Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049133.t1 | AET05293.2 | 99.2 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 3.80E-206 | 727.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049133.t1 | Q54UF8 | 27.1 | 339 | 218 | 8 | 35 | 347 | 23 | 358 | 3.2e-28 | 127.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049133.t1 | G7L8Z3 | 99.2 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 2.7e-206 | 727.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049133 | MS.gene05866 | 0.812816 | 3.50E-51 | -1.69E-46 |
| MS.gene049133 | MS.gene05930 | 0.85669 | 2.71E-62 | -1.69E-46 |
| MS.gene049133 | MS.gene061841 | 0.810786 | 9.69E-51 | -1.69E-46 |
| MS.gene049133 | MS.gene063037 | 0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene049133 | MS.gene065643 | 0.816043 | 6.78E-52 | -1.69E-46 |
| MS.gene049133 | MS.gene07138 | 0.81049 | 1.12E-50 | -1.69E-46 |
| MS.gene049133 | MS.gene071428 | 0.803178 | 3.95E-49 | -1.69E-46 |
| MS.gene049133 | MS.gene07618 | 0.80021 | 1.60E-48 | -1.69E-46 |
| MS.gene049133 | MS.gene07620 | 0.805298 | 1.43E-49 | -1.69E-46 |
| MS.gene049133 | MS.gene07622 | 0.810396 | 1.18E-50 | -1.69E-46 |
| MS.gene049133 | MS.gene08366 | 0.818224 | 2.19E-52 | -1.69E-46 |
| MS.gene049133 | MS.gene08815 | 0.80546 | 1.32E-49 | -1.69E-46 |
| MS.gene049133 | MS.gene08971 | 0.806094 | 9.72E-50 | -1.69E-46 |
| MS.gene049133 | MS.gene09275 | 0.800916 | 1.15E-48 | -1.69E-46 |
| MS.gene049133 | MS.gene09801 | 0.800742 | 1.25E-48 | -1.69E-46 |
| MS.gene049133 | MS.gene20032 | 0.804436 | 2.16E-49 | -1.69E-46 |
| MS.gene049133 | MS.gene20768 | 0.811264 | 7.64E-51 | -1.69E-46 |
| MS.gene049133 | MS.gene23003 | 0.803716 | 3.05E-49 | -1.69E-46 |
| MS.gene049133 | MS.gene24224 | 0.824859 | 6.42E-54 | -1.69E-46 |
| MS.gene049133 | MS.gene26665 | 0.813361 | 2.66E-51 | -1.69E-46 |
| MS.gene049133 | MS.gene27011 | 0.832026 | 1.20E-55 | -1.69E-46 |
| MS.gene049133 | MS.gene27274 | 0.805799 | 1.12E-49 | -1.69E-46 |
| MS.gene049133 | MS.gene32703 | 0.805294 | 1.43E-49 | -1.69E-46 |
| MS.gene049133 | MS.gene34980 | 0.819527 | 1.11E-52 | -1.69E-46 |
| MS.gene049133 | MS.gene42665 | 0.807506 | 4.89E-50 | -1.69E-46 |
| MS.gene049133 | MS.gene52607 | 0.811361 | 7.27E-51 | -1.69E-46 |
| MS.gene049133 | MS.gene63265 | 0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene049133 | MS.gene74270 | 0.80561 | 1.23E-49 | -1.69E-46 |
| MS.gene049133 | MS.gene74272 | 0.811312 | 7.46E-51 | -1.69E-46 |
| MS.gene049133 | MS.gene74328 | 0.806187 | 9.29E-50 | -1.69E-46 |
| MS.gene049133 | MS.gene80180 | 0.8062 | 9.23E-50 | -1.69E-46 |
| MS.gene049133 | MS.gene80183 | 0.80364 | 3.17E-49 | -1.69E-46 |
| MS.gene049133 | MS.gene90732 | 0.816933 | 4.28E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049133 | MS.gene047905 | PPI |
| MS.gene53603 | MS.gene049133 | PPI |
| MS.gene049133 | MS.gene64275 | PPI |
| MS.gene049133 | MS.gene05930 | PPI |
| MS.gene049133 | MS.gene01839 | PPI |
| MS.gene05930 | MS.gene049133 | PPI |
| MS.gene049133 | MS.gene00892 | PPI |
| MS.gene049133 | MS.gene04773 | PPI |
| MS.gene049133 | MS.gene015739 | PPI |
| MS.gene049133 | MS.gene064960 | PPI |
| MS.gene94998 | MS.gene049133 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049133.t1 | MTR_8g103740 | 99.162 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 0.0 | 731 |
| MS.gene049133.t1 | MTR_6g086060 | 73.278 | 363 | 92 | 3 | 1 | 358 | 1 | 363 | 0.0 | 544 |
| MS.gene049133.t1 | MTR_8g103740 | 99.242 | 264 | 2 | 0 | 95 | 358 | 1 | 264 | 0.0 | 538 |
| MS.gene049133.t1 | MTR_8g103740 | 98.844 | 173 | 2 | 0 | 186 | 358 | 1 | 173 | 3.03e-122 | 352 |
| MS.gene049133.t1 | MTR_1g046480 | 51.682 | 327 | 155 | 3 | 34 | 358 | 51 | 376 | 4.60e-116 | 344 |
| MS.gene049133.t1 | MTR_2g022060 | 28.402 | 338 | 219 | 4 | 34 | 349 | 28 | 364 | 3.43e-46 | 163 |
| MS.gene049133.t1 | MTR_7g057720 | 30.994 | 342 | 203 | 9 | 34 | 349 | 31 | 365 | 2.57e-38 | 142 |
| MS.gene049133.t1 | MTR_7g057720 | 28.933 | 356 | 209 | 9 | 34 | 349 | 31 | 382 | 1.53e-36 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049133.t1 | AT3G24460 | 69.106 | 369 | 102 | 3 | 1 | 358 | 1 | 368 | 0.0 | 541 |
| MS.gene049133.t1 | AT3G24460 | 69.106 | 369 | 102 | 3 | 1 | 358 | 1 | 368 | 0.0 | 541 |
| MS.gene049133.t1 | AT4G13345 | 71.944 | 360 | 96 | 2 | 1 | 358 | 1 | 357 | 0.0 | 529 |
| MS.gene049133.t1 | AT4G13345 | 71.944 | 360 | 96 | 2 | 1 | 358 | 1 | 357 | 0.0 | 528 |
| MS.gene049133.t1 | AT4G13345 | 71.389 | 360 | 98 | 2 | 1 | 358 | 1 | 357 | 0.0 | 525 |
| MS.gene049133.t1 | AT4G13345 | 71.389 | 360 | 98 | 2 | 1 | 358 | 1 | 357 | 0.0 | 525 |
| MS.gene049133.t1 | AT4G13345 | 71.709 | 357 | 96 | 2 | 1 | 355 | 1 | 354 | 0.0 | 524 |
| MS.gene049133.t1 | AT4G13345 | 67.219 | 302 | 94 | 2 | 1 | 300 | 1 | 299 | 1.50e-141 | 404 |
| MS.gene049133.t1 | AT4G13345 | 67.219 | 302 | 94 | 2 | 1 | 300 | 1 | 299 | 1.50e-141 | 404 |
| MS.gene049133.t1 | AT2G33205 | 48.555 | 346 | 173 | 4 | 15 | 358 | 32 | 374 | 4.06e-110 | 328 |
| MS.gene049133.t1 | AT2G33205 | 48.276 | 348 | 173 | 5 | 15 | 358 | 32 | 376 | 9.96e-109 | 324 |
| MS.gene049133.t1 | AT2G33205 | 48.406 | 345 | 171 | 5 | 15 | 355 | 32 | 373 | 1.09e-108 | 323 |
| MS.gene049133.t1 | AT2G33205 | 48.276 | 348 | 173 | 5 | 15 | 358 | 32 | 376 | 2.88e-108 | 324 |
| MS.gene049133.t1 | AT2G33205 | 48.276 | 348 | 173 | 5 | 15 | 358 | 32 | 376 | 2.88e-108 | 324 |
| MS.gene049133.t1 | AT2G33205 | 48.921 | 278 | 138 | 3 | 84 | 358 | 5 | 281 | 1.59e-88 | 270 |
| MS.gene049133.t1 | AT2G33205 | 49.438 | 267 | 131 | 3 | 95 | 358 | 1 | 266 | 3.99e-86 | 263 |
| MS.gene049133.t1 | AT2G33205 | 46.309 | 298 | 155 | 4 | 15 | 310 | 32 | 326 | 3.93e-84 | 259 |
| MS.gene049133.t1 | AT2G33205 | 46.309 | 298 | 155 | 4 | 15 | 310 | 32 | 326 | 3.93e-84 | 259 |
| MS.gene049133.t1 | AT3G06170 | 27.089 | 347 | 230 | 5 | 34 | 358 | 29 | 374 | 1.95e-38 | 142 |
| MS.gene049133.t1 | AT1G16180 | 30.172 | 348 | 200 | 9 | 34 | 349 | 31 | 367 | 3.19e-34 | 131 |
| MS.gene049133.t1 | AT1G16180 | 30.172 | 348 | 200 | 9 | 34 | 349 | 31 | 367 | 3.19e-34 | 131 |
Find 81 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGGCTTTATTCAAATTTA+TGG | 0.115224 | 4.1:-2572849 | MS.gene049133:intron |
| CCAGGGGAGGTGGCGCATTT+TGG | 0.174364 | 4.1:-2572716 | MS.gene049133:intron |
| GATGCTTAGCCAGTCTGTTT+TGG | 0.263287 | 4.1:+2571497 | None:intergenic |
| ATTCAACCTACAGGATTAAA+AGG | 0.275412 | 4.1:-2573261 | MS.gene049133:intron |
| TTTATATTGTCTTCCTTTGT+TGG | 0.276198 | 4.1:-2571699 | MS.gene049133:CDS |
| CAATGGTGGAAAAGACTGTT+TGG | 0.350902 | 4.1:-2573235 | MS.gene049133:CDS |
| TCCAAGGATTGGATGCATTT+CGG | 0.359677 | 4.1:+2573575 | None:intergenic |
| CAAACAACATCACATGAATA+TGG | 0.364727 | 4.1:+2572001 | None:intergenic |
| GACCGCATATGTCGTCTGTT+TGG | 0.370819 | 4.1:-2571974 | MS.gene049133:CDS |
| TCATATCCAATGATTCTTCA+TGG | 0.371838 | 4.1:-2573609 | MS.gene049133:CDS |
| CATAGATTCCAAATGCTTCC+AGG | 0.376091 | 4.1:-2571084 | MS.gene049133:intron |
| TTATGCTAATTAGTTGGATT+AGG | 0.382452 | 4.1:+2572564 | None:intergenic |
| GTTGAAGAAGATATGGAAAC+TGG | 0.390734 | 4.1:-2573661 | None:intergenic |
| ATGTGGGGTGGACCAGCACC+TGG | 0.391123 | 4.1:-2570431 | MS.gene049133:CDS |
| TATGCTAACCTGGAAGCATT+TGG | 0.394190 | 4.1:+2571076 | None:intergenic |
| GATGATGTACCATATGGTTA+TGG | 0.398590 | 4.1:-2570961 | MS.gene049133:CDS |
| AGCTGATTATGCTAATTAGT+TGG | 0.402425 | 4.1:+2572558 | None:intergenic |
| TGCTGGCTAATCTGTTGGCA+TGG | 0.404877 | 4.1:-2573522 | MS.gene049133:CDS |
| GCATGGGCTGCTCGTGACTA+TGG | 0.408101 | 4.1:-2573505 | MS.gene049133:CDS |
| ATTCTAACTCCAGGGCTGAT+GGG | 0.414558 | 4.1:-2571724 | MS.gene049133:CDS |
| CTGCTGGTGTATCATCCTTC+CGG | 0.415225 | 4.1:+2570986 | None:intergenic |
| TCGTAGTGCTTTAACAGAAA+TGG | 0.420048 | 4.1:-2573482 | MS.gene049133:CDS |
| TACTATTCTGACCCAGGTGC+TGG | 0.425466 | 4.1:+2570419 | None:intergenic |
| AATGGTGGAAAAGACTGTTT+GGG | 0.428647 | 4.1:-2573234 | MS.gene049133:CDS |
| TATTCTAACTCCAGGGCTGA+TGG | 0.432842 | 4.1:-2571725 | MS.gene049133:CDS |
| TTGGCAAACCTGCCTTCTAA+TGG | 0.434037 | 4.1:+2571672 | None:intergenic |
| TCCGAAATGCATCCAATCCT+TGG | 0.436210 | 4.1:-2573576 | MS.gene049133:CDS |
| ACTGAACCATGAAGAATCAT+TGG | 0.442403 | 4.1:+2573603 | None:intergenic |
| CTGCTGGAGAAAACTGCATC+AGG | 0.444077 | 4.1:-2571536 | MS.gene049133:CDS |
| TTTGTTGGTGCGCCATTAGA+AGG | 0.456775 | 4.1:-2571684 | MS.gene049133:intron |
| TGCTAATTAGTTGGATTAGG+AGG | 0.469122 | 4.1:+2572567 | None:intergenic |
| TTCTAACTCCAGGGCTGATG+GGG | 0.479038 | 4.1:-2571723 | MS.gene049133:CDS |
| GCATATGTCGTCTGTTTGGT+GGG | 0.483780 | 4.1:-2571970 | MS.gene049133:CDS |
| ACCATAAATTTGAATAAAGC+CGG | 0.484335 | 4.1:+2572848 | None:intergenic |
| CGCATATGTCGTCTGTTTGG+TGG | 0.485949 | 4.1:-2571971 | MS.gene049133:CDS |
| TATCTGCAATAGGTTAATGC+TGG | 0.506107 | 4.1:-2571748 | MS.gene049133:intron |
| GCTGGCTAATCTGTTGGCAT+GGG | 0.507922 | 4.1:-2573521 | MS.gene049133:CDS |
| TTGCTATGCTATTGGTTGGA+TGG | 0.512496 | 4.1:-2570900 | MS.gene049133:CDS |
| ATATAAAGCCCCATCAGCCC+TGG | 0.514306 | 4.1:+2571715 | None:intergenic |
| TTGAGAAGGCAAGAAGGCTC+TGG | 0.515041 | 4.1:+2571919 | None:intergenic |
| TTCTAATGGCGCACCAACAA+AGG | 0.520794 | 4.1:+2571686 | None:intergenic |
| GCAGAGGATGATGTACCATA+TGG | 0.526809 | 4.1:-2570967 | MS.gene049133:CDS |
| GGTTAGTCAAGATTGCTTTG+TGG | 0.532718 | 4.1:-2572905 | MS.gene049133:CDS |
| AATGCTGGTATTCTAACTCC+AGG | 0.540072 | 4.1:-2571733 | MS.gene049133:CDS |
| AAGAGAAACACATGGCACTC+TGG | 0.544859 | 4.1:-2572933 | MS.gene049133:CDS |
| ATATCTTGCCATCCAAGGAT+TGG | 0.547635 | 4.1:+2573564 | None:intergenic |
| TTCATTTACTATTCTGACCC+AGG | 0.547987 | 4.1:+2570413 | None:intergenic |
| TTTGTATGCAGTGAACCTGC+TGG | 0.553034 | 4.1:-2571552 | MS.gene049133:intron |
| GAGACACGCTGGTCATGAGT+TGG | 0.556515 | 4.1:+2571863 | None:intergenic |
| TATGGTACATCATCCTCTGC+TGG | 0.564240 | 4.1:+2570970 | None:intergenic |
| TAAGCATATCTTGCCATCCA+AGG | 0.572921 | 4.1:+2573559 | None:intergenic |
| TAATGAAGAAAATGTTGAGA+AGG | 0.573025 | 4.1:+2571905 | None:intergenic |
| AAATGCATCCAATCCTTGGA+TGG | 0.580170 | 4.1:-2573572 | MS.gene049133:CDS |
| TGGGCCAAATACAGGAGAGT+AGG | 0.583242 | 4.1:+2570845 | None:intergenic |
| TGCAGATGGACAATCGATGT+GGG | 0.585081 | 4.1:-2570447 | MS.gene049133:intron |
| ACTCTGCACCCAAAACAGAC+TGG | 0.587891 | 4.1:-2571506 | MS.gene049133:CDS |
| GAAACACATGGCACTCTGGA+TGG | 0.590908 | 4.1:-2572929 | MS.gene049133:CDS |
| AGCAAAATACATTGCTCCCG+TGG | 0.597392 | 4.1:+2570918 | None:intergenic |
| GGATTAAAAGGATGCAATGG+TGG | 0.606728 | 4.1:-2573249 | MS.gene049133:CDS |
| TTGAAGAAGATATGGAAACT+GGG | 0.607550 | 4.1:-2573660 | None:intergenic |
| AAAATGTTGAGAAGGCAAGA+AGG | 0.607677 | 4.1:+2571913 | None:intergenic |
| GCATAATCAGCTTCATCACA+TGG | 0.608507 | 4.1:-2572547 | MS.gene049133:CDS |
| CATATGTCGTCTGTTTGGTG+GGG | 0.610341 | 4.1:-2571969 | MS.gene049133:CDS |
| CTGCAGATGGACAATCGATG+TGG | 0.615803 | 4.1:-2570448 | MS.gene049133:intron |
| CATATCCCTGCAGTTCCGGA+AGG | 0.616238 | 4.1:-2571001 | MS.gene049133:intron |
| GAAACTGGGGAAAGCAACAA+TGG | 0.619670 | 4.1:-2573646 | MS.gene049133:CDS |
| TAAATTTGAATAAAGCCGGA+AGG | 0.631409 | 4.1:+2572852 | None:intergenic |
| ACAGGATTAAAAGGATGCAA+TGG | 0.633035 | 4.1:-2573252 | MS.gene049133:intron |
| TGTGGGGTGGACCAGCACCT+GGG | 0.634750 | 4.1:-2570430 | MS.gene049133:CDS |
| TTTCGGGTGCAGAGACACGC+TGG | 0.640882 | 4.1:+2571852 | None:intergenic |
| TGAAGAAGATATGGAAACTG+GGG | 0.648363 | 4.1:-2573659 | None:intergenic |
| GAAGGATGATACACCAGCAG+AGG | 0.655362 | 4.1:-2570983 | MS.gene049133:CDS |
| ATGCTGGTATTCTAACTCCA+GGG | 0.658480 | 4.1:-2571732 | MS.gene049133:CDS |
| ACACATGGCACTCTGGATGG+TGG | 0.661486 | 4.1:-2572926 | MS.gene049133:CDS |
| GATGGACAATCGATGTGGGG+TGG | 0.670497 | 4.1:-2570443 | MS.gene049133:CDS |
| AAAGCAACAATGGTAATGAG+AGG | 0.674245 | 4.1:-2573636 | MS.gene049133:CDS |
| CACCAAACAGACGACATATG+CGG | 0.707786 | 4.1:+2571972 | None:intergenic |
| TGGTGGAAAAGACTGTTTGG+GGG | 0.727512 | 4.1:-2573232 | MS.gene049133:CDS |
| GCAGATGGACAATCGATGTG+GGG | 0.732619 | 4.1:-2570446 | MS.gene049133:intron |
| ATGGTGGAAAAGACTGTTTG+GGG | 0.733016 | 4.1:-2573233 | MS.gene049133:CDS |
| TAAAGCAAAAGAGAAACACA+TGG | 0.747169 | 4.1:-2572941 | MS.gene049133:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATTTAGGATAATATA+AGG | - | chr4.1:2571994-2572013 | MS.gene049133:CDS | 10.0% |
| !! | AAAAGTAATAAGATAGATAA+AGG | + | chr4.1:2572803-2572822 | None:intergenic | 15.0% |
| !! | TAGTTATTCATATTCATTTA+TGG | - | chr4.1:2570980-2570999 | MS.gene049133:CDS | 15.0% |
| !! | TGTGCTTATATTATATAAAA+AGG | - | chr4.1:2571744-2571763 | MS.gene049133:intron | 15.0% |
| !! | TTTATATAATATAAGCACAA+TGG | + | chr4.1:2571743-2571762 | None:intergenic | 15.0% |
| !!! | AAAATGTTTTAAACAAGTAA+AGG | + | chr4.1:2572266-2572285 | None:intergenic | 15.0% |
| !!! | TTAGCTTGAATTTTATTATT+AGG | - | chr4.1:2573027-2573046 | MS.gene049133:intron | 15.0% |
| !!! | TTTATCTATCTTATTACTTT+TGG | - | chr4.1:2572802-2572821 | MS.gene049133:intron | 15.0% |
| !!! | TTTCAATAAAAATGTTTTTG+TGG | + | chr4.1:2573494-2573513 | None:intergenic | 15.0% |
| !! | TAAAAAATGGAAATTAAGAG+AGG | + | chr4.1:2572469-2572488 | None:intergenic | 20.0% |
| !! | TAATAATAAATTCAACCTAC+AGG | - | chr4.1:2570800-2570819 | MS.gene049133:intron | 20.0% |
| !! | TTTCATGTATATAACTGAAA+AGG | + | chr4.1:2570903-2570922 | None:intergenic | 20.0% |
| !!! | AAACATTAGGCTATAATTTT+TGG | + | chr4.1:2572763-2572782 | None:intergenic | 20.0% |
| !!! | AACATTAGGCTATAATTTTT+GGG | + | chr4.1:2572762-2572781 | None:intergenic | 20.0% |
| !!! | AATACATTTCTTTTCATTGT+TGG | - | chr4.1:2572883-2572902 | MS.gene049133:CDS | 20.0% |
| !!! | ACAAGTTGATCAATTTATTT+AGG | - | chr4.1:2571983-2572002 | MS.gene049133:CDS | 20.0% |
| !!! | AGTACTTTTGACAATAAATT+TGG | + | chr4.1:2571795-2571814 | None:intergenic | 20.0% |
| !!! | TTAGATTTGATTTAAACCAA+TGG | + | chr4.1:2570783-2570802 | None:intergenic | 20.0% |
| ! | AAACAAGAAACCATATGATA+TGG | + | chr4.1:2573248-2573267 | None:intergenic | 25.0% |
| ! | AACAAGAAACCATATGATAT+GGG | + | chr4.1:2573247-2573266 | None:intergenic | 25.0% |
| ! | AACAATAGACTAGAAACATT+AGG | + | chr4.1:2572776-2572795 | None:intergenic | 25.0% |
| ! | AAGACAGCTATAAAACTTTA+CGG | + | chr4.1:2573391-2573410 | None:intergenic | 25.0% |
| ! | AATCTCAAGCATATTATTCA+TGG | + | chr4.1:2571629-2571648 | None:intergenic | 25.0% |
| ! | AATGTAGAAATAAGAAACAG+GGG | - | chr4.1:2573281-2573300 | MS.gene049133:intron | 25.0% |
| ! | ACCATAAATTTGAATAAAGC+CGG | + | chr4.1:2571225-2571244 | None:intergenic | 25.0% |
| ! | ATAGAAAAAAACCACTAATC+TGG | - | chr4.1:2571889-2571908 | MS.gene049133:CDS | 25.0% |
| ! | ATTGTATCAAAGGAATTACT+AGG | + | chr4.1:2571327-2571346 | None:intergenic | 25.0% |
| ! | CAATGAAAGCAACAATATAT+TGG | + | chr4.1:2570732-2570751 | None:intergenic | 25.0% |
| ! | CAATGTAGAAATAAGAAACA+GGG | - | chr4.1:2573280-2573299 | MS.gene049133:intron | 25.0% |
| ! | CCATCATATATAAGATTAAG+AGG | + | chr4.1:2571403-2571422 | None:intergenic | 25.0% |
| ! | CCTCTTAATCTTATATATGA+TGG | - | chr4.1:2571400-2571419 | MS.gene049133:intron | 25.0% |
| ! | TAACCTATTGCAGATAAAAT+TGG | + | chr4.1:2572318-2572337 | None:intergenic | 25.0% |
| ! | TAATGAAGAAAATGTTGAGA+AGG | + | chr4.1:2572168-2572187 | None:intergenic | 25.0% |
| ! | TACATGAAATTAGTCACTAA+AGG | - | chr4.1:2570914-2570933 | MS.gene049133:CDS | 25.0% |
| ! | TCAATGTAGAAATAAGAAAC+AGG | - | chr4.1:2573279-2573298 | MS.gene049133:intron | 25.0% |
| ! | TGATCATTGATGAATAACAA+TGG | + | chr4.1:2573327-2573346 | None:intergenic | 25.0% |
| ! | TGGTAAAAGAATTGTATCAA+AGG | + | chr4.1:2571337-2571356 | None:intergenic | 25.0% |
| ! | TTATGCTAATTAGTTGGATT+AGG | + | chr4.1:2571509-2571528 | None:intergenic | 25.0% |
| ! | TTTATATTGTCTTCCTTTGT+TGG | - | chr4.1:2572371-2572390 | MS.gene049133:intron | 25.0% |
| !! | TAAATGTTATAGCAAGTTGA+TGG | - | chr4.1:2573584-2573603 | MS.gene049133:CDS | 25.0% |
| !! | TCAACATTTTCTTCATTACT+TGG | - | chr4.1:2572170-2572189 | MS.gene049133:intron | 25.0% |
| !! | TTGATACAATTCTTTTACCA+GGG | - | chr4.1:2571337-2571356 | MS.gene049133:intron | 25.0% |
| !! | TTTGATACAATTCTTTTACC+AGG | - | chr4.1:2571336-2571355 | MS.gene049133:intron | 25.0% |
| !! | TTTTCATGGCATTTATTTGA+TGG | + | chr4.1:2572727-2572746 | None:intergenic | 25.0% |
| !!! | AATGTATTTTGCTATGCTAT+TGG | - | chr4.1:2573162-2573181 | MS.gene049133:intron | 25.0% |
| !!! | AGGGATATTCATTTTTCTTT+TGG | - | chr4.1:2571702-2571721 | MS.gene049133:CDS | 25.0% |
| !!! | ATAATGTTTTTGTCAACTAC+TGG | - | chr4.1:2571095-2571114 | MS.gene049133:CDS | 25.0% |
| !!! | ATATATTGTTGCTTTCATTG+AGG | - | chr4.1:2570732-2570751 | MS.gene049133:intron | 25.0% |
| !!! | CTTATTTTATATTTGAGCGT+CGG | - | chr4.1:2572489-2572508 | MS.gene049133:intron | 25.0% |
| !!! | GTTTTAAACAAGTAAAGGTA+TGG | + | chr4.1:2572261-2572280 | None:intergenic | 25.0% |
| !!! | TTATTTTATATTTGAGCGTC+GGG | - | chr4.1:2572490-2572509 | MS.gene049133:intron | 25.0% |
| AAGTAGAACACACAATTTGT+TGG | + | chr4.1:2570705-2570724 | None:intergenic | 30.0% | |
| ACAGATTATGCATTTATACC+TGG | + | chr4.1:2571275-2571294 | None:intergenic | 30.0% | |
| AGACAGCTATAAAACTTTAC+GGG | + | chr4.1:2573390-2573409 | None:intergenic | 30.0% | |
| AGCTGATTATGCTAATTAGT+TGG | + | chr4.1:2571515-2571534 | None:intergenic | 30.0% | |
| ATTCAACCTACAGGATTAAA+AGG | - | chr4.1:2570809-2570828 | MS.gene049133:intron | 30.0% | |
| CAAACAACATCACATGAATA+TGG | + | chr4.1:2572072-2572091 | None:intergenic | 30.0% | |
| GAAAGCAACAATATATTGGA+TGG | + | chr4.1:2570728-2570747 | None:intergenic | 30.0% | |
| GGCTAAATGATATATGACAA+TGG | + | chr4.1:2570639-2570658 | None:intergenic | 30.0% | |
| GGGATATGTAAGAAAGTTAT+TGG | + | chr4.1:2573057-2573076 | None:intergenic | 30.0% | |
| TAAAGCAAAAGAGAAACACA+TGG | - | chr4.1:2571129-2571148 | MS.gene049133:CDS | 30.0% | |
| TAAATTTGAATAAAGCCGGA+AGG | + | chr4.1:2571221-2571240 | None:intergenic | 30.0% | |
| TATCAGCTCATTGAATTACT+TGG | + | chr4.1:2573449-2573468 | None:intergenic | 30.0% | |
| TCATATCCAATGATTCTTCA+TGG | - | chr4.1:2570461-2570480 | MS.gene049133:intron | 30.0% | |
| TCATATGAATATGATGCCAT+TGG | - | chr4.1:2570764-2570783 | MS.gene049133:intron | 30.0% | |
| TCATATTCATTTATGGTGAG+TGG | - | chr4.1:2570987-2571006 | MS.gene049133:CDS | 30.0% | |
| TCGTACAACATAACTTGATT+TGG | - | chr4.1:2572287-2572306 | MS.gene049133:intron | 30.0% | |
| TGATATAGAATGTCTGAACT+TGG | + | chr4.1:2571076-2571095 | None:intergenic | 30.0% | |
| TGGAAAAAACCATAACCATA+TGG | + | chr4.1:2573121-2573140 | None:intergenic | 30.0% | |
| ! | AAATGCAAAAGCACAGTATT+AGG | + | chr4.1:2571921-2571940 | None:intergenic | 30.0% |
| ! | ACAACAGTTATTGAGTTTTG+TGG | + | chr4.1:2573366-2573385 | None:intergenic | 30.0% |
| ! | TCACTAAAGGCTTTGTATAA+AGG | - | chr4.1:2570927-2570946 | MS.gene049133:CDS | 30.0% |
| ! | TCTCCAATTTTATCTGCAAT+AGG | - | chr4.1:2572312-2572331 | MS.gene049133:intron | 30.0% |
| ! | TGATACAATTCTTTTACCAG+GGG | - | chr4.1:2571338-2571357 | MS.gene049133:intron | 30.0% |
| ! | TGTTGGTTGACAAATGATAA+TGG | - | chr4.1:2572900-2572919 | MS.gene049133:CDS | 30.0% |
| !! | CAACGTTTTAACAATAGCAA+GGG | - | chr4.1:2571683-2571702 | MS.gene049133:intron | 30.0% |
| !! | CACACAATTTGTTGGTTAAA+TGG | + | chr4.1:2570697-2570716 | None:intergenic | 30.0% |
| !! | GGATCATTTTGATGTACATT+TGG | - | chr4.1:2572122-2572141 | MS.gene049133:intron | 30.0% |
| !! | TATTTTGCTATGCTATTGGT+TGG | - | chr4.1:2573166-2573185 | MS.gene049133:intron | 30.0% |
| !! | TCAACGTTTTAACAATAGCA+AGG | - | chr4.1:2571682-2571701 | MS.gene049133:intron | 30.0% |
| !! | TCCGGCTTTATTCAAATTTA+TGG | - | chr4.1:2571221-2571240 | MS.gene049133:intron | 30.0% |
| !! | TTATTGAGTTTTGTGGTTTC+TGG | + | chr4.1:2573359-2573378 | None:intergenic | 30.0% |
| !!! | TTTCCATTTTGTTTTTGCCA+CGG | - | chr4.1:2573135-2573154 | MS.gene049133:intron | 30.0% |
| AAAATGTTGAGAAGGCAAGA+AGG | + | chr4.1:2572160-2572179 | None:intergenic | 35.0% | |
| AACACTGATCAGACAACAAT+TGG | + | chr4.1:2571839-2571858 | None:intergenic | 35.0% | |
| ACAGGATTAAAAGGATGCAA+TGG | - | chr4.1:2570818-2570837 | MS.gene049133:intron | 35.0% | |
| ACTGAACCATGAAGAATCAT+TGG | + | chr4.1:2570470-2570489 | None:intergenic | 35.0% | |
| ATATCCTACTCTCCTGTATT+TGG | - | chr4.1:2573221-2573240 | MS.gene049133:CDS | 35.0% | |
| ATATGATATGGGCCAAATAC+AGG | + | chr4.1:2573236-2573255 | None:intergenic | 35.0% | |
| ATCACATGAATATGGCTGTA+TGG | + | chr4.1:2572064-2572083 | None:intergenic | 35.0% | |
| ATTAGCCAGCAGAAAAATCA+AGG | + | chr4.1:2570539-2570558 | None:intergenic | 35.0% | |
| ATTCAGAGTTTATGCTAACC+TGG | + | chr4.1:2573007-2573026 | None:intergenic | 35.0% | |
| CAAAACTGTTCAGCAAAAGT+TGG | + | chr4.1:2572420-2572439 | None:intergenic | 35.0% | |
| CAAAGCTTTACAGGTAGAAT+AGG | + | chr4.1:2571947-2571966 | None:intergenic | 35.0% | |
| CACAGATAGAACATACTTTC+GGG | + | chr4.1:2572237-2572256 | None:intergenic | 35.0% | |
| CCACAGATAGAACATACTTT+CGG | + | chr4.1:2572238-2572257 | None:intergenic | 35.0% | |
| GAATGTCTGAACTTGGATTA+AGG | + | chr4.1:2571069-2571088 | None:intergenic | 35.0% | |
| GATGATGTACCATATGGTTA+TGG | - | chr4.1:2573109-2573128 | MS.gene049133:intron | 35.0% | |
| GATTATGCATTTATACCTGG+AGG | + | chr4.1:2571272-2571291 | None:intergenic | 35.0% | |
| GGTAAAAGTAAGACTATACC+CGG | + | chr4.1:2571382-2571401 | None:intergenic | 35.0% | |
| TATCTGCAATAGGTTAATGC+TGG | - | chr4.1:2572322-2572341 | MS.gene049133:intron | 35.0% | |
| TATGCCTATCAAAGCTTTAC+AGG | + | chr4.1:2571956-2571975 | None:intergenic | 35.0% | |
| TCGTAGTGCTTTAACAGAAA+TGG | - | chr4.1:2570588-2570607 | MS.gene049133:intron | 35.0% | |
| TGTATTTGGCCCATATCATA+TGG | - | chr4.1:2573235-2573254 | MS.gene049133:CDS | 35.0% | |
| TTCTTCGGTTAGAGAAAAAC+AGG | - | chr4.1:2571595-2571614 | MS.gene049133:intron | 35.0% | |
| TTTGTGAGCTCATAACTATC+AGG | + | chr4.1:2572652-2572671 | None:intergenic | 35.0% | |
| ! | AAAGCAACAATGGTAATGAG+AGG | - | chr4.1:2570434-2570453 | MS.gene049133:CDS | 35.0% |
| ! | AATGGTGGAAAAGACTGTTT+GGG | - | chr4.1:2570836-2570855 | MS.gene049133:intron | 35.0% |
| ! | ATGATTTGCCATAATAAGCG+TGG | + | chr4.1:2570673-2570692 | None:intergenic | 35.0% |
| ! | GGAATAAGTAGCAGTTTTCA+TGG | + | chr4.1:2572741-2572760 | None:intergenic | 35.0% |
| ! | GTTATTGCGACATTTTCAAC+AGG | - | chr4.1:2572963-2572982 | MS.gene049133:CDS | 35.0% |
| ! | TCTACCTGTAAAGCTTTGAT+AGG | - | chr4.1:2571949-2571968 | MS.gene049133:CDS | 35.0% |
| ! | TGATTTGCCATAATAAGCGT+GGG | + | chr4.1:2570672-2570691 | None:intergenic | 35.0% |
| ! | TGCTAATTAGTTGGATTAGG+AGG | + | chr4.1:2571506-2571525 | None:intergenic | 35.0% |
| ! | TTATGCCTTGATTTTTCTGC+TGG | - | chr4.1:2570531-2570550 | MS.gene049133:intron | 35.0% |
| ! | TTGCATCCTTTTAATCCTGT+AGG | + | chr4.1:2570818-2570837 | None:intergenic | 35.0% |
| !! | AAAAGTACTCTAGAGTGTAG+AGG | - | chr4.1:2571806-2571825 | MS.gene049133:intron | 35.0% |
| !! | AAAGTACTCTAGAGTGTAGA+GGG | - | chr4.1:2571807-2571826 | MS.gene049133:intron | 35.0% |
| !! | CAAATGATAATGGCTGTTGT+TGG | - | chr4.1:2572910-2572929 | MS.gene049133:CDS | 35.0% |
| !! | CACGTTGGTAAGATTTTCTT+CGG | - | chr4.1:2571580-2571599 | MS.gene049133:intron | 35.0% |
| !! | TTAGGTTGATACCAGATTAG+TGG | + | chr4.1:2571903-2571922 | None:intergenic | 35.0% |
| !!! | ATCCCATTTTTTCTACCTTC+CGG | - | chr4.1:2571203-2571222 | MS.gene049133:intron | 35.0% |
| !!! | TTCCATTTTGTTTTTGCCAC+GGG | - | chr4.1:2573136-2573155 | MS.gene049133:intron | 35.0% |
| AAACCCTGAAAAGGAATGAC+AGG | + | chr4.1:2571482-2571501 | None:intergenic | 40.0% | |
| AAATGCATCCAATCCTTGGA+TGG | - | chr4.1:2570498-2570517 | MS.gene049133:intron | 40.0% | |
| AAGCCGGAAGGTAGAAAAAA+TGG | + | chr4.1:2571209-2571228 | None:intergenic | 40.0% | |
| AATGCTGGTATTCTAACTCC+AGG | - | chr4.1:2572337-2572356 | MS.gene049133:intron | 40.0% | |
| AGCCGGAAGGTAGAAAAAAT+GGG | + | chr4.1:2571208-2571227 | None:intergenic | 40.0% | |
| ATATCTTGCCATCCAAGGAT+TGG | + | chr4.1:2570509-2570528 | None:intergenic | 40.0% | |
| ATGCTGGTATTCTAACTCCA+GGG | - | chr4.1:2572338-2572357 | MS.gene049133:intron | 40.0% | |
| CATAGATTCCAAATGCTTCC+AGG | - | chr4.1:2572986-2573005 | MS.gene049133:CDS | 40.0% | |
| CATTGAATTACTTGGCGTCA+GGG | + | chr4.1:2573441-2573460 | None:intergenic | 40.0% | |
| CTGAAAAATATGCAGCACGT+TGG | - | chr4.1:2571565-2571584 | MS.gene049133:intron | 40.0% | |
| GCATAATCAGCTTCATCACA+TGG | - | chr4.1:2571523-2571542 | MS.gene049133:CDS | 40.0% | |
| GGATTAAAAGGATGCAATGG+TGG | - | chr4.1:2570821-2570840 | MS.gene049133:intron | 40.0% | |
| TAAGCATATCTTGCCATCCA+AGG | + | chr4.1:2570514-2570533 | None:intergenic | 40.0% | |
| TCATTGAATTACTTGGCGTC+AGG | + | chr4.1:2573442-2573461 | None:intergenic | 40.0% | |
| TCCAAGGATTGGATGCATTT+CGG | + | chr4.1:2570498-2570517 | None:intergenic | 40.0% | |
| TGGATACACGTATGTGACAA+TGG | + | chr4.1:2572707-2572726 | None:intergenic | 40.0% | |
| TTAGGAGGAAAACCCTGAAA+AGG | + | chr4.1:2571491-2571510 | None:intergenic | 40.0% | |
| TTATCTTTCAACAAGCCTCC+AGG | - | chr4.1:2571254-2571273 | MS.gene049133:intron | 40.0% | |
| TTCTCACTTGTAGTGTTCGT+TGG | - | chr4.1:2573529-2573548 | MS.gene049133:CDS | 40.0% | |
| TTGCATGACAGAATATCAGC+TGG | - | chr4.1:2573413-2573432 | MS.gene049133:intron | 40.0% | |
| ! | ATGCTTAGCCAGTCTGTTTT+GGG | + | chr4.1:2572575-2572594 | None:intergenic | 40.0% |
| ! | ATGGTGGAAAAGACTGTTTG+GGG | - | chr4.1:2570837-2570856 | MS.gene049133:intron | 40.0% |
| ! | CAATGGTGGAAAAGACTGTT+TGG | - | chr4.1:2570835-2570854 | MS.gene049133:intron | 40.0% |
| ! | CCGAAAGTATGTTCTATCTG+TGG | - | chr4.1:2572235-2572254 | MS.gene049133:intron | 40.0% |
| ! | GGTTAGTCAAGATTGCTTTG+TGG | - | chr4.1:2571165-2571184 | MS.gene049133:intron | 40.0% |
| ! | GTTCCTGTCATTCCTTTTCA+GGG | - | chr4.1:2571476-2571495 | MS.gene049133:intron | 40.0% |
| ! | TACAATTCTTTTACCAGGGG+AGG | - | chr4.1:2571341-2571360 | MS.gene049133:intron | 40.0% |
| ! | TGTTCCTGTCATTCCTTTTC+AGG | - | chr4.1:2571475-2571494 | MS.gene049133:intron | 40.0% |
| ! | TTGCTATGCTATTGGTTGGA+TGG | - | chr4.1:2573170-2573189 | MS.gene049133:intron | 40.0% |
| !! | AAGTACTCTAGAGTGTAGAG+GGG | - | chr4.1:2571808-2571827 | MS.gene049133:intron | 40.0% |
| !! | TATGCTAACCTGGAAGCATT+TGG | + | chr4.1:2572997-2573016 | None:intergenic | 40.0% |
| !! | TTTTCTGCTGGCTAATCTGT+TGG | - | chr4.1:2570543-2570562 | MS.gene049133:intron | 40.0% |
| AAGAGAAACACATGGCACTC+TGG | - | chr4.1:2571137-2571156 | MS.gene049133:CDS | 45.0% | |
| AGCAAAATACATTGCTCCCG+TGG | + | chr4.1:2573155-2573174 | None:intergenic | 45.0% | |
| ATTCTAACTCCAGGGCTGAT+GGG | - | chr4.1:2572346-2572365 | MS.gene049133:intron | 45.0% | |
| CACCAAACAGACGACATATG+CGG | + | chr4.1:2572101-2572120 | None:intergenic | 45.0% | |
| CTCCCGTGGCAAAAACAAAA+TGG | + | chr4.1:2573141-2573160 | None:intergenic | 45.0% | |
| CTTACATATCCCTGCAGTTC+CGG | - | chr4.1:2573065-2573084 | MS.gene049133:intron | 45.0% | |
| GAAACTGGGGAAAGCAACAA+TGG | - | chr4.1:2570424-2570443 | MS.gene049133:CDS | 45.0% | |
| GCAGAGGATGATGTACCATA+TGG | - | chr4.1:2573103-2573122 | MS.gene049133:intron | 45.0% | |
| GCATATGTCGTCTGTTTGGT+GGG | - | chr4.1:2572100-2572119 | MS.gene049133:intron | 45.0% | |
| GTCCATCTGCAGAAGAATGA+AGG | + | chr4.1:2573614-2573633 | None:intergenic | 45.0% | |
| TATGGTACATCATCCTCTGC+TGG | + | chr4.1:2573103-2573122 | None:intergenic | 45.0% | |
| TATTCTAACTCCAGGGCTGA+TGG | - | chr4.1:2572345-2572364 | MS.gene049133:intron | 45.0% | |
| TCCGAAATGCATCCAATCCT+TGG | - | chr4.1:2570494-2570513 | MS.gene049133:intron | 45.0% | |
| TGCAGATGGACAATCGATGT+GGG | - | chr4.1:2573623-2573642 | MS.gene049133:CDS | 45.0% | |
| TGCCTTCATTCTTCTGCAGA+TGG | - | chr4.1:2573609-2573628 | MS.gene049133:CDS | 45.0% | |
| TGGTGGAAAAGACTGTTTGG+GGG | - | chr4.1:2570838-2570857 | MS.gene049133:intron | 45.0% | |
| TTCTAATGGCGCACCAACAA+AGG | + | chr4.1:2572387-2572406 | None:intergenic | 45.0% | |
| TTGCAGTCCCACGCTTATTA+TGG | - | chr4.1:2570662-2570681 | MS.gene049133:intron | 45.0% | |
| TTGGCAAACCTGCCTTCTAA+TGG | + | chr4.1:2572401-2572420 | None:intergenic | 45.0% | |
| TTTGTATGCAGTGAACCTGC+TGG | - | chr4.1:2572518-2572537 | MS.gene049133:CDS | 45.0% | |
| TTTGTTGGTGCGCCATTAGA+AGG | - | chr4.1:2572386-2572405 | MS.gene049133:intron | 45.0% | |
| ! | AATTCTTTTACCAGGGGAGG+TGG | - | chr4.1:2571344-2571363 | MS.gene049133:intron | 45.0% |
| ! | CATATGTCGTCTGTTTGGTG+GGG | - | chr4.1:2572101-2572120 | MS.gene049133:intron | 45.0% |
| ! | GATGCTTAGCCAGTCTGTTT+TGG | + | chr4.1:2572576-2572595 | None:intergenic | 45.0% |
| !! | AATATAAAATAAGTAAAAAA+TGG | + | chr4.1:2572482-2572501 | None:intergenic | 5.0% |
| AAAGACTGTTTGGGGGCTGA+AGG | - | chr4.1:2570845-2570864 | MS.gene049133:intron | 50.0% | |
| ACTCTGCACCCAAAACAGAC+TGG | - | chr4.1:2572564-2572583 | MS.gene049133:CDS | 50.0% | |
| ATAAGCGTGGGACTGCAAGA+AGG | + | chr4.1:2570660-2570679 | None:intergenic | 50.0% | |
| ATATAAAGCCCCATCAGCCC+TGG | + | chr4.1:2572358-2572377 | None:intergenic | 50.0% | |
| ATCATCCTTCCGGAACTGCA+GGG | + | chr4.1:2573077-2573096 | None:intergenic | 50.0% | |
| CGCATATGTCGTCTGTTTGG+TGG | - | chr4.1:2572099-2572118 | MS.gene049133:intron | 50.0% | |
| CTGCAGATGGACAATCGATG+TGG | - | chr4.1:2573622-2573641 | MS.gene049133:CDS | 50.0% | |
| CTGCTGGAGAAAACTGCATC+AGG | - | chr4.1:2572534-2572553 | MS.gene049133:CDS | 50.0% | |
| CTGCTGGTGTATCATCCTTC+CGG | + | chr4.1:2573087-2573106 | None:intergenic | 50.0% | |
| GAAACACATGGCACTCTGGA+TGG | - | chr4.1:2571141-2571160 | MS.gene049133:intron | 50.0% | |
| GAAGGATGATACACCAGCAG+AGG | - | chr4.1:2573087-2573106 | MS.gene049133:intron | 50.0% | |
| GACCGCATATGTCGTCTGTT+TGG | - | chr4.1:2572096-2572115 | MS.gene049133:intron | 50.0% | |
| GCAGATGGACAATCGATGTG+GGG | - | chr4.1:2573624-2573643 | MS.gene049133:CDS | 50.0% | |
| GCTGGCTAATCTGTTGGCAT+GGG | - | chr4.1:2570549-2570568 | MS.gene049133:intron | 50.0% | |
| TATCATCCTTCCGGAACTGC+AGG | + | chr4.1:2573078-2573097 | None:intergenic | 50.0% | |
| TGGGCCAAATACAGGAGAGT+AGG | + | chr4.1:2573228-2573247 | None:intergenic | 50.0% | |
| TTCTAACTCCAGGGCTGATG+GGG | - | chr4.1:2572347-2572366 | MS.gene049133:intron | 50.0% | |
| TTGAGAAGGCAAGAAGGCTC+TGG | + | chr4.1:2572154-2572173 | None:intergenic | 50.0% | |
| TTTGTGGCACTGCTGAGTGA+TGG | + | chr4.1:2573478-2573497 | None:intergenic | 50.0% | |
| ! | CTGATGCAGTTTTCTCCAGC+AGG | + | chr4.1:2572536-2572555 | None:intergenic | 50.0% |
| ! | TGCTGGCTAATCTGTTGGCA+TGG | - | chr4.1:2570548-2570567 | MS.gene049133:intron | 50.0% |
| ACACATGGCACTCTGGATGG+TGG | - | chr4.1:2571144-2571163 | MS.gene049133:intron | 55.0% | |
| CATATCCCTGCAGTTCCGGA+AGG | - | chr4.1:2573069-2573088 | MS.gene049133:intron | 55.0% | |
| GAGACACGCTGGTCATGAGT+TGG | + | chr4.1:2572210-2572229 | None:intergenic | 55.0% | |
| GATGGACAATCGATGTGGGG+TGG | - | chr4.1:2573627-2573646 | MS.gene049133:CDS | 55.0% | |
| TTGGTGCGCCATTAGAAGGC+AGG | - | chr4.1:2572390-2572409 | MS.gene049133:intron | 55.0% | |
| ! | AGGCGTTTTGCGTGTGAGCT+TGG | - | chr4.1:2570865-2570884 | MS.gene049133:CDS | 55.0% |
| ! | GGCGTTTTGCGTGTGAGCTT+GGG | - | chr4.1:2570866-2570885 | MS.gene049133:CDS | 55.0% |
| ! | GCATGGGCTGCTCGTGACTA+TGG | - | chr4.1:2570565-2570584 | MS.gene049133:intron | 60.0% |
| ! | TTTCGGGTGCAGAGACACGC+TGG | + | chr4.1:2572221-2572240 | None:intergenic | 60.0% |
| !! | GAGGTGGCGCATTTTGGTGC+CGG | - | chr4.1:2571360-2571379 | MS.gene049133:intron | 60.0% |
| !!! | AGGTGGCGCATTTTGGTGCC+GGG | - | chr4.1:2571361-2571380 | MS.gene049133:intron | 60.0% |
| ATGTGGGGTGGACCAGCACC+TGG | - | chr4.1:2573639-2573658 | MS.gene049133:CDS | 65.0% | |
| CCAAAATGCGCCACCTCCCC+TGG | + | chr4.1:2571357-2571376 | None:intergenic | 65.0% | |
| TGTGGGGTGGACCAGCACCT+GGG | - | chr4.1:2573640-2573659 | MS.gene049133:CDS | 65.0% | |
| ! | CCAGGGGAGGTGGCGCATTT+TGG | - | chr4.1:2571354-2571373 | MS.gene049133:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 2570421 | 2573671 | 2570421 | ID=MS.gene049133 |
| chr4.1 | mRNA | 2570421 | 2573671 | 2570421 | ID=MS.gene049133.t1;Parent=MS.gene049133 |
| chr4.1 | exon | 2573479 | 2573671 | 2573479 | ID=MS.gene049133.t1.exon1;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2573479 | 2573671 | 2573479 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| chr4.1 | exon | 2573197 | 2573270 | 2573197 | ID=MS.gene049133.t1.exon2;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2573197 | 2573270 | 2573197 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| chr4.1 | exon | 2572850 | 2573009 | 2572850 | ID=MS.gene049133.t1.exon3;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2572850 | 2573009 | 2572850 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| chr4.1 | exon | 2572710 | 2572734 | 2572710 | ID=MS.gene049133.t1.exon4;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2572710 | 2572734 | 2572710 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| chr4.1 | exon | 2572506 | 2572595 | 2572506 | ID=MS.gene049133.t1.exon5;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2572506 | 2572595 | 2572506 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| chr4.1 | exon | 2571852 | 2572023 | 2571852 | ID=MS.gene049133.t1.exon6;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2571852 | 2572023 | 2571852 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| chr4.1 | exon | 2571685 | 2571758 | 2571685 | ID=MS.gene049133.t1.exon7;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2571685 | 2571758 | 2571685 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| chr4.1 | exon | 2571494 | 2571563 | 2571494 | ID=MS.gene049133.t1.exon8;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2571494 | 2571563 | 2571494 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| chr4.1 | exon | 2571085 | 2571156 | 2571085 | ID=MS.gene049133.t1.exon9;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2571085 | 2571156 | 2571085 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| chr4.1 | exon | 2570857 | 2571010 | 2570857 | ID=MS.gene049133.t1.exon10;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2570857 | 2571010 | 2570857 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| chr4.1 | exon | 2570421 | 2570464 | 2570421 | ID=MS.gene049133.t1.exon11;Parent=MS.gene049133.t1 |
| chr4.1 | CDS | 2570421 | 2570464 | 2570421 | ID=cds.MS.gene049133.t1;Parent=MS.gene049133.t1 |
| Gene Sequence |
| Protein sequence |
