Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27274.t1 | XP_003589345.1 | 96.8 | 403 | 2 | 5 | 1 | 395 | 1 | 400 | 8.50E-209 | 736.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27274.t1 | Q94AP3 | 74.7 | 399 | 87 | 7 | 1 | 395 | 1 | 389 | 8.2e-160 | 564.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27274.t1 | G7I5V7 | 96.8 | 403 | 2 | 5 | 1 | 395 | 1 | 400 | 6.1e-209 | 736.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049133 | MS.gene27274 | 0.805799 | 1.12E-49 | -1.69E-46 |
| MS.gene049418 | MS.gene27274 | 0.896389 | 3.87E-76 | -1.69E-46 |
| MS.gene049622 | MS.gene27274 | 0.811983 | 5.33E-51 | -1.69E-46 |
| MS.gene049660 | MS.gene27274 | 0.829235 | 5.77E-55 | -1.69E-46 |
| MS.gene049989 | MS.gene27274 | 0.83408 | 3.69E-56 | -1.69E-46 |
| MS.gene050297 | MS.gene27274 | 0.830364 | 3.06E-55 | -1.69E-46 |
| MS.gene050310 | MS.gene27274 | 0.802183 | 6.33E-49 | -1.69E-46 |
| MS.gene05054 | MS.gene27274 | 0.823309 | 1.48E-53 | -1.69E-46 |
| MS.gene051067 | MS.gene27274 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene051263 | MS.gene27274 | 0.812248 | 4.66E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene27274 | 0.820845 | 5.53E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene27274 | 0.835033 | 2.12E-56 | -1.69E-46 |
| MS.gene052150 | MS.gene27274 | 0.808768 | 2.63E-50 | -1.69E-46 |
| MS.gene052151 | MS.gene27274 | 0.818113 | 2.32E-52 | -1.69E-46 |
| MS.gene053536 | MS.gene27274 | 0.803279 | 3.76E-49 | -1.69E-46 |
| MS.gene053538 | MS.gene27274 | 0.803713 | 3.06E-49 | -1.69E-46 |
| MS.gene055537 | MS.gene27274 | 0.817697 | 2.88E-52 | -1.69E-46 |
| MS.gene056169 | MS.gene27274 | 0.811927 | 5.48E-51 | -1.69E-46 |
| MS.gene056228 | MS.gene27274 | 0.845998 | 2.86E-59 | -1.69E-46 |
| MS.gene056704 | MS.gene27274 | 0.815601 | 8.51E-52 | -1.69E-46 |
| MS.gene056870 | MS.gene27274 | 0.817423 | 3.32E-52 | -1.69E-46 |
| MS.gene057082 | MS.gene27274 | 0.800204 | 1.61E-48 | -1.69E-46 |
| MS.gene05709 | MS.gene27274 | 0.808571 | 2.90E-50 | -1.69E-46 |
| MS.gene058196 | MS.gene27274 | 0.808832 | 2.55E-50 | -1.69E-46 |
| MS.gene058197 | MS.gene27274 | 0.843015 | 1.82E-58 | -1.69E-46 |
| MS.gene058198 | MS.gene27274 | 0.839763 | 1.30E-57 | -1.69E-46 |
| MS.gene05866 | MS.gene27274 | 0.827934 | 1.19E-54 | -1.69E-46 |
| MS.gene058823 | MS.gene27274 | 0.814789 | 1.29E-51 | -1.69E-46 |
| MS.gene059163 | MS.gene27274 | 0.819756 | 9.83E-53 | -1.69E-46 |
| MS.gene059164 | MS.gene27274 | 0.817998 | 2.47E-52 | -1.69E-46 |
| MS.gene059300 | MS.gene27274 | 0.842801 | 2.07E-58 | -1.69E-46 |
| MS.gene05930 | MS.gene27274 | 0.816864 | 4.44E-52 | -1.69E-46 |
| MS.gene060473 | MS.gene27274 | 0.814413 | 1.56E-51 | -1.69E-46 |
| MS.gene060565 | MS.gene27274 | 0.820689 | 6.01E-53 | -1.69E-46 |
| MS.gene06057 | MS.gene27274 | 0.838399 | 2.94E-57 | -1.69E-46 |
| MS.gene060825 | MS.gene27274 | 0.80832 | 3.28E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27274.t1 | MTR_1g023180 | 96.774 | 403 | 2 | 5 | 1 | 395 | 1 | 400 | 0.0 | 769 |
| MS.gene27274.t1 | MTR_3g112480 | 82.663 | 398 | 62 | 6 | 1 | 395 | 1 | 394 | 0.0 | 636 |
| MS.gene27274.t1 | MTR_3g112480 | 80.615 | 325 | 57 | 5 | 74 | 395 | 18 | 339 | 0.0 | 506 |
| MS.gene27274.t1 | MTR_3g112480 | 80.000 | 270 | 48 | 5 | 129 | 395 | 1 | 267 | 8.63e-145 | 412 |
| MS.gene27274.t1 | MTR_6g081840 | 57.808 | 365 | 122 | 4 | 30 | 394 | 19 | 351 | 2.26e-141 | 407 |
| MS.gene27274.t1 | MTR_5g021160 | 54.255 | 376 | 146 | 4 | 16 | 386 | 2 | 356 | 2.21e-136 | 394 |
| MS.gene27274.t1 | MTR_5g021160 | 52.381 | 294 | 114 | 4 | 99 | 387 | 2 | 274 | 1.74e-99 | 297 |
| MS.gene27274.t1 | MTR_5g021160 | 56.180 | 267 | 104 | 1 | 16 | 282 | 2 | 255 | 5.56e-98 | 293 |
| MS.gene27274.t1 | MTR_5g025290 | 41.003 | 339 | 199 | 1 | 18 | 356 | 8 | 345 | 4.62e-85 | 264 |
| MS.gene27274.t1 | MTR_5g025290 | 40.341 | 352 | 203 | 3 | 11 | 356 | 23 | 373 | 9.56e-85 | 264 |
| MS.gene27274.t1 | MTR_5g025340 | 37.403 | 385 | 204 | 4 | 18 | 383 | 7 | 373 | 1.08e-83 | 260 |
| MS.gene27274.t1 | MTR_5g025400 | 40.331 | 362 | 209 | 3 | 23 | 382 | 13 | 369 | 6.48e-83 | 259 |
| MS.gene27274.t1 | MTR_5g025330 | 38.095 | 399 | 212 | 7 | 18 | 394 | 6 | 391 | 2.63e-82 | 262 |
| MS.gene27274.t1 | MTR_5g025370 | 39.888 | 356 | 205 | 3 | 18 | 371 | 7 | 355 | 3.01e-82 | 256 |
| MS.gene27274.t1 | MTR_1g030580 | 38.764 | 356 | 194 | 3 | 1 | 354 | 1 | 334 | 8.65e-80 | 250 |
| MS.gene27274.t1 | MTR_8g072350 | 38.596 | 342 | 203 | 4 | 18 | 356 | 6 | 343 | 5.07e-79 | 248 |
| MS.gene27274.t1 | MTR_8g041390 | 38.643 | 339 | 196 | 2 | 18 | 355 | 10 | 337 | 4.97e-77 | 244 |
| MS.gene27274.t1 | MTR_3g072500 | 36.047 | 344 | 207 | 2 | 18 | 361 | 17 | 347 | 1.14e-76 | 243 |
| MS.gene27274.t1 | MTR_1g030600 | 39.003 | 341 | 194 | 2 | 23 | 362 | 20 | 347 | 1.40e-76 | 242 |
| MS.gene27274.t1 | MTR_1g074160 | 36.338 | 355 | 207 | 5 | 18 | 370 | 10 | 347 | 6.95e-76 | 239 |
| MS.gene27274.t1 | MTR_1g074070 | 35.754 | 358 | 210 | 4 | 18 | 373 | 13 | 352 | 2.15e-75 | 238 |
| MS.gene27274.t1 | MTR_1g074120 | 34.734 | 357 | 213 | 3 | 18 | 372 | 13 | 351 | 4.65e-75 | 237 |
| MS.gene27274.t1 | MTR_1g051120 | 34.454 | 357 | 216 | 4 | 9 | 362 | 2 | 343 | 6.08e-75 | 237 |
| MS.gene27274.t1 | MTR_3g072530 | 37.647 | 340 | 193 | 3 | 18 | 354 | 11 | 334 | 2.96e-74 | 235 |
| MS.gene27274.t1 | MTR_0096s0100 | 36.088 | 363 | 212 | 4 | 1 | 362 | 1 | 344 | 1.05e-73 | 234 |
| MS.gene27274.t1 | MTR_2g016710 | 35.398 | 339 | 202 | 2 | 18 | 356 | 5 | 326 | 1.31e-73 | 234 |
| MS.gene27274.t1 | MTR_6g036450 | 35.795 | 352 | 205 | 4 | 15 | 362 | 10 | 344 | 1.62e-72 | 231 |
| MS.gene27274.t1 | MTR_3g012420 | 38.551 | 345 | 185 | 4 | 18 | 355 | 14 | 338 | 2.29e-72 | 231 |
| MS.gene27274.t1 | MTR_1g038560 | 34.930 | 355 | 210 | 5 | 24 | 378 | 6 | 339 | 1.09e-71 | 228 |
| MS.gene27274.t1 | MTR_1g073990 | 36.857 | 350 | 202 | 4 | 18 | 365 | 13 | 345 | 3.95e-71 | 227 |
| MS.gene27274.t1 | MTR_1g074020 | 34.770 | 348 | 207 | 5 | 18 | 363 | 10 | 339 | 1.64e-70 | 226 |
| MS.gene27274.t1 | MTR_3g072560 | 37.952 | 332 | 189 | 2 | 23 | 354 | 20 | 334 | 2.33e-70 | 226 |
| MS.gene27274.t1 | MTR_1g070175 | 32.754 | 345 | 211 | 2 | 18 | 361 | 13 | 337 | 7.73e-69 | 221 |
| MS.gene27274.t1 | MTR_7g111830 | 35.045 | 331 | 207 | 1 | 24 | 354 | 10 | 332 | 1.23e-68 | 221 |
| MS.gene27274.t1 | MTR_8g006010 | 35.027 | 374 | 221 | 6 | 18 | 390 | 7 | 359 | 1.49e-68 | 221 |
| MS.gene27274.t1 | MTR_1g068630 | 36.364 | 341 | 193 | 3 | 18 | 354 | 12 | 332 | 2.72e-68 | 220 |
| MS.gene27274.t1 | MTR_2g065550 | 36.461 | 373 | 213 | 8 | 24 | 388 | 13 | 369 | 8.71e-68 | 219 |
| MS.gene27274.t1 | MTR_4g106720 | 34.024 | 338 | 207 | 4 | 25 | 361 | 15 | 337 | 9.86e-68 | 218 |
| MS.gene27274.t1 | MTR_3g095460 | 34.262 | 359 | 198 | 4 | 23 | 368 | 7 | 340 | 7.06e-66 | 213 |
| MS.gene27274.t1 | MTR_1g114210 | 34.954 | 329 | 198 | 3 | 26 | 354 | 16 | 328 | 1.40e-65 | 213 |
| MS.gene27274.t1 | MTR_7g100050 | 35.988 | 339 | 187 | 4 | 24 | 354 | 16 | 332 | 2.04e-65 | 213 |
| MS.gene27274.t1 | MTR_3g072520 | 37.612 | 335 | 195 | 2 | 23 | 356 | 11 | 332 | 1.44e-64 | 211 |
| MS.gene27274.t1 | MTR_2g007990 | 33.938 | 386 | 227 | 4 | 10 | 385 | 4 | 371 | 2.16e-64 | 211 |
| MS.gene27274.t1 | MTR_8g092650 | 35.329 | 334 | 205 | 2 | 23 | 355 | 7 | 330 | 1.23e-63 | 207 |
| MS.gene27274.t1 | MTR_1g030400 | 32.923 | 325 | 209 | 2 | 30 | 354 | 16 | 331 | 3.00e-63 | 207 |
| MS.gene27274.t1 | MTR_2g016710 | 34.286 | 315 | 190 | 2 | 18 | 332 | 5 | 302 | 2.98e-62 | 203 |
| MS.gene27274.t1 | MTR_3g090550 | 35.220 | 318 | 186 | 4 | 38 | 354 | 23 | 321 | 9.02e-62 | 202 |
| MS.gene27274.t1 | MTR_3g095420 | 33.134 | 335 | 209 | 5 | 23 | 354 | 9 | 331 | 7.12e-61 | 201 |
| MS.gene27274.t1 | MTR_8g006120 | 36.337 | 344 | 203 | 3 | 12 | 354 | 1 | 329 | 4.46e-60 | 199 |
| MS.gene27274.t1 | MTR_3g095450 | 33.832 | 334 | 208 | 3 | 23 | 354 | 7 | 329 | 5.66e-60 | 198 |
| MS.gene27274.t1 | MTR_4g129650 | 32.984 | 382 | 216 | 9 | 24 | 395 | 11 | 362 | 4.87e-59 | 196 |
| MS.gene27274.t1 | MTR_8g006090 | 35.676 | 370 | 212 | 6 | 24 | 392 | 14 | 358 | 2.28e-58 | 194 |
| MS.gene27274.t1 | MTR_5g034990 | 35.530 | 349 | 204 | 3 | 11 | 357 | 2 | 331 | 4.84e-58 | 193 |
| MS.gene27274.t1 | MTR_2g027030 | 35.952 | 331 | 199 | 3 | 26 | 356 | 17 | 334 | 5.79e-57 | 191 |
| MS.gene27274.t1 | MTR_2g007960 | 35.362 | 345 | 200 | 4 | 24 | 360 | 15 | 344 | 2.20e-55 | 187 |
| MS.gene27274.t1 | MTR_2g007260 | 36.858 | 331 | 201 | 2 | 26 | 356 | 19 | 341 | 2.44e-55 | 187 |
| MS.gene27274.t1 | MTR_2g007970 | 34.294 | 347 | 213 | 3 | 26 | 372 | 17 | 348 | 5.64e-55 | 186 |
| MS.gene27274.t1 | MTR_3g072500 | 37.743 | 257 | 147 | 2 | 105 | 361 | 1 | 244 | 6.64e-55 | 183 |
| MS.gene27274.t1 | MTR_8g006050 | 33.540 | 322 | 183 | 5 | 52 | 370 | 25 | 318 | 2.41e-53 | 181 |
| MS.gene27274.t1 | MTR_5g034910 | 30.347 | 346 | 224 | 3 | 18 | 362 | 4 | 333 | 1.28e-52 | 179 |
| MS.gene27274.t1 | MTR_3g072500 | 35.317 | 252 | 150 | 2 | 18 | 269 | 17 | 255 | 6.63e-52 | 175 |
| MS.gene27274.t1 | MTR_4g094342 | 32.081 | 346 | 213 | 3 | 10 | 349 | 2 | 331 | 7.59e-52 | 177 |
| MS.gene27274.t1 | MTR_3g095440 | 32.036 | 334 | 214 | 3 | 23 | 354 | 7 | 329 | 8.43e-52 | 177 |
| MS.gene27274.t1 | MTR_4g094362 | 30.270 | 370 | 244 | 3 | 26 | 394 | 19 | 375 | 1.15e-50 | 174 |
| MS.gene27274.t1 | MTR_1g014510 | 33.828 | 337 | 199 | 5 | 25 | 355 | 15 | 333 | 2.55e-50 | 176 |
| MS.gene27274.t1 | MTR_2g102340 | 32.530 | 332 | 207 | 5 | 26 | 356 | 17 | 332 | 2.94e-50 | 173 |
| MS.gene27274.t1 | MTR_5g034980 | 30.514 | 331 | 213 | 5 | 26 | 355 | 12 | 326 | 1.25e-49 | 171 |
| MS.gene27274.t1 | MTR_5g068790 | 29.101 | 378 | 247 | 4 | 15 | 383 | 9 | 374 | 3.12e-49 | 171 |
| MS.gene27274.t1 | MTR_8g006090 | 36.545 | 301 | 166 | 5 | 92 | 392 | 3 | 278 | 8.58e-49 | 167 |
| MS.gene27274.t1 | MTR_3g019050 | 31.073 | 354 | 226 | 3 | 21 | 373 | 18 | 354 | 2.51e-48 | 169 |
| MS.gene27274.t1 | MTR_3g072530 | 33.663 | 303 | 144 | 4 | 18 | 279 | 11 | 297 | 6.98e-48 | 165 |
| MS.gene27274.t1 | MTR_4g094360 | 31.532 | 333 | 216 | 2 | 24 | 356 | 17 | 337 | 2.13e-47 | 166 |
| MS.gene27274.t1 | MTR_1g074160 | 35.094 | 265 | 154 | 4 | 18 | 281 | 10 | 257 | 2.90e-47 | 162 |
| MS.gene27274.t1 | MTR_5g069040 | 28.723 | 376 | 256 | 3 | 21 | 395 | 18 | 382 | 6.22e-47 | 165 |
| MS.gene27274.t1 | MTR_5g034930 | 30.514 | 331 | 213 | 5 | 26 | 355 | 11 | 325 | 2.18e-46 | 162 |
| MS.gene27274.t1 | MTR_4g094352 | 31.746 | 378 | 241 | 4 | 24 | 395 | 15 | 381 | 2.23e-46 | 163 |
| MS.gene27274.t1 | MTR_8g006090 | 36.774 | 310 | 180 | 5 | 24 | 332 | 14 | 308 | 3.33e-46 | 161 |
| MS.gene27274.t1 | MTR_8g092650 | 35.249 | 261 | 158 | 2 | 96 | 355 | 2 | 252 | 2.41e-45 | 157 |
| MS.gene27274.t1 | MTR_4g094340 | 29.679 | 374 | 224 | 8 | 15 | 375 | 3 | 350 | 9.84e-43 | 153 |
| MS.gene27274.t1 | MTR_0103s0090 | 31.548 | 336 | 204 | 5 | 25 | 355 | 15 | 329 | 1.13e-42 | 153 |
| MS.gene27274.t1 | MTR_4g094340 | 29.679 | 374 | 224 | 8 | 15 | 375 | 21 | 368 | 1.60e-42 | 153 |
| MS.gene27274.t1 | MTR_4g100840 | 31.195 | 343 | 206 | 10 | 25 | 357 | 18 | 340 | 8.75e-42 | 150 |
| MS.gene27274.t1 | MTR_5g034970 | 30.117 | 342 | 209 | 5 | 16 | 356 | 2 | 314 | 1.13e-41 | 150 |
| MS.gene27274.t1 | MTR_4g129650 | 31.228 | 285 | 159 | 8 | 118 | 395 | 1 | 255 | 5.20e-41 | 146 |
| MS.gene27274.t1 | MTR_5g089390 | 27.576 | 330 | 219 | 2 | 25 | 354 | 18 | 327 | 1.78e-39 | 144 |
| MS.gene27274.t1 | MTR_5g012650 | 30.792 | 341 | 215 | 8 | 18 | 354 | 5 | 328 | 5.98e-39 | 143 |
| MS.gene27274.t1 | MTR_3g072500 | 33.953 | 215 | 129 | 2 | 18 | 232 | 17 | 218 | 2.82e-38 | 137 |
| MS.gene27274.t1 | MTR_3g095440 | 31.855 | 248 | 156 | 3 | 23 | 268 | 7 | 243 | 6.49e-38 | 137 |
| MS.gene27274.t1 | MTR_6g007743 | 29.968 | 317 | 200 | 6 | 41 | 355 | 32 | 328 | 7.22e-38 | 140 |
| MS.gene27274.t1 | MTR_4g094360 | 32.171 | 258 | 163 | 2 | 99 | 356 | 45 | 290 | 7.38e-38 | 140 |
| MS.gene27274.t1 | MTR_4g094340 | 31.930 | 285 | 164 | 4 | 100 | 375 | 21 | 284 | 3.73e-37 | 136 |
| MS.gene27274.t1 | MTR_6g007750 | 28.704 | 324 | 198 | 7 | 41 | 355 | 32 | 331 | 9.94e-37 | 137 |
| MS.gene27274.t1 | MTR_4g094360 | 29.126 | 309 | 207 | 2 | 24 | 332 | 17 | 313 | 1.13e-36 | 135 |
| MS.gene27274.t1 | MTR_1g051120 | 30.837 | 227 | 140 | 3 | 9 | 233 | 2 | 213 | 1.90e-34 | 127 |
| MS.gene27274.t1 | MTR_6g007747 | 29.859 | 355 | 224 | 6 | 41 | 395 | 32 | 361 | 5.42e-34 | 130 |
| MS.gene27274.t1 | MTR_6g007753 | 28.657 | 335 | 212 | 6 | 64 | 395 | 337 | 647 | 6.26e-34 | 133 |
| MS.gene27274.t1 | MTR_6g007753 | 25.758 | 264 | 173 | 3 | 132 | 395 | 83 | 323 | 1.13e-19 | 91.3 |
| MS.gene27274.t1 | MTR_0103s0090 | 31.621 | 253 | 151 | 2 | 106 | 355 | 5 | 238 | 7.51e-34 | 127 |
| MS.gene27274.t1 | MTR_1g051120 | 31.250 | 224 | 137 | 3 | 9 | 230 | 2 | 210 | 8.18e-34 | 127 |
| MS.gene27274.t1 | MTR_6g007757 | 30.321 | 343 | 217 | 6 | 41 | 380 | 32 | 355 | 2.78e-32 | 125 |
| MS.gene27274.t1 | MTR_6g007760 | 26.885 | 305 | 198 | 5 | 35 | 334 | 25 | 309 | 8.87e-32 | 122 |
| MS.gene27274.t1 | MTR_1g052205 | 30.472 | 233 | 135 | 4 | 134 | 362 | 13 | 222 | 1.35e-30 | 118 |
| MS.gene27274.t1 | MTR_6g007740 | 28.144 | 334 | 218 | 7 | 24 | 355 | 15 | 328 | 2.00e-30 | 122 |
| MS.gene27274.t1 | MTR_5g034980 | 29.457 | 258 | 165 | 5 | 26 | 282 | 12 | 253 | 9.45e-29 | 114 |
| MS.gene27274.t1 | MTR_8g006090 | 35.600 | 250 | 145 | 5 | 24 | 272 | 14 | 248 | 5.25e-27 | 109 |
| MS.gene27274.t1 | MTR_2g102340 | 28.244 | 262 | 163 | 4 | 26 | 282 | 43 | 284 | 3.42e-24 | 102 |
| MS.gene27274.t1 | MTR_6g007757 | 29.437 | 231 | 142 | 5 | 41 | 269 | 32 | 243 | 1.63e-20 | 90.9 |
| MS.gene27274.t1 | MTR_4g094342 | 27.948 | 229 | 143 | 3 | 10 | 232 | 2 | 214 | 2.58e-19 | 87.0 |
| MS.gene27274.t1 | MTR_4g094340 | 26.415 | 265 | 160 | 6 | 15 | 268 | 3 | 243 | 2.10e-18 | 84.7 |
| MS.gene27274.t1 | MTR_4g094340 | 26.415 | 265 | 160 | 6 | 15 | 268 | 21 | 261 | 3.59e-18 | 84.3 |
| MS.gene27274.t1 | MTR_8g006090 | 37.017 | 181 | 99 | 4 | 92 | 272 | 3 | 168 | 5.60e-18 | 82.4 |
| MS.gene27274.t1 | MTR_1g014790 | 35.821 | 134 | 65 | 3 | 100 | 229 | 42 | 158 | 2.12e-16 | 77.8 |
| MS.gene27274.t1 | MTR_1g068720 | 32.090 | 134 | 88 | 3 | 226 | 356 | 92 | 225 | 2.65e-14 | 72.4 |
| MS.gene27274.t1 | MTR_4g094348 | 37.121 | 132 | 77 | 1 | 106 | 237 | 7 | 132 | 1.00e-13 | 69.3 |
| MS.gene27274.t1 | MTR_4g094340 | 26.860 | 242 | 135 | 7 | 6 | 229 | 5 | 222 | 6.24e-13 | 68.2 |
| MS.gene27274.t1 | MTR_8g076800 | 29.921 | 127 | 82 | 2 | 206 | 326 | 146 | 271 | 8.46e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27274.t1 | AT1G75500 | 74.687 | 399 | 87 | 7 | 1 | 395 | 1 | 389 | 0.0 | 589 |
| MS.gene27274.t1 | AT1G75500 | 74.687 | 399 | 87 | 7 | 1 | 395 | 1 | 389 | 0.0 | 589 |
| MS.gene27274.t1 | AT3G53210 | 52.632 | 380 | 161 | 3 | 16 | 390 | 4 | 369 | 6.26e-142 | 409 |
| MS.gene27274.t1 | AT3G18200 | 56.131 | 367 | 144 | 2 | 16 | 382 | 29 | 378 | 3.95e-141 | 407 |
| MS.gene27274.t1 | AT3G53210 | 57.143 | 266 | 100 | 2 | 16 | 281 | 4 | 255 | 1.79e-105 | 312 |
| MS.gene27274.t1 | AT3G53210 | 50.333 | 300 | 130 | 3 | 96 | 390 | 27 | 312 | 4.72e-102 | 305 |
| MS.gene27274.t1 | AT3G18200 | 50.943 | 265 | 113 | 2 | 118 | 382 | 1 | 248 | 1.03e-85 | 261 |
| MS.gene27274.t1 | AT3G45870 | 42.169 | 332 | 187 | 3 | 18 | 349 | 8 | 334 | 1.39e-77 | 245 |
| MS.gene27274.t1 | AT4G30420 | 37.371 | 388 | 217 | 7 | 18 | 395 | 5 | 376 | 2.46e-77 | 244 |
| MS.gene27274.t1 | AT5G45370 | 37.326 | 359 | 222 | 3 | 18 | 375 | 16 | 372 | 2.50e-77 | 244 |
| MS.gene27274.t1 | AT5G45370 | 37.326 | 359 | 222 | 3 | 18 | 375 | 16 | 372 | 2.50e-77 | 244 |
| MS.gene27274.t1 | AT5G45370 | 37.709 | 358 | 198 | 3 | 18 | 375 | 16 | 348 | 6.94e-77 | 242 |
| MS.gene27274.t1 | AT4G30420 | 36.911 | 382 | 215 | 6 | 24 | 395 | 1 | 366 | 9.85e-77 | 242 |
| MS.gene27274.t1 | AT5G07050 | 38.136 | 354 | 196 | 3 | 23 | 368 | 19 | 357 | 2.35e-74 | 237 |
| MS.gene27274.t1 | AT2G39510 | 37.838 | 333 | 191 | 2 | 24 | 355 | 10 | 327 | 7.25e-73 | 232 |
| MS.gene27274.t1 | AT3G45870 | 41.587 | 315 | 179 | 3 | 18 | 332 | 8 | 317 | 1.73e-71 | 227 |
| MS.gene27274.t1 | AT1G09380 | 38.602 | 329 | 191 | 1 | 24 | 352 | 10 | 327 | 2.97e-71 | 228 |
| MS.gene27274.t1 | AT4G08290 | 35.733 | 375 | 228 | 2 | 18 | 392 | 9 | 370 | 3.31e-71 | 228 |
| MS.gene27274.t1 | AT1G21890 | 34.262 | 359 | 230 | 1 | 23 | 381 | 12 | 364 | 5.53e-71 | 228 |
| MS.gene27274.t1 | AT1G44800 | 34.188 | 351 | 210 | 2 | 18 | 362 | 7 | 342 | 8.00e-71 | 227 |
| MS.gene27274.t1 | AT4G08300 | 34.384 | 349 | 215 | 3 | 18 | 365 | 7 | 342 | 2.46e-70 | 226 |
| MS.gene27274.t1 | AT4G19185 | 39.169 | 337 | 198 | 4 | 23 | 356 | 22 | 354 | 6.29e-70 | 225 |
| MS.gene27274.t1 | AT3G30340 | 33.828 | 337 | 209 | 3 | 26 | 362 | 15 | 337 | 2.56e-68 | 220 |
| MS.gene27274.t1 | AT2G40900 | 36.522 | 345 | 199 | 3 | 12 | 356 | 1 | 325 | 2.80e-68 | 221 |
| MS.gene27274.t1 | AT2G37460 | 35.674 | 356 | 205 | 6 | 18 | 369 | 11 | 346 | 3.53e-66 | 215 |
| MS.gene27274.t1 | AT1G43650 | 33.144 | 353 | 216 | 2 | 23 | 373 | 8 | 342 | 5.16e-63 | 206 |
| MS.gene27274.t1 | AT5G13670 | 33.628 | 339 | 211 | 3 | 18 | 355 | 4 | 329 | 3.39e-62 | 205 |
| MS.gene27274.t1 | AT4G01440 | 35.294 | 323 | 194 | 3 | 41 | 363 | 29 | 336 | 2.63e-61 | 202 |
| MS.gene27274.t1 | AT4G01430 | 33.934 | 333 | 205 | 4 | 24 | 354 | 11 | 330 | 1.48e-60 | 200 |
| MS.gene27274.t1 | AT1G01070 | 33.626 | 342 | 212 | 3 | 16 | 356 | 10 | 337 | 7.85e-60 | 198 |
| MS.gene27274.t1 | AT1G11450 | 35.030 | 334 | 200 | 4 | 24 | 356 | 18 | 335 | 1.13e-59 | 197 |
| MS.gene27274.t1 | AT3G45870 | 42.264 | 265 | 148 | 3 | 18 | 282 | 8 | 267 | 2.29e-59 | 194 |
| MS.gene27274.t1 | AT1G21890 | 35.161 | 310 | 195 | 1 | 23 | 332 | 12 | 315 | 3.94e-59 | 196 |
| MS.gene27274.t1 | AT3G56620 | 33.721 | 344 | 203 | 3 | 12 | 352 | 1 | 322 | 3.47e-58 | 194 |
| MS.gene27274.t1 | AT4G01440 | 35.959 | 292 | 172 | 3 | 41 | 332 | 29 | 305 | 7.50e-56 | 186 |
| MS.gene27274.t1 | AT1G11450 | 36.156 | 307 | 179 | 4 | 51 | 356 | 1 | 291 | 1.29e-55 | 186 |
| MS.gene27274.t1 | AT5G64700 | 31.686 | 344 | 227 | 3 | 29 | 372 | 15 | 350 | 1.21e-54 | 184 |
| MS.gene27274.t1 | AT1G11460 | 33.234 | 334 | 207 | 3 | 24 | 356 | 18 | 336 | 3.35e-54 | 182 |
| MS.gene27274.t1 | AT1G11450 | 36.577 | 298 | 172 | 4 | 60 | 356 | 3 | 284 | 3.59e-54 | 181 |
| MS.gene27274.t1 | AT4G28040 | 31.471 | 340 | 203 | 5 | 18 | 354 | 4 | 316 | 1.62e-53 | 181 |
| MS.gene27274.t1 | AT4G28040 | 31.471 | 340 | 203 | 5 | 18 | 354 | 4 | 316 | 1.62e-53 | 181 |
| MS.gene27274.t1 | AT4G28040 | 31.471 | 340 | 203 | 5 | 18 | 354 | 4 | 316 | 1.62e-53 | 181 |
| MS.gene27274.t1 | AT4G28040 | 31.471 | 340 | 203 | 5 | 18 | 354 | 4 | 316 | 1.62e-53 | 181 |
| MS.gene27274.t1 | AT4G28040 | 31.471 | 340 | 203 | 5 | 18 | 354 | 4 | 316 | 1.62e-53 | 181 |
| MS.gene27274.t1 | AT4G01430 | 33.119 | 311 | 193 | 4 | 24 | 332 | 11 | 308 | 7.92e-52 | 176 |
| MS.gene27274.t1 | AT1G11450 | 34.194 | 310 | 187 | 4 | 24 | 332 | 18 | 311 | 8.32e-51 | 173 |
| MS.gene27274.t1 | AT4G19185 | 36.604 | 265 | 161 | 4 | 95 | 356 | 16 | 276 | 3.46e-50 | 172 |
| MS.gene27274.t1 | AT2G37450 | 33.140 | 344 | 185 | 8 | 24 | 363 | 11 | 313 | 5.16e-50 | 172 |
| MS.gene27274.t1 | AT5G45370 | 34.926 | 272 | 174 | 3 | 105 | 375 | 1 | 270 | 2.04e-49 | 168 |
| MS.gene27274.t1 | AT5G45370 | 34.926 | 272 | 174 | 3 | 105 | 375 | 1 | 270 | 2.04e-49 | 168 |
| MS.gene27274.t1 | AT1G25270 | 32.934 | 334 | 209 | 2 | 24 | 356 | 5 | 324 | 7.49e-49 | 169 |
| MS.gene27274.t1 | AT1G68170 | 30.607 | 379 | 243 | 4 | 14 | 391 | 5 | 364 | 3.10e-48 | 168 |
| MS.gene27274.t1 | AT1G01070 | 33.793 | 290 | 177 | 3 | 68 | 356 | 15 | 290 | 3.36e-48 | 166 |
| MS.gene27274.t1 | AT4G08290 | 36.604 | 265 | 153 | 3 | 18 | 281 | 9 | 259 | 5.09e-48 | 165 |
| MS.gene27274.t1 | AT1G68170 | 31.250 | 368 | 233 | 4 | 25 | 391 | 6 | 354 | 1.80e-47 | 166 |
| MS.gene27274.t1 | AT5G40210 | 31.953 | 338 | 189 | 10 | 25 | 357 | 16 | 317 | 5.72e-47 | 164 |
| MS.gene27274.t1 | AT3G28130 | 32.653 | 343 | 202 | 10 | 22 | 356 | 13 | 334 | 5.82e-47 | 164 |
| MS.gene27274.t1 | AT4G01450 | 35.238 | 315 | 183 | 2 | 41 | 354 | 29 | 323 | 9.98e-47 | 164 |
| MS.gene27274.t1 | AT3G30340 | 32.685 | 257 | 159 | 3 | 26 | 282 | 15 | 257 | 1.08e-45 | 159 |
| MS.gene27274.t1 | AT1G11450 | 36.822 | 258 | 146 | 4 | 100 | 356 | 2 | 243 | 3.97e-45 | 157 |
| MS.gene27274.t1 | AT4G01450 | 34.471 | 293 | 171 | 2 | 41 | 332 | 29 | 301 | 4.97e-45 | 159 |
| MS.gene27274.t1 | AT5G40240 | 28.846 | 364 | 233 | 4 | 1 | 357 | 13 | 357 | 9.00e-45 | 159 |
| MS.gene27274.t1 | AT5G40240 | 30.000 | 340 | 212 | 4 | 25 | 357 | 23 | 343 | 1.01e-44 | 159 |
| MS.gene27274.t1 | AT5G40240 | 30.000 | 340 | 212 | 4 | 25 | 357 | 23 | 343 | 1.01e-44 | 159 |
| MS.gene27274.t1 | AT3G28050 | 31.267 | 371 | 223 | 10 | 25 | 387 | 15 | 361 | 1.17e-44 | 158 |
| MS.gene27274.t1 | AT4G01440 | 36.777 | 242 | 138 | 3 | 41 | 282 | 29 | 255 | 3.99e-44 | 154 |
| MS.gene27274.t1 | AT3G28100 | 30.286 | 350 | 219 | 8 | 25 | 370 | 17 | 345 | 1.16e-43 | 155 |
| MS.gene27274.t1 | AT5G40230 | 29.223 | 373 | 223 | 7 | 25 | 384 | 24 | 368 | 1.75e-43 | 155 |
| MS.gene27274.t1 | AT3G28130 | 33.594 | 256 | 149 | 6 | 105 | 356 | 10 | 248 | 2.36e-42 | 149 |
| MS.gene27274.t1 | AT3G28130 | 33.594 | 256 | 149 | 6 | 105 | 356 | 10 | 248 | 2.36e-42 | 149 |
| MS.gene27274.t1 | AT1G70260 | 29.462 | 353 | 233 | 5 | 24 | 370 | 14 | 356 | 7.99e-41 | 148 |
| MS.gene27274.t1 | AT3G28080 | 30.473 | 338 | 210 | 6 | 25 | 356 | 17 | 335 | 9.76e-41 | 148 |
| MS.gene27274.t1 | AT3G28070 | 29.740 | 269 | 168 | 5 | 105 | 371 | 8 | 257 | 2.49e-40 | 144 |
| MS.gene27274.t1 | AT3G28080 | 31.621 | 253 | 158 | 3 | 105 | 356 | 8 | 246 | 4.41e-40 | 144 |
| MS.gene27274.t1 | AT3G28080 | 31.621 | 253 | 158 | 3 | 105 | 356 | 8 | 246 | 4.41e-40 | 144 |
| MS.gene27274.t1 | AT3G28080 | 31.621 | 253 | 158 | 3 | 105 | 356 | 8 | 246 | 4.41e-40 | 144 |
| MS.gene27274.t1 | AT3G28080 | 31.621 | 253 | 158 | 3 | 105 | 356 | 8 | 246 | 4.41e-40 | 144 |
| MS.gene27274.t1 | AT3G45870 | 38.426 | 216 | 128 | 3 | 134 | 349 | 49 | 259 | 1.87e-39 | 143 |
| MS.gene27274.t1 | AT3G28070 | 29.740 | 269 | 168 | 5 | 105 | 371 | 100 | 349 | 2.58e-39 | 144 |
| MS.gene27274.t1 | AT3G28080 | 31.621 | 253 | 158 | 3 | 105 | 356 | 89 | 327 | 2.68e-39 | 144 |
| MS.gene27274.t1 | AT4G01450 | 34.156 | 243 | 139 | 2 | 41 | 282 | 29 | 251 | 2.61e-38 | 139 |
| MS.gene27274.t1 | AT4G01440 | 32.365 | 241 | 148 | 3 | 123 | 363 | 3 | 228 | 3.84e-38 | 138 |
| MS.gene27274.t1 | AT4G01440 | 32.365 | 241 | 148 | 3 | 123 | 363 | 3 | 228 | 3.84e-38 | 138 |
| MS.gene27274.t1 | AT5G47470 | 27.920 | 351 | 225 | 7 | 9 | 354 | 17 | 344 | 2.55e-37 | 139 |
| MS.gene27274.t1 | AT5G47470 | 27.920 | 351 | 225 | 7 | 9 | 354 | 45 | 372 | 3.27e-37 | 139 |
| MS.gene27274.t1 | AT5G47470 | 27.920 | 351 | 225 | 7 | 9 | 354 | 45 | 372 | 4.17e-37 | 139 |
| MS.gene27274.t1 | AT2G37450 | 34.100 | 261 | 148 | 6 | 107 | 363 | 1 | 241 | 5.85e-37 | 135 |
| MS.gene27274.t1 | AT5G45370 | 32.780 | 241 | 159 | 3 | 136 | 375 | 74 | 312 | 8.58e-37 | 136 |
| MS.gene27274.t1 | AT1G43650 | 31.274 | 259 | 160 | 1 | 23 | 281 | 8 | 248 | 9.23e-36 | 132 |
| MS.gene27274.t1 | AT4G15540 | 28.011 | 357 | 224 | 5 | 25 | 380 | 20 | 344 | 1.75e-34 | 130 |
| MS.gene27274.t1 | AT4G15540 | 28.011 | 357 | 224 | 5 | 25 | 380 | 20 | 344 | 1.75e-34 | 130 |
| MS.gene27274.t1 | AT4G16620 | 27.966 | 354 | 230 | 6 | 30 | 375 | 20 | 356 | 8.40e-34 | 129 |
| MS.gene27274.t1 | AT3G45870 | 37.186 | 199 | 120 | 3 | 134 | 332 | 49 | 242 | 1.38e-33 | 126 |
| MS.gene27274.t1 | AT3G45870 | 37.186 | 199 | 120 | 3 | 134 | 332 | 49 | 242 | 1.38e-33 | 126 |
| MS.gene27274.t1 | AT4G01450 | 35.071 | 211 | 116 | 2 | 41 | 250 | 29 | 219 | 4.07e-33 | 124 |
| MS.gene27274.t1 | AT5G64700 | 32.500 | 240 | 154 | 3 | 29 | 268 | 15 | 246 | 3.02e-32 | 122 |
| MS.gene27274.t1 | AT3G45870 | 37.234 | 188 | 113 | 3 | 162 | 349 | 1 | 183 | 1.21e-30 | 117 |
| MS.gene27274.t1 | AT1G60050 | 27.554 | 323 | 221 | 3 | 38 | 356 | 29 | 342 | 1.26e-30 | 121 |
| MS.gene27274.t1 | AT3G28130 | 30.973 | 226 | 135 | 6 | 135 | 356 | 1 | 209 | 3.56e-30 | 116 |
| MS.gene27274.t1 | AT3G28070 | 28.261 | 230 | 148 | 4 | 105 | 332 | 100 | 314 | 6.65e-29 | 115 |
| MS.gene27274.t1 | AT4G01430 | 31.220 | 205 | 127 | 3 | 151 | 354 | 2 | 193 | 1.58e-28 | 112 |
| MS.gene27274.t1 | AT3G28070 | 26.778 | 239 | 154 | 5 | 135 | 371 | 1 | 220 | 1.28e-27 | 109 |
| MS.gene27274.t1 | AT3G28080 | 28.251 | 223 | 145 | 3 | 135 | 356 | 1 | 209 | 1.61e-27 | 109 |
| MS.gene27274.t1 | AT2G37450 | 32.479 | 234 | 134 | 6 | 134 | 363 | 61 | 274 | 6.32e-27 | 109 |
| MS.gene27274.t1 | AT4G24980 | 28.302 | 318 | 147 | 8 | 38 | 355 | 3 | 239 | 8.62e-26 | 105 |
| MS.gene27274.t1 | AT3G28130 | 31.783 | 258 | 148 | 9 | 22 | 271 | 13 | 250 | 2.17e-24 | 101 |
| MS.gene27274.t1 | AT3G28100 | 31.076 | 251 | 153 | 6 | 25 | 271 | 17 | 251 | 9.92e-24 | 99.8 |
| MS.gene27274.t1 | AT4G16620 | 27.536 | 276 | 176 | 5 | 107 | 375 | 1 | 259 | 1.69e-23 | 99.0 |
| MS.gene27274.t1 | AT4G16620 | 27.536 | 276 | 176 | 5 | 107 | 375 | 1 | 259 | 1.69e-23 | 99.0 |
| MS.gene27274.t1 | AT3G45870 | 36.913 | 149 | 89 | 3 | 134 | 282 | 49 | 192 | 1.92e-21 | 92.0 |
| MS.gene27274.t1 | AT3G45870 | 36.735 | 147 | 88 | 3 | 136 | 282 | 4 | 145 | 2.00e-21 | 90.5 |
| MS.gene27274.t1 | AT3G28100 | 37.342 | 158 | 95 | 3 | 25 | 180 | 17 | 172 | 4.30e-21 | 92.0 |
| MS.gene27274.t1 | AT3G28130 | 36.943 | 157 | 91 | 4 | 22 | 174 | 13 | 165 | 2.08e-20 | 89.4 |
| MS.gene27274.t1 | AT4G16620 | 29.279 | 222 | 139 | 4 | 30 | 250 | 20 | 224 | 5.73e-20 | 89.4 |
| MS.gene27274.t1 | AT3G28080 | 36.025 | 161 | 93 | 3 | 25 | 180 | 17 | 172 | 7.90e-17 | 80.9 |
| MS.gene27274.t1 | AT3G28080 | 33.784 | 74 | 48 | 1 | 283 | 356 | 209 | 281 | 8.79e-11 | 62.8 |
| MS.gene27274.t1 | AT3G28080 | 46.053 | 76 | 41 | 0 | 105 | 180 | 8 | 83 | 4.86e-16 | 77.0 |
| MS.gene27274.t1 | AT3G28080 | 33.784 | 74 | 48 | 1 | 283 | 356 | 120 | 192 | 5.11e-11 | 62.4 |
Find 77 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACACCAATGATTGATTT+TGG | 0.075897 | 1.1:+1493849 | MS.gene27274:CDS |
| CTTGGATGTCTTTATCTAAT+TGG | 0.160867 | 1.1:+1493912 | MS.gene27274:CDS |
| TCTTCCATTTGCTTATTTCT+TGG | 0.199338 | 1.1:+1492738 | MS.gene27274:CDS |
| TATTCTACAATGGCTGATTT+AGG | 0.205011 | 1.1:+1492535 | None:intergenic |
| ACTTCCTATACATGTTTCTT+TGG | 0.256420 | 1.1:+1494011 | MS.gene27274:CDS |
| ATCAGTGATTACATTATATC+AGG | 0.276969 | 1.1:+1493761 | MS.gene27274:CDS |
| TTGCATTTGCAGTACAAATA+TGG | 0.283549 | 1.1:+1494236 | MS.gene27274:CDS |
| GCAATTTCTTCTTATTGCTT+TGG | 0.291149 | 1.1:+1494040 | MS.gene27274:CDS |
| ATCATGGCTTCTATTGCTTT+AGG | 0.322920 | 1.1:+1494325 | MS.gene27274:CDS |
| GATGCTTTAGCGTGGCTTGC+GGG | 0.332227 | 1.1:-1494984 | None:intergenic |
| CAGAGGAAGTTTAAATTAAT+CGG | 0.338959 | 1.1:-1493208 | None:intergenic |
| CTAACTAACCGCGTATAAAA+TGG | 0.340348 | 1.1:-1494117 | None:intergenic |
| CCTTTATATTACAGGATCAT+TGG | 0.349819 | 1.1:+1494846 | MS.gene27274:intron |
| CCACTATTTAAGTGACTACT+TGG | 0.366846 | 1.1:-1493807 | None:intergenic |
| ATCAAGGTTTCTACTTGCTT+GGG | 0.374867 | 1.1:+1493491 | MS.gene27274:CDS |
| AATCAAGGTTTCTACTTGCT+TGG | 0.382223 | 1.1:+1493490 | MS.gene27274:CDS |
| ATTGTTTGTCTTGGTCTGCT+TGG | 0.391168 | 1.1:+1493937 | MS.gene27274:CDS |
| TTGCAGGGAGTGGTGGCATC+TGG | 0.399814 | 1.1:+1494211 | MS.gene27274:intron |
| GCCCTGCAGTTTGGTTATGC+TGG | 0.404103 | 1.1:+1492625 | MS.gene27274:CDS |
| TAATTGGACATTGTTTGTCT+TGG | 0.407693 | 1.1:+1493928 | MS.gene27274:CDS |
| GCCATGTTGGCCCTGCAGTT+TGG | 0.410120 | 1.1:+1492616 | MS.gene27274:CDS |
| GCTACAACAAAAGTTTGAAC+AGG | 0.438205 | 1.1:-1494301 | None:intergenic |
| AACAGGATTACAGCAAATCA+AGG | 0.453990 | 1.1:+1493475 | MS.gene27274:intron |
| GCAATGATGTTCCTATAGAC+AGG | 0.454821 | 1.1:-1492703 | None:intergenic |
| TTGAAAGAAATGCTCAGGCT+TGG | 0.458050 | 1.1:+1494066 | MS.gene27274:CDS |
| GGACTTGGACTATATATAGT+TGG | 0.461139 | 1.1:-1493786 | None:intergenic |
| CCCTGCCATTACATTTCTCA+TGG | 0.470693 | 1.1:+1493561 | MS.gene27274:CDS |
| CCAAGTAGTCACTTAAATAG+TGG | 0.472865 | 1.1:+1493807 | MS.gene27274:CDS |
| ATTGTCCCAAAATCAATCAT+TGG | 0.475219 | 1.1:-1493855 | None:intergenic |
| TTCAAGAGCTGCACTTAACA+TGG | 0.475828 | 1.1:+1492660 | MS.gene27274:CDS |
| AAGTCCAAAGAAACATGTAT+AGG | 0.477885 | 1.1:-1494015 | None:intergenic |
| CAAATATGGTGCATTGATAG+AGG | 0.486474 | 1.1:+1494250 | MS.gene27274:CDS |
| GACGAGCAGGATACTTCTTA+AGG | 0.487109 | 1.1:-1493980 | None:intergenic |
| GATGGAATTGCTAAAGTAGC+AGG | 0.489379 | 1.1:+1493714 | MS.gene27274:CDS |
| TTTAAGTGACTACTTGGACT+TGG | 0.498895 | 1.1:-1493801 | None:intergenic |
| AGAAATAAGCAAATGGAAGA+AGG | 0.501047 | 1.1:-1492735 | None:intergenic |
| TGGACTATACTTTGTGCTGT+GGG | 0.502383 | 1.1:+1494887 | MS.gene27274:CDS |
| TTCTCATGGCAGTCATACTA+AGG | 0.503575 | 1.1:+1493575 | MS.gene27274:CDS |
| TTTAGGAGAAGAGTTCTACT+TGG | 0.503735 | 1.1:+1494342 | MS.gene27274:CDS |
| GCCATGAGAAATGTAATGGC+AGG | 0.506658 | 1.1:-1493562 | None:intergenic |
| AGGTTTCTACTTGCTTGGGT+TGG | 0.514004 | 1.1:+1493495 | MS.gene27274:CDS |
| AACCAGCATAACCAAACTGC+AGG | 0.522465 | 1.1:-1492627 | None:intergenic |
| GAGAAGAGTTCTACTTGGGC+GGG | 0.532422 | 1.1:+1494347 | MS.gene27274:CDS |
| ATGTCACTTGGTGATGCAAA+GGG | 0.532729 | 1.1:+1493876 | MS.gene27274:CDS |
| GTGAGATTGAATCGAAAGGA+TGG | 0.534056 | 1.1:+1493696 | MS.gene27274:CDS |
| TGTATTGCTGATGCAAAGGT+AGG | 0.537203 | 1.1:-1493529 | None:intergenic |
| CTGGACTATACTTTGTGCTG+TGG | 0.541801 | 1.1:+1494886 | MS.gene27274:CDS |
| GAAGTGACAGAAAGACGAGC+AGG | 0.543364 | 1.1:-1493993 | None:intergenic |
| TGATACACTGCAACAAACAC+TGG | 0.547318 | 1.1:-1494277 | None:intergenic |
| TATTAATTTGCAGGGAGTGG+TGG | 0.551473 | 1.1:+1494204 | MS.gene27274:intron |
| GTATTGCTGATGCAAAGGTA+GGG | 0.556287 | 1.1:-1493528 | None:intergenic |
| TTAGGAGAAGAGTTCTACTT+GGG | 0.557775 | 1.1:+1494343 | MS.gene27274:CDS |
| GCAGGATACTTCTTAAGGAC+AGG | 0.559573 | 1.1:-1493975 | None:intergenic |
| AGAGAAGAAATTATTTGCAA+AGG | 0.564376 | 1.1:+1494920 | MS.gene27274:CDS |
| TAAAGCAATAGAAGCCATGA+TGG | 0.564411 | 1.1:-1494323 | None:intergenic |
| TCAGCTGCATGTGGCCATGT+TGG | 0.564609 | 1.1:+1492603 | MS.gene27274:CDS |
| ACCAAACTGCAGGGCCAACA+TGG | 0.565314 | 1.1:-1492617 | None:intergenic |
| CAGCTTCTTCTAAGAGAATG+TGG | 0.569037 | 1.1:+1492560 | MS.gene27274:CDS |
| AATGTCACTTGGTGATGCAA+AGG | 0.570694 | 1.1:+1493875 | MS.gene27274:CDS |
| GGTGCAGTGTTGATAGTAGC+TGG | 0.570883 | 1.1:+1494867 | MS.gene27274:CDS |
| TCTGTTGAAGAAGATAGGAA+TGG | 0.578628 | 1.1:-1495017 | None:intergenic |
| TCAGTGATTACATTATATCA+GGG | 0.580478 | 1.1:+1493762 | MS.gene27274:CDS |
| TGATGCTTTAGCGTGGCTTG+CGG | 0.596033 | 1.1:-1494985 | None:intergenic |
| CAATGATGTTCCTATAGACA+GGG | 0.596068 | 1.1:-1492702 | None:intergenic |
| GACTGCCATGAGAAATGTAA+TGG | 0.601131 | 1.1:-1493566 | None:intergenic |
| GTTCTGTATTGCTGATGCAA+AGG | 0.604446 | 1.1:-1493533 | None:intergenic |
| GGAGAAGAGTTCTACTTGGG+CGG | 0.607421 | 1.1:+1494346 | MS.gene27274:CDS |
| GTGCAGCTCTTGAAACAACA+TGG | 0.618096 | 1.1:-1492651 | None:intergenic |
| AGGAAGTTTAAATTAATCGG+TGG | 0.623492 | 1.1:-1493205 | None:intergenic |
| GCAAGTGAGATTGAATCGAA+AGG | 0.625916 | 1.1:+1493692 | MS.gene27274:CDS |
| TCAAGAGCTGCACTTAACAT+GGG | 0.631283 | 1.1:+1492661 | MS.gene27274:CDS |
| CCATGAGAAATGTAATGGCA+GGG | 0.635566 | 1.1:-1493561 | None:intergenic |
| TATTGCTGATGCAAAGGTAG+GGG | 0.668908 | 1.1:-1493527 | None:intergenic |
| ATATGGTGCATTGATAGAGG+AGG | 0.677817 | 1.1:+1494253 | MS.gene27274:CDS |
| ACCAGCATAACCAAACTGCA+GGG | 0.678569 | 1.1:-1492626 | None:intergenic |
| GGACTATACTTTGTGCTGTG+GGG | 0.683443 | 1.1:+1494888 | MS.gene27274:CDS |
| GAGTGAGTGATGCTTTAGCG+TGG | 0.695699 | 1.1:-1494992 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAATTTTATAAATTAA+AGG | + | chr1.1:1493348-1493367 | MS.gene27274:intron | 0.0% |
| !! | TCAACATAAAAAATTATTAA+AGG | - | chr1.1:1493451-1493470 | None:intergenic | 10.0% |
| !!! | AAAAATTATTAAAGGTATAA+AGG | - | chr1.1:1493443-1493462 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTATTAATTTGC+AGG | + | chr1.1:1494195-1494214 | MS.gene27274:intron | 10.0% |
| !!! | TTTTTTTTTATTAATTTGCA+GGG | + | chr1.1:1494196-1494215 | MS.gene27274:intron | 10.0% |
| !! | AATATTAATGAAATTGTTAG+AGG | - | chr1.1:1492780-1492799 | None:intergenic | 15.0% |
| !! | AATCCAATATAAAAAAACTT+TGG | - | chr1.1:1492845-1492864 | None:intergenic | 15.0% |
| !! | ATAATGTACAAAAATTTCAT+AGG | - | chr1.1:1492808-1492827 | None:intergenic | 15.0% |
| !! | ATGAATAAAGTAAAATCAAA+AGG | - | chr1.1:1494815-1494834 | None:intergenic | 15.0% |
| !! | TATCATAAACATTTGAATTA+AGG | - | chr1.1:1494396-1494415 | None:intergenic | 15.0% |
| !! | TGAATAAAGTAAAATCAAAA+GGG | - | chr1.1:1494814-1494833 | None:intergenic | 15.0% |
| !!! | AAATTTTGCATGAATTTTTT+TGG | - | chr1.1:1493657-1493676 | None:intergenic | 15.0% |
| !!! | AAGTTTTTGTTACTAATTTA+GGG | + | chr1.1:1494678-1494697 | MS.gene27274:intron | 15.0% |
| !!! | TTTTTTATGTTGAATTAAAC+AGG | + | chr1.1:1493458-1493477 | MS.gene27274:intron | 15.0% |
| !! | GTATTTACTAAACAACTTAT+CGG | + | chr1.1:1494554-1494573 | MS.gene27274:intron | 20.0% |
| !!! | AACAATATTTTGTGTAATTG+GGG | + | chr1.1:1493737-1493756 | MS.gene27274:CDS | 20.0% |
| !!! | AACGTGTCAATTTTTATAAA+AGG | - | chr1.1:1492960-1492979 | None:intergenic | 20.0% |
| !!! | CAACCAAAGTTTTTTTATAT+TGG | + | chr1.1:1492839-1492858 | MS.gene27274:intron | 20.0% |
| !!! | CAAGTTTTTGTTACTAATTT+AGG | + | chr1.1:1494677-1494696 | MS.gene27274:intron | 20.0% |
| !!! | GAACAATATTTTGTGTAATT+GGG | + | chr1.1:1493736-1493755 | MS.gene27274:CDS | 20.0% |
| !!! | TTTGATTGCGATTTTATTTT+TGG | + | chr1.1:1494588-1494607 | MS.gene27274:intron | 20.0% |
| ! | AATGATCCTGTAATATAAAG+GGG | - | chr1.1:1494847-1494866 | None:intergenic | 25.0% |
| ! | AGAGAAGAAATTATTTGCAA+AGG | + | chr1.1:1494920-1494939 | MS.gene27274:CDS | 25.0% |
| ! | AGTAACAAAAACTTGATCAT+AGG | - | chr1.1:1494672-1494691 | None:intergenic | 25.0% |
| ! | ATAATACCCCTTTATATTAC+AGG | + | chr1.1:1494838-1494857 | MS.gene27274:intron | 25.0% |
| ! | ATCAGTGATTACATTATATC+AGG | + | chr1.1:1493761-1493780 | MS.gene27274:CDS | 25.0% |
| ! | CAATGATCCTGTAATATAAA+GGG | - | chr1.1:1494848-1494867 | None:intergenic | 25.0% |
| ! | CAGAGGAAGTTTAAATTAAT+CGG | - | chr1.1:1493211-1493230 | None:intergenic | 25.0% |
| ! | GTAACAAAAACTTGATCATA+GGG | - | chr1.1:1494671-1494690 | None:intergenic | 25.0% |
| ! | TAATGAAATTGTTAGAGGAA+TGG | - | chr1.1:1492775-1492794 | None:intergenic | 25.0% |
| ! | TAATTTAAACCTAATAGTCG+TGG | - | chr1.1:1494143-1494162 | None:intergenic | 25.0% |
| ! | TAGGATATACTACTATTGAA+TGG | + | chr1.1:1494736-1494755 | MS.gene27274:intron | 25.0% |
| ! | TCAGTGATTACATTATATCA+GGG | + | chr1.1:1493762-1493781 | MS.gene27274:CDS | 25.0% |
| ! | TTGAAGCAAAAAATCATCAT+AGG | + | chr1.1:1494717-1494736 | MS.gene27274:intron | 25.0% |
| ! | TTGAATTAAGGATCGTAATT+AGG | - | chr1.1:1494384-1494403 | None:intergenic | 25.0% |
| !! | ATATTTAGTTCCCGTTAAAA+TGG | - | chr1.1:1492989-1493008 | None:intergenic | 25.0% |
| !! | GGAACAATATTTTGTGTAAT+TGG | + | chr1.1:1493735-1493754 | MS.gene27274:CDS | 25.0% |
| !! | TATTTAGTTCCCGTTAAAAT+GGG | - | chr1.1:1492988-1493007 | None:intergenic | 25.0% |
| !! | TTTTCCAAGAAATAAGCAAA+TGG | - | chr1.1:1492745-1492764 | None:intergenic | 25.0% |
| AAGTCCAAAGAAACATGTAT+AGG | - | chr1.1:1494018-1494037 | None:intergenic | 30.0% | |
| AATACCCTTTATCTCACTTT+AGG | - | chr1.1:1494520-1494539 | None:intergenic | 30.0% | |
| AATGACCTAAAGTGAGATAA+AGG | + | chr1.1:1494512-1494531 | MS.gene27274:intron | 30.0% | |
| ACTTCCTATACATGTTTCTT+TGG | + | chr1.1:1494011-1494030 | MS.gene27274:CDS | 30.0% | |
| AGAAATAAGCAAATGGAAGA+AGG | - | chr1.1:1492738-1492757 | None:intergenic | 30.0% | |
| AGGAAGTTTAAATTAATCGG+TGG | - | chr1.1:1493208-1493227 | None:intergenic | 30.0% | |
| ATGACCTAAAGTGAGATAAA+GGG | + | chr1.1:1494513-1494532 | MS.gene27274:intron | 30.0% | |
| ATTGTCCCAAAATCAATCAT+TGG | - | chr1.1:1493858-1493877 | None:intergenic | 30.0% | |
| CCAATGATCCTGTAATATAA+AGG | - | chr1.1:1494849-1494868 | None:intergenic | 30.0% | |
| CCTTTATATTACAGGATCAT+TGG | + | chr1.1:1494846-1494865 | MS.gene27274:intron | 30.0% | |
| CTTGGATGTCTTTATCTAAT+TGG | + | chr1.1:1493912-1493931 | MS.gene27274:CDS | 30.0% | |
| GCAATTTCTTCTTATTGCTT+TGG | + | chr1.1:1494040-1494059 | MS.gene27274:CDS | 30.0% | |
| GTATCATTACATAAGATACG+TGG | - | chr1.1:1494483-1494502 | None:intergenic | 30.0% | |
| TAAGGATCGTAATTAGGATT+AGG | - | chr1.1:1494378-1494397 | None:intergenic | 30.0% | |
| TAATTGGACATTGTTTGTCT+TGG | + | chr1.1:1493928-1493947 | MS.gene27274:CDS | 30.0% | |
| TCATGCAAAATTTCATCAAC+AGG | + | chr1.1:1493664-1493683 | MS.gene27274:intron | 30.0% | |
| TTCCTTAGCATATTCTCTTA+AGG | + | chr1.1:1492863-1492882 | MS.gene27274:intron | 30.0% | |
| TTGCATTTGCAGTACAAATA+TGG | + | chr1.1:1494236-1494255 | MS.gene27274:CDS | 30.0% | |
| ! | CATTTTCTGTTGAAGAAGAT+AGG | - | chr1.1:1495025-1495044 | None:intergenic | 30.0% |
| ! | TCTTCCATTTGCTTATTTCT+TGG | + | chr1.1:1492738-1492757 | MS.gene27274:CDS | 30.0% |
| ! | TGTTTCTTTTCCTTTTGTTC+AGG | + | chr1.1:1493173-1493192 | MS.gene27274:intron | 30.0% |
| !! | ACAACACCAATGATTGATTT+TGG | + | chr1.1:1493849-1493868 | MS.gene27274:CDS | 30.0% |
| !! | ACGTTTAGTTCCCATTTTAA+CGG | + | chr1.1:1492975-1492994 | MS.gene27274:intron | 30.0% |
| !! | CAACACCAATGATTGATTTT+GGG | + | chr1.1:1493850-1493869 | MS.gene27274:CDS | 30.0% |
| !!! | TCTTTTTTCTCGCACTTATT+GGG | + | chr1.1:1493236-1493255 | MS.gene27274:CDS | 30.0% |
| !!! | TTCTTTTTTCTCGCACTTAT+TGG | + | chr1.1:1493235-1493254 | MS.gene27274:CDS | 30.0% |
| !!! | TTTTATTAATTTGCAGGGAG+TGG | + | chr1.1:1494201-1494220 | MS.gene27274:intron | 30.0% |
| AACAGGATTACAGCAAATCA+AGG | + | chr1.1:1493475-1493494 | MS.gene27274:intron | 35.0% | |
| AAGGGAAAAAATTGGACACT+TGG | + | chr1.1:1493894-1493913 | MS.gene27274:CDS | 35.0% | |
| AATCAAGGTTTCTACTTGCT+TGG | + | chr1.1:1493490-1493509 | MS.gene27274:CDS | 35.0% | |
| ATCAAGGTTTCTACTTGCTT+GGG | + | chr1.1:1493491-1493510 | MS.gene27274:CDS | 35.0% | |
| ATCATGGCTTCTATTGCTTT+AGG | + | chr1.1:1494325-1494344 | MS.gene27274:CDS | 35.0% | |
| CAATGATGTTCCTATAGACA+GGG | - | chr1.1:1492705-1492724 | None:intergenic | 35.0% | |
| CCAAGTAGTCACTTAAATAG+TGG | + | chr1.1:1493807-1493826 | MS.gene27274:CDS | 35.0% | |
| CCACTATTTAAGTGACTACT+TGG | - | chr1.1:1493810-1493829 | None:intergenic | 35.0% | |
| CTAACTAACCGCGTATAAAA+TGG | - | chr1.1:1494120-1494139 | None:intergenic | 35.0% | |
| GCTACAACAAAAGTTTGAAC+AGG | - | chr1.1:1494304-1494323 | None:intergenic | 35.0% | |
| GGACTTGGACTATATATAGT+TGG | - | chr1.1:1493789-1493808 | None:intergenic | 35.0% | |
| GTGATGCAAAGGGAAAAAAT+TGG | + | chr1.1:1493886-1493905 | MS.gene27274:CDS | 35.0% | |
| TAAAGCAATAGAAGCCATGA+TGG | - | chr1.1:1494326-1494345 | None:intergenic | 35.0% | |
| TAAGTGCGAGAAAAAAGAAC+TGG | - | chr1.1:1493234-1493253 | None:intergenic | 35.0% | |
| TAATTGCTTTGCGAGTGTTT+AGG | - | chr1.1:1494431-1494450 | None:intergenic | 35.0% | |
| TCTGTTGAAGAAGATAGGAA+TGG | - | chr1.1:1495020-1495039 | None:intergenic | 35.0% | |
| TGAAAAATTTCAGCTGCATG+TGG | + | chr1.1:1492594-1492613 | MS.gene27274:CDS | 35.0% | |
| TGCCTTAAGAGAATATGCTA+AGG | - | chr1.1:1492868-1492887 | None:intergenic | 35.0% | |
| TTAGGAGAAGAGTTCTACTT+GGG | + | chr1.1:1494343-1494362 | MS.gene27274:CDS | 35.0% | |
| TTATGTAATGATACCGCCTT+CGG | + | chr1.1:1494489-1494508 | MS.gene27274:intron | 35.0% | |
| TTTAAGTGACTACTTGGACT+TGG | - | chr1.1:1493804-1493823 | None:intergenic | 35.0% | |
| TTTAGGAGAAGAGTTCTACT+TGG | + | chr1.1:1494342-1494361 | MS.gene27274:CDS | 35.0% | |
| ! | ACATGCAGCTGAAATTTTTC+AGG | - | chr1.1:1492595-1492614 | None:intergenic | 35.0% |
| ! | AGCTTTCACCATTTTATACG+CGG | + | chr1.1:1494109-1494128 | MS.gene27274:CDS | 35.0% |
| ! | CAAATATGGTGCATTGATAG+AGG | + | chr1.1:1494250-1494269 | MS.gene27274:CDS | 35.0% |
| ! | CATGCAGCTGAAATTTTTCA+GGG | - | chr1.1:1492594-1492613 | None:intergenic | 35.0% |
| ! | TCTTTTCCTTTTGTTCAGGA+AGG | + | chr1.1:1493177-1493196 | MS.gene27274:intron | 35.0% |
| !! | AACTTGTTTTCCCTGTCTAT+AGG | + | chr1.1:1492692-1492711 | MS.gene27274:CDS | 35.0% |
| !! | AACTTTTGTTGTAGCCATCA+TGG | + | chr1.1:1494309-1494328 | MS.gene27274:CDS | 35.0% |
| !! | CGTTTAGTTCCCATTTTAAC+GGG | + | chr1.1:1492976-1492995 | MS.gene27274:intron | 35.0% |
| !! | GGTTTTTGAAAGAAATGCTC+AGG | + | chr1.1:1494061-1494080 | MS.gene27274:CDS | 35.0% |
| ATTGTTTGTCTTGGTCTGCT+TGG | + | chr1.1:1493937-1493956 | MS.gene27274:CDS | 40.0% | |
| CCATGAGAAATGTAATGGCA+GGG | - | chr1.1:1493564-1493583 | None:intergenic | 40.0% | |
| GACTGCCATGAGAAATGTAA+TGG | - | chr1.1:1493569-1493588 | None:intergenic | 40.0% | |
| GATGGAATTGCTAAAGTAGC+AGG | + | chr1.1:1493714-1493733 | MS.gene27274:CDS | 40.0% | |
| GCAAGTGAGATTGAATCGAA+AGG | + | chr1.1:1493692-1493711 | MS.gene27274:CDS | 40.0% | |
| GCAATGATGTTCCTATAGAC+AGG | - | chr1.1:1492706-1492725 | None:intergenic | 40.0% | |
| GTATTGCTGATGCAAAGGTA+GGG | - | chr1.1:1493531-1493550 | None:intergenic | 40.0% | |
| GTGAGATTGAATCGAAAGGA+TGG | + | chr1.1:1493696-1493715 | MS.gene27274:CDS | 40.0% | |
| GTTAGTTAGCCACGACTATT+AGG | + | chr1.1:1494131-1494150 | MS.gene27274:intron | 40.0% | |
| GTTCTGTATTGCTGATGCAA+AGG | - | chr1.1:1493536-1493555 | None:intergenic | 40.0% | |
| TATTGCTGATGCAAAGGTAG+GGG | - | chr1.1:1493530-1493549 | None:intergenic | 40.0% | |
| TCAAGAGCTGCACTTAACAT+GGG | + | chr1.1:1492661-1492680 | MS.gene27274:CDS | 40.0% | |
| TGATACACTGCAACAAACAC+TGG | - | chr1.1:1494280-1494299 | None:intergenic | 40.0% | |
| TGGACTATACTTTGTGCTGT+GGG | + | chr1.1:1494887-1494906 | MS.gene27274:CDS | 40.0% | |
| TGTATTGCTGATGCAAAGGT+AGG | - | chr1.1:1493532-1493551 | None:intergenic | 40.0% | |
| TTCAAGAGCTGCACTTAACA+TGG | + | chr1.1:1492660-1492679 | MS.gene27274:CDS | 40.0% | |
| TTCTCATGGCAGTCATACTA+AGG | + | chr1.1:1493575-1493594 | MS.gene27274:CDS | 40.0% | |
| TTGAAAGAAATGCTCAGGCT+TGG | + | chr1.1:1494066-1494085 | MS.gene27274:CDS | 40.0% | |
| ! | ATATGGTGCATTGATAGAGG+AGG | + | chr1.1:1494253-1494272 | MS.gene27274:CDS | 40.0% |
| ! | CAGCTTCTTCTAAGAGAATG+TGG | + | chr1.1:1492560-1492579 | MS.gene27274:CDS | 40.0% |
| !! | AATGTCACTTGGTGATGCAA+AGG | + | chr1.1:1493875-1493894 | MS.gene27274:CDS | 40.0% |
| !! | ATGTCACTTGGTGATGCAAA+GGG | + | chr1.1:1493876-1493895 | MS.gene27274:CDS | 40.0% |
| !! | TATTAATTTGCAGGGAGTGG+TGG | + | chr1.1:1494204-1494223 | MS.gene27274:intron | 40.0% |
| !!! | GATTTTGGGACAATGTCACT+TGG | + | chr1.1:1493864-1493883 | MS.gene27274:CDS | 40.0% |
| AACCAGCATAACCAAACTGC+AGG | - | chr1.1:1492630-1492649 | None:intergenic | 45.0% | |
| ACCAGCATAACCAAACTGCA+GGG | - | chr1.1:1492629-1492648 | None:intergenic | 45.0% | |
| ACTTTAGGTCATTCCGAAGG+CGG | - | chr1.1:1494505-1494524 | None:intergenic | 45.0% | |
| AGGTTTCTACTTGCTTGGGT+TGG | + | chr1.1:1493495-1493514 | MS.gene27274:CDS | 45.0% | |
| CCCTGCCATTACATTTCTCA+TGG | + | chr1.1:1493561-1493580 | MS.gene27274:CDS | 45.0% | |
| CGAGAAAAAAGAACTGGCAG+AGG | - | chr1.1:1493228-1493247 | None:intergenic | 45.0% | |
| CTCACTTTAGGTCATTCCGA+AGG | - | chr1.1:1494508-1494527 | None:intergenic | 45.0% | |
| CTGGACTATACTTTGTGCTG+TGG | + | chr1.1:1494886-1494905 | MS.gene27274:CDS | 45.0% | |
| GACGAGCAGGATACTTCTTA+AGG | - | chr1.1:1493983-1494002 | None:intergenic | 45.0% | |
| GCAGGATACTTCTTAAGGAC+AGG | - | chr1.1:1493978-1493997 | None:intergenic | 45.0% | |
| GCCATGAGAAATGTAATGGC+AGG | - | chr1.1:1493565-1493584 | None:intergenic | 45.0% | |
| GGACTATACTTTGTGCTGTG+GGG | + | chr1.1:1494888-1494907 | MS.gene27274:CDS | 45.0% | |
| GTCTGTCCTTCCTGAACAAA+AGG | - | chr1.1:1493186-1493205 | None:intergenic | 45.0% | |
| GTGCAGCTCTTGAAACAACA+TGG | - | chr1.1:1492654-1492673 | None:intergenic | 45.0% | |
| ! | CAGGCTTGGATTTTTCACTC+TGG | + | chr1.1:1494080-1494099 | MS.gene27274:CDS | 45.0% |
| ! | GCTTGGATTTTTCACTCTGG+TGG | + | chr1.1:1494083-1494102 | MS.gene27274:CDS | 45.0% |
| GAAGTGACAGAAAGACGAGC+AGG | - | chr1.1:1493996-1494015 | None:intergenic | 50.0% | |
| GAGAAGAGTTCTACTTGGGC+GGG | + | chr1.1:1494347-1494366 | MS.gene27274:CDS | 50.0% | |
| GAGTGAGTGATGCTTTAGCG+TGG | - | chr1.1:1494995-1495014 | None:intergenic | 50.0% | |
| GGAGAAGAGTTCTACTTGGG+CGG | + | chr1.1:1494346-1494365 | MS.gene27274:CDS | 50.0% | |
| TGATGCTTTAGCGTGGCTTG+CGG | - | chr1.1:1494988-1495007 | None:intergenic | 50.0% | |
| !! | GGTGCAGTGTTGATAGTAGC+TGG | + | chr1.1:1494867-1494886 | MS.gene27274:CDS | 50.0% |
| ACCAAACTGCAGGGCCAACA+TGG | - | chr1.1:1492620-1492639 | None:intergenic | 55.0% | |
| GCCCTGCAGTTTGGTTATGC+TGG | + | chr1.1:1492625-1492644 | MS.gene27274:CDS | 55.0% | |
| TCAGCTGCATGTGGCCATGT+TGG | + | chr1.1:1492603-1492622 | MS.gene27274:CDS | 55.0% | |
| ! | GATGCTTTAGCGTGGCTTGC+GGG | - | chr1.1:1494987-1495006 | None:intergenic | 55.0% |
| GCCATGTTGGCCCTGCAGTT+TGG | + | chr1.1:1492616-1492635 | MS.gene27274:CDS | 60.0% | |
| TTGCAGGGAGTGGTGGCATC+TGG | + | chr1.1:1494211-1494230 | MS.gene27274:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 1492544 | 1495049 | 1492544 | ID=MS.gene27274 |
| chr1.1 | mRNA | 1492544 | 1495049 | 1492544 | ID=MS.gene27274.t1;Parent=MS.gene27274 |
| chr1.1 | exon | 1492544 | 1492764 | 1492544 | ID=MS.gene27274.t1.exon1;Parent=MS.gene27274.t1 |
| chr1.1 | CDS | 1492544 | 1492764 | 1492544 | ID=cds.MS.gene27274.t1;Parent=MS.gene27274.t1 |
| chr1.1 | exon | 1493195 | 1493257 | 1493195 | ID=MS.gene27274.t1.exon2;Parent=MS.gene27274.t1 |
| chr1.1 | CDS | 1493195 | 1493257 | 1493195 | ID=cds.MS.gene27274.t1;Parent=MS.gene27274.t1 |
| chr1.1 | exon | 1493480 | 1493596 | 1493480 | ID=MS.gene27274.t1.exon3;Parent=MS.gene27274.t1 |
| chr1.1 | CDS | 1493480 | 1493596 | 1493480 | ID=cds.MS.gene27274.t1;Parent=MS.gene27274.t1 |
| chr1.1 | exon | 1493686 | 1494130 | 1493686 | ID=MS.gene27274.t1.exon4;Parent=MS.gene27274.t1 |
| chr1.1 | CDS | 1493686 | 1494130 | 1493686 | ID=cds.MS.gene27274.t1;Parent=MS.gene27274.t1 |
| chr1.1 | exon | 1494217 | 1494368 | 1494217 | ID=MS.gene27274.t1.exon5;Parent=MS.gene27274.t1 |
| chr1.1 | CDS | 1494217 | 1494368 | 1494217 | ID=cds.MS.gene27274.t1;Parent=MS.gene27274.t1 |
| chr1.1 | exon | 1494860 | 1495049 | 1494860 | ID=MS.gene27274.t1.exon6;Parent=MS.gene27274.t1 |
| chr1.1 | CDS | 1494860 | 1495049 | 1494860 | ID=cds.MS.gene27274.t1;Parent=MS.gene27274.t1 |
| Gene Sequence |
| Protein sequence |
