
| MS.gene47820.t1 | MTR_3g465510 | 23.256 | 430 | 295 | 13 | 12 | 430 | 1 | 406 | 6.42e-15 | 76.6 |
| MS.gene47820.t1 | MTR_7g010790 | 24.876 | 402 | 252 | 16 | 32 | 417 | 25 | 392 | 1.13e-14 | 75.9 |
| MS.gene47820.t1 | MTR_3g465440 | 21.891 | 402 | 282 | 12 | 38 | 430 | 35 | 413 | 1.25e-14 | 76.6 |
| MS.gene47820.t1 | MTR_8g467180 | 22.513 | 382 | 263 | 13 | 52 | 425 | 21 | 377 | 2.84e-14 | 74.7 |
| MS.gene47820.t1 | MTR_8g467190 | 23.171 | 410 | 266 | 16 | 26 | 424 | 4 | 375 | 2.86e-14 | 74.7 |
| MS.gene47820.t1 | MTR_7g062410 | 20.482 | 415 | 288 | 14 | 19 | 420 | 6 | 391 | 7.84e-14 | 73.2 |
| MS.gene47820.t1 | MTR_7g010750 | 24.874 | 398 | 249 | 15 | 38 | 416 | 24 | 390 | 1.06e-13 | 72.8 |
| MS.gene47820.t1 | MTR_3g033730 | 24.250 | 400 | 261 | 15 | 35 | 421 | 26 | 396 | 1.25e-13 | 72.8 |
| MS.gene47820.t1 | MTR_4g055637 | 27.322 | 183 | 116 | 5 | 257 | 429 | 168 | 343 | 2.62e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47820.t1 | AT5G40780 | 79.177 | 413 | 79 | 2 | 24 | 430 | 3 | 414 | 0.0 | 689 |
| MS.gene47820.t1 | AT1G48640 | 73.594 | 409 | 104 | 2 | 25 | 430 | 14 | 421 | 0.0 | 632 |
| MS.gene47820.t1 | AT5G40780 | 80.926 | 367 | 69 | 1 | 64 | 430 | 1 | 366 | 0.0 | 627 |
| MS.gene47820.t1 | AT5G40780 | 80.926 | 367 | 69 | 1 | 64 | 430 | 1 | 366 | 0.0 | 627 |
| MS.gene47820.t1 | AT1G24400 | 77.330 | 397 | 89 | 1 | 34 | 430 | 14 | 409 | 0.0 | 621 |
| MS.gene47820.t1 | AT1G67640 | 75.735 | 408 | 97 | 2 | 23 | 430 | 4 | 409 | 0.0 | 607 |
| MS.gene47820.t1 | AT1G61270 | 65.207 | 411 | 142 | 1 | 21 | 430 | 6 | 416 | 0.0 | 563 |
| MS.gene47820.t1 | AT3G01760 | 65.356 | 407 | 134 | 4 | 30 | 430 | 10 | 415 | 0.0 | 556 |
| MS.gene47820.t1 | AT1G25530 | 61.042 | 403 | 151 | 2 | 28 | 430 | 12 | 408 | 1.30e-174 | 496 |
| MS.gene47820.t1 | AT1G71680 | 56.835 | 417 | 173 | 3 | 20 | 430 | 1 | 416 | 3.13e-156 | 449 |
| MS.gene47820.t1 | AT1G71680 | 56.593 | 364 | 151 | 3 | 20 | 377 | 1 | 363 | 1.08e-142 | 412 |
| MS.gene47820.t1 | AT1G47670 | 38.404 | 401 | 236 | 5 | 40 | 430 | 85 | 484 | 8.33e-93 | 290 |
| MS.gene47820.t1 | AT4G35180 | 31.808 | 437 | 275 | 8 | 5 | 429 | 19 | 444 | 4.69e-72 | 234 |
| MS.gene47820.t1 | AT4G35180 | 34.304 | 309 | 191 | 3 | 5 | 310 | 19 | 318 | 2.49e-60 | 200 |
| MS.gene47820.t1 | AT1G10010 | 33.945 | 436 | 245 | 11 | 29 | 428 | 10 | 438 | 1.52e-58 | 199 |
| MS.gene47820.t1 | AT1G10010 | 33.945 | 436 | 245 | 11 | 29 | 428 | 11 | 439 | 1.52e-58 | 199 |
| MS.gene47820.t1 | AT1G58360 | 31.441 | 458 | 257 | 12 | 8 | 428 | 10 | 447 | 1.93e-51 | 180 |
| MS.gene47820.t1 | AT1G08230 | 30.569 | 422 | 271 | 11 | 23 | 429 | 2 | 416 | 1.85e-49 | 174 |
| MS.gene47820.t1 | AT5G41800 | 29.114 | 395 | 257 | 8 | 50 | 429 | 28 | 414 | 7.49e-49 | 172 |
| MS.gene47820.t1 | AT1G77380 | 30.716 | 433 | 252 | 12 | 32 | 426 | 15 | 437 | 7.22e-48 | 171 |
| MS.gene47820.t1 | AT5G49630 | 30.134 | 448 | 270 | 12 | 16 | 426 | 2 | 443 | 2.84e-46 | 166 |
| MS.gene47820.t1 | AT5G09220 | 29.369 | 412 | 254 | 9 | 49 | 426 | 46 | 454 | 5.99e-45 | 163 |
| MS.gene47820.t1 | AT1G44100 | 28.090 | 445 | 271 | 11 | 23 | 426 | 5 | 441 | 5.76e-44 | 160 |
| MS.gene47820.t1 | AT5G63850 | 28.398 | 412 | 258 | 8 | 49 | 426 | 19 | 427 | 1.75e-42 | 156 |
| MS.gene47820.t1 | AT5G23810 | 28.706 | 425 | 248 | 11 | 47 | 427 | 24 | 437 | 3.91e-40 | 149 |
| MS.gene47820.t1 | AT1G08230 | 31.579 | 323 | 201 | 10 | 120 | 429 | 1 | 316 | 2.78e-32 | 125 |
| MS.gene47820.t1 | AT1G08230 | 32.441 | 299 | 182 | 10 | 144 | 429 | 6 | 297 | 9.71e-31 | 121 |
| MS.gene47820.t1 | AT1G08230 | 32.441 | 299 | 182 | 10 | 144 | 429 | 6 | 297 | 9.71e-31 | 121 |
| MS.gene47820.t1 | AT1G08230 | 32.441 | 299 | 182 | 10 | 144 | 429 | 6 | 297 | 9.71e-31 | 121 |
| MS.gene47820.t1 | AT3G55740 | 27.791 | 421 | 265 | 16 | 1 | 414 | 1 | 389 | 1.59e-29 | 119 |
| MS.gene47820.t1 | AT2G36590 | 27.160 | 405 | 270 | 15 | 37 | 430 | 12 | 402 | 3.08e-29 | 119 |
| MS.gene47820.t1 | AT2G39890 | 26.448 | 397 | 266 | 14 | 39 | 425 | 20 | 400 | 1.27e-26 | 111 |
| MS.gene47820.t1 | AT2G39890 | 26.448 | 397 | 266 | 14 | 39 | 425 | 20 | 400 | 1.27e-26 | 111 |
| MS.gene47820.t1 | AT3G55740 | 28.406 | 345 | 229 | 12 | 76 | 414 | 1 | 333 | 1.39e-26 | 110 |
| MS.gene47820.t1 | AT3G55740 | 28.406 | 345 | 229 | 12 | 76 | 414 | 1 | 333 | 1.39e-26 | 110 |
| MS.gene47820.t1 | AT5G23810 | 28.528 | 326 | 197 | 9 | 47 | 347 | 24 | 338 | 1.59e-26 | 110 |
| MS.gene47820.t1 | AT2G39890 | 26.611 | 357 | 239 | 12 | 76 | 425 | 1 | 341 | 2.59e-25 | 107 |
| MS.gene47820.t1 | AT2G36590 | 28.344 | 314 | 204 | 13 | 37 | 342 | 12 | 312 | 2.01e-20 | 92.0 |
| MS.gene47820.t1 | AT5G15240 | 25.240 | 416 | 246 | 17 | 25 | 416 | 9 | 383 | 5.38e-18 | 85.9 |
| MS.gene47820.t1 | AT5G23810 | 27.686 | 242 | 143 | 7 | 47 | 265 | 24 | 256 | 1.49e-15 | 77.0 |
| MS.gene47820.t1 | AT5G02180 | 22.739 | 387 | 266 | 11 | 43 | 420 | 151 | 513 | 2.85e-14 | 75.1 |
| MS.gene47820.t1 | AT5G02180 | 22.739 | 387 | 266 | 11 | 43 | 420 | 151 | 513 | 2.85e-14 | 75.1 |
| MS.gene47820.t1 | AT5G23810 | 25.333 | 225 | 137 | 7 | 25 | 230 | 5 | 217 | 3.64e-12 | 66.2 |
| MS.gene47820.t1 | AT5G23810 | 25.333 | 225 | 137 | 7 | 25 | 230 | 5 | 217 | 3.64e-12 | 66.2 |
Find 113 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTCCCTGTTGCTCTTAT+TGG | 0.168322 | 2.1:-3338606 | MS.gene47820:CDS |
| TTCAATTTCTTCAGTGCTTT+AGG | 0.228996 | 2.1:-3338765 | MS.gene47820:CDS |
| GCTTGTCTTGGTTCGCAAAC+TGG | 0.259205 | 2.1:-3337785 | MS.gene47820:CDS |
| GGAATAACCTTCCCATTCTT+TGG | 0.269371 | 2.1:-3338009 | MS.gene47820:CDS |
| ATTTCCCTGTTGCTCTTATT+GGG | 0.271137 | 2.1:-3338605 | MS.gene47820:CDS |
| CCATTCTTTGGTGCCCTCCT+TGG | 0.281653 | 2.1:-3337997 | MS.gene47820:CDS |
| TTTGTTGTCATTCATGTTAT+AGG | 0.284943 | 2.1:-3338498 | MS.gene47820:CDS |
| CTGTTGCTCTTATTGGGTAT+TGG | 0.300006 | 2.1:-3338599 | MS.gene47820:CDS |
| CAAGACAAGCTAAACCTCTT+AGG | 0.301943 | 2.1:+3337798 | None:intergenic |
| CCCAACTTCAACTCCATTGC+TGG | 0.312413 | 2.1:-3340101 | MS.gene47820:CDS |
| CTTATTGGGTATTGGATGTT+TGG | 0.317962 | 2.1:-3338591 | MS.gene47820:CDS |
| TGCATTCCTTGAAGAAGTTA+TGG | 0.330789 | 2.1:+3341990 | None:intergenic |
| CTTCTTCAAGGAATGCAAAA+TGG | 0.331015 | 2.1:-3341984 | MS.gene47820:CDS |
| AAGAAATTGAAAACAGTTCC+TGG | 0.370996 | 2.1:+3338777 | None:intergenic |
| TAATCACCCTCTACACTCTA+TGG | 0.375402 | 2.1:-3340397 | MS.gene47820:CDS |
| CATTGCGAACAACAAATCTT+AGG | 0.383519 | 2.1:+3338295 | None:intergenic |
| AACAAAAGAAAATTGATGAT+TGG | 0.385860 | 2.1:-3342017 | MS.gene47820:CDS |
| CAATACCCAATAAGAGCAAC+AGG | 0.389191 | 2.1:+3338600 | None:intergenic |
| TGCTTCTTCAGAGGCTGAAA+AGG | 0.398966 | 2.1:-3342235 | MS.gene47820:CDS |
| TTGTAGCCATAGGCCACATC+TGG | 0.403065 | 2.1:+3338813 | None:intergenic |
| GAGATGCATGAAATGGTTCC+AGG | 0.408422 | 2.1:-3340365 | MS.gene47820:CDS |
| TGTAGCTTCCTTGCATTATG+TGG | 0.411632 | 2.1:-3337836 | MS.gene47820:intron |
| TTGGAGAAAAGCTTGGACTC+TGG | 0.412306 | 2.1:-3340301 | MS.gene47820:CDS |
| TCAGCCTCTGAAGAAGCAAT+TGG | 0.414783 | 2.1:+3342240 | None:intergenic |
| GGCTTCCCATAACTTCTTCA+AGG | 0.414953 | 2.1:-3341996 | MS.gene47820:CDS |
| TCATGTTATAGGAAGCTATC+AGG | 0.416323 | 2.1:-3338487 | MS.gene47820:intron |
| TCCTCTCCACATTGGACCCT+TGG | 0.420922 | 2.1:+3338662 | None:intergenic |
| CTCCACATTGGACCCTTGGA+TGG | 0.422755 | 2.1:+3338666 | None:intergenic |
| GCATTCCTTGAAGAAGTTAT+GGG | 0.423856 | 2.1:+3341991 | None:intergenic |
| CCATCTGCCATGGCAAGTCT+TGG | 0.434758 | 2.1:-3341904 | MS.gene47820:CDS |
| CCAAGGAGGGCACCAAAGAA+TGG | 0.436204 | 2.1:+3337997 | None:intergenic |
| CTAAGAGGTTTAGCTTGTCT+TGG | 0.437451 | 2.1:-3337797 | MS.gene47820:CDS |
| GGACCCTTGGATGGTTTCTC+CGG | 0.438031 | 2.1:+3338675 | None:intergenic |
| CTTCTCTTAATAAACCTACT+TGG | 0.442717 | 2.1:-3338542 | MS.gene47820:CDS |
| GACATTGTTTACATGGTCAC+CGG | 0.442865 | 2.1:-3340239 | MS.gene47820:CDS |
| CTCCATTGCTGGTATCTCCT+TGG | 0.443891 | 2.1:-3340090 | MS.gene47820:CDS |
| CTTGTCTTGGTTCGCAAACT+GGG | 0.451762 | 2.1:-3337784 | None:intergenic |
| GATGGTTTCTCCGGTGTGGA+CGG | 0.451778 | 2.1:+3338684 | None:intergenic |
| TTCAGCATTCACAATGTTTG+TGG | 0.454604 | 2.1:-3338031 | MS.gene47820:intron |
| ATGGTTTCTCCGGTGTGGAC+GGG | 0.455777 | 2.1:+3338685 | None:intergenic |
| ACCAGCAATGGAGTTGAAGT+TGG | 0.460631 | 2.1:+3340100 | None:intergenic |
| CTCCAACACCACATTGTGTC+CGG | 0.463600 | 2.1:+3338722 | None:intergenic |
| CTGCAGCAATCATGTCTTTG+AGG | 0.471568 | 2.1:-3340067 | MS.gene47820:intron |
| ATGAAATGGTTCCAGGAAAA+CGG | 0.476078 | 2.1:-3340358 | MS.gene47820:CDS |
| TGGAGTTGAAGTTGGGAAGA+TGG | 0.477812 | 2.1:+3340108 | None:intergenic |
| ATGTCGAATTGCAGGGGTCC+TGG | 0.479412 | 2.1:-3340446 | MS.gene47820:intron |
| GGAGTTGAAGTTGGGAAGAT+GGG | 0.488377 | 2.1:+3340109 | None:intergenic |
| TCAGCATTCACAATGTTTGT+GGG | 0.488938 | 2.1:-3338030 | MS.gene47820:intron |
| GGACTTACAAAATATGTTGT+GGG | 0.491845 | 2.1:+3337949 | None:intergenic |
| CCAAGACTTGCCATGGCAGA+TGG | 0.495959 | 2.1:+3341904 | None:intergenic |
| CAAGGAGGGCACCAAAGAAT+GGG | 0.496713 | 2.1:+3337998 | None:intergenic |
| CCTCTACACTCTATGGCAAA+TGG | 0.497407 | 2.1:-3340390 | MS.gene47820:CDS |
| TTGCTATTTACAAACCTAAG+AGG | 0.497836 | 2.1:-3337812 | MS.gene47820:CDS |
| AACAACAAATCTTAGGAGTC+GGG | 0.497913 | 2.1:+3338302 | None:intergenic |
| TTTGACAGATACCATGAGTT+GGG | 0.500029 | 2.1:-3340335 | MS.gene47820:CDS |
| TGACATGATTGAGACCGTAA+TGG | 0.504825 | 2.1:-3338349 | MS.gene47820:CDS |
| GAGTTGGGACAAGAAGCATT+TGG | 0.508176 | 2.1:-3340320 | MS.gene47820:CDS |
| GAAGCATTTGGAGAAAAGCT+TGG | 0.510904 | 2.1:-3340308 | MS.gene47820:CDS |
| TGTTGGAGACTCAGTTCCCA+TGG | 0.511962 | 2.1:+3342272 | None:intergenic |
| TGGACTTACAAAATATGTTG+TGG | 0.515751 | 2.1:+3337948 | None:intergenic |
| CACAACGTTACTGCCATGGT+TGG | 0.517108 | 2.1:-3341946 | MS.gene47820:CDS |
| CCAGCAATGGAGTTGAAGTT+GGG | 0.520549 | 2.1:+3340101 | None:intergenic |
| GTTGTTCGCAATGTTTATGT+TGG | 0.530022 | 2.1:-3338285 | MS.gene47820:intron |
| GCTGCAACTATAAGCCAAGT+AGG | 0.535757 | 2.1:+3338528 | None:intergenic |
| ACATTGTTTACATGGTCACC+GGG | 0.538739 | 2.1:-3340238 | MS.gene47820:CDS |
| CTTGAGTCTTCCATCTGCCA+TGG | 0.541643 | 2.1:-3341914 | MS.gene47820:CDS |
| ATGCTTCTTGTCCCAACTCA+TGG | 0.547647 | 2.1:+3340324 | None:intergenic |
| GTTCAACCAGATGTGGCCTA+TGG | 0.548195 | 2.1:-3338819 | MS.gene47820:CDS |
| GAACAACAAATCTTAGGAGT+CGG | 0.552204 | 2.1:+3338301 | None:intergenic |
| AGTTGTGGCTTTGTAGCCAT+AGG | 0.553663 | 2.1:+3338803 | None:intergenic |
| TGGTGTGGACATTGTTTACA+TGG | 0.554021 | 2.1:-3340246 | MS.gene47820:CDS |
| AATGGTTGAGATGCATGAAA+TGG | 0.555074 | 2.1:-3340372 | MS.gene47820:CDS |
| AGACATGATTGCTGCAGCCA+AGG | 0.555144 | 2.1:+3340073 | None:intergenic |
| CTGCCATGGCAAGTCTTGGA+TGG | 0.557557 | 2.1:-3341900 | MS.gene47820:intron |
| GTAGTTACTCAACAATTGCA+TGG | 0.558837 | 2.1:-3338863 | MS.gene47820:intron |
| GTTTGACAGATACCATGAGT+TGG | 0.571800 | 2.1:-3340336 | MS.gene47820:CDS |
| AACAGTTCCTGGTGTAGTTG+TGG | 0.571899 | 2.1:+3338788 | None:intergenic |
| CAACAATTGATATGTGAAGT+TGG | 0.573630 | 2.1:-3340266 | MS.gene47820:CDS |
| AATAAAACTCCTCTCCACAT+TGG | 0.575187 | 2.1:+3338654 | None:intergenic |
| TTACTCAACAATTGCATGGG+TGG | 0.581664 | 2.1:-3338859 | MS.gene47820:CDS |
| ACAAATCTTAGGAGTCGGGT+TGG | 0.583916 | 2.1:+3338306 | None:intergenic |
| AAAACCAATTGCTTCTTCAG+AGG | 0.589072 | 2.1:-3342244 | MS.gene47820:CDS |
| GTTACTGCCATGGTTGGAGC+TGG | 0.590710 | 2.1:-3341940 | MS.gene47820:CDS |
| CTTGGATGGTTTCTCCGGTG+TGG | 0.592081 | 2.1:+3338680 | None:intergenic |
| ACTTCACATATCAATTGTTG+TGG | 0.594166 | 2.1:+3340269 | None:intergenic |
| CATTTGCCATAGAGTGTAGA+GGG | 0.594361 | 2.1:+3340391 | None:intergenic |
| CAAGACACCAGCTCCAACCA+TGG | 0.596093 | 2.1:+3341933 | None:intergenic |
| TAGTTACTCAACAATTGCAT+GGG | 0.600051 | 2.1:-3338862 | MS.gene47820:CDS |
| TGCCGGACACAATGTGGTGT+TGG | 0.600214 | 2.1:-3338724 | MS.gene47820:CDS |
| TACAAAGCCACAACTACACC+AGG | 0.601821 | 2.1:-3338795 | MS.gene47820:CDS |
| GATGTTGCATTTGCCTATGC+CGG | 0.602926 | 2.1:-3338741 | MS.gene47820:CDS |
| AAAGGGAGTTCAACCAGATG+TGG | 0.615250 | 2.1:-3338826 | MS.gene47820:CDS |
| CCATTTGCCATAGAGTGTAG+AGG | 0.615329 | 2.1:+3340390 | None:intergenic |
| ATAGCAAGCCACATAATGCA+AGG | 0.617411 | 2.1:+3337828 | None:intergenic |
| AAAATTAGAATCACCACACC+AGG | 0.621042 | 2.1:+3340428 | None:intergenic |
| ATACCATCCAAGACTTGCCA+TGG | 0.631568 | 2.1:+3341897 | None:intergenic |
| GAATTGCAGGGGTCCTGGTG+TGG | 0.635436 | 2.1:-3340441 | MS.gene47820:intron |
| ATTGTTTACATGGTCACCGG+GGG | 0.638235 | 2.1:-3340236 | MS.gene47820:CDS |
| ATTGATATGTGAAGTTGGTG+TGG | 0.641517 | 2.1:-3340261 | MS.gene47820:CDS |
| TCCAAGGGTCCAATGTGGAG+AGG | 0.647648 | 2.1:-3338663 | MS.gene47820:CDS |
| CACCACATTGTGTCCGGCAT+AGG | 0.647925 | 2.1:+3338728 | None:intergenic |
| GGCAAGAATAAAATGAACAG+AGG | 0.650976 | 2.1:+3340130 | None:intergenic |
| AGCAACAATCCCGTCCACAC+CGG | 0.654369 | 2.1:-3338694 | MS.gene47820:CDS |
| CTTCAAGGAATGCAAAATGG+TGG | 0.654515 | 2.1:-3341981 | MS.gene47820:CDS |
| CACACCGGAGAAACCATCCA+AGG | 0.663681 | 2.1:-3338679 | MS.gene47820:CDS |
| AGCCAAGGAGATACCAGCAA+TGG | 0.663690 | 2.1:+3340088 | None:intergenic |
| CATTGTTTACATGGTCACCG+GGG | 0.672585 | 2.1:-3340237 | MS.gene47820:CDS |
| TTTCTCAGCACAAGAACCAG+AGG | 0.673739 | 2.1:-3342208 | MS.gene47820:intron |
| GAGGGCACCAAAGAATGGGA+AGG | 0.676285 | 2.1:+3338002 | None:intergenic |
| AACCATCCAAGGGTCCAATG+TGG | 0.683222 | 2.1:-3338668 | MS.gene47820:CDS |
| ACACCGGAGAAACCATCCAA+GGG | 0.697058 | 2.1:-3338678 | MS.gene47820:CDS |
| TGCCTATGCCGGACACAATG+TGG | 0.720388 | 2.1:-3338730 | MS.gene47820:CDS |
| AATACCCAATAAGAGCAACA+GGG | 0.735246 | 2.1:+3338601 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTATATTTTTTAAA+TGG | + | chr2.1:3338660-3338679 | None:intergenic | 0.0% |
| !! | ATTTGAATATTAATGAAATA+TGG | + | chr2.1:3340633-3340652 | None:intergenic | 10.0% |
| !! | TTTGTAAAAAAAAAAAACAA+GGG | + | chr2.1:3338414-3338433 | None:intergenic | 10.0% |
| !!! | AATTTAACTTCTAAAAAAAA+AGG | - | chr2.1:3338496-3338515 | MS.gene47820:CDS | 10.0% |
| !!! | ACTTTAAAAAAAAAAAACTA+AGG | - | chr2.1:3339222-3339241 | MS.gene47820:intron | 10.0% |
| !!! | ATTTATATTTTTTAAATGGT+TGG | + | chr2.1:3338656-3338675 | None:intergenic | 10.0% |
| !!! | TATATAATATAAAAGTACAA+TGG | - | chr2.1:3340990-3341009 | MS.gene47820:intron | 10.0% |
| !! | AAATAATAATAATACACCTT+TGG | + | chr2.1:3338690-3338709 | None:intergenic | 15.0% |
| !! | AGAAAATATTTAAGAAAAGA+AGG | + | chr2.1:3340056-3340075 | None:intergenic | 15.0% |
| !! | ATAATATTATGTTATACCAT+TGG | + | chr2.1:3340317-3340336 | None:intergenic | 15.0% |
| !! | CCAAAAAAAAAAAATTGATT+CGG | - | chr2.1:3340872-3340891 | MS.gene47820:intron | 15.0% |
| !! | GTTTGTAAAAAAAAAAAACA+AGG | + | chr2.1:3338415-3338434 | None:intergenic | 15.0% |
| !!! | GAAAATAGATTTTTTTTTTG+TGG | + | chr2.1:3341115-3341134 | None:intergenic | 15.0% |
| !!! | TAAAATATCCAATTTTAGAA+AGG | + | chr2.1:3341802-3341821 | None:intergenic | 15.0% |
| !!! | TATTTTTTAACTAAACTTGA+TGG | - | chr2.1:3341143-3341162 | MS.gene47820:intron | 15.0% |
| !! | ACATAATATATGTAAGATCA+GGG | - | chr2.1:3341073-3341092 | MS.gene47820:intron | 20.0% |
| !! | ACTATTCACTTATTAGAAAA+TGG | - | chr2.1:3338460-3338479 | MS.gene47820:intron | 20.0% |
| !! | AGTTTAAACAATAACCTAAA+CGG | + | chr2.1:3338443-3338462 | None:intergenic | 20.0% |
| !! | CAATAAACACTTACTTAATT+AGG | + | chr2.1:3338833-3338852 | None:intergenic | 20.0% |
| !! | CTAATTAAGTAAGTGTTTAT+TGG | - | chr2.1:3338831-3338850 | MS.gene47820:CDS | 20.0% |
| !! | GTTCATTATGCATTATTTAT+AGG | - | chr2.1:3338868-3338887 | MS.gene47820:intron | 20.0% |
| !! | TACATAATATATGTAAGATC+AGG | - | chr2.1:3341072-3341091 | MS.gene47820:intron | 20.0% |
| !! | TTCTCAAATTTCAAAACTAT+TGG | - | chr2.1:3338770-3338789 | MS.gene47820:CDS | 20.0% |
| !! | TTTAGTAGTATTTATCAACA+TGG | + | chr2.1:3340120-3340139 | None:intergenic | 20.0% |
| !!! | AAACTAGAATTTTTCAAACA+AGG | + | chr2.1:3338307-3338326 | None:intergenic | 20.0% |
| !!! | AACAAAAGAAAATTGATGAT+TGG | - | chr2.1:3338038-3338057 | MS.gene47820:intron | 20.0% |
| !!! | AACTAGAATTTTTCAAACAA+GGG | + | chr2.1:3338306-3338325 | None:intergenic | 20.0% |
| !!! | AGTTTTGAAATTTGAGAATT+GGG | + | chr2.1:3338768-3338787 | None:intergenic | 20.0% |
| !!! | ATCAAGTTTGATTTTAATCA+TGG | + | chr2.1:3338901-3338920 | None:intergenic | 20.0% |
| !!! | CCGAATCAATTTTTTTTTTT+TGG | + | chr2.1:3340875-3340894 | None:intergenic | 20.0% |
| !!! | TAGTTTTGAAATTTGAGAAT+TGG | + | chr2.1:3338769-3338788 | None:intergenic | 20.0% |
| !!! | TCAATTTTTTTTTTTTGGTC+AGG | + | chr2.1:3340870-3340889 | None:intergenic | 20.0% |
| !!! | TGTTGATAAATACTACTAAA+AGG | - | chr2.1:3340120-3340139 | MS.gene47820:CDS | 20.0% |
| ! | ACAATGCATTATTATATGCA+GGG | - | chr2.1:3340778-3340797 | MS.gene47820:intron | 25.0% |
| ! | ACTAAAAGGTAAATAGAGAT+TGG | - | chr2.1:3340134-3340153 | MS.gene47820:CDS | 25.0% |
| ! | ACTGCAAAAAATTCATGATT+TGG | - | chr2.1:3339848-3339867 | MS.gene47820:intron | 25.0% |
| ! | ATATTCGACTTTATTGAGAA+CGG | + | chr2.1:3340550-3340569 | None:intergenic | 25.0% |
| ! | ATTAGAAAATGGATGTTCAT+GGG | - | chr2.1:3338471-3338490 | MS.gene47820:intron | 25.0% |
| ! | CATAATATATGTAAGATCAG+GGG | - | chr2.1:3341074-3341093 | MS.gene47820:intron | 25.0% |
| ! | TAAAGAAGAATAGAAACTTG+CGG | + | chr2.1:3338721-3338740 | None:intergenic | 25.0% |
| ! | TAAATAAAAAAAGTGGCCAA+AGG | - | chr2.1:3338671-3338690 | MS.gene47820:CDS | 25.0% |
| ! | TATTAGAAAATGGATGTTCA+TGG | - | chr2.1:3338470-3338489 | MS.gene47820:intron | 25.0% |
| ! | TTATATAAGCTCATCAATAG+AGG | - | chr2.1:3340474-3340493 | MS.gene47820:intron | 25.0% |
| ! | TTTAGGTGTCTAAATTGATT+CGG | - | chr2.1:3340722-3340741 | MS.gene47820:intron | 25.0% |
| !! | AGCTAAACAAATAGCAATTT+TGG | + | chr2.1:3341981-3342000 | None:intergenic | 25.0% |
| !! | ATCAAACCATTTTCATAAGT+TGG | - | chr2.1:3338919-3338938 | MS.gene47820:intron | 25.0% |
| !! | TGGTGATTCTAATTTTATCA+TGG | - | chr2.1:3339634-3339653 | MS.gene47820:intron | 25.0% |
| !! | TTTGTTGTCATTCATGTTAT+AGG | - | chr2.1:3341557-3341576 | MS.gene47820:intron | 25.0% |
| !!! | ATTTTTTTGCGTTAACACTT+CGG | + | chr2.1:3339511-3339530 | None:intergenic | 25.0% |
| !!! | TATCGCGATACAATTTTTTT+AGG | - | chr2.1:3339051-3339070 | MS.gene47820:intron | 25.0% |
| !!! | TTTTAAATGGTTGGTATAGA+AGG | + | chr2.1:3338647-3338666 | None:intergenic | 25.0% |
| AAACGACCAAATTGAAGAAT+TGG | + | chr2.1:3340180-3340199 | None:intergenic | 30.0% | |
| AAGAAATTGAAAACAGTTCC+TGG | + | chr2.1:3341281-3341300 | None:intergenic | 30.0% | |
| AATATGAGTGACCATATGAT+TGG | - | chr2.1:3338328-3338347 | MS.gene47820:CDS | 30.0% | |
| ACCTTATAAGGTGAATAAGT+GGG | + | chr2.1:3340827-3340846 | None:intergenic | 30.0% | |
| ACTTCACATATCAATTGTTG+TGG | + | chr2.1:3339789-3339808 | None:intergenic | 30.0% | |
| CAACAATTGATATGTGAAGT+TGG | - | chr2.1:3339789-3339808 | MS.gene47820:intron | 30.0% | |
| CAATGCATTATTATATGCAG+GGG | - | chr2.1:3340779-3340798 | MS.gene47820:intron | 30.0% | |
| CTCATATTCTCATACTTGTT+AGG | + | chr2.1:3338261-3338280 | None:intergenic | 30.0% | |
| CTTCTCTTAATAAACCTACT+TGG | - | chr2.1:3341513-3341532 | MS.gene47820:intron | 30.0% | |
| GACAATGCATTATTATATGC+AGG | - | chr2.1:3340777-3340796 | MS.gene47820:intron | 30.0% | |
| GGACTTACAAAATATGTTGT+GGG | + | chr2.1:3342109-3342128 | None:intergenic | 30.0% | |
| GGGATTTGACATGTAATTTA+CGG | + | chr2.1:3338748-3338767 | None:intergenic | 30.0% | |
| TAGCTACCAACTTATGAAAA+TGG | + | chr2.1:3338928-3338947 | None:intergenic | 30.0% | |
| TAGTTACTCAACAATTGCAT+GGG | - | chr2.1:3341193-3341212 | MS.gene47820:intron | 30.0% | |
| TATGTTGTTAAGTTTACCTC+TGG | + | chr2.1:3337866-3337885 | None:intergenic | 30.0% | |
| TATTACCTCTCGAACAAATT+GGG | - | chr2.1:3339346-3339365 | MS.gene47820:intron | 30.0% | |
| TATTCGACTTTATTGAGAAC+GGG | + | chr2.1:3340549-3340568 | None:intergenic | 30.0% | |
| TCAAACTTGTACCAATCATA+TGG | + | chr2.1:3338342-3338361 | None:intergenic | 30.0% | |
| TCAAATTGGTCACAATATGT+GGG | + | chr2.1:3340699-3340718 | None:intergenic | 30.0% | |
| TCATCAATAACGAATTGTTC+AGG | - | chr2.1:3339388-3339407 | MS.gene47820:intron | 30.0% | |
| TCTTCAATTTGGTCGTTTAA+TGG | - | chr2.1:3340182-3340201 | MS.gene47820:CDS | 30.0% | |
| TGAAAATCATATAACCTTCC+CGG | - | chr2.1:3339284-3339303 | MS.gene47820:intron | 30.0% | |
| TGGACTTACAAAATATGTTG+TGG | + | chr2.1:3342110-3342129 | None:intergenic | 30.0% | |
| TGTGAAGAATCATATGCAAA+TGG | + | chr2.1:3341617-3341636 | None:intergenic | 30.0% | |
| TTCAATTTCTTCAGTGCTTT+AGG | - | chr2.1:3341290-3341309 | MS.gene47820:intron | 30.0% | |
| ! | ATAGAGACTTTAGAAAGACT+TGG | - | chr2.1:3340392-3340411 | MS.gene47820:CDS | 30.0% |
| ! | ATTTCTGGACTAAAGTCAAA+TGG | + | chr2.1:3340967-3340986 | None:intergenic | 30.0% |
| ! | ATTTTATCGTTATCCGATGA+TGG | - | chr2.1:3341910-3341929 | MS.gene47820:CDS | 30.0% |
| ! | GATTGGATTGTTCTTTTAGT+CGG | + | chr2.1:3340518-3340537 | None:intergenic | 30.0% |
| ! | TTTTACAATGTCGAATTGCA+GGG | - | chr2.1:3339602-3339621 | MS.gene47820:intron | 30.0% |
| !! | AAGTCTTTCTAAAGTCTCTA+TGG | + | chr2.1:3340393-3340412 | None:intergenic | 30.0% |
| !! | AATTTTTCAAACAAGGGTTG+AGG | + | chr2.1:3338300-3338319 | None:intergenic | 30.0% |
| !! | ATTCTAGAACTAGAAGTTCA+TGG | - | chr2.1:3338225-3338244 | MS.gene47820:intron | 30.0% |
| !! | ATTTTTCAAACAAGGGTTGA+GGG | + | chr2.1:3338299-3338318 | None:intergenic | 30.0% |
| !! | CAATTTTGAAGATGATGTGT+TGG | - | chr2.1:3340262-3340281 | MS.gene47820:CDS | 30.0% |
| !! | GAACTTCTAGTTCTAGAATA+CGG | + | chr2.1:3338224-3338243 | None:intergenic | 30.0% |
| !! | TTGCTATTTACAAACCTAAG+AGG | - | chr2.1:3342243-3342262 | MS.gene47820:CDS | 30.0% |
| !!! | ACGCAATTTTTTGACCATTA+CGG | + | chr2.1:3341723-3341742 | None:intergenic | 30.0% |
| !!! | ATATTTTAGCTCAGTTGGTA+GGG | - | chr2.1:3341045-3341064 | MS.gene47820:intron | 30.0% |
| !!! | ATTCCTGGATGAACATTTTT+TGG | - | chr2.1:3339425-3339444 | MS.gene47820:intron | 30.0% |
| !!! | CAATCATATTTTAGCTCAGT+TGG | - | chr2.1:3341040-3341059 | MS.gene47820:intron | 30.0% |
| !!! | GCAATTGGTTTTTCATTTGT+TGG | + | chr2.1:3337803-3337822 | None:intergenic | 30.0% |
| AAAACCAATTGCTTCTTCAG+AGG | - | chr2.1:3337811-3337830 | MS.gene47820:CDS | 35.0% | |
| AAAATTAGAATCACCACACC+AGG | + | chr2.1:3339630-3339649 | None:intergenic | 35.0% | |
| AACAACAAATCTTAGGAGTC+GGG | + | chr2.1:3341756-3341775 | None:intergenic | 35.0% | |
| AACAATAACCTAAACGGTGT+TGG | + | chr2.1:3338437-3338456 | None:intergenic | 35.0% | |
| AAGCTATCAGGTATGTATGA+TGG | - | chr2.1:3341580-3341599 | MS.gene47820:intron | 35.0% | |
| AATAAAACTCCTCTCCACAT+TGG | + | chr2.1:3341404-3341423 | None:intergenic | 35.0% | |
| AATACCCAATAAGAGCAACA+GGG | + | chr2.1:3341457-3341476 | None:intergenic | 35.0% | |
| AATGGTTGAGATGCATGAAA+TGG | - | chr2.1:3339683-3339702 | MS.gene47820:intron | 35.0% | |
| ACCACTAATTTGACATCTGA+AGG | - | chr2.1:3339543-3339562 | MS.gene47820:intron | 35.0% | |
| AGACACCTAAAACGTCAAAT+TGG | + | chr2.1:3340713-3340732 | None:intergenic | 35.0% | |
| AGACGAAATTTAAATCACCC+GGG | + | chr2.1:3339305-3339324 | None:intergenic | 35.0% | |
| AGTTATCAAGTACCTTACCT+TGG | - | chr2.1:3340354-3340373 | MS.gene47820:CDS | 35.0% | |
| ATGAAATGGTTCCAGGAAAA+CGG | - | chr2.1:3339697-3339716 | MS.gene47820:intron | 35.0% | |
| ATGGGTGGCTTCATTAAAAA+AGG | - | chr2.1:3341211-3341230 | MS.gene47820:intron | 35.0% | |
| ATTATTATATGCAGGGGTTG+GGG | - | chr2.1:3340785-3340804 | MS.gene47820:intron | 35.0% | |
| ATTTCCCTGTTGCTCTTATT+GGG | - | chr2.1:3341450-3341469 | MS.gene47820:intron | 35.0% | |
| CACCTTATAAGGTGAATAAG+TGG | + | chr2.1:3340828-3340847 | None:intergenic | 35.0% | |
| CATTATTATATGCAGGGGTT+GGG | - | chr2.1:3340784-3340803 | MS.gene47820:intron | 35.0% | |
| CATTGCGAACAACAAATCTT+AGG | + | chr2.1:3341763-3341782 | None:intergenic | 35.0% | |
| CCTTATAAGGTGAATAAGTG+GGG | + | chr2.1:3340826-3340845 | None:intergenic | 35.0% | |
| CTATTACCTCTCGAACAAAT+TGG | - | chr2.1:3339345-3339364 | MS.gene47820:intron | 35.0% | |
| CTTCTTCAAGGAATGCAAAA+TGG | - | chr2.1:3338071-3338090 | MS.gene47820:intron | 35.0% | |
| GAAAATCATATAACCTTCCC+GGG | - | chr2.1:3339285-3339304 | MS.gene47820:intron | 35.0% | |
| GAACAACAAATCTTAGGAGT+CGG | + | chr2.1:3341757-3341776 | None:intergenic | 35.0% | |
| GAGAATCTAAGTTTGATTCC+TGG | - | chr2.1:3339410-3339429 | MS.gene47820:intron | 35.0% | |
| GAGACGAAATTTAAATCACC+CGG | + | chr2.1:3339306-3339325 | None:intergenic | 35.0% | |
| GCATTCCTTGAAGAAGTTAT+GGG | + | chr2.1:3338067-3338086 | None:intergenic | 35.0% | |
| GGCAAGAATAAAATGAACAG+AGG | + | chr2.1:3339928-3339947 | None:intergenic | 35.0% | |
| GTAGTTACTCAACAATTGCA+TGG | - | chr2.1:3341192-3341211 | MS.gene47820:intron | 35.0% | |
| GTCAAATTGGTCACAATATG+TGG | + | chr2.1:3340700-3340719 | None:intergenic | 35.0% | |
| GTCTCAATCATGTCAAAAAC+AGG | + | chr2.1:3341701-3341720 | None:intergenic | 35.0% | |
| TAGCGACCAATTCTTCAATT+TGG | - | chr2.1:3340171-3340190 | MS.gene47820:CDS | 35.0% | |
| TATTTCCCTGTTGCTCTTAT+TGG | - | chr2.1:3341449-3341468 | MS.gene47820:intron | 35.0% | |
| TCAGCATTCACAATGTTTGT+GGG | - | chr2.1:3342025-3342044 | MS.gene47820:CDS | 35.0% | |
| TCATGTTATAGGAAGCTATC+AGG | - | chr2.1:3341568-3341587 | MS.gene47820:intron | 35.0% | |
| TCCTTCAGATGTCAAATTAG+TGG | + | chr2.1:3339547-3339566 | None:intergenic | 35.0% | |
| TGACCAAAAAATGTTCATCC+AGG | + | chr2.1:3339431-3339450 | None:intergenic | 35.0% | |
| TGCATTCCTTGAAGAAGTTA+TGG | + | chr2.1:3338068-3338087 | None:intergenic | 35.0% | |
| TGGCTAGAATTCACCTTATA+AGG | + | chr2.1:3340839-3340858 | None:intergenic | 35.0% | |
| TGGGTGGCTTCATTAAAAAA+GGG | - | chr2.1:3341212-3341231 | MS.gene47820:intron | 35.0% | |
| TTATGAGAGAGCCAAAATCA+TGG | - | chr2.1:3340288-3340307 | MS.gene47820:CDS | 35.0% | |
| TTCAGCATTCACAATGTTTG+TGG | - | chr2.1:3342024-3342043 | MS.gene47820:CDS | 35.0% | |
| TTTACAAACCAACACCGTTT+AGG | - | chr2.1:3338426-3338445 | MS.gene47820:intron | 35.0% | |
| TTTACAATGTCGAATTGCAG+GGG | - | chr2.1:3339603-3339622 | MS.gene47820:intron | 35.0% | |
| TTTGACAGATACCATGAGTT+GGG | - | chr2.1:3339720-3339739 | MS.gene47820:intron | 35.0% | |
| ! | ACCATTGGTATCCATGATTT+TGG | + | chr2.1:3340302-3340321 | None:intergenic | 35.0% |
| ! | GTTAACACTTCGGTTCTAAT+GGG | + | chr2.1:3339501-3339520 | None:intergenic | 35.0% |
| ! | GTTTTACAATGTCGAATTGC+AGG | - | chr2.1:3339601-3339620 | MS.gene47820:intron | 35.0% |
| ! | TCATACTTGTTAGGACGAAA+AGG | + | chr2.1:3338252-3338271 | None:intergenic | 35.0% |
| ! | TGTGACCAATTTGACGTTTT+AGG | - | chr2.1:3340705-3340724 | MS.gene47820:intron | 35.0% |
| !! | ATTGATATGTGAAGTTGGTG+TGG | - | chr2.1:3339794-3339813 | MS.gene47820:intron | 35.0% |
| !! | CTTATTGGGTATTGGATGTT+TGG | - | chr2.1:3341464-3341483 | MS.gene47820:intron | 35.0% |
| !! | GGTTGATGATTGATACTGAA+TGG | + | chr2.1:3340035-3340054 | None:intergenic | 35.0% |
| !!! | CATATTTTAGCTCAGTTGGT+AGG | - | chr2.1:3341044-3341063 | MS.gene47820:intron | 35.0% |
| AAGAAGACAACGATCTTCGT+TGG | - | chr2.1:3338541-3338560 | MS.gene47820:CDS | 40.0% | |
| AAGATCAGGGGTTCAAACAT+CGG | - | chr2.1:3341086-3341105 | MS.gene47820:intron | 40.0% | |
| AATCCGGAGTTTGGTCATAA+GGG | + | chr2.1:3339464-3339483 | None:intergenic | 40.0% | |
| ACATTGTTTACATGGTCACC+GGG | - | chr2.1:3339817-3339836 | MS.gene47820:intron | 40.0% | |
| ATAGCAAGCCACATAATGCA+AGG | + | chr2.1:3342230-3342249 | None:intergenic | 40.0% | |
| ATCCTCCAAAAAATCCAAGG+AGG | + | chr2.1:3342075-3342094 | None:intergenic | 40.0% | |
| CAAGACAAGCTAAACCTCTT+AGG | + | chr2.1:3342260-3342279 | None:intergenic | 40.0% | |
| CAATACCCAATAAGAGCAAC+AGG | + | chr2.1:3341458-3341477 | None:intergenic | 40.0% | |
| CATTTGCCATAGAGTGTAGA+GGG | + | chr2.1:3339667-3339686 | None:intergenic | 40.0% | |
| CCAATCCTCCAAAAAATCCA+AGG | + | chr2.1:3342078-3342097 | None:intergenic | 40.0% | |
| CCCCACTTATTCACCTTATA+AGG | - | chr2.1:3340823-3340842 | MS.gene47820:intron | 40.0% | |
| CTGTTGCTCTTATTGGGTAT+TGG | - | chr2.1:3341456-3341475 | MS.gene47820:intron | 40.0% | |
| CTTCAAGGAATGCAAAATGG+TGG | - | chr2.1:3338074-3338093 | MS.gene47820:intron | 40.0% | |
| GAAATTTAAATCACCCGGGA+AGG | + | chr2.1:3339301-3339320 | None:intergenic | 40.0% | |
| GACATTGTTTACATGGTCAC+CGG | - | chr2.1:3339816-3339835 | MS.gene47820:intron | 40.0% | |
| GCATTATTATATGCAGGGGT+TGG | - | chr2.1:3340783-3340802 | MS.gene47820:intron | 40.0% | |
| GCCAAAATCATGGATACCAA+TGG | - | chr2.1:3340298-3340317 | MS.gene47820:CDS | 40.0% | |
| GGAATAACCTTCCCATTCTT+TGG | - | chr2.1:3342046-3342065 | MS.gene47820:intron | 40.0% | |
| GTTTGACAGATACCATGAGT+TGG | - | chr2.1:3339719-3339738 | MS.gene47820:intron | 40.0% | |
| GTTTGGTCATAAGGGAAGTA+AGG | + | chr2.1:3339456-3339475 | None:intergenic | 40.0% | |
| TAATCACCCTCTACACTCTA+TGG | - | chr2.1:3339658-3339677 | MS.gene47820:intron | 40.0% | |
| TAATCCGGAGTTTGGTCATA+AGG | + | chr2.1:3339465-3339484 | None:intergenic | 40.0% | |
| TCCTCCAAAAAATCCAAGGA+GGG | + | chr2.1:3342074-3342093 | None:intergenic | 40.0% | |
| TGACATGATTGAGACCGTAA+TGG | - | chr2.1:3341706-3341725 | MS.gene47820:intron | 40.0% | |
| TGGTGTGGACATTGTTTACA+TGG | - | chr2.1:3339809-3339828 | MS.gene47820:intron | 40.0% | |
| TGTAGCTTCCTTGCATTATG+TGG | - | chr2.1:3342219-3342238 | MS.gene47820:CDS | 40.0% | |
| TTACTCAACAATTGCATGGG+TGG | - | chr2.1:3341196-3341215 | MS.gene47820:intron | 40.0% | |
| ! | CGTTAACACTTCGGTTCTAA+TGG | + | chr2.1:3339502-3339521 | None:intergenic | 40.0% |
| ! | GAAGCATTTGGAGAAAAGCT+TGG | - | chr2.1:3339747-3339766 | MS.gene47820:intron | 40.0% |
| ! | TATCTGTCAAACCGTTTTCC+TGG | + | chr2.1:3339711-3339730 | None:intergenic | 40.0% |
| ! | TTTTCACAACGTTACTGCCA+TGG | - | chr2.1:3338105-3338124 | MS.gene47820:intron | 40.0% |
| !! | CTAAGAGGTTTAGCTTGTCT+TGG | - | chr2.1:3342258-3342277 | MS.gene47820:CDS | 40.0% |
| !! | GGTGAGCACCTTTCTAAAAT+TGG | - | chr2.1:3341791-3341810 | MS.gene47820:intron | 40.0% |
| !! | TTTTTGGTCAGGTAGTCTAG+TGG | + | chr2.1:3340859-3340878 | None:intergenic | 40.0% |
| !!! | CCTTGGATTTTTTGGAGGAT+TGG | - | chr2.1:3342075-3342094 | MS.gene47820:intron | 40.0% |
| AAAGGGAGTTCAACCAGATG+TGG | - | chr2.1:3341229-3341248 | MS.gene47820:intron | 45.0% | |
| AACAGTTCCTGGTGTAGTTG+TGG | + | chr2.1:3341270-3341289 | None:intergenic | 45.0% | |
| ACAAATCTTAGGAGTCGGGT+TGG | + | chr2.1:3341752-3341771 | None:intergenic | 45.0% | |
| ACACGTTGCTCATCAGTAAG+AGG | + | chr2.1:3340437-3340456 | None:intergenic | 45.0% | |
| ACCAGCAATGGAGTTGAAGT+TGG | + | chr2.1:3339958-3339977 | None:intergenic | 45.0% | |
| ACCCACGAAATCTCCATCAT+CGG | + | chr2.1:3341926-3341945 | None:intergenic | 45.0% | |
| ACCTTACCTTGGATGATCGA+AGG | - | chr2.1:3340365-3340384 | MS.gene47820:CDS | 45.0% | |
| ATACCATCCAAGACTTGCCA+TGG | + | chr2.1:3338161-3338180 | None:intergenic | 45.0% | |
| ATGCTTCTTGTCCCAACTCA+TGG | + | chr2.1:3339734-3339753 | None:intergenic | 45.0% | |
| ATGGATCCTTCGATCATCCA+AGG | + | chr2.1:3340374-3340393 | None:intergenic | 45.0% | |
| ATTGTTTACATGGTCACCGG+GGG | - | chr2.1:3339819-3339838 | MS.gene47820:intron | 45.0% | |
| CATTGTTTACATGGTCACCG+GGG | - | chr2.1:3339818-3339837 | MS.gene47820:intron | 45.0% | |
| CCAGCAATGGAGTTGAAGTT+GGG | + | chr2.1:3339957-3339976 | None:intergenic | 45.0% | |
| CCATTTGCCATAGAGTGTAG+AGG | + | chr2.1:3339668-3339687 | None:intergenic | 45.0% | |
| CCTCTACACTCTATGGCAAA+TGG | - | chr2.1:3339665-3339684 | MS.gene47820:intron | 45.0% | |
| CTGCAGCAATCATGTCTTTG+AGG | - | chr2.1:3339988-3340007 | MS.gene47820:intron | 45.0% | |
| CTTCCCTTATGACCAAACTC+CGG | - | chr2.1:3339458-3339477 | MS.gene47820:intron | 45.0% | |
| GAGATGCATGAAATGGTTCC+AGG | - | chr2.1:3339690-3339709 | MS.gene47820:intron | 45.0% | |
| GATGTTGCATTTGCCTATGC+CGG | - | chr2.1:3341314-3341333 | MS.gene47820:intron | 45.0% | |
| GCTGCAACTATAAGCCAAGT+AGG | + | chr2.1:3341530-3341549 | None:intergenic | 45.0% | |
| GGAAAGAGGTCCTCATAATC+CGG | + | chr2.1:3339480-3339499 | None:intergenic | 45.0% | |
| GGAGTTGAAGTTGGGAAGAT+GGG | + | chr2.1:3339949-3339968 | None:intergenic | 45.0% | |
| GGCTTCCCATAACTTCTTCA+AGG | - | chr2.1:3338059-3338078 | MS.gene47820:intron | 45.0% | |
| TACAAAGCCACAACTACACC+AGG | - | chr2.1:3341260-3341279 | MS.gene47820:intron | 45.0% | |
| TCCTTCGATCATCCAAGGTA+AGG | + | chr2.1:3340369-3340388 | None:intergenic | 45.0% | |
| TGACCAAACTCCGGATTATG+AGG | - | chr2.1:3339467-3339486 | MS.gene47820:intron | 45.0% | |
| TGCTTCTTCAGAGGCTGAAA+AGG | - | chr2.1:3337820-3337839 | MS.gene47820:CDS | 45.0% | |
| TGGAGTTGAAGTTGGGAAGA+TGG | + | chr2.1:3339950-3339969 | None:intergenic | 45.0% | |
| TTATTGAGAACGGGTCGTGA+TGG | + | chr2.1:3340540-3340559 | None:intergenic | 45.0% | |
| TTGGAGAAAAGCTTGGACTC+TGG | - | chr2.1:3339754-3339773 | MS.gene47820:intron | 45.0% | |
| TTTCTCAGCACAAGAACCAG+AGG | - | chr2.1:3337847-3337866 | MS.gene47820:intron | 45.0% | |
| ! | CTTCGGTTCTAATGGGAAAG+AGG | + | chr2.1:3339494-3339513 | None:intergenic | 45.0% |
| ! | TCAGCCTCTGAAGAAGCAAT+TGG | + | chr2.1:3337818-3337837 | None:intergenic | 45.0% |
| !! | AGTTGTGGCTTTGTAGCCAT+AGG | + | chr2.1:3341255-3341274 | None:intergenic | 45.0% |
| !! | ATCCGATGATGGAGATTTCG+TGG | - | chr2.1:3341921-3341940 | MS.gene47820:CDS | 45.0% |
| !! | GAGTTGGGACAAGAAGCATT+TGG | - | chr2.1:3339735-3339754 | MS.gene47820:intron | 45.0% |
| !! | TCCGATGATGGAGATTTCGT+GGG | - | chr2.1:3341922-3341941 | MS.gene47820:CDS | 45.0% |
| !! | TTTTTGCAGTGATTTGCCCC+CGG | + | chr2.1:3339838-3339857 | None:intergenic | 45.0% |
| !! | AAAAATATAAATAAAAAAAG+TGG | - | chr2.1:3338664-3338683 | MS.gene47820:CDS | 5.0% |
| !! | TTATATTATATATTAATTTC+TGG | + | chr2.1:3340982-3341001 | None:intergenic | 5.0% |
| !!! | TATTTTTCTTTAAATATATT+TGG | - | chr2.1:3342137-3342156 | MS.gene47820:intron | 5.0% |
| !!! | TTAAAGAAAAATAAATTTTA+TGG | + | chr2.1:3342130-3342149 | None:intergenic | 5.0% |
| AACCATCCAAGGGTCCAATG+TGG | - | chr2.1:3341387-3341406 | MS.gene47820:intron | 50.0% | |
| ACACCGGAGAAACCATCCAA+GGG | - | chr2.1:3341377-3341396 | MS.gene47820:intron | 50.0% | |
| AGACATGATTGCTGCAGCCA+AGG | + | chr2.1:3339985-3340004 | None:intergenic | 50.0% | |
| AGCCAAGGAGATACCAGCAA+TGG | + | chr2.1:3339970-3339989 | None:intergenic | 50.0% | |
| CACAACGTTACTGCCATGGT+TGG | - | chr2.1:3338109-3338128 | MS.gene47820:intron | 50.0% | |
| CCCAACTTCAACTCCATTGC+TGG | - | chr2.1:3339954-3339973 | MS.gene47820:intron | 50.0% | |
| CTCCAACACCACATTGTGTC+CGG | + | chr2.1:3341336-3341355 | None:intergenic | 50.0% | |
| CTCCATTGCTGGTATCTCCT+TGG | - | chr2.1:3339965-3339984 | MS.gene47820:intron | 50.0% | |
| CTCTCGAACAAATTGGGCTC+AGG | - | chr2.1:3339352-3339371 | MS.gene47820:intron | 50.0% | |
| CTTGAGTCTTCCATCTGCCA+TGG | - | chr2.1:3338141-3338160 | MS.gene47820:intron | 50.0% | |
| GGTCCTCATAATCCGGAGTT+TGG | + | chr2.1:3339473-3339492 | None:intergenic | 50.0% | |
| GTGAGCATAGCTCAGTTGGT+AGG | - | chr2.1:3340755-3340774 | MS.gene47820:intron | 50.0% | |
| GTTCAACCAGATGTGGCCTA+TGG | - | chr2.1:3341236-3341255 | MS.gene47820:intron | 50.0% | |
| TCGAACAAATTGGGCTCAGG+TGG | - | chr2.1:3339355-3339374 | MS.gene47820:intron | 50.0% | |
| TCTCGTGAGCATAGCTCAGT+TGG | - | chr2.1:3340751-3340770 | MS.gene47820:intron | 50.0% | |
| TTGTAGCCATAGGCCACATC+TGG | + | chr2.1:3341245-3341264 | None:intergenic | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | + | chr2.1:3340819-3340838 | None:intergenic | 50.0% |
| ! | CTGAGCCCAATTTGTTCGAG+AGG | + | chr2.1:3339354-3339373 | None:intergenic | 50.0% |
| ! | GCTTGTCTTGGTTCGCAAAC+TGG | - | chr2.1:3342270-3342289 | MS.gene47820:CDS | 50.0% |
| !! | CAAGGAGGGCACCAAAGAAT+GGG | + | chr2.1:3342060-3342079 | None:intergenic | 50.0% |
| !!! | GCCCTCCTTGGATTTTTTGG+AGG | - | chr2.1:3342070-3342089 | MS.gene47820:intron | 50.0% |
| !!! | GGTGCCCTCCTTGGATTTTT+TGG | - | chr2.1:3342067-3342086 | MS.gene47820:intron | 50.0% |
| AGCAACAATCCCGTCCACAC+CGG | - | chr2.1:3341361-3341380 | MS.gene47820:intron | 55.0% | |
| ATGGTTTCTCCGGTGTGGAC+GGG | + | chr2.1:3341373-3341392 | None:intergenic | 55.0% | |
| ATGTCGAATTGCAGGGGTCC+TGG | - | chr2.1:3339609-3339628 | MS.gene47820:intron | 55.0% | |
| CAAGACACCAGCTCCAACCA+TGG | + | chr2.1:3338125-3338144 | None:intergenic | 55.0% | |
| CACACCGGAGAAACCATCCA+AGG | - | chr2.1:3341376-3341395 | MS.gene47820:intron | 55.0% | |
| CACCACATTGTGTCCGGCAT+AGG | + | chr2.1:3341330-3341349 | None:intergenic | 55.0% | |
| CCAAGACTTGCCATGGCAGA+TGG | + | chr2.1:3338154-3338173 | None:intergenic | 55.0% | |
| CCATCTGCCATGGCAAGTCT+TGG | - | chr2.1:3338151-3338170 | MS.gene47820:intron | 55.0% | |
| CTCCACATTGGACCCTTGGA+TGG | + | chr2.1:3341392-3341411 | None:intergenic | 55.0% | |
| CTGCCATGGCAAGTCTTGGA+TGG | - | chr2.1:3338155-3338174 | MS.gene47820:intron | 55.0% | |
| CTTGGATGGTTTCTCCGGTG+TGG | + | chr2.1:3341378-3341397 | None:intergenic | 55.0% | |
| GATGGTTTCTCCGGTGTGGA+CGG | + | chr2.1:3341374-3341393 | None:intergenic | 55.0% | |
| GGACCCTTGGATGGTTTCTC+CGG | + | chr2.1:3341383-3341402 | None:intergenic | 55.0% | |
| GTTACTGCCATGGTTGGAGC+TGG | - | chr2.1:3338115-3338134 | MS.gene47820:intron | 55.0% | |
| TCCAAGGGTCCAATGTGGAG+AGG | - | chr2.1:3341392-3341411 | MS.gene47820:intron | 55.0% | |
| TCCTCTCCACATTGGACCCT+TGG | + | chr2.1:3341396-3341415 | None:intergenic | 55.0% | |
| TGCCGGACACAATGTGGTGT+TGG | - | chr2.1:3341331-3341350 | MS.gene47820:intron | 55.0% | |
| TGCCTATGCCGGACACAATG+TGG | - | chr2.1:3341325-3341344 | MS.gene47820:intron | 55.0% | |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | + | chr2.1:3340818-3340837 | None:intergenic | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | + | chr2.1:3340817-3340836 | None:intergenic | 55.0% |
| !! | CCAAGGAGGGCACCAAAGAA+TGG | + | chr2.1:3342061-3342080 | None:intergenic | 55.0% |
| !! | CCATTCTTTGGTGCCCTCCT+TGG | - | chr2.1:3342058-3342077 | MS.gene47820:intron | 55.0% |
| !! | GAGAACGGGTCGTGATGGAT+TGG | + | chr2.1:3340535-3340554 | None:intergenic | 55.0% |
| !! | GAGGGCACCAAAGAATGGGA+AGG | + | chr2.1:3342056-3342075 | None:intergenic | 55.0% |
| GAATTGCAGGGGTCCTGGTG+TGG | - | chr2.1:3339614-3339633 | MS.gene47820:intron | 60.0% | |
| AGGGGTTGGGGTTCGAACCC+CGG | - | chr2.1:3340797-3340816 | MS.gene47820:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 3337785 | 3342292 | 3337785 | ID=MS.gene47820 |
| chr2.1 | mRNA | 3337785 | 3342292 | 3337785 | ID=MS.gene47820.t1;Parent=MS.gene47820 |
| chr2.1 | exon | 3342209 | 3342292 | 3342209 | ID=MS.gene47820.t1.exon1;Parent=MS.gene47820.t1 |
| chr2.1 | CDS | 3342209 | 3342292 | 3342209 | ID=cds.MS.gene47820.t1;Parent=MS.gene47820.t1 |
| chr2.1 | exon | 3341901 | 3342058 | 3341901 | ID=MS.gene47820.t1.exon2;Parent=MS.gene47820.t1 |
| chr2.1 | CDS | 3341901 | 3342058 | 3341901 | ID=cds.MS.gene47820.t1;Parent=MS.gene47820.t1 |
| chr2.1 | exon | 3340068 | 3340454 | 3340068 | ID=MS.gene47820.t1.exon3;Parent=MS.gene47820.t1 |
| chr2.1 | CDS | 3340068 | 3340454 | 3340068 | ID=cds.MS.gene47820.t1;Parent=MS.gene47820.t1 |
| chr2.1 | exon | 3338488 | 3338881 | 3338488 | ID=MS.gene47820.t1.exon4;Parent=MS.gene47820.t1 |
| chr2.1 | CDS | 3338488 | 3338881 | 3338488 | ID=cds.MS.gene47820.t1;Parent=MS.gene47820.t1 |
| chr2.1 | exon | 3338286 | 3338391 | 3338286 | ID=MS.gene47820.t1.exon5;Parent=MS.gene47820.t1 |
| chr2.1 | CDS | 3338286 | 3338391 | 3338286 | ID=cds.MS.gene47820.t1;Parent=MS.gene47820.t1 |
| chr2.1 | exon | 3337957 | 3338048 | 3337957 | ID=MS.gene47820.t1.exon6;Parent=MS.gene47820.t1 |
| chr2.1 | CDS | 3337957 | 3338048 | 3337957 | ID=cds.MS.gene47820.t1;Parent=MS.gene47820.t1 |
| chr2.1 | exon | 3337785 | 3337853 | 3337785 | ID=MS.gene47820.t1.exon7;Parent=MS.gene47820.t1 |
| chr2.1 | CDS | 3337785 | 3337853 | 3337785 | ID=cds.MS.gene47820.t1;Parent=MS.gene47820.t1 |
| Gene Sequence |
| Protein sequence |
