Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071624.t1 | 6NIB_A | 94.2 | 344 | 5 | 1 | 1 | 329 | 24 | 367 | 1.00E-191 | 679.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071624.t1 | Q8GWW7 | 69.7 | 343 | 89 | 1 | 1 | 328 | 31 | 373 | 4.4e-143 | 508.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071624.t1 | G7JT50 | 94.2 | 344 | 5 | 1 | 1 | 329 | 31 | 374 | 7.4e-192 | 679.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050670 | MS.gene071624 | 0.800026 | 1.75E-48 | -1.69E-46 |
| MS.gene051525 | MS.gene071624 | 0.81566 | 8.25E-52 | -1.69E-46 |
| MS.gene051588 | MS.gene071624 | 0.814415 | 1.56E-51 | -1.69E-46 |
| MS.gene053169 | MS.gene071624 | 0.809508 | 1.83E-50 | -1.69E-46 |
| MS.gene054920 | MS.gene071624 | 0.808763 | 2.64E-50 | -1.69E-46 |
| MS.gene055909 | MS.gene071624 | 0.809601 | 1.75E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene071624 | 0.810847 | 9.41E-51 | -1.69E-46 |
| MS.gene056514 | MS.gene071624 | 0.815588 | 8.56E-52 | -1.69E-46 |
| MS.gene058529 | MS.gene071624 | 0.805085 | 1.58E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene071624 | 0.820315 | 7.32E-53 | -1.69E-46 |
| MS.gene059082 | MS.gene071624 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene071624 | 0.80327 | 3.78E-49 | -1.69E-46 |
| MS.gene059462 | MS.gene071624 | 0.803984 | 2.69E-49 | -1.69E-46 |
| MS.gene059540 | MS.gene071624 | -0.813511 | 2.47E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene071624 | 0.80776 | 4.32E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071624.t1 | MTR_4g112810 | 94.186 | 344 | 5 | 1 | 1 | 329 | 31 | 374 | 0.0 | 664 |
| MS.gene071624.t1 | MTR_4g110140 | 57.584 | 356 | 89 | 6 | 1 | 307 | 31 | 373 | 1.34e-126 | 369 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071624.t1 | AT5G08170 | 69.679 | 343 | 89 | 1 | 1 | 328 | 25 | 367 | 1.44e-179 | 501 |
| MS.gene071624.t1 | AT5G08170 | 69.679 | 343 | 89 | 1 | 1 | 328 | 31 | 373 | 1.91e-178 | 499 |
| MS.gene071624.t1 | AT5G08170 | 69.204 | 289 | 74 | 1 | 55 | 328 | 1 | 289 | 1.72e-149 | 422 |
| MS.gene071624.t1 | AT5G08170 | 69.204 | 289 | 74 | 1 | 55 | 328 | 1 | 289 | 1.72e-149 | 422 |
| MS.gene071624.t1 | AT5G08170 | 69.204 | 289 | 74 | 1 | 55 | 328 | 1 | 289 | 1.72e-149 | 422 |
Find 81 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATCATTGCTCCACAATT+TGG | 0.199735 | 8.4:-17547573 | MS.gene071624:CDS |
| CCTTAAGTTCATCCTCTATT+TGG | 0.200717 | 8.4:+17549804 | None:intergenic |
| AGATTAGCTCCAACGATTCT+TGG | 0.296878 | 8.4:-17550733 | MS.gene071624:CDS |
| CATGATCCGGTAGCTGATTC+CGG | 0.299009 | 8.4:+17550768 | None:intergenic |
| GTTGAGAGAATATTTCTAAA+TGG | 0.323501 | 8.4:+17546897 | None:intergenic |
| TGGTTGCCTCATGGATTATA+TGG | 0.334289 | 8.4:-17549755 | MS.gene071624:intron |
| TTGGAGTTAGGAAGGTTATA+TGG | 0.342843 | 8.4:-17549775 | MS.gene071624:CDS |
| TTGTGGGAATTGAAGGTTCC+AGG | 0.350594 | 8.4:-17546972 | MS.gene071624:CDS |
| TTAAGGCATATCTTGGAGTT+AGG | 0.360625 | 8.4:-17549787 | MS.gene071624:CDS |
| GACAGGAACGCGCCGATAAT+TGG | 0.368550 | 8.4:-17551211 | None:intergenic |
| TGACTGGACTTTCAATAGTT+GGG | 0.371650 | 8.4:-17550535 | MS.gene071624:CDS |
| GGAGCCAAGCCAAGGCTTCC+TGG | 0.371687 | 8.4:-17547642 | MS.gene071624:CDS |
| TCTTTCTCAGTCATGTATAA+TGG | 0.381846 | 8.4:+17548658 | None:intergenic |
| TCCTAGGTTGTGGGAATTGA+AGG | 0.384816 | 8.4:-17546979 | MS.gene071624:intron |
| TTGACTGGACTTTCAATAGT+TGG | 0.389120 | 8.4:-17550536 | MS.gene071624:CDS |
| TCCCATTCTATGGTGCTTGA+AGG | 0.402654 | 8.4:-17550185 | MS.gene071624:CDS |
| GGAAGGTCTTAGACAGAATT+CGG | 0.404780 | 8.4:+17547523 | None:intergenic |
| AAGATGGATGTTACTGTGAT+TGG | 0.407228 | 8.4:-17550356 | MS.gene071624:CDS |
| CTTGTTCAATAGACACTCTT+CGG | 0.412003 | 8.4:+17549853 | None:intergenic |
| ACCATAGAATGGGAAAATCT+AGG | 0.420979 | 8.4:+17550194 | None:intergenic |
| GGCACCGTCACGCCAATTAT+CGG | 0.422589 | 8.4:+17551199 | None:intergenic |
| GATGAACTTAAGGCATATCT+TGG | 0.425040 | 8.4:-17549794 | MS.gene071624:CDS |
| CGCCTTCAAGCACCATAGAA+TGG | 0.425702 | 8.4:+17550183 | None:intergenic |
| CCAAATAGAGGATGAACTTA+AGG | 0.428188 | 8.4:-17549804 | MS.gene071624:CDS |
| GATGCGGAGCATAGGATTGC+GGG | 0.431755 | 8.4:-17550561 | MS.gene071624:CDS |
| ATGATCCGGTAGCTGATTCC+GGG | 0.431760 | 8.4:+17550769 | None:intergenic |
| ATTTGGCTCTTACTCAAATG+TGG | 0.433728 | 8.4:+17549821 | None:intergenic |
| CTCAGTCATGTATAATGGAC+CGG | 0.444715 | 8.4:+17548663 | None:intergenic |
| GGCGGAAGCATCCATGTAGA+TGG | 0.446962 | 8.4:-17550164 | MS.gene071624:CDS |
| GTGATCAAACTCCATGTTCC+CGG | 0.448519 | 8.4:-17548682 | MS.gene071624:CDS |
| TCAAGTATAACTGATGCTAA+TGG | 0.454381 | 8.4:-17548718 | MS.gene071624:CDS |
| AGAGAATATTTCTAAATGGC+TGG | 0.455579 | 8.4:+17546901 | None:intergenic |
| AAATGTTTAGGTTTAGAAGA+TGG | 0.456598 | 8.4:-17550372 | MS.gene071624:intron |
| GCCTTCAAGCACCATAGAAT+GGG | 0.457536 | 8.4:+17550184 | None:intergenic |
| AGTGTCTATTGAACAAGAAC+AGG | 0.457681 | 8.4:-17549847 | MS.gene071624:CDS |
| CGTTTGTGCTAGTTCAGCTC+AGG | 0.468384 | 8.4:-17551114 | MS.gene071624:intron |
| TTTGGCTCTTACTCAAATGT+GGG | 0.487275 | 8.4:+17549822 | None:intergenic |
| ATTATACATGACTGAGAAAG+AGG | 0.489453 | 8.4:-17548656 | MS.gene071624:CDS |
| AATCCTATGCTCCGCATCAT+CGG | 0.491261 | 8.4:+17550566 | None:intergenic |
| ATAGGATTGCGGGAATTGAC+TGG | 0.492124 | 8.4:-17550551 | MS.gene071624:CDS |
| TGTATAATGGACCGGGAACA+TGG | 0.510017 | 8.4:+17548671 | None:intergenic |
| AGAGATTGCAGCCGCCACTC+TGG | 0.511265 | 8.4:+17551154 | None:intergenic |
| CTGAGCTGAACTAGCACAAA+CGG | 0.515091 | 8.4:+17551115 | None:intergenic |
| AGTACCAGGAAGCCTTGGCT+TGG | 0.515607 | 8.4:+17547638 | None:intergenic |
| GGCATATCTTGGAGTTAGGA+AGG | 0.517285 | 8.4:-17549783 | MS.gene071624:CDS |
| TCAACGACTCTAACATGATC+CGG | 0.518148 | 8.4:+17550755 | None:intergenic |
| ATGACTGAGAAAGAGGCTGC+TGG | 0.520293 | 8.4:-17548649 | MS.gene071624:CDS |
| ACCTGACAAAACAATCTCCC+TGG | 0.521534 | 8.4:+17546954 | None:intergenic |
| TGACTGAGAAAGAGGCTGCT+GGG | 0.523464 | 8.4:-17548648 | MS.gene071624:CDS |
| AGTCTAGTACCAGGAAGCCT+TGG | 0.524063 | 8.4:+17547633 | None:intergenic |
| GACTGGACTTTCAATAGTTG+GGG | 0.526517 | 8.4:-17550534 | MS.gene071624:CDS |
| GTCACGAAACCAAGAATCGT+TGG | 0.536081 | 8.4:+17550724 | None:intergenic |
| GACTGAGAAAGAGGCTGCTG+GGG | 0.537133 | 8.4:-17548647 | MS.gene071624:CDS |
| AAACACAAGTTGAGCATGAA+CGG | 0.539621 | 8.4:+17551178 | None:intergenic |
| AAGGTTATATGGTTGCCTCA+TGG | 0.541390 | 8.4:-17549764 | MS.gene071624:CDS |
| TTTGAGTAAGAGCCAAATAG+AGG | 0.541729 | 8.4:-17549816 | MS.gene071624:CDS |
| ACAGGAGATGATGATACAAA+TGG | 0.542165 | 8.4:-17548852 | MS.gene071624:intron |
| GATTCTTGGTTTCGTGACAT+TGG | 0.542389 | 8.4:-17550719 | MS.gene071624:CDS |
| TGCAATGTAAAAGTTTACAT+AGG | 0.549734 | 8.4:+17547602 | None:intergenic |
| CGCGCCGATAATTGGCGTGA+CGG | 0.553368 | 8.4:-17551203 | MS.gene071624:CDS |
| TTTGTTGATTCCTAGGTTGT+GGG | 0.556323 | 8.4:-17546988 | MS.gene071624:intron |
| AAAATACTCACTTCATGATG+AGG | 0.559236 | 8.4:+17547501 | None:intergenic |
| TTGTTTAACAGTTTGTAGTG+AGG | 0.572818 | 8.4:-17550605 | MS.gene071624:intron |
| AATCCGATGATGCGGAGCAT+AGG | 0.574874 | 8.4:-17550569 | MS.gene071624:CDS |
| TCTCACCTTCTCCATCTACA+TGG | 0.576000 | 8.4:+17550153 | None:intergenic |
| TGTGGGAATTGAAGGTTCCA+GGG | 0.582236 | 8.4:-17546971 | MS.gene071624:CDS |
| CATTCTATGGTGCTTGAAGG+CGG | 0.592030 | 8.4:-17550182 | MS.gene071624:CDS |
| AACATTGAAATCCGATGATG+CGG | 0.592828 | 8.4:-17550577 | MS.gene071624:CDS |
| GAATGCCCGGAATCAGCTAC+CGG | 0.593981 | 8.4:-17550774 | MS.gene071624:CDS |
| AAATACTCACTTCATGATGA+GGG | 0.594366 | 8.4:+17547502 | None:intergenic |
| TCAACTTGTGTTTGCCAGAG+TGG | 0.603974 | 8.4:-17551168 | MS.gene071624:CDS |
| GAAGCAGCAAGTCTAGTACC+AGG | 0.605026 | 8.4:+17547624 | None:intergenic |
| AGGATGATGGAGCCAAGCCA+AGG | 0.607977 | 8.4:-17547650 | MS.gene071624:CDS |
| TGGACTTTCAATAGTTGGGG+AGG | 0.614804 | 8.4:-17550531 | MS.gene071624:intron |
| AGCATCCATGTAGATGGAGA+AGG | 0.617041 | 8.4:-17550158 | MS.gene071624:intron |
| TCAGTCATGTATAATGGACC+GGG | 0.622248 | 8.4:+17548664 | None:intergenic |
| ACTCACTTCATGATGAGGGA+AGG | 0.632244 | 8.4:+17547506 | None:intergenic |
| TGATGCGGAGCATAGGATTG+CGG | 0.633163 | 8.4:-17550562 | MS.gene071624:CDS |
| ACTTGTGTTTGCCAGAGTGG+CGG | 0.660221 | 8.4:-17551165 | MS.gene071624:CDS |
| GTTCAATAGACACTCTTCGG+TGG | 0.670209 | 8.4:+17549856 | None:intergenic |
| TACATACCATATAATCCATG+AGG | 0.692612 | 8.4:+17549749 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAATTTATTTTTTT+TGG | - | chr8.4:17550634-17550653 | MS.gene071624:intron | 0.0% |
| !! | ATAAATTAGATTTAGATATT+GGG | - | chr8.4:17550179-17550198 | MS.gene071624:CDS | 10.0% |
| !! | AATTTCTGATTTATAAGTAT+TGG | + | chr8.4:17547078-17547097 | None:intergenic | 15.0% |
| !! | ACGATTTATAACAATTAAAA+TGG | + | chr8.4:17547046-17547065 | None:intergenic | 15.0% |
| !! | ATCTATAAAATCATGATAAA+TGG | + | chr8.4:17548484-17548503 | None:intergenic | 15.0% |
| !! | ATTTCTGATTTATAAGTATT+GGG | + | chr8.4:17547077-17547096 | None:intergenic | 15.0% |
| !! | CATAAATTAGATTTAGATAT+TGG | - | chr8.4:17550178-17550197 | MS.gene071624:CDS | 15.0% |
| !! | TTCATGAAAAAATTACATTT+AGG | + | chr8.4:17548054-17548073 | None:intergenic | 15.0% |
| !!! | ATTTTAATTGTTATAAATCG+TGG | - | chr8.4:17547045-17547064 | MS.gene071624:intron | 15.0% |
| !!! | TCTACAATAATTTGATAATT+AGG | - | chr8.4:17549986-17550005 | MS.gene071624:intron | 15.0% |
| !!! | TTGAGTTTTATAAAATGTTT+AGG | - | chr8.4:17547734-17547753 | MS.gene071624:intron | 15.0% |
| !! | AAAAAGAAAGAAACACAATT+TGG | + | chr8.4:17549513-17549532 | None:intergenic | 20.0% |
| !! | AGCAATAATATCAATTCATA+GGG | + | chr8.4:17548427-17548446 | None:intergenic | 20.0% |
| !! | ATACTTCTTAATAACAACAT+AGG | + | chr8.4:17549236-17549255 | None:intergenic | 20.0% |
| !! | ATGAAAAAATTACATTTAGG+TGG | + | chr8.4:17548051-17548070 | None:intergenic | 20.0% |
| !! | CATTAAGAGTTAAATATAAC+TGG | + | chr8.4:17549536-17549555 | None:intergenic | 20.0% |
| !! | GTAGAATAAAAATACAATTG+AGG | + | chr8.4:17548901-17548920 | None:intergenic | 20.0% |
| !! | TAAATCAGAAATTATAACGA+TGG | - | chr8.4:17547085-17547104 | MS.gene071624:intron | 20.0% |
| !! | TAATAGGCAAATTCTAATAT+GGG | + | chr8.4:17547261-17547280 | None:intergenic | 20.0% |
| !! | TCAATTTGAAGACTAATTAA+TGG | - | chr8.4:17547650-17547669 | MS.gene071624:CDS | 20.0% |
| !! | TTGAATTGATTATTATGTCT+TGG | - | chr8.4:17547692-17547711 | MS.gene071624:intron | 20.0% |
| !! | TTTATTCTACAAATTGAATC+AGG | - | chr8.4:17548911-17548930 | MS.gene071624:intron | 20.0% |
| !!! | ATGTAATTTTTTCATGAATG+AGG | - | chr8.4:17548056-17548075 | MS.gene071624:intron | 20.0% |
| !!! | TTTTAATTGAACACTGTAAA+AGG | - | chr8.4:17550152-17550171 | MS.gene071624:intron | 20.0% |
| ! | AAAATCTACCAAACATGTAT+TGG | + | chr8.4:17547888-17547907 | None:intergenic | 25.0% |
| ! | AATAAGTATTTACCATGAAC+TGG | + | chr8.4:17548617-17548636 | None:intergenic | 25.0% |
| ! | AATAGGCAAATTCTAATATG+GGG | + | chr8.4:17547260-17547279 | None:intergenic | 25.0% |
| ! | ACAAATTATCAGAACGTAAT+AGG | + | chr8.4:17547277-17547296 | None:intergenic | 25.0% |
| ! | ACAATTTGGAGATAAAAAGT+GGG | - | chr8.4:17550559-17550578 | MS.gene071624:CDS | 25.0% |
| ! | ATCAATTCAATGAATCACAT+TGG | + | chr8.4:17547682-17547701 | None:intergenic | 25.0% |
| ! | ATGAATTGATATTATTGCTC+AGG | - | chr8.4:17548428-17548447 | MS.gene071624:intron | 25.0% |
| ! | ATTTCAAAAGCAATTCAGTA+AGG | + | chr8.4:17548188-17548207 | None:intergenic | 25.0% |
| ! | ATTTGATGCTTTCAAATGAT+AGG | - | chr8.4:17549690-17549709 | MS.gene071624:intron | 25.0% |
| ! | GAGCAATAATATCAATTCAT+AGG | + | chr8.4:17548428-17548447 | None:intergenic | 25.0% |
| ! | GTAATAGGCAAATTCTAATA+TGG | + | chr8.4:17547262-17547281 | None:intergenic | 25.0% |
| ! | GTTTATGAACTGTAACATTT+AGG | - | chr8.4:17551062-17551081 | MS.gene071624:intron | 25.0% |
| ! | TAGTACTATAATGAAACTAC+TGG | + | chr8.4:17551007-17551026 | None:intergenic | 25.0% |
| ! | TATAATGAAACTACTGGATT+GGG | + | chr8.4:17551001-17551020 | None:intergenic | 25.0% |
| ! | TCATATTGAATATCACAGAA+TGG | - | chr8.4:17548766-17548785 | MS.gene071624:intron | 25.0% |
| ! | TGCAATGTAAAAGTTTACAT+AGG | + | chr8.4:17550519-17550538 | None:intergenic | 25.0% |
| ! | TTAAAACGAAGTTTAAGCAT+TGG | - | chr8.4:17549724-17549743 | MS.gene071624:intron | 25.0% |
| !! | AAATGTTTAGGTTTAGAAGA+TGG | - | chr8.4:17547746-17547765 | MS.gene071624:intron | 25.0% |
| !! | AATACATGTTTGGTAGATTT+TGG | - | chr8.4:17547887-17547906 | MS.gene071624:intron | 25.0% |
| !! | GGTGTAATTCTATATTTTTC+AGG | - | chr8.4:17550448-17550467 | MS.gene071624:intron | 25.0% |
| !! | GTAAACTTTTACATTGCAAA+TGG | - | chr8.4:17550521-17550540 | MS.gene071624:intron | 25.0% |
| !! | TAAAGGTCTAATCATTTTCA+CGG | + | chr8.4:17547177-17547196 | None:intergenic | 25.0% |
| !! | TTTTTCATATAATGAGTTGC+AGG | + | chr8.4:17550298-17550317 | None:intergenic | 25.0% |
| !!! | ACTGAATATTTGTTTTTGGT+TGG | - | chr8.4:17549852-17549871 | MS.gene071624:CDS | 25.0% |
| !!! | ACTTCGTTTTAACCAATATA+AGG | + | chr8.4:17549716-17549735 | None:intergenic | 25.0% |
| !!! | AGAAGTATGTTGTTTTATAC+AGG | - | chr8.4:17549248-17549267 | MS.gene071624:intron | 25.0% |
| !!! | AGAGACTGAATATTTGTTTT+TGG | - | chr8.4:17549848-17549867 | MS.gene071624:CDS | 25.0% |
| !!! | ATTTTAGAGTGAACAAAGTA+TGG | - | chr8.4:17548803-17548822 | MS.gene071624:intron | 25.0% |
| !!! | TAGTTGCATTTTTCAAGTAT+TGG | - | chr8.4:17549881-17549900 | MS.gene071624:intron | 25.0% |
| !!! | TATAATGTTTGTTGATTCCT+AGG | - | chr8.4:17551123-17551142 | MS.gene071624:CDS | 25.0% |
| !!! | TTCTATATTTTTCAGGATGA+TGG | - | chr8.4:17550455-17550474 | MS.gene071624:intron | 25.0% |
| !!! | TTCTTACAACTTTTTCTTTG+AGG | - | chr8.4:17548972-17548991 | MS.gene071624:intron | 25.0% |
| !!! | TTGTTTCTAATTATGTGCTT+TGG | - | chr8.4:17547293-17547312 | MS.gene071624:intron | 25.0% |
| AAAATACTCACTTCATGATG+AGG | + | chr8.4:17550620-17550639 | None:intergenic | 30.0% | |
| AAATACTCACTTCATGATGA+GGG | + | chr8.4:17550619-17550638 | None:intergenic | 30.0% | |
| AAGGATATCTAAGTTTCAAG+CGG | + | chr8.4:17548169-17548188 | None:intergenic | 30.0% | |
| ACAGAGACACTCTAATAAAT+GGG | - | chr8.4:17549167-17549186 | MS.gene071624:intron | 30.0% | |
| ATAAATGGGATACACGATTT+AGG | - | chr8.4:17549181-17549200 | MS.gene071624:intron | 30.0% | |
| ATCGCTTATTCATGATGATT+TGG | + | chr8.4:17550938-17550957 | None:intergenic | 30.0% | |
| ATCTGAGTAGTAAATGCAAT+AGG | + | chr8.4:17550097-17550116 | None:intergenic | 30.0% | |
| ATGTTATTAATACCCAGACT+TGG | + | chr8.4:17548869-17548888 | None:intergenic | 30.0% | |
| ATTATACATGACTGAGAAAG+AGG | - | chr8.4:17549462-17549481 | MS.gene071624:intron | 30.0% | |
| ATTGTAGAGATGCAATCATA+GGG | + | chr8.4:17549974-17549993 | None:intergenic | 30.0% | |
| CACAATTTGGAGATAAAAAG+TGG | - | chr8.4:17550558-17550577 | MS.gene071624:CDS | 30.0% | |
| CTATAATGAAACTACTGGAT+TGG | + | chr8.4:17551002-17551021 | None:intergenic | 30.0% | |
| GAGTTAATGCAGTGATTTAT+TGG | - | chr8.4:17547986-17548005 | MS.gene071624:intron | 30.0% | |
| GATATTACATCCTATCCTAT+TGG | + | chr8.4:17550048-17550067 | None:intergenic | 30.0% | |
| GATTATTATGTCTTGGTTGT+TGG | - | chr8.4:17547699-17547718 | MS.gene071624:intron | 30.0% | |
| TACAAATTGAATCAGGAAGT+TGG | - | chr8.4:17548918-17548937 | MS.gene071624:intron | 30.0% | |
| TACACAATATAAACCTCTAC+TGG | - | chr8.4:17550418-17550437 | MS.gene071624:intron | 30.0% | |
| TACATACCATATAATCCATG+AGG | + | chr8.4:17548372-17548391 | None:intergenic | 30.0% | |
| TATCCTATTGGAAACAAAAC+TGG | + | chr8.4:17550036-17550055 | None:intergenic | 30.0% | |
| TATTCATTCTTAACCATACC+AGG | + | chr8.4:17550355-17550374 | None:intergenic | 30.0% | |
| TATTGTAGAGATGCAATCAT+AGG | + | chr8.4:17549975-17549994 | None:intergenic | 30.0% | |
| TCAAGTATAACTGATGCTAA+TGG | - | chr8.4:17549400-17549419 | MS.gene071624:intron | 30.0% | |
| TCTAATAAATATCCCAGCTT+GGG | + | chr8.4:17549140-17549159 | None:intergenic | 30.0% | |
| TCTAATTATGTGCTTTGGTT+TGG | - | chr8.4:17547298-17547317 | MS.gene071624:intron | 30.0% | |
| TCTTTCTCAGTCATGTATAA+TGG | + | chr8.4:17549463-17549482 | None:intergenic | 30.0% | |
| TGAACTAATTGAGTAAGATC+TGG | + | chr8.4:17548749-17548768 | None:intergenic | 30.0% | |
| TGGATGTAGTGTTTCTTTAA+TGG | - | chr8.4:17549901-17549920 | MS.gene071624:intron | 30.0% | |
| TGTTAAAAAGAAGGTTAGGT+TGG | - | chr8.4:17547799-17547818 | MS.gene071624:intron | 30.0% | |
| TTGTTTAACAGTTTGTAGTG+AGG | - | chr8.4:17547513-17547532 | MS.gene071624:CDS | 30.0% | |
| ! | ACCTAACCTTCTTTTTAACA+AGG | + | chr8.4:17547799-17547818 | None:intergenic | 30.0% |
| ! | AGTTTTTCTGACCATTTTCA+GGG | - | chr8.4:17547432-17547451 | MS.gene071624:intron | 30.0% |
| ! | ATACACGATTTAGGTTCAAA+AGG | - | chr8.4:17549190-17549209 | MS.gene071624:intron | 30.0% |
| ! | TCAAATGATAGGCCTTATAT+TGG | - | chr8.4:17549701-17549720 | MS.gene071624:intron | 30.0% |
| ! | TTTTCATGAATGAGGATTAG+TGG | - | chr8.4:17548064-17548083 | MS.gene071624:intron | 30.0% |
| !! | ACTTTGTTCACTCTAAAATG+CGG | + | chr8.4:17548802-17548821 | None:intergenic | 30.0% |
| !! | AGTGTATCTTTGTTTCTGTA+TGG | - | chr8.4:17549611-17549630 | MS.gene071624:intron | 30.0% |
| !! | CACTTTTTATCTCCAAATTG+TGG | + | chr8.4:17550560-17550579 | None:intergenic | 30.0% |
| !! | CTTATTCATGATGATTTGGT+TGG | + | chr8.4:17550934-17550953 | None:intergenic | 30.0% |
| !! | TCTTGAACATTTTCAAGCAT+TGG | - | chr8.4:17547227-17547246 | MS.gene071624:intron | 30.0% |
| !! | TGATTTATAAGTATTGGGCT+GGG | + | chr8.4:17547072-17547091 | None:intergenic | 30.0% |
| !! | TTTGAAAGCATCAAATCATC+TGG | + | chr8.4:17549686-17549705 | None:intergenic | 30.0% |
| !!! | AGTTTTGTTTCCAATAGGAT+AGG | - | chr8.4:17550035-17550054 | MS.gene071624:intron | 30.0% |
| !!! | CATTGGTTTTATGTTGACTT+CGG | + | chr8.4:17548549-17548568 | None:intergenic | 30.0% |
| !!! | GTATCACTTTTGAGTTGTTT+TGG | - | chr8.4:17551084-17551103 | MS.gene071624:intron | 30.0% |
| !!! | TGGCTATTTTTGAGTTAAGA+TGG | + | chr8.4:17548849-17548868 | None:intergenic | 30.0% |
| AACATTGAAATCCGATGATG+CGG | - | chr8.4:17547541-17547560 | MS.gene071624:CDS | 35.0% | |
| AACTCAAAAATAGCCAAGTC+TGG | - | chr8.4:17548853-17548872 | MS.gene071624:intron | 35.0% | |
| AAGATGGATGTTACTGTGAT+TGG | - | chr8.4:17547762-17547781 | MS.gene071624:intron | 35.0% | |
| ACAGGAGATGATGATACAAA+TGG | - | chr8.4:17549266-17549285 | MS.gene071624:intron | 35.0% | |
| ACCATAGAATGGGAAAATCT+AGG | + | chr8.4:17547927-17547946 | None:intergenic | 35.0% | |
| ACTCAAAAATAGCCAAGTCT+GGG | - | chr8.4:17548854-17548873 | MS.gene071624:intron | 35.0% | |
| AGATACACTCTGATGGTAAT+AGG | + | chr8.4:17549600-17549619 | None:intergenic | 35.0% | |
| AGATTGATTGATACCTGGTA+TGG | - | chr8.4:17550339-17550358 | MS.gene071624:CDS | 35.0% | |
| AGTGGACAGCAAAAATTCTT+AGG | + | chr8.4:17549811-17549830 | None:intergenic | 35.0% | |
| AGTGTCTATTGAACAAGAAC+AGG | - | chr8.4:17548271-17548290 | MS.gene071624:intron | 35.0% | |
| ATTTCGTCTCTCAGAAGTAA+AGG | + | chr8.4:17547194-17547213 | None:intergenic | 35.0% | |
| CACAGAGACACTCTAATAAA+TGG | - | chr8.4:17549166-17549185 | MS.gene071624:intron | 35.0% | |
| CCAAATAGAGGATGAACTTA+AGG | - | chr8.4:17548314-17548333 | MS.gene071624:intron | 35.0% | |
| CCTTAAGTTCATCCTCTATT+TGG | + | chr8.4:17548317-17548336 | None:intergenic | 35.0% | |
| CGAAGTCAACATAAAACCAA+TGG | - | chr8.4:17548547-17548566 | MS.gene071624:intron | 35.0% | |
| CTTGTTCAATAGACACTCTT+CGG | + | chr8.4:17548268-17548287 | None:intergenic | 35.0% | |
| GAAACAAAGATACACTCTGA+TGG | + | chr8.4:17549607-17549626 | None:intergenic | 35.0% | |
| GATGAACTTAAGGCATATCT+TGG | - | chr8.4:17548324-17548343 | MS.gene071624:intron | 35.0% | |
| GTCTAATAAATATCCCAGCT+TGG | + | chr8.4:17549141-17549160 | None:intergenic | 35.0% | |
| TAATACATGTTCCTGAAGGA+AGG | + | chr8.4:17548242-17548261 | None:intergenic | 35.0% | |
| TAGCAAGATTGATTGATACC+TGG | - | chr8.4:17550334-17550353 | MS.gene071624:CDS | 35.0% | |
| TCAAAGAATTGCCCTGAAAA+TGG | + | chr8.4:17547446-17547465 | None:intergenic | 35.0% | |
| TCTTCAGATCTTTCATACTG+AGG | + | chr8.4:17549364-17549383 | None:intergenic | 35.0% | |
| TGACACTACCAATACATGTT+TGG | - | chr8.4:17547877-17547896 | MS.gene071624:intron | 35.0% | |
| TGACTGGACTTTCAATAGTT+GGG | - | chr8.4:17547583-17547602 | MS.gene071624:CDS | 35.0% | |
| TGATGTTTAATCACAAGAGC+TGG | + | chr8.4:17548024-17548043 | None:intergenic | 35.0% | |
| TGGCAAGAGAATAACTTATG+TGG | - | chr8.4:17548688-17548707 | MS.gene071624:CDS | 35.0% | |
| TGGTTAAATGGTAACCTCAA+AGG | - | chr8.4:17549937-17549956 | MS.gene071624:intron | 35.0% | |
| TGTTTCTTTAATGGAGTCTC+TGG | - | chr8.4:17549910-17549929 | MS.gene071624:intron | 35.0% | |
| TTAAGGCATATCTTGGAGTT+AGG | - | chr8.4:17548331-17548350 | MS.gene071624:intron | 35.0% | |
| TTATATAGCTGCATCTGCAA+TGG | + | chr8.4:17548582-17548601 | None:intergenic | 35.0% | |
| TTCATCTGAATCCTTCAAAG+TGG | + | chr8.4:17549829-17549848 | None:intergenic | 35.0% | |
| TTGACTGGACTTTCAATAGT+TGG | - | chr8.4:17547582-17547601 | MS.gene071624:CDS | 35.0% | |
| TTGGAGTTAGGAAGGTTATA+TGG | - | chr8.4:17548343-17548362 | MS.gene071624:intron | 35.0% | |
| TTTCCAAGTGATGAAGTTTG+TGG | - | chr8.4:17550794-17550813 | MS.gene071624:intron | 35.0% | |
| TTTGAGTAAGAGCCAAATAG+AGG | - | chr8.4:17548302-17548321 | MS.gene071624:intron | 35.0% | |
| ! | AAACACAAGTTGAGCATGAA+CGG | + | chr8.4:17546943-17546962 | None:intergenic | 35.0% |
| ! | AATGAGGATTAGTGGCAATT+AGG | - | chr8.4:17548072-17548091 | MS.gene071624:intron | 35.0% |
| ! | AGTTTAAGATGTCATGTTCG+CGG | - | chr8.4:17549645-17549664 | MS.gene071624:intron | 35.0% |
| ! | ATTTATTCACGTTCTAGCTG+TGG | - | chr8.4:17547837-17547856 | MS.gene071624:intron | 35.0% |
| ! | CATTTATTAGAGTGTCTCTG+TGG | + | chr8.4:17549168-17549187 | None:intergenic | 35.0% |
| ! | GAGTTTTTCTGACCATTTTC+AGG | - | chr8.4:17547431-17547450 | MS.gene071624:intron | 35.0% |
| ! | GCCTTGTTAAAAAGAAGGTT+AGG | - | chr8.4:17547795-17547814 | MS.gene071624:intron | 35.0% |
| ! | GGTCTATATAGTTTTCCATG+TGG | + | chr8.4:17549790-17549809 | None:intergenic | 35.0% |
| ! | TAGCAATTTTTCCTTCCTTC+AGG | - | chr8.4:17548228-17548247 | MS.gene071624:intron | 35.0% |
| ! | TCCTAGATTTTCCCATTCTA+TGG | - | chr8.4:17547923-17547942 | MS.gene071624:intron | 35.0% |
| !! | ATTTGGCTCTTACTCAAATG+TGG | + | chr8.4:17548300-17548319 | None:intergenic | 35.0% |
| !! | ATTTTTGCTGTCCACTTTGA+AGG | - | chr8.4:17549815-17549834 | MS.gene071624:CDS | 35.0% |
| !! | CTGATTTATAAGTATTGGGC+TGG | + | chr8.4:17547073-17547092 | None:intergenic | 35.0% |
| !! | GTTCGGTTCATGATTTTAGT+GGG | - | chr8.4:17547320-17547339 | MS.gene071624:intron | 35.0% |
| !! | TTATGTGCTTTGGTTTGGTT+CGG | - | chr8.4:17547303-17547322 | MS.gene071624:intron | 35.0% |
| !! | TTTGGCTCTTACTCAAATGT+GGG | + | chr8.4:17548299-17548318 | None:intergenic | 35.0% |
| !! | TTTGTTGATTCCTAGGTTGT+GGG | - | chr8.4:17551130-17551149 | MS.gene071624:CDS | 35.0% |
| !!! | AAGCCAGTTTTGTTTCCAAT+AGG | - | chr8.4:17550030-17550049 | MS.gene071624:intron | 35.0% |
| !!! | ATAACATGTGCTGTTTTGTG+AGG | - | chr8.4:17549297-17549316 | MS.gene071624:intron | 35.0% |
| AAGGTTATATGGTTGCCTCA+TGG | - | chr8.4:17548354-17548373 | MS.gene071624:intron | 40.0% | |
| AAGTTATTCTCTTGCCAGAG+TGG | + | chr8.4:17548685-17548704 | None:intergenic | 40.0% | |
| ATGGTCAGAAAAACTCACAG+TGG | + | chr8.4:17547427-17547446 | None:intergenic | 40.0% | |
| ATTCAAAGAAGTTCCCAAGC+TGG | - | chr8.4:17549124-17549143 | MS.gene071624:intron | 40.0% | |
| CAAATTCTAATATGGGGCCA+TGG | + | chr8.4:17547254-17547273 | None:intergenic | 40.0% | |
| CACTAACTACTGCAGTTATG+TGG | - | chr8.4:17550743-17550762 | MS.gene071624:CDS | 40.0% | |
| CCTGAAGACAAAAGAGTAGA+CGG | + | chr8.4:17548132-17548151 | None:intergenic | 40.0% | |
| CGAAACACATATCATTGGAC+GGG | - | chr8.4:17549761-17549780 | MS.gene071624:CDS | 40.0% | |
| GACTGGACTTTCAATAGTTG+GGG | - | chr8.4:17547584-17547603 | MS.gene071624:CDS | 40.0% | |
| GATATTGGGCATGCAATCTT+TGG | - | chr8.4:17550193-17550212 | MS.gene071624:CDS | 40.0% | |
| GATTCAACACAAGAACAGAC+AGG | + | chr8.4:17548663-17548682 | None:intergenic | 40.0% | |
| GATTCTTGGTTTCGTGACAT+TGG | - | chr8.4:17547399-17547418 | MS.gene071624:intron | 40.0% | |
| GCAATGGTTCATTACTCCAT+TGG | + | chr8.4:17548566-17548585 | None:intergenic | 40.0% | |
| GCGAAACACATATCATTGGA+CGG | - | chr8.4:17549760-17549779 | MS.gene071624:CDS | 40.0% | |
| GCTATCACCATGTACTTATG+AGG | - | chr8.4:17548721-17548740 | MS.gene071624:CDS | 40.0% | |
| GCTATCATTGCTCCACAATT+TGG | - | chr8.4:17550545-17550564 | MS.gene071624:CDS | 40.0% | |
| GGAAGGTCTTAGACAGAATT+CGG | + | chr8.4:17550598-17550617 | None:intergenic | 40.0% | |
| GTGGTAATACATGTTCCTGA+AGG | + | chr8.4:17548246-17548265 | None:intergenic | 40.0% | |
| TAAACCTCTACTGGATGTTC+TGG | - | chr8.4:17550427-17550446 | MS.gene071624:intron | 40.0% | |
| TAGTTTGAGCCACAGATCTT+CGG | + | chr8.4:17550820-17550839 | None:intergenic | 40.0% | |
| TCAACGACTCTAACATGATC+CGG | + | chr8.4:17547366-17547385 | None:intergenic | 40.0% | |
| TGCAGGATAGTCTCATCATT+AGG | + | chr8.4:17550281-17550300 | None:intergenic | 40.0% | |
| TGGGAACTTCTTTGAATGTG+TGG | + | chr8.4:17549121-17549140 | None:intergenic | 40.0% | |
| TGGTCAGAAAAACTCACAGT+GGG | + | chr8.4:17547426-17547445 | None:intergenic | 40.0% | |
| TGTCGCGAAACACATATCAT+TGG | - | chr8.4:17549756-17549775 | MS.gene071624:CDS | 40.0% | |
| TTCAAAGAAGTTCCCAAGCT+GGG | - | chr8.4:17549125-17549144 | MS.gene071624:intron | 40.0% | |
| TTCTTGTGTTGAATCCACTC+TGG | - | chr8.4:17548668-17548687 | MS.gene071624:CDS | 40.0% | |
| ! | AGATTAGCTCCAACGATTCT+TGG | - | chr8.4:17547385-17547404 | MS.gene071624:intron | 40.0% |
| ! | ATCATTTTCACGGTTGAGAC+AGG | + | chr8.4:17547167-17547186 | None:intergenic | 40.0% |
| ! | GATTTGGTTGGATGAGAACA+TGG | + | chr8.4:17550922-17550941 | None:intergenic | 40.0% |
| ! | GGTAGATTTTGGATGTTGAG+AGG | - | chr8.4:17547898-17547917 | MS.gene071624:intron | 40.0% |
| ! | TCTGGAACCTCATAAGTACA+TGG | + | chr8.4:17548731-17548750 | None:intergenic | 40.0% |
| ! | TGGTTGCCTCATGGATTATA+TGG | - | chr8.4:17548363-17548382 | MS.gene071624:intron | 40.0% |
| !! | CGACAGCCTTGTTAAAAAGA+AGG | - | chr8.4:17547790-17547809 | MS.gene071624:intron | 40.0% |
| !! | CTCAGTCATGTATAATGGAC+CGG | + | chr8.4:17549458-17549477 | None:intergenic | 40.0% |
| !! | GGTTCGGTTCATGATTTTAG+TGG | - | chr8.4:17547319-17547338 | MS.gene071624:intron | 40.0% |
| !! | GTTTGTTGATTCCTAGGTTG+TGG | - | chr8.4:17551129-17551148 | MS.gene071624:CDS | 40.0% |
| !! | TCAGTCATGTATAATGGACC+GGG | + | chr8.4:17549457-17549476 | None:intergenic | 40.0% |
| !! | TTGAATCAGGAAGTTGGTAG+TGG | - | chr8.4:17548924-17548943 | MS.gene071624:intron | 40.0% |
| !!! | CATTTTCAAGCATTGGTCCA+TGG | - | chr8.4:17547234-17547253 | MS.gene071624:intron | 40.0% |
| AATCCTATGCTCCGCATCAT+CGG | + | chr8.4:17547555-17547574 | None:intergenic | 45.0% | |
| ACCTGACAAAACAATCTCCC+TGG | + | chr8.4:17551167-17551186 | None:intergenic | 45.0% | |
| ACCTTCAATTCCCACAACCT+AGG | + | chr8.4:17551143-17551162 | None:intergenic | 45.0% | |
| ACTCACTTCATGATGAGGGA+AGG | + | chr8.4:17550615-17550634 | None:intergenic | 45.0% | |
| AGCATCCATGTAGATGGAGA+AGG | - | chr8.4:17547960-17547979 | MS.gene071624:intron | 45.0% | |
| ATAGGATTGCGGGAATTGAC+TGG | - | chr8.4:17547567-17547586 | MS.gene071624:CDS | 45.0% | |
| CAAGTTGCTCAACCAGTTCA+TGG | - | chr8.4:17548602-17548621 | MS.gene071624:intron | 45.0% | |
| CATTCTATGGTGCTTGAAGG+CGG | - | chr8.4:17547936-17547955 | MS.gene071624:intron | 45.0% | |
| CTGAGCTGAACTAGCACAAA+CGG | + | chr8.4:17547006-17547025 | None:intergenic | 45.0% | |
| GAATGCTGGTAGTTAGCAGT+CGG | - | chr8.4:17550215-17550234 | MS.gene071624:CDS | 45.0% | |
| GCAATCATAGGGTTACCACT+GGG | + | chr8.4:17549963-17549982 | None:intergenic | 45.0% | |
| GCCTTCAAGCACCATAGAAT+GGG | + | chr8.4:17547937-17547956 | None:intergenic | 45.0% | |
| GCTGAGAGCAAAACAATGAG+AGG | + | chr8.4:17550129-17550148 | None:intergenic | 45.0% | |
| GGCATATCTTGGAGTTAGGA+AGG | - | chr8.4:17548335-17548354 | MS.gene071624:intron | 45.0% | |
| GTCACGAAACCAAGAATCGT+TGG | + | chr8.4:17547397-17547416 | None:intergenic | 45.0% | |
| GTCTCTGGTGTCTGGTTAAA+TGG | - | chr8.4:17549925-17549944 | MS.gene071624:intron | 45.0% | |
| GTGATCAAACTCCATGTTCC+CGG | - | chr8.4:17549436-17549455 | MS.gene071624:intron | 45.0% | |
| GTTCAATAGACACTCTTCGG+TGG | + | chr8.4:17548265-17548284 | None:intergenic | 45.0% | |
| TACACCAGAACATCCAGTAG+AGG | + | chr8.4:17550434-17550453 | None:intergenic | 45.0% | |
| TCAACTTGTGTTTGCCAGAG+TGG | - | chr8.4:17546950-17546969 | MS.gene071624:CDS | 45.0% | |
| TCCCATTCTATGGTGCTTGA+AGG | - | chr8.4:17547933-17547952 | MS.gene071624:intron | 45.0% | |
| TCCTAGGTTGTGGGAATTGA+AGG | - | chr8.4:17551139-17551158 | MS.gene071624:CDS | 45.0% | |
| TCTCACCTTCTCCATCTACA+TGG | + | chr8.4:17547968-17547987 | None:intergenic | 45.0% | |
| TGCAATCATAGGGTTACCAC+TGG | + | chr8.4:17549964-17549983 | None:intergenic | 45.0% | |
| TGGACTTTCAATAGTTGGGG+AGG | - | chr8.4:17547587-17547606 | MS.gene071624:CDS | 45.0% | |
| TGTGGGAATTGAAGGTTCCA+GGG | - | chr8.4:17551147-17551166 | MS.gene071624:CDS | 45.0% | |
| TTAATGGAGTCTCTGGTGTC+TGG | - | chr8.4:17549917-17549936 | MS.gene071624:intron | 45.0% | |
| TTGGGACATTTGCGAGTTTG+TGG | + | chr8.4:17550983-17551002 | None:intergenic | 45.0% | |
| TTGTGGGAATTGAAGGTTCC+AGG | - | chr8.4:17551146-17551165 | MS.gene071624:CDS | 45.0% | |
| ! | CCGTCTACTCTTTTGTCTTC+AGG | - | chr8.4:17548129-17548148 | MS.gene071624:intron | 45.0% |
| ! | GTTCGCGGTTTTCTTTTCTG+TGG | - | chr8.4:17549660-17549679 | MS.gene071624:intron | 45.0% |
| !! | AGGGAGATTGTTTTGTCAGG+TGG | - | chr8.4:17551166-17551185 | MS.gene071624:CDS | 45.0% |
| !! | GATTTTAGTGGGAGAATGCC+CGG | - | chr8.4:17547331-17547350 | MS.gene071624:intron | 45.0% |
| !! | GCATGCAATCTTTGGAATGC+TGG | - | chr8.4:17550201-17550220 | MS.gene071624:CDS | 45.0% |
| !! | TCCAGGGAGATTGTTTTGTC+AGG | - | chr8.4:17551163-17551182 | MS.gene071624:CDS | 45.0% |
| !! | TGTATAATGGACCGGGAACA+TGG | + | chr8.4:17549450-17549469 | None:intergenic | 45.0% |
| !!! | TTATAGATTTTTTTTTTTTT+GGG | - | chr8.4:17548496-17548515 | MS.gene071624:intron | 5.0% |
| !!! | TTTAATTTTAATTATAAAGT+CGG | + | chr8.4:17547144-17547163 | None:intergenic | 5.0% |
| !!! | TTTATAGATTTTTTTTTTTT+TGG | - | chr8.4:17548495-17548514 | MS.gene071624:intron | 5.0% |
| AATCCGATGATGCGGAGCAT+AGG | - | chr8.4:17547549-17547568 | MS.gene071624:CDS | 50.0% | |
| ACTTGTGTTTGCCAGAGTGG+CGG | - | chr8.4:17546953-17546972 | MS.gene071624:CDS | 50.0% | |
| AGTCTAGTACCAGGAAGCCT+TGG | + | chr8.4:17550488-17550507 | None:intergenic | 50.0% | |
| AGTTTGTGGCCGAAGATCTG+TGG | - | chr8.4:17550808-17550827 | MS.gene071624:intron | 50.0% | |
| ATGACTGAGAAAGAGGCTGC+TGG | - | chr8.4:17549469-17549488 | MS.gene071624:intron | 50.0% | |
| CCAAGACAGAAGAACCACAC+AGG | + | chr8.4:17549323-17549342 | None:intergenic | 50.0% | |
| CCTGTGTGGTTCTTCTGTCT+TGG | - | chr8.4:17549320-17549339 | MS.gene071624:intron | 50.0% | |
| CGCCTTCAAGCACCATAGAA+TGG | + | chr8.4:17547938-17547957 | None:intergenic | 50.0% | |
| CGGCCACAAACTTCATCACT+TGG | + | chr8.4:17550800-17550819 | None:intergenic | 50.0% | |
| CGTTTGTGCTAGTTCAGCTC+AGG | - | chr8.4:17547004-17547023 | MS.gene071624:intron | 50.0% | |
| GAAGCAGCAAGTCTAGTACC+AGG | + | chr8.4:17550497-17550516 | None:intergenic | 50.0% | |
| TCATTGGACGGGATACCACA+TGG | - | chr8.4:17549772-17549791 | MS.gene071624:CDS | 50.0% | |
| TGACTGAGAAAGAGGCTGCT+GGG | - | chr8.4:17549470-17549489 | MS.gene071624:intron | 50.0% | |
| TGATGCGGAGCATAGGATTG+CGG | - | chr8.4:17547556-17547575 | MS.gene071624:CDS | 50.0% | |
| TGTGCTAGTTCAGCTCAGGT+TGG | - | chr8.4:17547008-17547027 | MS.gene071624:intron | 50.0% | |
| ! | ATGATCCGGTAGCTGATTCC+GGG | + | chr8.4:17547352-17547371 | None:intergenic | 50.0% |
| ! | CATGATCCGGTAGCTGATTC+CGG | + | chr8.4:17547353-17547372 | None:intergenic | 50.0% |
| AGTACCAGGAAGCCTTGGCT+TGG | + | chr8.4:17550483-17550502 | None:intergenic | 55.0% | |
| GAATGCCCGGAATCAGCTAC+CGG | - | chr8.4:17547344-17547363 | MS.gene071624:intron | 55.0% | |
| GACTGAGAAAGAGGCTGCTG+GGG | - | chr8.4:17549471-17549490 | MS.gene071624:intron | 55.0% | |
| GATGCGGAGCATAGGATTGC+GGG | - | chr8.4:17547557-17547576 | MS.gene071624:CDS | 55.0% | |
| GGCACCGTCACGCCAATTAT+CGG | + | chr8.4:17546922-17546941 | None:intergenic | 55.0% | |
| TGGTAACCTCAAAGGCCCAG+TGG | - | chr8.4:17549945-17549964 | MS.gene071624:intron | 55.0% | |
| ! | AGAGGCTGCTGGGGTTTTTC+AGG | - | chr8.4:17549480-17549499 | MS.gene071624:intron | 55.0% |
| !! | AGGATGATGGAGCCAAGCCA+AGG | - | chr8.4:17550468-17550487 | MS.gene071624:intron | 55.0% |
| !! | GCTGTTTTGTGAGGCCTGTG+TGG | - | chr8.4:17549306-17549325 | MS.gene071624:intron | 55.0% |
| !! | GGCGGAAGCATCCATGTAGA+TGG | - | chr8.4:17547954-17547973 | MS.gene071624:intron | 55.0% |
| AGAGATTGCAGCCGCCACTC+TGG | + | chr8.4:17546967-17546986 | None:intergenic | 60.0% | |
| GGGTTACCACTGGGCCTTTG+AGG | + | chr8.4:17549954-17549973 | None:intergenic | 60.0% | |
| ! | CGCGCCGATAATTGGCGTGA+CGG | - | chr8.4:17546915-17546934 | MS.gene071624:CDS | 60.0% |
| GGAGCCAAGCCAAGGCTTCC+TGG | - | chr8.4:17550476-17550495 | MS.gene071624:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 17546912 | 17551228 | 17546912 | ID=MS.gene071624 |
| chr8.4 | mRNA | 17546912 | 17551228 | 17546912 | ID=MS.gene071624.t1;Parent=MS.gene071624 |
| chr8.4 | exon | 17551115 | 17551228 | 17551115 | ID=MS.gene071624.t1.exon1;Parent=MS.gene071624.t1 |
| chr8.4 | CDS | 17551115 | 17551228 | 17551115 | ID=cds.MS.gene071624.t1;Parent=MS.gene071624.t1 |
| chr8.4 | exon | 17550712 | 17550801 | 17550712 | ID=MS.gene071624.t1.exon2;Parent=MS.gene071624.t1 |
| chr8.4 | CDS | 17550712 | 17550801 | 17550712 | ID=cds.MS.gene071624.t1;Parent=MS.gene071624.t1 |
| chr8.4 | exon | 17550532 | 17550616 | 17550532 | ID=MS.gene071624.t1.exon3;Parent=MS.gene071624.t1 |
| chr8.4 | CDS | 17550532 | 17550616 | 17550532 | ID=cds.MS.gene071624.t1;Parent=MS.gene071624.t1 |
| chr8.4 | exon | 17550329 | 17550384 | 17550329 | ID=MS.gene071624.t1.exon4;Parent=MS.gene071624.t1 |
| chr8.4 | CDS | 17550329 | 17550384 | 17550329 | ID=cds.MS.gene071624.t1;Parent=MS.gene071624.t1 |
| chr8.4 | exon | 17550159 | 17550237 | 17550159 | ID=MS.gene071624.t1.exon5;Parent=MS.gene071624.t1 |
| chr8.4 | CDS | 17550159 | 17550237 | 17550159 | ID=cds.MS.gene071624.t1;Parent=MS.gene071624.t1 |
| chr8.4 | exon | 17549756 | 17549890 | 17549756 | ID=MS.gene071624.t1.exon6;Parent=MS.gene071624.t1 |
| chr8.4 | CDS | 17549756 | 17549890 | 17549756 | ID=cds.MS.gene071624.t1;Parent=MS.gene071624.t1 |
| chr8.4 | exon | 17548818 | 17548870 | 17548818 | ID=MS.gene071624.t1.exon7;Parent=MS.gene071624.t1 |
| chr8.4 | CDS | 17548818 | 17548870 | 17548818 | ID=cds.MS.gene071624.t1;Parent=MS.gene071624.t1 |
| chr8.4 | exon | 17548639 | 17548773 | 17548639 | ID=MS.gene071624.t1.exon8;Parent=MS.gene071624.t1 |
| chr8.4 | CDS | 17548639 | 17548773 | 17548639 | ID=cds.MS.gene071624.t1;Parent=MS.gene071624.t1 |
| chr8.4 | exon | 17547512 | 17547670 | 17547512 | ID=MS.gene071624.t1.exon9;Parent=MS.gene071624.t1 |
| chr8.4 | CDS | 17547512 | 17547670 | 17547512 | ID=cds.MS.gene071624.t1;Parent=MS.gene071624.t1 |
| chr8.4 | exon | 17546912 | 17546995 | 17546912 | ID=MS.gene071624.t1.exon10;Parent=MS.gene071624.t1 |
| chr8.4 | CDS | 17546912 | 17546995 | 17546912 | ID=cds.MS.gene071624.t1;Parent=MS.gene071624.t1 |
| Gene Sequence |
| Protein sequence |
