Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071623.t1 | 6NIB_A | 97.4 | 344 | 6 | 1 | 1 | 341 | 24 | 367 | 5.60E-201 | 709.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071623.t1 | Q8GWW7 | 73.5 | 343 | 88 | 1 | 1 | 340 | 31 | 373 | 2.2e-153 | 543.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071623.t1 | G7JT50 | 97.4 | 344 | 6 | 1 | 1 | 341 | 31 | 374 | 4.1e-201 | 709.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051525 | MS.gene071623 | 0.810854 | 9.37E-51 | -1.69E-46 |
| MS.gene051568 | MS.gene071623 | 0.826448 | 2.70E-54 | -1.69E-46 |
| MS.gene051588 | MS.gene071623 | 0.839776 | 1.29E-57 | -1.69E-46 |
| MS.gene053169 | MS.gene071623 | 0.821384 | 4.16E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene071623 | 0.814105 | 1.82E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene071623 | 0.810869 | 9.30E-51 | -1.69E-46 |
| MS.gene054920 | MS.gene071623 | 0.846154 | 2.60E-59 | -1.69E-46 |
| MS.gene055369 | MS.gene071623 | 0.800746 | 1.25E-48 | -1.69E-46 |
| MS.gene055911 | MS.gene071623 | 0.803475 | 3.43E-49 | -1.69E-46 |
| MS.gene056514 | MS.gene071623 | 0.816783 | 4.63E-52 | -1.69E-46 |
| MS.gene057476 | MS.gene071623 | 0.818776 | 1.64E-52 | -1.69E-46 |
| MS.gene057888 | MS.gene071623 | 0.800273 | 1.56E-48 | -1.69E-46 |
| MS.gene058529 | MS.gene071623 | 0.822716 | 2.04E-53 | -1.69E-46 |
| MS.gene058700 | MS.gene071623 | 0.817437 | 3.30E-52 | -1.69E-46 |
| MS.gene058738 | MS.gene071623 | 0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene059082 | MS.gene071623 | 0.806636 | 7.47E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene071623 | 0.821394 | 4.13E-53 | -1.69E-46 |
| MS.gene059462 | MS.gene071623 | 0.808461 | 3.06E-50 | -1.69E-46 |
| MS.gene059540 | MS.gene071623 | -0.812206 | 4.76E-51 | -1.69E-46 |
| MS.gene059868 | MS.gene071623 | 0.805612 | 1.23E-49 | -1.69E-46 |
| MS.gene059933 | MS.gene071623 | 0.80492 | 1.71E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071623.t1 | MTR_4g112810 | 97.384 | 344 | 6 | 1 | 1 | 341 | 31 | 374 | 0.0 | 691 |
| MS.gene071623.t1 | MTR_4g110140 | 61.798 | 356 | 86 | 6 | 1 | 319 | 31 | 373 | 2.87e-142 | 409 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071623.t1 | AT5G08170 | 73.469 | 343 | 88 | 1 | 1 | 340 | 25 | 367 | 0.0 | 533 |
| MS.gene071623.t1 | AT5G08170 | 73.469 | 343 | 88 | 1 | 1 | 340 | 31 | 373 | 0.0 | 530 |
| MS.gene071623.t1 | AT5G08170 | 73.702 | 289 | 73 | 1 | 55 | 340 | 1 | 289 | 1.03e-161 | 454 |
| MS.gene071623.t1 | AT5G08170 | 73.702 | 289 | 73 | 1 | 55 | 340 | 1 | 289 | 1.03e-161 | 454 |
| MS.gene071623.t1 | AT5G08170 | 73.702 | 289 | 73 | 1 | 55 | 340 | 1 | 289 | 1.03e-161 | 454 |
Find 84 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATCATTGCTCCACAATT+TGG | 0.199735 | 8.4:+17533241 | MS.gene071623:CDS |
| CCTTAAGTTCATCCTCTATT+TGG | 0.200717 | 8.4:-17531009 | None:intergenic |
| AGATTAGCTCCAACGATTCT+TGG | 0.296878 | 8.4:+17530081 | MS.gene071623:CDS |
| CATGATCCGGTAGCTGATTC+CGG | 0.299009 | 8.4:-17530046 | None:intergenic |
| GTTGAGAGAATATTTCTAAA+TGG | 0.323501 | 8.4:-17533918 | None:intergenic |
| TGGTTGCCTCATGGATTATA+TGG | 0.334289 | 8.4:+17531058 | MS.gene071623:CDS |
| TTGGAGTTAGGAAGGTTATA+TGG | 0.342843 | 8.4:+17531038 | MS.gene071623:CDS |
| TTGTGGGAATTGAAGGTTCC+AGG | 0.350594 | 8.4:+17533843 | MS.gene071623:CDS |
| TTAAGGCATATCTTGGAGTT+AGG | 0.360625 | 8.4:+17531026 | MS.gene071623:CDS |
| GACAGGAACGCGCCGATAAT+TGG | 0.368550 | 8.4:+17529603 | None:intergenic |
| TGACTGGACTTTCAATAGTT+GGG | 0.371650 | 8.4:+17530279 | MS.gene071623:CDS |
| GGAGCCAAGCCAAGGCTTCC+TGG | 0.371687 | 8.4:+17533172 | MS.gene071623:CDS |
| TCTTTCTCAGTCATGTATAA+TGG | 0.381846 | 8.4:-17532157 | None:intergenic |
| TCCTAGGTTGTGGGAATTGA+AGG | 0.384816 | 8.4:+17533836 | MS.gene071623:intron |
| TTGACTGGACTTTCAATAGT+TGG | 0.389120 | 8.4:+17530278 | MS.gene071623:CDS |
| TCCCATTCTATGGTGCTTGA+AGG | 0.402654 | 8.4:+17530629 | MS.gene071623:CDS |
| GGAAGGTCTTAGACAGAATT+CGG | 0.404780 | 8.4:-17533291 | None:intergenic |
| AAGATGGATGTTACTGTGAT+TGG | 0.407228 | 8.4:+17530458 | MS.gene071623:CDS |
| CTTGTTCAATAGACACTCTT+CGG | 0.412003 | 8.4:-17530960 | None:intergenic |
| CTGGTGTGGTTCTTCTGTCT+TGG | 0.415700 | 8.4:+17532017 | MS.gene071623:CDS |
| ACCATAGAATGGGAAAATCT+AGG | 0.420979 | 8.4:-17530620 | None:intergenic |
| GGCACCGTCACGCCAATTAT+CGG | 0.422589 | 8.4:-17529615 | None:intergenic |
| GATGAACTTAAGGCATATCT+TGG | 0.425040 | 8.4:+17531019 | MS.gene071623:CDS |
| CGCCTTCAAGCACCATAGAA+TGG | 0.425702 | 8.4:-17530631 | None:intergenic |
| CCAAATAGAGGATGAACTTA+AGG | 0.428188 | 8.4:+17531009 | MS.gene071623:CDS |
| GATGCGGAGCATAGGATTGC+GGG | 0.431755 | 8.4:+17530253 | MS.gene071623:CDS |
| ATGATCCGGTAGCTGATTCC+GGG | 0.431760 | 8.4:-17530045 | None:intergenic |
| ATTTGGCTCTTACTCAAATG+TGG | 0.433728 | 8.4:-17530992 | None:intergenic |
| CTCAGTCATGTATAATGGAC+CGG | 0.444715 | 8.4:-17532152 | None:intergenic |
| GGCGGAAGCATCCATGTAGA+TGG | 0.446962 | 8.4:+17530650 | MS.gene071623:CDS |
| GTGATCAAACTCCATGTTCC+CGG | 0.448519 | 8.4:+17532133 | MS.gene071623:CDS |
| TCAAGTATAACTGATGCTAA+TGG | 0.454381 | 8.4:+17532097 | MS.gene071623:CDS |
| AGAGAATATTTCTAAATGGC+TGG | 0.455579 | 8.4:-17533914 | None:intergenic |
| AAATGTTTAGGTTTAGAAGA+TGG | 0.456598 | 8.4:+17530442 | MS.gene071623:intron |
| GCCTTCAAGCACCATAGAAT+GGG | 0.457536 | 8.4:-17530630 | None:intergenic |
| AGTGTCTATTGAACAAGAAC+AGG | 0.457681 | 8.4:+17530966 | MS.gene071623:CDS |
| CGTTTGTGCTAGTTCAGCTC+AGG | 0.468384 | 8.4:+17529700 | MS.gene071623:CDS |
| TTTGGCTCTTACTCAAATGT+GGG | 0.487275 | 8.4:-17530991 | None:intergenic |
| ATTATACATGACTGAGAAAG+AGG | 0.489453 | 8.4:+17532159 | MS.gene071623:CDS |
| AATCCTATGCTCCGCATCAT+CGG | 0.491261 | 8.4:-17530248 | None:intergenic |
| ATAGGATTGCGGGAATTGAC+TGG | 0.492124 | 8.4:+17530263 | MS.gene071623:CDS |
| TGTATAATGGACCGGGAACA+TGG | 0.510017 | 8.4:-17532144 | None:intergenic |
| AGAGATTGCAGCCGCCACTC+TGG | 0.511265 | 8.4:-17529660 | None:intergenic |
| CTGAGCTGAACTAGCACAAA+CGG | 0.515091 | 8.4:-17529699 | None:intergenic |
| AGTACCAGGAAGCCTTGGCT+TGG | 0.515607 | 8.4:-17533176 | None:intergenic |
| GGCATATCTTGGAGTTAGGA+AGG | 0.517285 | 8.4:+17531030 | MS.gene071623:CDS |
| TCAACGACTCTAACATGATC+CGG | 0.518148 | 8.4:-17530059 | None:intergenic |
| ATGACTGAGAAAGAGGCTGC+TGG | 0.520293 | 8.4:+17532166 | MS.gene071623:CDS |
| ACCTGACAAAACAATCTCCC+TGG | 0.521534 | 8.4:-17533861 | None:intergenic |
| TGACTGAGAAAGAGGCTGCT+GGG | 0.523464 | 8.4:+17532167 | MS.gene071623:CDS |
| AGTCTAGTACCAGGAAGCCT+TGG | 0.524063 | 8.4:-17533181 | None:intergenic |
| GACTGGACTTTCAATAGTTG+GGG | 0.526517 | 8.4:+17530280 | MS.gene071623:CDS |
| GTCACGAAACCAAGAATCGT+TGG | 0.536081 | 8.4:-17530090 | None:intergenic |
| GACTGAGAAAGAGGCTGCTG+GGG | 0.537133 | 8.4:+17532168 | MS.gene071623:CDS |
| AAACACAAGTTGAGCATGAA+CGG | 0.539621 | 8.4:-17529636 | None:intergenic |
| AAGGTTATATGGTTGCCTCA+TGG | 0.541390 | 8.4:+17531049 | MS.gene071623:CDS |
| TTTGAGTAAGAGCCAAATAG+AGG | 0.541729 | 8.4:+17530997 | MS.gene071623:CDS |
| ACAGGAGATGATGATACAAA+TGG | 0.542165 | 8.4:+17531962 | MS.gene071623:intron |
| GATTCTTGGTTTCGTGACAT+TGG | 0.542389 | 8.4:+17530095 | MS.gene071623:CDS |
| TGCAATGTAAAAGTTTACAT+AGG | 0.549734 | 8.4:-17533212 | None:intergenic |
| CGCGCCGATAATTGGCGTGA+CGG | 0.553368 | 8.4:+17529611 | MS.gene071623:CDS |
| TTTGTTGATTCCTAGGTTGT+GGG | 0.556323 | 8.4:+17533827 | MS.gene071623:intron |
| AAAATACTCACTTCATGATG+AGG | 0.559236 | 8.4:-17533313 | None:intergenic |
| TTGTTTAACAGTTTGTAGTG+AGG | 0.572818 | 8.4:+17530209 | MS.gene071623:intron |
| AATCCGATGATGCGGAGCAT+AGG | 0.574874 | 8.4:+17530245 | MS.gene071623:CDS |
| TCTCACCTTCTCCATCTACA+TGG | 0.576000 | 8.4:-17530661 | None:intergenic |
| TCTTCAGATCTTTCATACTG+AGG | 0.576852 | 8.4:-17532058 | None:intergenic |
| TGTGGGAATTGAAGGTTCCA+GGG | 0.582236 | 8.4:+17533844 | MS.gene071623:CDS |
| CATTCTATGGTGCTTGAAGG+CGG | 0.592030 | 8.4:+17530632 | MS.gene071623:CDS |
| AACATTGAAATCCGATGATG+CGG | 0.592828 | 8.4:+17530237 | MS.gene071623:CDS |
| GAATGCCCGGAATCAGCTAC+CGG | 0.593981 | 8.4:+17530040 | MS.gene071623:CDS |
| AAATACTCACTTCATGATGA+GGG | 0.594366 | 8.4:-17533312 | None:intergenic |
| TCAACTTGTGTTTGCCAGAG+TGG | 0.603974 | 8.4:+17529646 | MS.gene071623:CDS |
| GAAGCAGCAAGTCTAGTACC+AGG | 0.605026 | 8.4:-17533190 | None:intergenic |
| CAAGACAGAAGAACCACACC+AGG | 0.606639 | 8.4:-17532016 | None:intergenic |
| AGGATGATGGAGCCAAGCCA+AGG | 0.607977 | 8.4:+17533164 | MS.gene071623:intron |
| TGGACTTTCAATAGTTGGGG+AGG | 0.614804 | 8.4:+17530283 | MS.gene071623:CDS |
| AGCATCCATGTAGATGGAGA+AGG | 0.617041 | 8.4:+17530656 | MS.gene071623:CDS |
| TCAGTCATGTATAATGGACC+GGG | 0.622248 | 8.4:-17532151 | None:intergenic |
| ACTCACTTCATGATGAGGGA+AGG | 0.632244 | 8.4:-17533308 | None:intergenic |
| TGATGCGGAGCATAGGATTG+CGG | 0.633163 | 8.4:+17530252 | MS.gene071623:CDS |
| ACTTGTGTTTGCCAGAGTGG+CGG | 0.660221 | 8.4:+17529649 | MS.gene071623:CDS |
| GTTCAATAGACACTCTTCGG+TGG | 0.670209 | 8.4:-17530957 | None:intergenic |
| TACATACCATATAATCCATG+AGG | 0.692612 | 8.4:-17531064 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAATTTATTTTTTT+TGG | + | chr8.4:17533330-17533349 | MS.gene071623:intron | 0.0% |
| !! | ATAAATTAGATTTAGATATT+GGG | + | chr8.4:17532875-17532894 | MS.gene071623:intron | 10.0% |
| !! | AATTTCTGATTTATAAGTAT+TGG | - | chr8.4:17529774-17529793 | None:intergenic | 15.0% |
| !! | ACGATTTATAACAATTAAAA+TGG | - | chr8.4:17529742-17529761 | None:intergenic | 15.0% |
| !! | ATTTCTGATTTATAAGTATT+GGG | - | chr8.4:17529773-17529792 | None:intergenic | 15.0% |
| !! | CATAAATTAGATTTAGATAT+TGG | + | chr8.4:17532874-17532893 | MS.gene071623:intron | 15.0% |
| !! | TCTATAAAATCATGATAAAA+TGG | - | chr8.4:17531179-17531198 | None:intergenic | 15.0% |
| !! | TTCATGAAAAAATTACATTT+AGG | - | chr8.4:17530750-17530769 | None:intergenic | 15.0% |
| !!! | ATTTTAATTGTTATAAATCG+TGG | + | chr8.4:17529741-17529760 | MS.gene071623:intron | 15.0% |
| !!! | TCTACAATAATTTGATAATT+AGG | + | chr8.4:17532682-17532701 | MS.gene071623:intron | 15.0% |
| !!! | TTGAGTTTTATAAAATGTTT+AGG | + | chr8.4:17530430-17530449 | MS.gene071623:intron | 15.0% |
| !! | AAAAAGAAAGAAACACAATT+TGG | - | chr8.4:17532209-17532228 | None:intergenic | 20.0% |
| !! | AGCAATAATATCAATTCATA+GGG | - | chr8.4:17531122-17531141 | None:intergenic | 20.0% |
| !! | ATACTTCTTAATAACAACAT+AGG | - | chr8.4:17531932-17531951 | None:intergenic | 20.0% |
| !! | ATGAAAAAATTACATTTAGG+TGG | - | chr8.4:17530747-17530766 | None:intergenic | 20.0% |
| !! | CATTAAGAGTTAAATATAAC+TGG | - | chr8.4:17532233-17532252 | None:intergenic | 20.0% |
| !! | GTAGAATAAAAATACAATTG+AGG | - | chr8.4:17531596-17531615 | None:intergenic | 20.0% |
| !! | TAAATCAGAAATTATAACGA+TGG | + | chr8.4:17529781-17529800 | MS.gene071623:intron | 20.0% |
| !! | TAATAGGCAAATTCTAATAT+GGG | - | chr8.4:17529957-17529976 | None:intergenic | 20.0% |
| !! | TCAATTTGAAGACTAATTAA+TGG | + | chr8.4:17530346-17530365 | MS.gene071623:intron | 20.0% |
| !! | TTGAATTGATTATTATGTCT+TGG | + | chr8.4:17530388-17530407 | MS.gene071623:intron | 20.0% |
| !! | TTTAAATTGAACACTGTAAA+AGG | + | chr8.4:17532848-17532867 | MS.gene071623:intron | 20.0% |
| !! | TTTATTCTACAAATTGAATC+AGG | + | chr8.4:17531606-17531625 | MS.gene071623:intron | 20.0% |
| !!! | ATGTAATTTTTTCATGAATG+AGG | + | chr8.4:17530752-17530771 | MS.gene071623:intron | 20.0% |
| ! | AAAATCTACCAAACATGTAT+TGG | - | chr8.4:17530584-17530603 | None:intergenic | 25.0% |
| ! | AATAAGTATTTACCATGAAC+TGG | - | chr8.4:17531312-17531331 | None:intergenic | 25.0% |
| ! | AATAGGCAAATTCTAATATG+GGG | - | chr8.4:17529956-17529975 | None:intergenic | 25.0% |
| ! | ACAAATTATCAGAACGTAAT+AGG | - | chr8.4:17529973-17529992 | None:intergenic | 25.0% |
| ! | ACAATTTGGAGATAAAAAGT+GGG | + | chr8.4:17533255-17533274 | MS.gene071623:CDS | 25.0% |
| ! | ATCAATTCAATGAATCACAT+TGG | - | chr8.4:17530378-17530397 | None:intergenic | 25.0% |
| ! | ATGAATTGATATTATTGCTC+AGG | + | chr8.4:17531123-17531142 | MS.gene071623:intron | 25.0% |
| ! | ATTTCAAAAGCAATTCAGTA+AGG | - | chr8.4:17530883-17530902 | None:intergenic | 25.0% |
| ! | ATTTGATGCTTTCAAATGAT+AGG | + | chr8.4:17532387-17532406 | MS.gene071623:intron | 25.0% |
| ! | GAGCAATAATATCAATTCAT+AGG | - | chr8.4:17531123-17531142 | None:intergenic | 25.0% |
| ! | GTAATAGGCAAATTCTAATA+TGG | - | chr8.4:17529958-17529977 | None:intergenic | 25.0% |
| ! | GTTTATGAACTGTAACATTT+AGG | + | chr8.4:17533759-17533778 | MS.gene071623:intron | 25.0% |
| ! | TAGTACTATAATGAAACTAC+TGG | - | chr8.4:17533704-17533723 | None:intergenic | 25.0% |
| ! | TATAATGAAACTACTGGATT+GGG | - | chr8.4:17533698-17533717 | None:intergenic | 25.0% |
| ! | TGCAATGTAAAAGTTTACAT+AGG | - | chr8.4:17533215-17533234 | None:intergenic | 25.0% |
| ! | TTAAAACGAAGTTTAAGCAT+TGG | + | chr8.4:17532421-17532440 | MS.gene071623:intron | 25.0% |
| !! | AAATGTTTAGGTTTAGAAGA+TGG | + | chr8.4:17530442-17530461 | MS.gene071623:intron | 25.0% |
| !! | AATACATGTTTGGTAGATTT+TGG | + | chr8.4:17530583-17530602 | MS.gene071623:intron | 25.0% |
| !! | GGTGTAATTCTATATTTTTC+AGG | + | chr8.4:17533144-17533163 | MS.gene071623:intron | 25.0% |
| !! | GTAAACTTTTACATTGCAAA+TGG | + | chr8.4:17533217-17533236 | MS.gene071623:CDS | 25.0% |
| !! | TAAAGGTCTAATCATTTTCA+CGG | - | chr8.4:17529873-17529892 | None:intergenic | 25.0% |
| !! | TCATATTGATTATCACAGAA+TGG | + | chr8.4:17531460-17531479 | MS.gene071623:intron | 25.0% |
| !! | TTTTTCATATAATGAGTTGC+AGG | - | chr8.4:17532994-17533013 | None:intergenic | 25.0% |
| !!! | ACTGAATATTTGTTTTTGGT+TGG | + | chr8.4:17532548-17532567 | MS.gene071623:intron | 25.0% |
| !!! | ACTTCGTTTTAACCAATATA+AGG | - | chr8.4:17532413-17532432 | None:intergenic | 25.0% |
| !!! | AGAAGTATGTTGTTTTATAC+AGG | + | chr8.4:17531944-17531963 | MS.gene071623:intron | 25.0% |
| !!! | AGAGACTGAATATTTGTTTT+TGG | + | chr8.4:17532544-17532563 | MS.gene071623:intron | 25.0% |
| !!! | TAGTTGCATTTTTCAAGTAT+TGG | + | chr8.4:17532577-17532596 | MS.gene071623:intron | 25.0% |
| !!! | TATAATGTTTGTTGATTCCT+AGG | + | chr8.4:17533820-17533839 | MS.gene071623:intron | 25.0% |
| !!! | TTCTATATTTTTCAGGATGA+TGG | + | chr8.4:17533151-17533170 | MS.gene071623:intron | 25.0% |
| !!! | TTCTTACAACTTTTTCTTTG+AGG | + | chr8.4:17531667-17531686 | MS.gene071623:intron | 25.0% |
| !!! | TTGTTTCTAATTATGTGCTT+TGG | + | chr8.4:17529989-17530008 | MS.gene071623:intron | 25.0% |
| !!! | TTTTAGAGTGAAACAAAGTA+TGG | + | chr8.4:17531498-17531517 | MS.gene071623:intron | 25.0% |
| AAAATACTCACTTCATGATG+AGG | - | chr8.4:17533316-17533335 | None:intergenic | 30.0% | |
| AAATACTCACTTCATGATGA+GGG | - | chr8.4:17533315-17533334 | None:intergenic | 30.0% | |
| AAGGATATCTAAGTTTCAAG+CGG | - | chr8.4:17530864-17530883 | None:intergenic | 30.0% | |
| ACAGAGACACTCTAATAAAT+GGG | + | chr8.4:17531863-17531882 | MS.gene071623:intron | 30.0% | |
| ATAAATGGGATACACGATTT+AGG | + | chr8.4:17531877-17531896 | MS.gene071623:intron | 30.0% | |
| ATCGCTTATTCATGATGATT+TGG | - | chr8.4:17533634-17533653 | None:intergenic | 30.0% | |
| ATCTGAGTAGTAAATGCAAT+AGG | - | chr8.4:17532793-17532812 | None:intergenic | 30.0% | |
| ATGTTATTAATACCCAGACT+TGG | - | chr8.4:17531564-17531583 | None:intergenic | 30.0% | |
| ATTATACATGACTGAGAAAG+AGG | + | chr8.4:17532159-17532178 | MS.gene071623:CDS | 30.0% | |
| ATTGTAGAGATGCAATCATA+GGG | - | chr8.4:17532670-17532689 | None:intergenic | 30.0% | |
| CACAATTTGGAGATAAAAAG+TGG | + | chr8.4:17533254-17533273 | MS.gene071623:CDS | 30.0% | |
| CTATAATGAAACTACTGGAT+TGG | - | chr8.4:17533699-17533718 | None:intergenic | 30.0% | |
| GAGTTAATGCAGTGATTTAT+TGG | + | chr8.4:17530682-17530701 | MS.gene071623:intron | 30.0% | |
| GATATTACATCCTATCCTAT+TGG | - | chr8.4:17532744-17532763 | None:intergenic | 30.0% | |
| GATTATTATGTCTTGGTTGT+TGG | + | chr8.4:17530395-17530414 | MS.gene071623:intron | 30.0% | |
| TACAAATTGAATCAGGAAGT+TGG | + | chr8.4:17531613-17531632 | MS.gene071623:intron | 30.0% | |
| TACACAATATAAACCTCTAC+TGG | + | chr8.4:17533114-17533133 | MS.gene071623:intron | 30.0% | |
| TACATACCATATAATCCATG+AGG | - | chr8.4:17531067-17531086 | None:intergenic | 30.0% | |
| TATCCTATTGGAAACAAAAC+TGG | - | chr8.4:17532732-17532751 | None:intergenic | 30.0% | |
| TATTCATTCTTAACCATACC+AGG | - | chr8.4:17533051-17533070 | None:intergenic | 30.0% | |
| TATTGTAGAGATGCAATCAT+AGG | - | chr8.4:17532671-17532690 | None:intergenic | 30.0% | |
| TCAAGTATAACTGATGCTAA+TGG | + | chr8.4:17532097-17532116 | MS.gene071623:CDS | 30.0% | |
| TCTAATAAATATCCCAGCTT+GGG | - | chr8.4:17531836-17531855 | None:intergenic | 30.0% | |
| TCTAATTATGTGCTTTGGTT+TGG | + | chr8.4:17529994-17530013 | MS.gene071623:intron | 30.0% | |
| TCTTTCTCAGTCATGTATAA+TGG | - | chr8.4:17532160-17532179 | None:intergenic | 30.0% | |
| TGAACTAATTGAGTAAGATC+TGG | - | chr8.4:17531443-17531462 | None:intergenic | 30.0% | |
| TGGATGTAGTGTTTCTTTAA+TGG | + | chr8.4:17532597-17532616 | MS.gene071623:intron | 30.0% | |
| TGTTAAAAAGAAGGTTAGGT+TGG | + | chr8.4:17530495-17530514 | MS.gene071623:intron | 30.0% | |
| TTGTTTAACAGTTTGTAGTG+AGG | + | chr8.4:17530209-17530228 | MS.gene071623:intron | 30.0% | |
| ! | ACCTAACCTTCTTTTTAACA+AGG | - | chr8.4:17530495-17530514 | None:intergenic | 30.0% |
| ! | AGTTTTTCTGACCATTTTCA+GGG | + | chr8.4:17530128-17530147 | MS.gene071623:intron | 30.0% |
| ! | ATACACGATTTAGGTTCAAA+AGG | + | chr8.4:17531886-17531905 | MS.gene071623:intron | 30.0% |
| ! | TCAAATGATAGGCCTTATAT+TGG | + | chr8.4:17532398-17532417 | MS.gene071623:intron | 30.0% |
| ! | TTTTTCATGAATGAGGATAG+TGG | + | chr8.4:17530759-17530778 | MS.gene071623:intron | 30.0% |
| !! | AGTGTATCTTTGTTTCTGTA+TGG | + | chr8.4:17532308-17532327 | MS.gene071623:intron | 30.0% |
| !! | CACTTTTTATCTCCAAATTG+TGG | - | chr8.4:17533256-17533275 | None:intergenic | 30.0% |
| !! | CTTATTCATGATGATTTGGT+TGG | - | chr8.4:17533630-17533649 | None:intergenic | 30.0% |
| !! | CTTTGTTTCACTCTAAAATG+CGG | - | chr8.4:17531496-17531515 | None:intergenic | 30.0% |
| !! | TCTTGAACATTTTCAAGCAT+TGG | + | chr8.4:17529923-17529942 | MS.gene071623:intron | 30.0% |
| !! | TGATTTATAAGTATTGGGCT+GGG | - | chr8.4:17529768-17529787 | None:intergenic | 30.0% |
| !! | TTTGAAAGCATCAAATCATC+TGG | - | chr8.4:17532383-17532402 | None:intergenic | 30.0% |
| !!! | AGTTTTGTTTCCAATAGGAT+AGG | + | chr8.4:17532731-17532750 | MS.gene071623:intron | 30.0% |
| !!! | CATTGGTTTTATGTTGACTT+CGG | - | chr8.4:17531244-17531263 | None:intergenic | 30.0% |
| !!! | GTATCACTTTTGAGTTGTTT+TGG | + | chr8.4:17533781-17533800 | MS.gene071623:intron | 30.0% |
| !!! | TGGCTATTTTTGAGTTAAGA+TGG | - | chr8.4:17531544-17531563 | None:intergenic | 30.0% |
| AACATTGAAATCCGATGATG+CGG | + | chr8.4:17530237-17530256 | MS.gene071623:CDS | 35.0% | |
| AACTCAAAAATAGCCAAGTC+TGG | + | chr8.4:17531548-17531567 | MS.gene071623:intron | 35.0% | |
| AAGATGGATGTTACTGTGAT+TGG | + | chr8.4:17530458-17530477 | MS.gene071623:CDS | 35.0% | |
| ACAGGAGATGATGATACAAA+TGG | + | chr8.4:17531962-17531981 | MS.gene071623:intron | 35.0% | |
| ACCATAGAATGGGAAAATCT+AGG | - | chr8.4:17530623-17530642 | None:intergenic | 35.0% | |
| ACTCAAAAATAGCCAAGTCT+GGG | + | chr8.4:17531549-17531568 | MS.gene071623:intron | 35.0% | |
| AGATACACTCTGATGGTAAT+AGG | - | chr8.4:17532297-17532316 | None:intergenic | 35.0% | |
| AGATTGATTGATACCTGGTA+TGG | + | chr8.4:17533035-17533054 | MS.gene071623:intron | 35.0% | |
| AGTGGACAGCAAAAATTCTT+AGG | - | chr8.4:17532507-17532526 | None:intergenic | 35.0% | |
| AGTGTCTATTGAACAAGAAC+AGG | + | chr8.4:17530966-17530985 | MS.gene071623:CDS | 35.0% | |
| ATTTCGTCTCTCAGAAGTAA+AGG | - | chr8.4:17529890-17529909 | None:intergenic | 35.0% | |
| CACAGAGACACTCTAATAAA+TGG | + | chr8.4:17531862-17531881 | MS.gene071623:intron | 35.0% | |
| CCAAATAGAGGATGAACTTA+AGG | + | chr8.4:17531009-17531028 | MS.gene071623:CDS | 35.0% | |
| CCTTAAGTTCATCCTCTATT+TGG | - | chr8.4:17531012-17531031 | None:intergenic | 35.0% | |
| CGAAGTCAACATAAAACCAA+TGG | + | chr8.4:17531242-17531261 | MS.gene071623:intron | 35.0% | |
| CTTGTTCAATAGACACTCTT+CGG | - | chr8.4:17530963-17530982 | None:intergenic | 35.0% | |
| GAAACAAAGATACACTCTGA+TGG | - | chr8.4:17532304-17532323 | None:intergenic | 35.0% | |
| GATGAACTTAAGGCATATCT+TGG | + | chr8.4:17531019-17531038 | MS.gene071623:CDS | 35.0% | |
| GCTCTTGTGATTAAACATCA+CGG | + | chr8.4:17530720-17530739 | MS.gene071623:intron | 35.0% | |
| GTCTAATAAATATCCCAGCT+TGG | - | chr8.4:17531837-17531856 | None:intergenic | 35.0% | |
| TAATACATGTTCCTGAAGGA+AGG | - | chr8.4:17530937-17530956 | None:intergenic | 35.0% | |
| TAGCAAGATTGATTGATACC+TGG | + | chr8.4:17533030-17533049 | MS.gene071623:intron | 35.0% | |
| TCAAAGAATTGCCCTGAAAA+TGG | - | chr8.4:17530142-17530161 | None:intergenic | 35.0% | |
| TCTTCAGATCTTTCATACTG+AGG | - | chr8.4:17532061-17532080 | None:intergenic | 35.0% | |
| TGACACTACCAATACATGTT+TGG | + | chr8.4:17530573-17530592 | MS.gene071623:intron | 35.0% | |
| TGACTGGACTTTCAATAGTT+GGG | + | chr8.4:17530279-17530298 | MS.gene071623:CDS | 35.0% | |
| TGATGTTTAATCACAAGAGC+TGG | - | chr8.4:17530720-17530739 | None:intergenic | 35.0% | |
| TGGCAAGAGAATAACTTATG+TGG | + | chr8.4:17531382-17531401 | MS.gene071623:intron | 35.0% | |
| TGGTTAAATGGTAACCTCAA+AGG | + | chr8.4:17532633-17532652 | MS.gene071623:intron | 35.0% | |
| TGTTTCTTTAATGGAGTCTC+TGG | + | chr8.4:17532606-17532625 | MS.gene071623:intron | 35.0% | |
| TTAAGGCATATCTTGGAGTT+AGG | + | chr8.4:17531026-17531045 | MS.gene071623:CDS | 35.0% | |
| TTATATAGCTGCATCTGCAA+TGG | - | chr8.4:17531277-17531296 | None:intergenic | 35.0% | |
| TTCATCTGAATCCTTCAAAG+TGG | - | chr8.4:17532525-17532544 | None:intergenic | 35.0% | |
| TTGACTGGACTTTCAATAGT+TGG | + | chr8.4:17530278-17530297 | MS.gene071623:CDS | 35.0% | |
| TTGGAGTTAGGAAGGTTATA+TGG | + | chr8.4:17531038-17531057 | MS.gene071623:CDS | 35.0% | |
| TTTCCAAGTGATGAAGTTTG+TGG | + | chr8.4:17533490-17533509 | MS.gene071623:intron | 35.0% | |
| TTTGAGTAAGAGCCAAATAG+AGG | + | chr8.4:17530997-17531016 | MS.gene071623:CDS | 35.0% | |
| ! | AAACACAAGTTGAGCATGAA+CGG | - | chr8.4:17529639-17529658 | None:intergenic | 35.0% |
| ! | AGTTTAAGATGTCATGTTCG+CGG | + | chr8.4:17532342-17532361 | MS.gene071623:intron | 35.0% |
| ! | ATTTATTCACGTTCTAGCTG+TGG | + | chr8.4:17530533-17530552 | MS.gene071623:intron | 35.0% |
| ! | CATTTATTAGAGTGTCTCTG+TGG | - | chr8.4:17531864-17531883 | None:intergenic | 35.0% |
| ! | GAGTTTTTCTGACCATTTTC+AGG | + | chr8.4:17530127-17530146 | MS.gene071623:intron | 35.0% |
| ! | GCCTTGTTAAAAAGAAGGTT+AGG | + | chr8.4:17530491-17530510 | MS.gene071623:intron | 35.0% |
| ! | GGTCTATATAGTTTTCCATG+TGG | - | chr8.4:17532486-17532505 | None:intergenic | 35.0% |
| ! | TAGCAATTTTTCCTTCCTTC+AGG | + | chr8.4:17530923-17530942 | MS.gene071623:intron | 35.0% |
| ! | TCCTAGATTTTCCCATTCTA+TGG | + | chr8.4:17530619-17530638 | MS.gene071623:CDS | 35.0% |
| !! | ATTTGGCTCTTACTCAAATG+TGG | - | chr8.4:17530995-17531014 | None:intergenic | 35.0% |
| !! | ATTTTTGCTGTCCACTTTGA+AGG | + | chr8.4:17532511-17532530 | MS.gene071623:intron | 35.0% |
| !! | CTGATTTATAAGTATTGGGC+TGG | - | chr8.4:17529769-17529788 | None:intergenic | 35.0% |
| !! | GTTCGGTTCATGATTTTAGT+GGG | + | chr8.4:17530016-17530035 | MS.gene071623:intron | 35.0% |
| !! | TTATGTGCTTTGGTTTGGTT+CGG | + | chr8.4:17529999-17530018 | MS.gene071623:intron | 35.0% |
| !! | TTTGGCTCTTACTCAAATGT+GGG | - | chr8.4:17530994-17531013 | None:intergenic | 35.0% |
| !! | TTTGTTGATTCCTAGGTTGT+GGG | + | chr8.4:17533827-17533846 | MS.gene071623:intron | 35.0% |
| !!! | AAGCCAGTTTTGTTTCCAAT+AGG | + | chr8.4:17532726-17532745 | MS.gene071623:intron | 35.0% |
| !!! | ATAACATGTGCTGTTTTGTG+AGG | + | chr8.4:17531993-17532012 | MS.gene071623:CDS | 35.0% |
| AAGGTTATATGGTTGCCTCA+TGG | + | chr8.4:17531049-17531068 | MS.gene071623:CDS | 40.0% | |
| AAGTTATTCTCTTGCCAGAG+TGG | - | chr8.4:17531379-17531398 | None:intergenic | 40.0% | |
| ATGGTCAGAAAAACTCACAG+TGG | - | chr8.4:17530123-17530142 | None:intergenic | 40.0% | |
| ATTCAAAGAAGTTCCCAAGC+TGG | + | chr8.4:17531820-17531839 | MS.gene071623:intron | 40.0% | |
| CAAATTCTAATATGGGGCCA+TGG | - | chr8.4:17529950-17529969 | None:intergenic | 40.0% | |
| CACTAACTACTGCAGTTATG+TGG | + | chr8.4:17533439-17533458 | MS.gene071623:intron | 40.0% | |
| CCTGAAGACAAAAGAGTAGA+CGG | - | chr8.4:17530827-17530846 | None:intergenic | 40.0% | |
| GACTGGACTTTCAATAGTTG+GGG | + | chr8.4:17530280-17530299 | MS.gene071623:CDS | 40.0% | |
| GATATTGGGCATGCAATCTT+TGG | + | chr8.4:17532889-17532908 | MS.gene071623:intron | 40.0% | |
| GATTCAACACAAGAACAGAC+AGG | - | chr8.4:17531357-17531376 | None:intergenic | 40.0% | |
| GATTCTTGGTTTCGTGACAT+TGG | + | chr8.4:17530095-17530114 | MS.gene071623:CDS | 40.0% | |
| GCAATGGTTCATTACTCCAT+TGG | - | chr8.4:17531261-17531280 | None:intergenic | 40.0% | |
| GCGAAACACATATCATTGGA+CGG | + | chr8.4:17532457-17532476 | MS.gene071623:intron | 40.0% | |
| GCTATCACCATGTACTTATG+AGG | + | chr8.4:17531415-17531434 | MS.gene071623:intron | 40.0% | |
| GCTATCATTGCTCCACAATT+TGG | + | chr8.4:17533241-17533260 | MS.gene071623:CDS | 40.0% | |
| GGAAGGTCTTAGACAGAATT+CGG | - | chr8.4:17533294-17533313 | None:intergenic | 40.0% | |
| GTGGTAATACATGTTCCTGA+AGG | - | chr8.4:17530941-17530960 | None:intergenic | 40.0% | |
| TAAACCTCTACTGGATGTTC+TGG | + | chr8.4:17533123-17533142 | MS.gene071623:intron | 40.0% | |
| TAGTTTGAGCCACAGATCTT+CGG | - | chr8.4:17533516-17533535 | None:intergenic | 40.0% | |
| TCAACGACTCTAACATGATC+CGG | - | chr8.4:17530062-17530081 | None:intergenic | 40.0% | |
| TGCAGGATAGTCTCATCATT+AGG | - | chr8.4:17532977-17532996 | None:intergenic | 40.0% | |
| TGGTCAGAAAAACTCACAGT+GGG | - | chr8.4:17530122-17530141 | None:intergenic | 40.0% | |
| TGTCGCGAAACACATATCAT+TGG | + | chr8.4:17532453-17532472 | MS.gene071623:intron | 40.0% | |
| TTCAAAGAAGTTCCCAAGCT+GGG | + | chr8.4:17531821-17531840 | MS.gene071623:intron | 40.0% | |
| TTCTTGTGTTGAATCCACTC+TGG | + | chr8.4:17531362-17531381 | MS.gene071623:intron | 40.0% | |
| ! | AGATTAGCTCCAACGATTCT+TGG | + | chr8.4:17530081-17530100 | MS.gene071623:CDS | 40.0% |
| ! | ATCATTTTCACGGTTGAGAC+AGG | - | chr8.4:17529863-17529882 | None:intergenic | 40.0% |
| ! | GAATGAGGATAGTGGCAATT+AGG | + | chr8.4:17530767-17530786 | MS.gene071623:intron | 40.0% |
| ! | GATTTGGTTGGATGAGAACA+TGG | - | chr8.4:17533618-17533637 | None:intergenic | 40.0% |
| ! | GGTAGATTTTGGATGTTGAG+AGG | + | chr8.4:17530594-17530613 | MS.gene071623:intron | 40.0% |
| ! | TCTGGAACCTCATAAGTACA+TGG | - | chr8.4:17531425-17531444 | None:intergenic | 40.0% |
| ! | TGGTTGCCTCATGGATTATA+TGG | + | chr8.4:17531058-17531077 | MS.gene071623:CDS | 40.0% |
| !! | CGACAGCCTTGTTAAAAAGA+AGG | + | chr8.4:17530486-17530505 | MS.gene071623:CDS | 40.0% |
| !! | CTCAGTCATGTATAATGGAC+CGG | - | chr8.4:17532155-17532174 | None:intergenic | 40.0% |
| !! | GGTTCGGTTCATGATTTTAG+TGG | + | chr8.4:17530015-17530034 | MS.gene071623:intron | 40.0% |
| !! | GTTTGTTGATTCCTAGGTTG+TGG | + | chr8.4:17533826-17533845 | MS.gene071623:intron | 40.0% |
| !! | TCAGTCATGTATAATGGACC+GGG | - | chr8.4:17532154-17532173 | None:intergenic | 40.0% |
| !! | TTGAATCAGGAAGTTGGTAG+TGG | + | chr8.4:17531619-17531638 | MS.gene071623:intron | 40.0% |
| !!! | CATTTTCAAGCATTGGTCCA+TGG | + | chr8.4:17529930-17529949 | MS.gene071623:intron | 40.0% |
| AATCCTATGCTCCGCATCAT+CGG | - | chr8.4:17530251-17530270 | None:intergenic | 45.0% | |
| ACCTGACAAAACAATCTCCC+TGG | - | chr8.4:17533864-17533883 | None:intergenic | 45.0% | |
| ACCTTCAATTCCCACAACCT+AGG | - | chr8.4:17533840-17533859 | None:intergenic | 45.0% | |
| ACTCACTTCATGATGAGGGA+AGG | - | chr8.4:17533311-17533330 | None:intergenic | 45.0% | |
| AGCATCCATGTAGATGGAGA+AGG | + | chr8.4:17530656-17530675 | MS.gene071623:CDS | 45.0% | |
| ATAGGATTGCGGGAATTGAC+TGG | + | chr8.4:17530263-17530282 | MS.gene071623:CDS | 45.0% | |
| ATCATTGGACGGATACCACA+TGG | + | chr8.4:17532468-17532487 | MS.gene071623:intron | 45.0% | |
| CAAGTTGCTCAACCAGTTCA+TGG | + | chr8.4:17531297-17531316 | MS.gene071623:intron | 45.0% | |
| CATTCTATGGTGCTTGAAGG+CGG | + | chr8.4:17530632-17530651 | MS.gene071623:CDS | 45.0% | |
| CTGAGCTGAACTAGCACAAA+CGG | - | chr8.4:17529702-17529721 | None:intergenic | 45.0% | |
| GAATGCTGGTAGTTAGCAGT+CGG | + | chr8.4:17532911-17532930 | MS.gene071623:intron | 45.0% | |
| GCAATCATAGGGTTACCACT+GGG | - | chr8.4:17532659-17532678 | None:intergenic | 45.0% | |
| GCCTTCAAGCACCATAGAAT+GGG | - | chr8.4:17530633-17530652 | None:intergenic | 45.0% | |
| GCTGAGAGCAAAACAATGAG+AGG | - | chr8.4:17532825-17532844 | None:intergenic | 45.0% | |
| GGCATATCTTGGAGTTAGGA+AGG | + | chr8.4:17531030-17531049 | MS.gene071623:CDS | 45.0% | |
| GGGAACTTCTTTGAATGCTG+TGG | - | chr8.4:17531816-17531835 | None:intergenic | 45.0% | |
| GTCACGAAACCAAGAATCGT+TGG | - | chr8.4:17530093-17530112 | None:intergenic | 45.0% | |
| GTCTCTGGTGTCTGGTTAAA+TGG | + | chr8.4:17532621-17532640 | MS.gene071623:intron | 45.0% | |
| GTGATCAAACTCCATGTTCC+CGG | + | chr8.4:17532133-17532152 | MS.gene071623:CDS | 45.0% | |
| GTTCAATAGACACTCTTCGG+TGG | - | chr8.4:17530960-17530979 | None:intergenic | 45.0% | |
| TACACCAGAACATCCAGTAG+AGG | - | chr8.4:17533130-17533149 | None:intergenic | 45.0% | |
| TCAACTTGTGTTTGCCAGAG+TGG | + | chr8.4:17529646-17529665 | MS.gene071623:CDS | 45.0% | |
| TCCCATTCTATGGTGCTTGA+AGG | + | chr8.4:17530629-17530648 | MS.gene071623:CDS | 45.0% | |
| TCCTAGGTTGTGGGAATTGA+AGG | + | chr8.4:17533836-17533855 | MS.gene071623:intron | 45.0% | |
| TCTCACCTTCTCCATCTACA+TGG | - | chr8.4:17530664-17530683 | None:intergenic | 45.0% | |
| TGCAATCATAGGGTTACCAC+TGG | - | chr8.4:17532660-17532679 | None:intergenic | 45.0% | |
| TGGACTTTCAATAGTTGGGG+AGG | + | chr8.4:17530283-17530302 | MS.gene071623:CDS | 45.0% | |
| TGGGACATTTGCGAGTTTGT+GGG | - | chr8.4:17533679-17533698 | None:intergenic | 45.0% | |
| TGTGGGAATTGAAGGTTCCA+GGG | + | chr8.4:17533844-17533863 | MS.gene071623:CDS | 45.0% | |
| TTAATGGAGTCTCTGGTGTC+TGG | + | chr8.4:17532613-17532632 | MS.gene071623:intron | 45.0% | |
| TTGGGACATTTGCGAGTTTG+TGG | - | chr8.4:17533680-17533699 | None:intergenic | 45.0% | |
| TTGTGGGAATTGAAGGTTCC+AGG | + | chr8.4:17533843-17533862 | MS.gene071623:CDS | 45.0% | |
| ! | CCGTCTACTCTTTTGTCTTC+AGG | + | chr8.4:17530824-17530843 | MS.gene071623:intron | 45.0% |
| ! | GTTCGCGGTTTTCTTTTCTG+TGG | + | chr8.4:17532357-17532376 | MS.gene071623:intron | 45.0% |
| !! | AGGGAGATTGTTTTGTCAGG+TGG | + | chr8.4:17533863-17533882 | MS.gene071623:CDS | 45.0% |
| !! | GATTTTAGTGGGAGAATGCC+CGG | + | chr8.4:17530027-17530046 | MS.gene071623:intron | 45.0% |
| !! | GCATGCAATCTTTGGAATGC+TGG | + | chr8.4:17532897-17532916 | MS.gene071623:intron | 45.0% |
| !! | TCCAGGGAGATTGTTTTGTC+AGG | + | chr8.4:17533860-17533879 | MS.gene071623:CDS | 45.0% |
| !! | TGTATAATGGACCGGGAACA+TGG | - | chr8.4:17532147-17532166 | None:intergenic | 45.0% |
| !!! | TTATAGATTTTTTTTTTTTT+GGG | + | chr8.4:17531192-17531211 | MS.gene071623:intron | 5.0% |
| !!! | TTTAATTTTAATTATAAAGT+CGG | - | chr8.4:17529840-17529859 | None:intergenic | 5.0% |
| !!! | TTTATAGATTTTTTTTTTTT+TGG | + | chr8.4:17531191-17531210 | MS.gene071623:intron | 5.0% |
| AATCCGATGATGCGGAGCAT+AGG | + | chr8.4:17530245-17530264 | MS.gene071623:CDS | 50.0% | |
| ACTTGTGTTTGCCAGAGTGG+CGG | + | chr8.4:17529649-17529668 | MS.gene071623:CDS | 50.0% | |
| AGTCTAGTACCAGGAAGCCT+TGG | - | chr8.4:17533184-17533203 | None:intergenic | 50.0% | |
| AGTTTGTGGCCGAAGATCTG+TGG | + | chr8.4:17533504-17533523 | MS.gene071623:intron | 50.0% | |
| ATGACTGAGAAAGAGGCTGC+TGG | + | chr8.4:17532166-17532185 | MS.gene071623:CDS | 50.0% | |
| CAAGACAGAAGAACCACACC+AGG | - | chr8.4:17532019-17532038 | None:intergenic | 50.0% | |
| CGCCTTCAAGCACCATAGAA+TGG | - | chr8.4:17530634-17530653 | None:intergenic | 50.0% | |
| CGGCCACAAACTTCATCACT+TGG | - | chr8.4:17533496-17533515 | None:intergenic | 50.0% | |
| CGTTTGTGCTAGTTCAGCTC+AGG | + | chr8.4:17529700-17529719 | MS.gene071623:CDS | 50.0% | |
| CTGGTGTGGTTCTTCTGTCT+TGG | + | chr8.4:17532017-17532036 | MS.gene071623:CDS | 50.0% | |
| GAAGCAGCAAGTCTAGTACC+AGG | - | chr8.4:17533193-17533212 | None:intergenic | 50.0% | |
| TGACTGAGAAAGAGGCTGCT+GGG | + | chr8.4:17532167-17532186 | MS.gene071623:CDS | 50.0% | |
| TGATGCGGAGCATAGGATTG+CGG | + | chr8.4:17530252-17530271 | MS.gene071623:CDS | 50.0% | |
| TGTGCTAGTTCAGCTCAGGT+TGG | + | chr8.4:17529704-17529723 | MS.gene071623:intron | 50.0% | |
| ! | ATGATCCGGTAGCTGATTCC+GGG | - | chr8.4:17530048-17530067 | None:intergenic | 50.0% |
| ! | CATGATCCGGTAGCTGATTC+CGG | - | chr8.4:17530049-17530068 | None:intergenic | 50.0% |
| !!! | ATGTGCTGTTTTGTGAGGCC+TGG | + | chr8.4:17531998-17532017 | MS.gene071623:CDS | 50.0% |
| AGTACCAGGAAGCCTTGGCT+TGG | - | chr8.4:17533179-17533198 | None:intergenic | 55.0% | |
| GAATGCCCGGAATCAGCTAC+CGG | + | chr8.4:17530040-17530059 | MS.gene071623:CDS | 55.0% | |
| GACTGAGAAAGAGGCTGCTG+GGG | + | chr8.4:17532168-17532187 | MS.gene071623:CDS | 55.0% | |
| GATGCGGAGCATAGGATTGC+GGG | + | chr8.4:17530253-17530272 | MS.gene071623:CDS | 55.0% | |
| GGCACCGTCACGCCAATTAT+CGG | - | chr8.4:17529618-17529637 | None:intergenic | 55.0% | |
| TGGTAACCTCAAAGGCCCAG+TGG | + | chr8.4:17532641-17532660 | MS.gene071623:intron | 55.0% | |
| ! | AAGAGGCTGCTGGGGTTTTC+AGG | + | chr8.4:17532176-17532195 | MS.gene071623:intron | 55.0% |
| ! | CTGTTTTGTGAGGCCTGGTG+TGG | + | chr8.4:17532003-17532022 | MS.gene071623:CDS | 55.0% |
| !! | AGGATGATGGAGCCAAGCCA+AGG | + | chr8.4:17533164-17533183 | MS.gene071623:intron | 55.0% |
| !! | GGCGGAAGCATCCATGTAGA+TGG | + | chr8.4:17530650-17530669 | MS.gene071623:CDS | 55.0% |
| AGAGATTGCAGCCGCCACTC+TGG | - | chr8.4:17529663-17529682 | None:intergenic | 60.0% | |
| GGGTTACCACTGGGCCTTTG+AGG | - | chr8.4:17532650-17532669 | None:intergenic | 60.0% | |
| ! | CGCGCCGATAATTGGCGTGA+CGG | + | chr8.4:17529611-17529630 | MS.gene071623:CDS | 60.0% |
| GGAGCCAAGCCAAGGCTTCC+TGG | + | chr8.4:17533172-17533191 | MS.gene071623:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 17529608 | 17533925 | 17529608 | ID=MS.gene071623 |
| chr8.4 | mRNA | 17529608 | 17533925 | 17529608 | ID=MS.gene071623.t1;Parent=MS.gene071623 |
| chr8.4 | exon | 17529608 | 17529721 | 17529608 | ID=MS.gene071623.t1.exon1;Parent=MS.gene071623.t1 |
| chr8.4 | CDS | 17529608 | 17529721 | 17529608 | ID=cds.MS.gene071623.t1;Parent=MS.gene071623.t1 |
| chr8.4 | exon | 17530035 | 17530124 | 17530035 | ID=MS.gene071623.t1.exon2;Parent=MS.gene071623.t1 |
| chr8.4 | CDS | 17530035 | 17530124 | 17530035 | ID=cds.MS.gene071623.t1;Parent=MS.gene071623.t1 |
| chr8.4 | exon | 17530220 | 17530304 | 17530220 | ID=MS.gene071623.t1.exon3;Parent=MS.gene071623.t1 |
| chr8.4 | CDS | 17530220 | 17530304 | 17530220 | ID=cds.MS.gene071623.t1;Parent=MS.gene071623.t1 |
| chr8.4 | exon | 17530452 | 17530507 | 17530452 | ID=MS.gene071623.t1.exon4;Parent=MS.gene071623.t1 |
| chr8.4 | CDS | 17530452 | 17530507 | 17530452 | ID=cds.MS.gene071623.t1;Parent=MS.gene071623.t1 |
| chr8.4 | exon | 17530599 | 17530677 | 17530599 | ID=MS.gene071623.t1.exon5;Parent=MS.gene071623.t1 |
| chr8.4 | CDS | 17530599 | 17530677 | 17530599 | ID=cds.MS.gene071623.t1;Parent=MS.gene071623.t1 |
| chr8.4 | exon | 17530945 | 17531079 | 17530945 | ID=MS.gene071623.t1.exon6;Parent=MS.gene071623.t1 |
| chr8.4 | CDS | 17530945 | 17531079 | 17530945 | ID=cds.MS.gene071623.t1;Parent=MS.gene071623.t1 |
| chr8.4 | exon | 17531966 | 17532189 | 17531966 | ID=MS.gene071623.t1.exon7;Parent=MS.gene071623.t1 |
| chr8.4 | CDS | 17531966 | 17532189 | 17531966 | ID=cds.MS.gene071623.t1;Parent=MS.gene071623.t1 |
| chr8.4 | exon | 17533166 | 17533324 | 17533166 | ID=MS.gene071623.t1.exon8;Parent=MS.gene071623.t1 |
| chr8.4 | CDS | 17533166 | 17533324 | 17533166 | ID=cds.MS.gene071623.t1;Parent=MS.gene071623.t1 |
| chr8.4 | exon | 17533842 | 17533925 | 17533842 | ID=MS.gene071623.t1.exon9;Parent=MS.gene071623.t1 |
| chr8.4 | CDS | 17533842 | 17533925 | 17533842 | ID=cds.MS.gene071623.t1;Parent=MS.gene071623.t1 |
| Gene Sequence |
| Protein sequence |
