Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05930.t1 | AET05293.2 | 98.9 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 6.40E-206 | 726.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05930.t1 | Q54UF8 | 27.1 | 339 | 218 | 8 | 35 | 347 | 23 | 358 | 1.9e-28 | 128.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05930.t1 | G7L8Z3 | 98.9 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 4.6e-206 | 726.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049133 | MS.gene05930 | 0.85669 | 2.71E-62 | -1.69E-46 |
| MS.gene05930 | MS.gene061841 | 0.812297 | 4.55E-51 | -1.69E-46 |
| MS.gene05930 | MS.gene06793 | 0.803849 | 2.86E-49 | -1.69E-46 |
| MS.gene05930 | MS.gene20768 | 0.80549 | 1.30E-49 | -1.69E-46 |
| MS.gene05930 | MS.gene26665 | 0.805459 | 1.32E-49 | -1.69E-46 |
| MS.gene05930 | MS.gene27274 | 0.816864 | 4.44E-52 | -1.69E-46 |
| MS.gene05930 | MS.gene74270 | 0.815095 | 1.10E-51 | -1.69E-46 |
| MS.gene05930 | MS.gene74272 | 0.816945 | 4.26E-52 | -1.69E-46 |
| MS.gene05930 | MS.gene78065 | 0.807563 | 4.75E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05930 | MS.gene01839 | PPI |
| MS.gene049133 | MS.gene05930 | PPI |
| MS.gene05930 | MS.gene00892 | PPI |
| MS.gene05930 | MS.gene04773 | PPI |
| MS.gene05930 | MS.gene015739 | PPI |
| MS.gene05930 | MS.gene064960 | PPI |
| MS.gene05930 | MS.gene049133 | PPI |
| MS.gene94998 | MS.gene05930 | PPI |
| MS.gene53603 | MS.gene05930 | PPI |
| MS.gene05930 | MS.gene047905 | PPI |
| MS.gene05930 | MS.gene64275 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05930.t1 | MTR_8g103740 | 98.883 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 0.0 | 731 |
| MS.gene05930.t1 | MTR_6g086060 | 73.278 | 363 | 92 | 3 | 1 | 358 | 1 | 363 | 0.0 | 544 |
| MS.gene05930.t1 | MTR_8g103740 | 98.864 | 264 | 3 | 0 | 95 | 358 | 1 | 264 | 0.0 | 536 |
| MS.gene05930.t1 | MTR_8g103740 | 98.844 | 173 | 2 | 0 | 186 | 358 | 1 | 173 | 2.99e-122 | 352 |
| MS.gene05930.t1 | MTR_1g046480 | 51.682 | 327 | 155 | 3 | 34 | 358 | 51 | 376 | 3.91e-116 | 344 |
| MS.gene05930.t1 | MTR_2g022060 | 28.402 | 338 | 219 | 4 | 34 | 349 | 28 | 364 | 2.67e-46 | 163 |
| MS.gene05930.t1 | MTR_7g057720 | 30.994 | 342 | 203 | 9 | 34 | 349 | 31 | 365 | 2.35e-38 | 142 |
| MS.gene05930.t1 | MTR_7g057720 | 28.933 | 356 | 209 | 9 | 34 | 349 | 31 | 382 | 1.48e-36 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05930.t1 | AT3G24460 | 69.106 | 369 | 102 | 3 | 1 | 358 | 1 | 368 | 0.0 | 541 |
| MS.gene05930.t1 | AT3G24460 | 69.106 | 369 | 102 | 3 | 1 | 358 | 1 | 368 | 0.0 | 541 |
| MS.gene05930.t1 | AT4G13345 | 71.944 | 360 | 96 | 2 | 1 | 358 | 1 | 357 | 0.0 | 529 |
| MS.gene05930.t1 | AT4G13345 | 71.944 | 360 | 96 | 2 | 1 | 358 | 1 | 357 | 0.0 | 529 |
| MS.gene05930.t1 | AT4G13345 | 71.389 | 360 | 98 | 2 | 1 | 358 | 1 | 357 | 0.0 | 526 |
| MS.gene05930.t1 | AT4G13345 | 71.389 | 360 | 98 | 2 | 1 | 358 | 1 | 357 | 0.0 | 526 |
| MS.gene05930.t1 | AT4G13345 | 71.709 | 357 | 96 | 2 | 1 | 355 | 1 | 354 | 0.0 | 525 |
| MS.gene05930.t1 | AT4G13345 | 67.219 | 302 | 94 | 2 | 1 | 300 | 1 | 299 | 1.19e-141 | 404 |
| MS.gene05930.t1 | AT4G13345 | 67.219 | 302 | 94 | 2 | 1 | 300 | 1 | 299 | 1.19e-141 | 404 |
| MS.gene05930.t1 | AT2G33205 | 48.555 | 346 | 173 | 4 | 15 | 358 | 32 | 374 | 3.72e-110 | 329 |
| MS.gene05930.t1 | AT2G33205 | 48.276 | 348 | 173 | 5 | 15 | 358 | 32 | 376 | 1.04e-108 | 324 |
| MS.gene05930.t1 | AT2G33205 | 48.406 | 345 | 171 | 5 | 15 | 355 | 32 | 373 | 1.22e-108 | 323 |
| MS.gene05930.t1 | AT2G33205 | 48.276 | 348 | 173 | 5 | 15 | 358 | 32 | 376 | 2.91e-108 | 324 |
| MS.gene05930.t1 | AT2G33205 | 48.276 | 348 | 173 | 5 | 15 | 358 | 32 | 376 | 2.91e-108 | 324 |
| MS.gene05930.t1 | AT2G33205 | 48.921 | 278 | 138 | 3 | 84 | 358 | 5 | 281 | 1.35e-88 | 270 |
| MS.gene05930.t1 | AT2G33205 | 49.438 | 267 | 131 | 3 | 95 | 358 | 1 | 266 | 4.17e-86 | 263 |
| MS.gene05930.t1 | AT2G33205 | 46.309 | 298 | 155 | 4 | 15 | 310 | 32 | 326 | 3.48e-84 | 259 |
| MS.gene05930.t1 | AT2G33205 | 46.309 | 298 | 155 | 4 | 15 | 310 | 32 | 326 | 3.48e-84 | 259 |
| MS.gene05930.t1 | AT3G06170 | 27.089 | 347 | 230 | 5 | 34 | 358 | 29 | 374 | 1.87e-38 | 142 |
| MS.gene05930.t1 | AT1G16180 | 29.769 | 346 | 204 | 9 | 34 | 349 | 31 | 367 | 6.75e-34 | 130 |
| MS.gene05930.t1 | AT1G16180 | 29.769 | 346 | 204 | 9 | 34 | 349 | 31 | 367 | 6.75e-34 | 130 |
Find 81 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGGCTTTATTCAAATTTA+TGG | 0.115224 | 4.4:-2860316 | MS.gene05930:intron |
| CCAGGGGAGGTGGCGCATTT+TGG | 0.174364 | 4.4:-2860183 | MS.gene05930:intron |
| GATGCTTAGCCAGTCTGTTT+TGG | 0.263287 | 4.4:+2858964 | None:intergenic |
| ATTCAACCTACAGGATTAAA+AGG | 0.275412 | 4.4:-2860728 | MS.gene05930:intron |
| TTTATATTGTCTTCCTTTGT+TGG | 0.276198 | 4.4:-2859166 | MS.gene05930:CDS |
| CAATGGTGGAAAAGACTGTT+TGG | 0.350902 | 4.4:-2860702 | MS.gene05930:CDS |
| TCCAAGGATTGGATGCATTT+CGG | 0.359677 | 4.4:+2861042 | None:intergenic |
| CAAACAACATCACATGAATA+TGG | 0.364727 | 4.4:+2859468 | None:intergenic |
| GACCGCATATGTCGTCTGTT+TGG | 0.370819 | 4.4:-2859441 | MS.gene05930:CDS |
| TCATATCCAATGATTCTTCA+TGG | 0.371838 | 4.4:-2861076 | MS.gene05930:CDS |
| CATAGATTCCAAATGCTTCC+AGG | 0.376091 | 4.4:-2858551 | MS.gene05930:intron |
| TTATGCTAATTAGTTGGATT+AGG | 0.382452 | 4.4:+2860031 | None:intergenic |
| GTTGAAGAAGATATGGAAAC+TGG | 0.390734 | 4.4:-2861128 | None:intergenic |
| ATGTGGGGTGGACCAGCACC+TGG | 0.391123 | 4.4:-2857898 | MS.gene05930:CDS |
| TATGCTAACCTGGAAGCATT+TGG | 0.394190 | 4.4:+2858543 | None:intergenic |
| GATGATGTACCATATGGTTA+TGG | 0.398590 | 4.4:-2858428 | MS.gene05930:CDS |
| AGCTGATTATGCTAATTAGT+TGG | 0.402425 | 4.4:+2860025 | None:intergenic |
| TGCTGGCTAATCTGTTGGCA+TGG | 0.404877 | 4.4:-2860989 | MS.gene05930:CDS |
| GCATGGGCTGCTCGTGACTA+TGG | 0.408101 | 4.4:-2860972 | MS.gene05930:CDS |
| ATTCTAACTCCAGGGCTGAT+GGG | 0.414558 | 4.4:-2859191 | MS.gene05930:CDS |
| CTGCTGGTGTATCATCCTTC+CGG | 0.415225 | 4.4:+2858453 | None:intergenic |
| TCGTAGTGCTTTAACAGAAA+TGG | 0.420048 | 4.4:-2860949 | MS.gene05930:CDS |
| TACTATTCTGACCCAGGTGC+TGG | 0.425466 | 4.4:+2857886 | None:intergenic |
| AATGGTGGAAAAGACTGTTT+GGG | 0.428647 | 4.4:-2860701 | MS.gene05930:CDS |
| TATTCTAACTCCAGGGCTGA+TGG | 0.432842 | 4.4:-2859192 | MS.gene05930:CDS |
| TTGGCAAACCTGCCTTCTAA+TGG | 0.434037 | 4.4:+2859139 | None:intergenic |
| TCCGAAATGCATCCAATCCT+TGG | 0.436210 | 4.4:-2861043 | MS.gene05930:CDS |
| ACTGAACCATGAAGAATCAT+TGG | 0.442403 | 4.4:+2861070 | None:intergenic |
| CTGCTGGAGAAAACTGCATC+AGG | 0.444077 | 4.4:-2859003 | MS.gene05930:CDS |
| TTTGTTGGTGCGCCATTAGA+AGG | 0.456775 | 4.4:-2859151 | MS.gene05930:intron |
| TGCTAATTAGTTGGATTAGG+AGG | 0.469122 | 4.4:+2860034 | None:intergenic |
| TTCTAACTCCAGGGCTGATG+GGG | 0.479038 | 4.4:-2859190 | MS.gene05930:CDS |
| GCATATGTCGTCTGTTTGGT+GGG | 0.483780 | 4.4:-2859437 | MS.gene05930:CDS |
| ACCATAAATTTGAATAAAGC+CGG | 0.484335 | 4.4:+2860315 | None:intergenic |
| CGCATATGTCGTCTGTTTGG+TGG | 0.485949 | 4.4:-2859438 | MS.gene05930:CDS |
| TATCTGCAATAGGTTAATGC+TGG | 0.506107 | 4.4:-2859215 | MS.gene05930:intron |
| GCTGGCTAATCTGTTGGCAT+GGG | 0.507922 | 4.4:-2860988 | MS.gene05930:CDS |
| TTGCTATGCTATTGGTTGGA+TGG | 0.512496 | 4.4:-2858367 | MS.gene05930:CDS |
| ATATAAAGCCCCATCAGCCC+TGG | 0.514306 | 4.4:+2859182 | None:intergenic |
| TTGAGAAGGCAAGAAGGCTC+TGG | 0.515041 | 4.4:+2859386 | None:intergenic |
| TTCTAATGGCGCACCAACAA+AGG | 0.520794 | 4.4:+2859153 | None:intergenic |
| GCAGAGGATGATGTACCATA+TGG | 0.526809 | 4.4:-2858434 | MS.gene05930:CDS |
| GGTTAGTCAAGATTGCTTTG+TGG | 0.532718 | 4.4:-2860372 | MS.gene05930:CDS |
| AATGCTGGTATTCTAACTCC+AGG | 0.540072 | 4.4:-2859200 | MS.gene05930:CDS |
| AAGAGAAACACATGGCACTC+TGG | 0.544859 | 4.4:-2860400 | MS.gene05930:CDS |
| ATATCTTGCCATCCAAGGAT+TGG | 0.547635 | 4.4:+2861031 | None:intergenic |
| TTCATTTACTATTCTGACCC+AGG | 0.547987 | 4.4:+2857880 | None:intergenic |
| TTTGTATGCAGTGAACCTGC+TGG | 0.553034 | 4.4:-2859019 | MS.gene05930:intron |
| GAGACACGCTGGTCATGAGT+TGG | 0.556515 | 4.4:+2859330 | None:intergenic |
| TATGGTACATCATCCTCTGC+TGG | 0.564240 | 4.4:+2858437 | None:intergenic |
| TAAGCATATCTTGCCATCCA+AGG | 0.572921 | 4.4:+2861026 | None:intergenic |
| TAATGAAGAAAATGTTGAGA+AGG | 0.573025 | 4.4:+2859372 | None:intergenic |
| AAATGCATCCAATCCTTGGA+TGG | 0.580170 | 4.4:-2861039 | MS.gene05930:CDS |
| TGGGCCAAATACAGGAGAGT+AGG | 0.583242 | 4.4:+2858312 | None:intergenic |
| TGCAGATGGACAATCGATGT+GGG | 0.585081 | 4.4:-2857914 | MS.gene05930:intron |
| ACTCTGCACCCAAAACAGAC+TGG | 0.587891 | 4.4:-2858973 | MS.gene05930:CDS |
| GAAACACATGGCACTCTGGA+TGG | 0.590908 | 4.4:-2860396 | MS.gene05930:CDS |
| AGCAAAATACATTGCTCCCG+TGG | 0.597392 | 4.4:+2858385 | None:intergenic |
| GGATTAAAAGGATGCAATGG+TGG | 0.606728 | 4.4:-2860716 | MS.gene05930:CDS |
| TTGAAGAAGATATGGAAACT+GGG | 0.607550 | 4.4:-2861127 | None:intergenic |
| AAAATGTTGAGAAGGCAAGA+AGG | 0.607677 | 4.4:+2859380 | None:intergenic |
| GCATAATCAGCTTCATCACA+TGG | 0.608507 | 4.4:-2860014 | MS.gene05930:CDS |
| CATATGTCGTCTGTTTGGTG+GGG | 0.610341 | 4.4:-2859436 | MS.gene05930:CDS |
| CTGCAGATGGACAATCGATG+TGG | 0.615803 | 4.4:-2857915 | MS.gene05930:intron |
| CATATCCCTGCAGTTCCGGA+AGG | 0.616238 | 4.4:-2858468 | MS.gene05930:intron |
| GAAACTGGGGAAAGCAACAA+TGG | 0.619670 | 4.4:-2861113 | MS.gene05930:CDS |
| TAAATTTGAATAAAGCCGGA+AGG | 0.631409 | 4.4:+2860319 | None:intergenic |
| ACAGGATTAAAAGGATGCAA+TGG | 0.633035 | 4.4:-2860719 | MS.gene05930:intron |
| TGTGGGGTGGACCAGCACCT+GGG | 0.634750 | 4.4:-2857897 | MS.gene05930:CDS |
| TTTCGGGTGCAGAGACACGC+TGG | 0.640882 | 4.4:+2859319 | None:intergenic |
| TGAAGAAGATATGGAAACTG+GGG | 0.648363 | 4.4:-2861126 | None:intergenic |
| GAAGGATGATACACCAGCAG+AGG | 0.655362 | 4.4:-2858450 | MS.gene05930:CDS |
| ATGCTGGTATTCTAACTCCA+GGG | 0.658480 | 4.4:-2859199 | MS.gene05930:CDS |
| ACACATGGCACTCTGGATGG+TGG | 0.661486 | 4.4:-2860393 | MS.gene05930:CDS |
| GATGGACAATCGATGTGGGG+TGG | 0.670497 | 4.4:-2857910 | MS.gene05930:CDS |
| AAAGCAACAATGGTAATGAG+AGG | 0.674245 | 4.4:-2861103 | MS.gene05930:CDS |
| CACCAAACAGACGACATATG+CGG | 0.707786 | 4.4:+2859439 | None:intergenic |
| TGGTGGAAAAGACTGTTTGG+GGG | 0.727512 | 4.4:-2860699 | MS.gene05930:CDS |
| GCAGATGGACAATCGATGTG+GGG | 0.732619 | 4.4:-2857913 | MS.gene05930:intron |
| ATGGTGGAAAAGACTGTTTG+GGG | 0.733016 | 4.4:-2860700 | MS.gene05930:CDS |
| TAAAGCAAAAGAGAAACACA+TGG | 0.747169 | 4.4:-2860408 | MS.gene05930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATTTAGGATAATATA+AGG | - | chr4.4:2859461-2859480 | MS.gene05930:CDS | 10.0% |
| !! | AAAAGTAATAAGATAGATAA+AGG | + | chr4.4:2860270-2860289 | None:intergenic | 15.0% |
| !! | TAGTTATTCATATTCATTTA+TGG | - | chr4.4:2858447-2858466 | MS.gene05930:CDS | 15.0% |
| !! | TGTGCTTATATTATATAAAA+AGG | - | chr4.4:2859211-2859230 | MS.gene05930:intron | 15.0% |
| !! | TTTATATAATATAAGCACAA+TGG | + | chr4.4:2859210-2859229 | None:intergenic | 15.0% |
| !!! | AAAATGTTTTAAACAAGTAA+AGG | + | chr4.4:2859733-2859752 | None:intergenic | 15.0% |
| !!! | TTAGCTTGAATTTTATTATT+AGG | - | chr4.4:2860494-2860513 | MS.gene05930:intron | 15.0% |
| !!! | TTTATCTATCTTATTACTTT+TGG | - | chr4.4:2860269-2860288 | MS.gene05930:intron | 15.0% |
| !!! | TTTCAATAAAAATGTTTTTG+TGG | + | chr4.4:2860961-2860980 | None:intergenic | 15.0% |
| !! | TAAAAAATGGAAATTAAGAG+AGG | + | chr4.4:2859936-2859955 | None:intergenic | 20.0% |
| !! | TAATAATAAATTCAACCTAC+AGG | - | chr4.4:2858267-2858286 | MS.gene05930:intron | 20.0% |
| !! | TTTCATGTATATAACTGAAA+AGG | + | chr4.4:2858370-2858389 | None:intergenic | 20.0% |
| !!! | AAACATTAGGCTATAATTTT+TGG | + | chr4.4:2860230-2860249 | None:intergenic | 20.0% |
| !!! | AACATTAGGCTATAATTTTT+GGG | + | chr4.4:2860229-2860248 | None:intergenic | 20.0% |
| !!! | AAGACAGCTATAAAATTTTA+CGG | + | chr4.4:2860858-2860877 | None:intergenic | 20.0% |
| !!! | AATACATTTCTTTTCATTGT+TGG | - | chr4.4:2860350-2860369 | MS.gene05930:CDS | 20.0% |
| !!! | ACAAGTTGATCAATTTATTT+AGG | - | chr4.4:2859450-2859469 | MS.gene05930:CDS | 20.0% |
| !!! | AGTACTTTTGACAATAAATT+TGG | + | chr4.4:2859262-2859281 | None:intergenic | 20.0% |
| !!! | TTAGATTTGATTTAAACCAA+TGG | + | chr4.4:2858250-2858269 | None:intergenic | 20.0% |
| ! | AAACAAGAAACCATATGATA+TGG | + | chr4.4:2860715-2860734 | None:intergenic | 25.0% |
| ! | AACAAGAAACCATATGATAT+GGG | + | chr4.4:2860714-2860733 | None:intergenic | 25.0% |
| ! | AACAATAGACTAGAAACATT+AGG | + | chr4.4:2860243-2860262 | None:intergenic | 25.0% |
| ! | AATCTCAAGCATATTATTCA+TGG | + | chr4.4:2859096-2859115 | None:intergenic | 25.0% |
| ! | AATGTAGAAATAAGAAACAG+GGG | - | chr4.4:2860748-2860767 | MS.gene05930:intron | 25.0% |
| ! | ACCATAAATTTGAATAAAGC+CGG | + | chr4.4:2858692-2858711 | None:intergenic | 25.0% |
| ! | ATAGAAAAAAACCACTAATC+TGG | - | chr4.4:2859356-2859375 | MS.gene05930:CDS | 25.0% |
| ! | ATTGTATCAAAGGAATTACT+AGG | + | chr4.4:2858794-2858813 | None:intergenic | 25.0% |
| ! | CAATGAAAGCAACAATATAT+TGG | + | chr4.4:2858199-2858218 | None:intergenic | 25.0% |
| ! | CAATGTAGAAATAAGAAACA+GGG | - | chr4.4:2860747-2860766 | MS.gene05930:intron | 25.0% |
| ! | CCATCATATATAAGATTAAG+AGG | + | chr4.4:2858870-2858889 | None:intergenic | 25.0% |
| ! | CCTCTTAATCTTATATATGA+TGG | - | chr4.4:2858867-2858886 | MS.gene05930:intron | 25.0% |
| ! | TAACCTATTGCAGATAAAAT+TGG | + | chr4.4:2859785-2859804 | None:intergenic | 25.0% |
| ! | TAATGAAGAAAATGTTGAGA+AGG | + | chr4.4:2859635-2859654 | None:intergenic | 25.0% |
| ! | TACATGAAATTAGTCACTAA+AGG | - | chr4.4:2858381-2858400 | MS.gene05930:CDS | 25.0% |
| ! | TCAATGTAGAAATAAGAAAC+AGG | - | chr4.4:2860746-2860765 | MS.gene05930:intron | 25.0% |
| ! | TGATCATTGATGAATAACAA+TGG | + | chr4.4:2860794-2860813 | None:intergenic | 25.0% |
| ! | TGGTAAAAGAATTGTATCAA+AGG | + | chr4.4:2858804-2858823 | None:intergenic | 25.0% |
| ! | TTATGCTAATTAGTTGGATT+AGG | + | chr4.4:2858976-2858995 | None:intergenic | 25.0% |
| ! | TTTATATTGTCTTCCTTTGT+TGG | - | chr4.4:2859838-2859857 | MS.gene05930:intron | 25.0% |
| !! | AGACAGCTATAAAATTTTAC+GGG | + | chr4.4:2860857-2860876 | None:intergenic | 25.0% |
| !! | TAAATGTTATAGCAAGTTGA+TGG | - | chr4.4:2861051-2861070 | MS.gene05930:CDS | 25.0% |
| !! | TCAACATTTTCTTCATTACT+TGG | - | chr4.4:2859637-2859656 | MS.gene05930:intron | 25.0% |
| !! | TTGATACAATTCTTTTACCA+GGG | - | chr4.4:2858804-2858823 | MS.gene05930:intron | 25.0% |
| !! | TTTGATACAATTCTTTTACC+AGG | - | chr4.4:2858803-2858822 | MS.gene05930:intron | 25.0% |
| !! | TTTTCATGGCATTTATTTGA+TGG | + | chr4.4:2860194-2860213 | None:intergenic | 25.0% |
| !!! | AATGTATTTTGCTATGCTAT+TGG | - | chr4.4:2860629-2860648 | MS.gene05930:intron | 25.0% |
| !!! | AGGGATATTCATTTTTCTTT+TGG | - | chr4.4:2859169-2859188 | MS.gene05930:CDS | 25.0% |
| !!! | ATAATGTTTTTGTCAACTAC+TGG | - | chr4.4:2858562-2858581 | MS.gene05930:CDS | 25.0% |
| !!! | ATATATTGTTGCTTTCATTG+AGG | - | chr4.4:2858199-2858218 | MS.gene05930:intron | 25.0% |
| !!! | CTTATTTTATATTTGAGCGT+CGG | - | chr4.4:2859956-2859975 | MS.gene05930:intron | 25.0% |
| !!! | GTTTTAAACAAGTAAAGGTA+TGG | + | chr4.4:2859728-2859747 | None:intergenic | 25.0% |
| !!! | TTATTTTATATTTGAGCGTC+GGG | - | chr4.4:2859957-2859976 | MS.gene05930:intron | 25.0% |
| AAGTAGAACACACAATTTGT+TGG | + | chr4.4:2858172-2858191 | None:intergenic | 30.0% | |
| ACAGATTATGCATTTATACC+TGG | + | chr4.4:2858742-2858761 | None:intergenic | 30.0% | |
| AGCTGATTATGCTAATTAGT+TGG | + | chr4.4:2858982-2859001 | None:intergenic | 30.0% | |
| ATTCAACCTACAGGATTAAA+AGG | - | chr4.4:2858276-2858295 | MS.gene05930:intron | 30.0% | |
| CAAACAACATCACATGAATA+TGG | + | chr4.4:2859539-2859558 | None:intergenic | 30.0% | |
| GAAAGCAACAATATATTGGA+TGG | + | chr4.4:2858195-2858214 | None:intergenic | 30.0% | |
| GGCTAAATGATATATGACAA+TGG | + | chr4.4:2858106-2858125 | None:intergenic | 30.0% | |
| GGGATATGTAAGAAAGTTAT+TGG | + | chr4.4:2860524-2860543 | None:intergenic | 30.0% | |
| TAAAGCAAAAGAGAAACACA+TGG | - | chr4.4:2858596-2858615 | MS.gene05930:CDS | 30.0% | |
| TAAATTTGAATAAAGCCGGA+AGG | + | chr4.4:2858688-2858707 | None:intergenic | 30.0% | |
| TATCAGCTCATTGAATTACT+TGG | + | chr4.4:2860916-2860935 | None:intergenic | 30.0% | |
| TCATATCCAATGATTCTTCA+TGG | - | chr4.4:2857928-2857947 | MS.gene05930:intron | 30.0% | |
| TCATATGAATATGATGCCAT+TGG | - | chr4.4:2858231-2858250 | MS.gene05930:intron | 30.0% | |
| TCATATTCATTTATGGTGAG+TGG | - | chr4.4:2858454-2858473 | MS.gene05930:CDS | 30.0% | |
| TCGTACAACATAACTTGATT+TGG | - | chr4.4:2859754-2859773 | MS.gene05930:intron | 30.0% | |
| TGATATAGAATGTCTGAACT+TGG | + | chr4.4:2858543-2858562 | None:intergenic | 30.0% | |
| TGGAAAAAACCATAACCATA+TGG | + | chr4.4:2860588-2860607 | None:intergenic | 30.0% | |
| ! | AAATGCAAAAGCACAGTATT+AGG | + | chr4.4:2859388-2859407 | None:intergenic | 30.0% |
| ! | ACAACAGTTATTGAGTTTTG+TGG | + | chr4.4:2860833-2860852 | None:intergenic | 30.0% |
| ! | TCACTAAAGGCTTTGTATAA+AGG | - | chr4.4:2858394-2858413 | MS.gene05930:CDS | 30.0% |
| ! | TCTCCAATTTTATCTGCAAT+AGG | - | chr4.4:2859779-2859798 | MS.gene05930:intron | 30.0% |
| ! | TGATACAATTCTTTTACCAG+GGG | - | chr4.4:2858805-2858824 | MS.gene05930:intron | 30.0% |
| ! | TGTTGGTTGACAAATGATAA+TGG | - | chr4.4:2860367-2860386 | MS.gene05930:CDS | 30.0% |
| !! | CAACGTTTTAACAATAGCAA+GGG | - | chr4.4:2859150-2859169 | MS.gene05930:intron | 30.0% |
| !! | CACACAATTTGTTGGTTAAA+TGG | + | chr4.4:2858164-2858183 | None:intergenic | 30.0% |
| !! | GGATCATTTTGATGTACATT+TGG | - | chr4.4:2859589-2859608 | MS.gene05930:intron | 30.0% |
| !! | TATTTTGCTATGCTATTGGT+TGG | - | chr4.4:2860633-2860652 | MS.gene05930:intron | 30.0% |
| !! | TCAACGTTTTAACAATAGCA+AGG | - | chr4.4:2859149-2859168 | MS.gene05930:intron | 30.0% |
| !! | TCCGGCTTTATTCAAATTTA+TGG | - | chr4.4:2858688-2858707 | MS.gene05930:intron | 30.0% |
| !! | TTATTGAGTTTTGTGGTTTC+TGG | + | chr4.4:2860826-2860845 | None:intergenic | 30.0% |
| !!! | TTTCCATTTTGTTTTTGCCA+CGG | - | chr4.4:2860602-2860621 | MS.gene05930:intron | 30.0% |
| AAAATGTTGAGAAGGCAAGA+AGG | + | chr4.4:2859627-2859646 | None:intergenic | 35.0% | |
| AACACTGATCAGACAACAAT+TGG | + | chr4.4:2859306-2859325 | None:intergenic | 35.0% | |
| ACAGGATTAAAAGGATGCAA+TGG | - | chr4.4:2858285-2858304 | MS.gene05930:intron | 35.0% | |
| ACTGAACCATGAAGAATCAT+TGG | + | chr4.4:2857937-2857956 | None:intergenic | 35.0% | |
| ATATCCTACTCTCCTGTATT+TGG | - | chr4.4:2860688-2860707 | MS.gene05930:CDS | 35.0% | |
| ATATGATATGGGCCAAATAC+AGG | + | chr4.4:2860703-2860722 | None:intergenic | 35.0% | |
| ATCACATGAATATGGCTGTA+TGG | + | chr4.4:2859531-2859550 | None:intergenic | 35.0% | |
| ATTAGCCAGCAGAAAAATCA+AGG | + | chr4.4:2858006-2858025 | None:intergenic | 35.0% | |
| ATTCAGAGTTTATGCTAACC+TGG | + | chr4.4:2860474-2860493 | None:intergenic | 35.0% | |
| CAAAACTGTTCAGCAAAAGT+TGG | + | chr4.4:2859887-2859906 | None:intergenic | 35.0% | |
| CAAAGCTTTACAGGTAGAAT+AGG | + | chr4.4:2859414-2859433 | None:intergenic | 35.0% | |
| CACAGATAGAACATACTTTC+GGG | + | chr4.4:2859704-2859723 | None:intergenic | 35.0% | |
| CCACAGATAGAACATACTTT+CGG | + | chr4.4:2859705-2859724 | None:intergenic | 35.0% | |
| CTGAAAAATATGCATCACGT+TGG | - | chr4.4:2859032-2859051 | MS.gene05930:intron | 35.0% | |
| GAATGTCTGAACTTGGATTA+AGG | + | chr4.4:2858536-2858555 | None:intergenic | 35.0% | |
| GATGATGTACCATATGGTTA+TGG | - | chr4.4:2860576-2860595 | MS.gene05930:intron | 35.0% | |
| GATTATGCATTTATACCTGG+AGG | + | chr4.4:2858739-2858758 | None:intergenic | 35.0% | |
| GGTAAAAGTAAGACTATACC+CGG | + | chr4.4:2858849-2858868 | None:intergenic | 35.0% | |
| TATCTGCAATAGGTTAATGC+TGG | - | chr4.4:2859789-2859808 | MS.gene05930:intron | 35.0% | |
| TATGCCTATCAAAGCTTTAC+AGG | + | chr4.4:2859423-2859442 | None:intergenic | 35.0% | |
| TCGTAGTGCTTTAACAGAAA+TGG | - | chr4.4:2858055-2858074 | MS.gene05930:intron | 35.0% | |
| TGTATTTGGCCCATATCATA+TGG | - | chr4.4:2860702-2860721 | MS.gene05930:CDS | 35.0% | |
| TTCTTCGGTTAGAGAAAAAC+AGG | - | chr4.4:2859062-2859081 | MS.gene05930:intron | 35.0% | |
| TTTGTGAGCTCATAACTATC+AGG | + | chr4.4:2860119-2860138 | None:intergenic | 35.0% | |
| ! | AAAGCAACAATGGTAATGAG+AGG | - | chr4.4:2857901-2857920 | MS.gene05930:CDS | 35.0% |
| ! | AATGGTGGAAAAGACTGTTT+GGG | - | chr4.4:2858303-2858322 | MS.gene05930:intron | 35.0% |
| ! | ATGATTTGCCATAATAAGCG+TGG | + | chr4.4:2858140-2858159 | None:intergenic | 35.0% |
| ! | GGAATAAGTAGCAGTTTTCA+TGG | + | chr4.4:2860208-2860227 | None:intergenic | 35.0% |
| ! | GTTATTGCGACATTTTCAAC+AGG | - | chr4.4:2860430-2860449 | MS.gene05930:CDS | 35.0% |
| ! | TCTACCTGTAAAGCTTTGAT+AGG | - | chr4.4:2859416-2859435 | MS.gene05930:CDS | 35.0% |
| ! | TGATTTGCCATAATAAGCGT+GGG | + | chr4.4:2858139-2858158 | None:intergenic | 35.0% |
| ! | TGCTAATTAGTTGGATTAGG+AGG | + | chr4.4:2858973-2858992 | None:intergenic | 35.0% |
| ! | TTATGCCTTGATTTTTCTGC+TGG | - | chr4.4:2857998-2858017 | MS.gene05930:intron | 35.0% |
| ! | TTGCATCCTTTTAATCCTGT+AGG | + | chr4.4:2858285-2858304 | None:intergenic | 35.0% |
| !! | AAAAGTACTCTAGAGTGTAG+AGG | - | chr4.4:2859273-2859292 | MS.gene05930:intron | 35.0% |
| !! | AAAGTACTCTAGAGTGTAGA+GGG | - | chr4.4:2859274-2859293 | MS.gene05930:intron | 35.0% |
| !! | CAAATGATAATGGCTGTTGT+TGG | - | chr4.4:2860377-2860396 | MS.gene05930:CDS | 35.0% |
| !! | CACGTTGGTAAGATTTTCTT+CGG | - | chr4.4:2859047-2859066 | MS.gene05930:intron | 35.0% |
| !! | TTAGGTTGATACCAGATTAG+TGG | + | chr4.4:2859370-2859389 | None:intergenic | 35.0% |
| !!! | ATCCCATTTTTTCTACCTTC+CGG | - | chr4.4:2858670-2858689 | MS.gene05930:intron | 35.0% |
| !!! | TTCCATTTTGTTTTTGCCAC+GGG | - | chr4.4:2860603-2860622 | MS.gene05930:intron | 35.0% |
| AAACCCTGAAAAGGAATGAC+AGG | + | chr4.4:2858949-2858968 | None:intergenic | 40.0% | |
| AAATGCATCCAATCCTTGGA+TGG | - | chr4.4:2857965-2857984 | MS.gene05930:intron | 40.0% | |
| AAGCCGGAAGGTAGAAAAAA+TGG | + | chr4.4:2858676-2858695 | None:intergenic | 40.0% | |
| AATGCTGGTATTCTAACTCC+AGG | - | chr4.4:2859804-2859823 | MS.gene05930:intron | 40.0% | |
| AGCCGGAAGGTAGAAAAAAT+GGG | + | chr4.4:2858675-2858694 | None:intergenic | 40.0% | |
| ATATCTTGCCATCCAAGGAT+TGG | + | chr4.4:2857976-2857995 | None:intergenic | 40.0% | |
| ATGCTGGTATTCTAACTCCA+GGG | - | chr4.4:2859805-2859824 | MS.gene05930:intron | 40.0% | |
| CATAGATTCCAAATGCTTCC+AGG | - | chr4.4:2860453-2860472 | MS.gene05930:CDS | 40.0% | |
| CATTGAATTACTTGGCGTCA+GGG | + | chr4.4:2860908-2860927 | None:intergenic | 40.0% | |
| GCATAATCAGCTTCATCACA+TGG | - | chr4.4:2858990-2859009 | MS.gene05930:CDS | 40.0% | |
| GGATTAAAAGGATGCAATGG+TGG | - | chr4.4:2858288-2858307 | MS.gene05930:intron | 40.0% | |
| TAAGCATATCTTGCCATCCA+AGG | + | chr4.4:2857981-2858000 | None:intergenic | 40.0% | |
| TCATTGAATTACTTGGCGTC+AGG | + | chr4.4:2860909-2860928 | None:intergenic | 40.0% | |
| TCCAAGGATTGGATGCATTT+CGG | + | chr4.4:2857965-2857984 | None:intergenic | 40.0% | |
| TGGATACACGTATGTGACAA+TGG | + | chr4.4:2860174-2860193 | None:intergenic | 40.0% | |
| TTAGGAGGAAAACCCTGAAA+AGG | + | chr4.4:2858958-2858977 | None:intergenic | 40.0% | |
| TTATCTTTCAACAAGCCTCC+AGG | - | chr4.4:2858721-2858740 | MS.gene05930:intron | 40.0% | |
| TTCTCACTTGTAGTGTTCGT+TGG | - | chr4.4:2860996-2861015 | MS.gene05930:CDS | 40.0% | |
| TTGCATGACAGAATATCAGC+TGG | - | chr4.4:2860880-2860899 | MS.gene05930:intron | 40.0% | |
| ! | ATGCTTAGCCAGTCTGTTTT+GGG | + | chr4.4:2860042-2860061 | None:intergenic | 40.0% |
| ! | ATGGTGGAAAAGACTGTTTG+GGG | - | chr4.4:2858304-2858323 | MS.gene05930:intron | 40.0% |
| ! | CAATGGTGGAAAAGACTGTT+TGG | - | chr4.4:2858302-2858321 | MS.gene05930:intron | 40.0% |
| ! | CCGAAAGTATGTTCTATCTG+TGG | - | chr4.4:2859702-2859721 | MS.gene05930:intron | 40.0% |
| ! | GGTTAGTCAAGATTGCTTTG+TGG | - | chr4.4:2858632-2858651 | MS.gene05930:intron | 40.0% |
| ! | GTTCCTGTCATTCCTTTTCA+GGG | - | chr4.4:2858943-2858962 | MS.gene05930:intron | 40.0% |
| ! | TACAATTCTTTTACCAGGGG+AGG | - | chr4.4:2858808-2858827 | MS.gene05930:intron | 40.0% |
| ! | TGTTCCTGTCATTCCTTTTC+AGG | - | chr4.4:2858942-2858961 | MS.gene05930:intron | 40.0% |
| ! | TTGCTATGCTATTGGTTGGA+TGG | - | chr4.4:2860637-2860656 | MS.gene05930:intron | 40.0% |
| !! | AAGTACTCTAGAGTGTAGAG+GGG | - | chr4.4:2859275-2859294 | MS.gene05930:intron | 40.0% |
| !! | TATGCTAACCTGGAAGCATT+TGG | + | chr4.4:2860464-2860483 | None:intergenic | 40.0% |
| !! | TTTTCTGCTGGCTAATCTGT+TGG | - | chr4.4:2858010-2858029 | MS.gene05930:intron | 40.0% |
| AAGAGAAACACATGGCACTC+TGG | - | chr4.4:2858604-2858623 | MS.gene05930:CDS | 45.0% | |
| AGCAAAATACATTGCTCCCG+TGG | + | chr4.4:2860622-2860641 | None:intergenic | 45.0% | |
| ATTCTAACTCCAGGGCTGAT+GGG | - | chr4.4:2859813-2859832 | MS.gene05930:intron | 45.0% | |
| CACCAAACAGACGACATATG+CGG | + | chr4.4:2859568-2859587 | None:intergenic | 45.0% | |
| CTCCCGTGGCAAAAACAAAA+TGG | + | chr4.4:2860608-2860627 | None:intergenic | 45.0% | |
| CTTACATATCCCTGCAGTTC+CGG | - | chr4.4:2860532-2860551 | MS.gene05930:intron | 45.0% | |
| GAAACTGGGGAAAGCAACAA+TGG | - | chr4.4:2857891-2857910 | MS.gene05930:CDS | 45.0% | |
| GCAGAGGATGATGTACCATA+TGG | - | chr4.4:2860570-2860589 | MS.gene05930:intron | 45.0% | |
| GCATATGTCGTCTGTTTGGT+GGG | - | chr4.4:2859567-2859586 | MS.gene05930:intron | 45.0% | |
| GTCCATCTGCAGAAGAATGA+AGG | + | chr4.4:2861081-2861100 | None:intergenic | 45.0% | |
| TATGGTACATCATCCTCTGC+TGG | + | chr4.4:2860570-2860589 | None:intergenic | 45.0% | |
| TATTCTAACTCCAGGGCTGA+TGG | - | chr4.4:2859812-2859831 | MS.gene05930:intron | 45.0% | |
| TCCGAAATGCATCCAATCCT+TGG | - | chr4.4:2857961-2857980 | MS.gene05930:intron | 45.0% | |
| TGCAGATGGACAATCGATGT+GGG | - | chr4.4:2861090-2861109 | MS.gene05930:CDS | 45.0% | |
| TGCCTTCATTCTTCTGCAGA+TGG | - | chr4.4:2861076-2861095 | MS.gene05930:CDS | 45.0% | |
| TGGTGGAAAAGACTGTTTGG+GGG | - | chr4.4:2858305-2858324 | MS.gene05930:intron | 45.0% | |
| TTCTAATGGCGCACCAACAA+AGG | + | chr4.4:2859854-2859873 | None:intergenic | 45.0% | |
| TTGCAGTCCCACGCTTATTA+TGG | - | chr4.4:2858129-2858148 | MS.gene05930:intron | 45.0% | |
| TTGGCAAACCTGCCTTCTAA+TGG | + | chr4.4:2859868-2859887 | None:intergenic | 45.0% | |
| TTTGTATGCAGTGAACCTGC+TGG | - | chr4.4:2859985-2860004 | MS.gene05930:CDS | 45.0% | |
| TTTGTTGGTGCGCCATTAGA+AGG | - | chr4.4:2859853-2859872 | MS.gene05930:intron | 45.0% | |
| ! | AATTCTTTTACCAGGGGAGG+TGG | - | chr4.4:2858811-2858830 | MS.gene05930:intron | 45.0% |
| ! | CATATGTCGTCTGTTTGGTG+GGG | - | chr4.4:2859568-2859587 | MS.gene05930:intron | 45.0% |
| ! | GATGCTTAGCCAGTCTGTTT+TGG | + | chr4.4:2860043-2860062 | None:intergenic | 45.0% |
| !! | AATATAAAATAAGTAAAAAA+TGG | + | chr4.4:2859949-2859968 | None:intergenic | 5.0% |
| AAAGACTGTTTGGGGGCTGA+AGG | - | chr4.4:2858312-2858331 | MS.gene05930:intron | 50.0% | |
| ACTCTGCACCCAAAACAGAC+TGG | - | chr4.4:2860031-2860050 | MS.gene05930:CDS | 50.0% | |
| ATAAGCGTGGGACTGCAAGA+AGG | + | chr4.4:2858127-2858146 | None:intergenic | 50.0% | |
| ATATAAAGCCCCATCAGCCC+TGG | + | chr4.4:2859825-2859844 | None:intergenic | 50.0% | |
| ATCATCCTTCCGGAACTGCA+GGG | + | chr4.4:2860544-2860563 | None:intergenic | 50.0% | |
| CGCATATGTCGTCTGTTTGG+TGG | - | chr4.4:2859566-2859585 | MS.gene05930:intron | 50.0% | |
| CTGCAGATGGACAATCGATG+TGG | - | chr4.4:2861089-2861108 | MS.gene05930:CDS | 50.0% | |
| CTGCTGGAGAAAACTGCATC+AGG | - | chr4.4:2860001-2860020 | MS.gene05930:CDS | 50.0% | |
| CTGCTGGTGTATCATCCTTC+CGG | + | chr4.4:2860554-2860573 | None:intergenic | 50.0% | |
| GAAACACATGGCACTCTGGA+TGG | - | chr4.4:2858608-2858627 | MS.gene05930:intron | 50.0% | |
| GAAGGATGATACACCAGCAG+AGG | - | chr4.4:2860554-2860573 | MS.gene05930:intron | 50.0% | |
| GACCGCATATGTCGTCTGTT+TGG | - | chr4.4:2859563-2859582 | MS.gene05930:intron | 50.0% | |
| GCAGATGGACAATCGATGTG+GGG | - | chr4.4:2861091-2861110 | MS.gene05930:CDS | 50.0% | |
| GCTGGCTAATCTGTTGGCAT+GGG | - | chr4.4:2858016-2858035 | MS.gene05930:intron | 50.0% | |
| TATCATCCTTCCGGAACTGC+AGG | + | chr4.4:2860545-2860564 | None:intergenic | 50.0% | |
| TGGGCCAAATACAGGAGAGT+AGG | + | chr4.4:2860695-2860714 | None:intergenic | 50.0% | |
| TTCTAACTCCAGGGCTGATG+GGG | - | chr4.4:2859814-2859833 | MS.gene05930:intron | 50.0% | |
| TTGAGAAGGCAAGAAGGCTC+TGG | + | chr4.4:2859621-2859640 | None:intergenic | 50.0% | |
| TTTGTGGCACTGCTGAGTGA+TGG | + | chr4.4:2860945-2860964 | None:intergenic | 50.0% | |
| ! | CTGATGCAGTTTTCTCCAGC+AGG | + | chr4.4:2860003-2860022 | None:intergenic | 50.0% |
| ! | TGCTGGCTAATCTGTTGGCA+TGG | - | chr4.4:2858015-2858034 | MS.gene05930:intron | 50.0% |
| ACACATGGCACTCTGGATGG+TGG | - | chr4.4:2858611-2858630 | MS.gene05930:intron | 55.0% | |
| CATATCCCTGCAGTTCCGGA+AGG | - | chr4.4:2860536-2860555 | MS.gene05930:intron | 55.0% | |
| GAGACACGCTGGTCATGAGT+TGG | + | chr4.4:2859677-2859696 | None:intergenic | 55.0% | |
| GATGGACAATCGATGTGGGG+TGG | - | chr4.4:2861094-2861113 | MS.gene05930:CDS | 55.0% | |
| TTGGTGCGCCATTAGAAGGC+AGG | - | chr4.4:2859857-2859876 | MS.gene05930:intron | 55.0% | |
| ! | AGGCGTTTTGCGAGTGAGCT+TGG | - | chr4.4:2858332-2858351 | MS.gene05930:CDS | 55.0% |
| ! | GGCGTTTTGCGAGTGAGCTT+GGG | - | chr4.4:2858333-2858352 | MS.gene05930:CDS | 55.0% |
| ! | GCATGGGCTGCTCGTGACTA+TGG | - | chr4.4:2858032-2858051 | MS.gene05930:intron | 60.0% |
| ! | TTTCGGGTGCAGAGACACGC+TGG | + | chr4.4:2859688-2859707 | None:intergenic | 60.0% |
| !! | GAGGTGGCGCATTTTGGTGC+CGG | - | chr4.4:2858827-2858846 | MS.gene05930:intron | 60.0% |
| !!! | AGGTGGCGCATTTTGGTGCC+GGG | - | chr4.4:2858828-2858847 | MS.gene05930:intron | 60.0% |
| ATGTGGGGTGGACCAGCACC+TGG | - | chr4.4:2861106-2861125 | MS.gene05930:CDS | 65.0% | |
| CCAAAATGCGCCACCTCCCC+TGG | + | chr4.4:2858824-2858843 | None:intergenic | 65.0% | |
| TGTGGGGTGGACCAGCACCT+GGG | - | chr4.4:2861107-2861126 | MS.gene05930:CDS | 65.0% | |
| ! | CCAGGGGAGGTGGCGCATTT+TGG | - | chr4.4:2858821-2858840 | MS.gene05930:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 2857888 | 2861138 | 2857888 | ID=MS.gene05930 |
| chr4.4 | mRNA | 2857888 | 2861138 | 2857888 | ID=MS.gene05930.t1;Parent=MS.gene05930 |
| chr4.4 | exon | 2860946 | 2861138 | 2860946 | ID=MS.gene05930.t1.exon1;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2860946 | 2861138 | 2860946 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| chr4.4 | exon | 2860664 | 2860737 | 2860664 | ID=MS.gene05930.t1.exon2;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2860664 | 2860737 | 2860664 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| chr4.4 | exon | 2860317 | 2860476 | 2860317 | ID=MS.gene05930.t1.exon3;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2860317 | 2860476 | 2860317 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| chr4.4 | exon | 2860177 | 2860201 | 2860177 | ID=MS.gene05930.t1.exon4;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2860177 | 2860201 | 2860177 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| chr4.4 | exon | 2859973 | 2860062 | 2859973 | ID=MS.gene05930.t1.exon5;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2859973 | 2860062 | 2859973 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| chr4.4 | exon | 2859319 | 2859490 | 2859319 | ID=MS.gene05930.t1.exon6;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2859319 | 2859490 | 2859319 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| chr4.4 | exon | 2859152 | 2859225 | 2859152 | ID=MS.gene05930.t1.exon7;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2859152 | 2859225 | 2859152 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| chr4.4 | exon | 2858961 | 2859030 | 2858961 | ID=MS.gene05930.t1.exon8;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2858961 | 2859030 | 2858961 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| chr4.4 | exon | 2858552 | 2858623 | 2858552 | ID=MS.gene05930.t1.exon9;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2858552 | 2858623 | 2858552 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| chr4.4 | exon | 2858324 | 2858477 | 2858324 | ID=MS.gene05930.t1.exon10;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2858324 | 2858477 | 2858324 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| chr4.4 | exon | 2857888 | 2857931 | 2857888 | ID=MS.gene05930.t1.exon11;Parent=MS.gene05930.t1 |
| chr4.4 | CDS | 2857888 | 2857931 | 2857888 | ID=cds.MS.gene05930.t1;Parent=MS.gene05930.t1 |
| Gene Sequence |
| Protein sequence |
