AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059302

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059302.t1 MTR_2g087880 96.646 656 20 1 1 654 1 656 0.0 1326
MS.gene059302.t1 MTR_4g050060 66.267 667 204 9 1 653 1 660 0.0 843
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059302.t1 AT2G32590 54.545 682 268 15 1 652 1 670 0.0 662

Find 137 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATCTTACTGATATTATT+AGG 0.156513 2.2:-11326427 MS.gene059302:CDS
CTTGAAATGGACGAACTATT+TGG 0.185300 2.2:-11323877 MS.gene059302:CDS
TTGTGAATCGTTGTTGGATT+AGG 0.193039 2.2:+11326788 None:intergenic
TATAACCTTGCTCAGTTTCT+TGG 0.217721 2.2:+11325561 None:intergenic
GAGTCAAAATTTATTCATTA+AGG 0.252131 2.2:-11325640 MS.gene059302:CDS
TTCAGAAAGTAATAACGATT+TGG 0.270151 2.2:+11323527 None:intergenic
TGTGAATCGTTGTTGGATTA+GGG 0.272673 2.2:+11326789 None:intergenic
GGCTCATAGTGGCAGTCCTC+TGG 0.285317 2.2:+11323477 None:intergenic
GGTGAACGAATTCTTCAATA+TGG 0.294826 2.2:+11322664 None:intergenic
AGGCACTGAAACTTACTCTT+TGG 0.296051 2.2:-11322689 MS.gene059302:CDS
TGTTTGGTTGTCATGTTCAT+AGG 0.297576 2.2:+11324089 None:intergenic
TCATCTTACTGATATTATTA+GGG 0.298610 2.2:-11326426 MS.gene059302:CDS
GGTATCTTTCAGAGATATAT+TGG 0.302817 2.2:-11322298 MS.gene059302:CDS
TGAGGATAACTTGGAACATT+TGG 0.304229 2.2:+11324033 None:intergenic
TCAGACGCTACTCTAGTTAA+TGG 0.312497 2.2:-11324905 MS.gene059302:intron
ATGAATAACCTCGGGGTATA+TGG 0.318571 2.2:-11324518 MS.gene059302:CDS
GTTCGTCCATTTCAAGGTCT+TGG 0.328136 2.2:+11323884 None:intergenic
CCAAACATTTGTTGACGAAA+TGG 0.328872 2.2:-11324073 MS.gene059302:CDS
AATAACGATTTGGGACTCTT+TGG 0.330914 2.2:+11323537 None:intergenic
TCAGAAAGTAATAACGATTT+GGG 0.335785 2.2:+11323528 None:intergenic
GTTATCGGACATGCAAATTA+AGG 0.336863 2.2:-11324280 MS.gene059302:CDS
CCATTCAATTCATGGGATAA+TGG 0.348251 2.2:-11323129 MS.gene059302:CDS
TTTCATATGCCTATTGCATT+TGG 0.348915 2.2:-11322214 MS.gene059302:CDS
CATCCAAAGCTGTCCTGATT+TGG 0.352712 2.2:-11322172 MS.gene059302:CDS
CCATTTCGTCAACAAATGTT+TGG 0.357499 2.2:+11324073 None:intergenic
AGTCAAAATTTATTCATTAA+GGG 0.374514 2.2:-11325639 MS.gene059302:CDS
TTTGGAGGAGCAAAGATATC+TGG 0.375307 2.2:+11323555 None:intergenic
TTCTTTAGTGTCTTGGGAGG+AGG 0.380040 2.2:-11323332 MS.gene059302:intron
CAAACATTTGTTGACGAAAT+GGG 0.381258 2.2:-11324072 MS.gene059302:CDS
TCTCATTAGCCAAATGCAAT+AGG 0.390562 2.2:+11322205 None:intergenic
CAAATAGTTCGTCCATTTCA+AGG 0.392651 2.2:+11323878 None:intergenic
TTGTGTTGAACAGATGTTAT+CGG 0.392951 2.2:-11324295 MS.gene059302:CDS
AGGAAATTTCTCCAACTCTC+AGG 0.401940 2.2:-11324257 MS.gene059302:CDS
TTGTGAAGTTGGGGCTGAAA+TGG 0.404083 2.2:-11324139 MS.gene059302:CDS
ACAATGAACCATTCAATTCA+TGG 0.410340 2.2:-11323137 MS.gene059302:CDS
GAGGATAACTTGGAACATTT+GGG 0.417323 2.2:+11324034 None:intergenic
CCATTATCCCATGAATTGAA+TGG 0.417509 2.2:+11323129 None:intergenic
CATCCAAATCAGGACAGCTT+TGG 0.420010 2.2:+11322169 None:intergenic
TCCTTCCCAAGACCTTGAAA+TGG 0.423756 2.2:-11323890 MS.gene059302:CDS
TTCGTCCATTTCAAGGTCTT+GGG 0.424699 2.2:+11323885 None:intergenic
TCGATCTGTTTCATAGTCCT+TGG 0.426246 2.2:+11323618 None:intergenic
TTGCTGATGTTTGACGATAG+AGG 0.427230 2.2:+11324573 None:intergenic
ACTTATTTCTCAGCCTCGTC+AGG 0.428854 2.2:-11323049 MS.gene059302:intron
ATTGCATTCACTTGGAAAGT+TGG 0.429259 2.2:+11322275 None:intergenic
CAGAATCGGAGGGTTGAGAT+TGG 0.431366 2.2:+11326651 None:intergenic
CAGCTATTGATTGTGAAGTT+GGG 0.432915 2.2:-11324149 MS.gene059302:CDS
ATCTGTTTCATAGTCCTTGG+CGG 0.440938 2.2:+11323621 None:intergenic
CAAGAAGGGGATAGACAAAA+AGG 0.447852 2.2:-11324861 MS.gene059302:intron
AATAGCTTGACAAGATTCTC+TGG 0.447853 2.2:+11323456 None:intergenic
GCAGCTATTGATTGTGAAGT+TGG 0.448360 2.2:-11324150 MS.gene059302:CDS
GTCGAAACAAGTTGATGTTC+AGG 0.451028 2.2:-11322709 MS.gene059302:CDS
CTTAATGTGAAGAAGTTTGA+TGG 0.454625 2.2:-11324702 MS.gene059302:intron
AATCTGTTGCTTATTGAGAC+AGG 0.455241 2.2:+11326625 None:intergenic
TGCAAAACCTGAGGATAACT+TGG 0.455855 2.2:+11324024 None:intergenic
CCGACGAAGAAAGTGGTTGC+AGG 0.457786 2.2:+11326749 None:intergenic
TCAAGGTCTTGGGAAGGAAA+AGG 0.459689 2.2:+11323895 None:intergenic
TGCTGATGTTTGACGATAGA+GGG 0.462101 2.2:+11324574 None:intergenic
GATTACGAGAACTTCCCAAC+TGG 0.465197 2.2:-11324114 MS.gene059302:CDS
AACGATTTGGGACTCTTTGG+AGG 0.471742 2.2:+11323540 None:intergenic
ATGTGAAGATCATCCAAATC+AGG 0.474447 2.2:+11322159 None:intergenic
TTTGATTCACTAGACGTGCC+AGG 0.479319 2.2:-11324479 MS.gene059302:CDS
AAAGAACATACCTTTACATC+AGG 0.480251 2.2:+11323426 None:intergenic
GAAGTTAACGGTACGGCGGA+TGG 0.486509 2.2:+11326673 None:intergenic
AAATGTTCCAAGTTATCCTC+AGG 0.487798 2.2:-11324031 MS.gene059302:intron
GTTTGGTTGTCATGTTCATA+GGG 0.488490 2.2:+11324090 None:intergenic
ATGGATCAACCCTCAAAACT+AGG 0.500120 2.2:-11323644 MS.gene059302:CDS
CGTGGGCTGGTCCTGATCAT+TGG 0.500228 2.2:-11323801 MS.gene059302:CDS
TCTAAAGGGTGAGAAAGAAA+TGG 0.503232 2.2:-11322319 MS.gene059302:intron
TCGGGGTATATGGTAGATGT+AGG 0.504583 2.2:-11324508 MS.gene059302:CDS
AGCGCGTGCAGCACGAGCAG+CGG 0.507142 2.2:+11326700 None:intergenic
CCCTCAAAACTAGGCCGCCA+AGG 0.508355 2.2:-11323635 MS.gene059302:CDS
GCTCATAGTGGCAGTCCTCT+GGG 0.509800 2.2:+11323478 None:intergenic
GCAAGCTGCACTCTTGAAGC+TGG 0.512257 2.2:-11325662 MS.gene059302:CDS
TTTACTATCACCCTGAGAGT+TGG 0.519491 2.2:+11324246 None:intergenic
CATGTTCATAGGGCCCAGTT+GGG 0.519543 2.2:+11324100 None:intergenic
TCATGTTCATAGGGCCCAGT+TGG 0.521592 2.2:+11324099 None:intergenic
GTTCACTGTTCAACTGAAGA+TGG 0.522203 2.2:-11323663 MS.gene059302:CDS
TATTAGACGAAACTGATAGA+AGG 0.523162 2.2:-11324221 MS.gene059302:CDS
ACATCAGCAAAATTTGATGA+AGG 0.524176 2.2:-11324560 MS.gene059302:CDS
GGGTTGAGATTGGAAGTTAA+CGG 0.525361 2.2:+11326661 None:intergenic
TGACTAGCTACATACTTCCC+TGG 0.525636 2.2:+11324461 None:intergenic
GTTATTCATCAAAAGACCCT+TGG 0.529314 2.2:+11324532 None:intergenic
GGACGAGAAGAAAGCAAGAA+GGG 0.529943 2.2:-11324875 MS.gene059302:CDS
GCTGCAGCATTGCATTCACT+TGG 0.531173 2.2:+11322267 None:intergenic
CAAAATTTATTCATTAAGGG+TGG 0.531666 2.2:-11325636 MS.gene059302:CDS
GGCTGAAGATGACAATAATA+CGG 0.533026 2.2:-11326405 MS.gene059302:CDS
ATCAGCAAAATTTGATGAAG+GGG 0.533677 2.2:-11324558 MS.gene059302:CDS
TGGACGAGAAGAAAGCAAGA+AGG 0.537024 2.2:-11324876 MS.gene059302:CDS
ATTGAGACAGGGATCAGAAT+CGG 0.540222 2.2:+11326637 None:intergenic
GTTGTCACCTTTGTCAACAC+TGG 0.545624 2.2:-11324742 MS.gene059302:CDS
CAATGAACCATTCAATTCAT+GGG 0.558471 2.2:-11323136 MS.gene059302:CDS
ACGTTCGAGTTGGTCGTCGT+TGG 0.559171 2.2:+11326724 None:intergenic
AAGAAAGTGGTTGCAGGCGT+CGG 0.559329 2.2:+11326755 None:intergenic
AGGAGGATGAGAAAGCTCTC+AGG 0.559759 2.2:-11323315 MS.gene059302:intron
CATCAGCAAAATTTGATGAA+GGG 0.561286 2.2:-11324559 MS.gene059302:CDS
AAGTCCTTGCTAGAATGAGT+AGG 0.561314 2.2:-11325589 MS.gene059302:CDS
TCCATTTCAAGGTCTTGGGA+AGG 0.568297 2.2:+11323889 None:intergenic
CGGGGTATATGGTAGATGTA+GGG 0.570316 2.2:-11324507 MS.gene059302:CDS
CCTGCAACCACTTTCTTCGT+CGG 0.572190 2.2:-11326749 MS.gene059302:CDS
AGTCCTTGCTAGAATGAGTA+GGG 0.573837 2.2:-11325588 MS.gene059302:CDS
GGAAATTTCTCCAACTCTCA+GGG 0.577296 2.2:-11324256 MS.gene059302:CDS
AACGTAGGTGTATATACTGA+TGG 0.586088 2.2:-11323180 MS.gene059302:intron
CAAGATTCTCTGGCTCATAG+TGG 0.586343 2.2:+11323466 None:intergenic
ACACAAATGTGGAGATATGT+CGG 0.587598 2.2:+11322236 None:intergenic
ATCTGTTGCTTATTGAGACA+GGG 0.588105 2.2:+11326626 None:intergenic
GAGCAGCGGCACGTTCGAGT+TGG 0.598343 2.2:+11326714 None:intergenic
CTTGCTAGAATGAGTAGGGT+GGG 0.600570 2.2:-11325584 MS.gene059302:CDS
TCTTTCTTTAGTGTCTTGGG+AGG 0.603635 2.2:-11323335 MS.gene059302:intron
ATTACGAGAACTTCCCAACT+GGG 0.607690 2.2:-11324113 MS.gene059302:CDS
GTTGGAGCCGACGAAGAAAG+TGG 0.610556 2.2:+11326742 None:intergenic
AGCTATTGATTGTGAAGTTG+GGG 0.616414 2.2:-11324148 MS.gene059302:CDS
TTGATTCACTAGACGTGCCA+GGG 0.620373 2.2:-11324478 MS.gene059302:CDS
GAGATTGGAAGTTAACGGTA+CGG 0.621654 2.2:+11326666 None:intergenic
ATCGGACATGCAAATTAAGG+AGG 0.625294 2.2:-11324277 MS.gene059302:CDS
CCACCCTACTCATTCTAGCA+AGG 0.630829 2.2:+11325585 None:intergenic
TAGAGGCAACAACATCAGGT+AGG 0.633095 2.2:+11322129 None:intergenic
GATGATTCCAGTGTTGACAA+AGG 0.634680 2.2:+11324735 None:intergenic
GCTGATGTTTGACGATAGAG+GGG 0.635430 2.2:+11324575 None:intergenic
AGGCATATGAAACACAAATG+TGG 0.641785 2.2:+11322225 None:intergenic
GATAATGGAAGTGTTTGTGA+TGG 0.649020 2.2:-11323114 MS.gene059302:CDS
GAGACAGGGATCAGAATCGG+AGG 0.649212 2.2:+11326640 None:intergenic
CCTTGCTAGAATGAGTAGGG+TGG 0.650721 2.2:-11325585 MS.gene059302:CDS
GCTACTCTAGTTAATGGTGA+AGG 0.654217 2.2:-11324899 MS.gene059302:CDS
CGTAGTAGACCCACCTGACG+AGG 0.654957 2.2:+11323036 None:intergenic
ACTCTAGTTAATGGTGAAGG+TGG 0.656073 2.2:-11324896 MS.gene059302:CDS
GGTGGATTCAGCGTATTCTG+AGG 0.658093 2.2:-11325618 MS.gene059302:CDS
TCAGCAAAATTTGATGAAGG+GGG 0.660471 2.2:-11324557 MS.gene059302:CDS
ACATAATGTTTCAGATACAG+TGG 0.663967 2.2:-11324432 MS.gene059302:CDS
GACGAGAAGAAAGCAAGAAG+GGG 0.668713 2.2:-11324874 MS.gene059302:CDS
AGACAGGGATCAGAATCGGA+GGG 0.671664 2.2:+11326641 None:intergenic
GGAGGAGCAAAGATATCTGG+AGG 0.675297 2.2:+11323558 None:intergenic
TGATGATGCACATAGTGACA+TGG 0.696700 2.2:-11323085 MS.gene059302:CDS
CTTAGTATACCTGAAAACGA+AGG 0.711995 2.2:+11322643 None:intergenic
GTGGGCCAAGAAACTGAGCA+AGG 0.712196 2.2:-11325566 MS.gene059302:intron
TTGTGTTACAAAACTCCCAG+AGG 0.727998 2.2:-11323493 MS.gene059302:CDS
ATTGGAAGTTAACGGTACGG+CGG 0.730253 2.2:+11326669 None:intergenic
TACATCTACCATATACCCCG+AGG 0.731072 2.2:+11324510 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTTATTGTTAATAACA+CGG + chr2.2:11323215-11323234 None:intergenic 10.0%
!!! AAATAAATTTTATAACAAAG+AGG - chr2.2:11323710-11323729 MS.gene059302:intron 10.0%
!!! AAATATTTTTATTAAGTGTT+TGG - chr2.2:11325000-11325019 MS.gene059302:intron 10.0%
!!! GATATATATAAACTTTTTTT+TGG - chr2.2:11325963-11325982 MS.gene059302:intron 10.0%
!! AAAATAAACAAACCTAAAAA+AGG + chr2.2:11322829-11322848 None:intergenic 15.0%
!! AAATTAATCAGAAAAATACA+TGG - chr2.2:11322483-11322502 MS.gene059302:intron 15.0%
!! AATTAATCAGAAAAATACAT+GGG - chr2.2:11322484-11322503 MS.gene059302:intron 15.0%
!! AGTCAAAATTTATTCATTAA+GGG - chr2.2:11323310-11323329 MS.gene059302:intron 15.0%
!! GATATAAAGAAAAAAATGTT+GGG + chr2.2:11325679-11325698 None:intergenic 15.0%
!! TGAAAATAAAATTAATGATG+AGG + chr2.2:11326117-11326136 None:intergenic 15.0%
!!! ATGAATATTTTTGTTAAACT+AGG - chr2.2:11323865-11323884 MS.gene059302:CDS 15.0%
!!! TAAATTTCACAAATTTTCTT+GGG - chr2.2:11325362-11325381 MS.gene059302:intron 15.0%
!!! TATTTCAACTTTATTTTCTA+TGG - chr2.2:11326473-11326492 MS.gene059302:intron 15.0%
!!! TTAAATTTCACAAATTTTCT+TGG - chr2.2:11325361-11325380 MS.gene059302:intron 15.0%
!! AACTGAAAAAAGTAAATACA+TGG + chr2.2:11324339-11324358 None:intergenic 20.0%
!! ACATATAATTACATTCAATG+AGG + chr2.2:11322692-11322711 None:intergenic 20.0%
!! ATCATCTTACTGATATTATT+AGG - chr2.2:11322522-11322541 MS.gene059302:intron 20.0%
!! CTAAAAAAGGCAAAAATTTA+AGG + chr2.2:11322816-11322835 None:intergenic 20.0%
!! CTTTGTAATTCATATAAACT+AGG + chr2.2:11326379-11326398 None:intergenic 20.0%
!! GAAACAAATAAATATTAACC+TGG + chr2.2:11325580-11325599 None:intergenic 20.0%
!! GACTTGAAAAAACTATAAAA+AGG + chr2.2:11323423-11323442 None:intergenic 20.0%
!! GAGTCAAAATTTATTCATTA+AGG - chr2.2:11323309-11323328 MS.gene059302:intron 20.0%
!! GGATATAAAGAAAAAAATGT+TGG + chr2.2:11325680-11325699 None:intergenic 20.0%
!! TCATCTTACTGATATTATTA+GGG - chr2.2:11322523-11322542 MS.gene059302:intron 20.0%
!! TGGATTATGATATAACATTA+TGG - chr2.2:11323085-11323104 MS.gene059302:CDS 20.0%
!! TTAAGTGGATATAAAATCAT+TGG + chr2.2:11322898-11322917 None:intergenic 20.0%
!!! AATTGATTTTGAAATCTTTC+AGG - chr2.2:11325250-11325269 MS.gene059302:intron 20.0%
!!! ATATTGATTGATTTCTTATC+TGG - chr2.2:11323260-11323279 MS.gene059302:intron 20.0%
!!! ATGCTGATATATCATTATTT+TGG - chr2.2:11326038-11326057 MS.gene059302:intron 20.0%
!!! CAAGAATATAATTTTAGTGA+GGG + chr2.2:11326423-11326442 None:intergenic 20.0%
!!! CTTAAATTTTTGCCTTTTTT+AGG - chr2.2:11322814-11322833 MS.gene059302:intron 20.0%
!!! TGCTGATATATCATTATTTT+GGG - chr2.2:11326039-11326058 MS.gene059302:intron 20.0%
!!! TGTTTTAACTTTTAATTGCT+CGG - chr2.2:11323159-11323178 MS.gene059302:CDS 20.0%
!!! TTTTATATCCACTTAAAAAC+TGG - chr2.2:11322902-11322921 MS.gene059302:intron 20.0%
! AAACACACTAAAATAATCTC+TGG + chr2.2:11325724-11325743 None:intergenic 25.0%
! AATACATAGAAATCTAGTTG+TGG + chr2.2:11322941-11322960 None:intergenic 25.0%
! AATGCAAACATCTTCATTTA+TGG + chr2.2:11323741-11323760 None:intergenic 25.0%
! AGAAAGAACTTCAAAACTAT+AGG + chr2.2:11323782-11323801 None:intergenic 25.0%
! AGGTTTCATAATTTCTTGAA+AGG - chr2.2:11326327-11326346 MS.gene059302:intron 25.0%
! ATTAGTAGCAGTAAAATTGT+TGG - chr2.2:11322958-11322977 MS.gene059302:intron 25.0%
! CAAAATTTATTCATTAAGGG+TGG - chr2.2:11323313-11323332 MS.gene059302:intron 25.0%
! CAAAGAGCAAAAGATAAAAT+TGG + chr2.2:11326557-11326576 None:intergenic 25.0%
! TAACATCTCATCATTCTAAA+GGG - chr2.2:11326616-11326635 MS.gene059302:CDS 25.0%
! TAATTCATATAAACTAGGAG+AGG + chr2.2:11326374-11326393 None:intergenic 25.0%
! TATAAGTACAAACGTCAATA+TGG - chr2.2:11324601-11324620 MS.gene059302:intron 25.0%
! TCAGAAAGTAATAACGATTT+GGG + chr2.2:11325424-11325443 None:intergenic 25.0%
! TTAACATCTCATCATTCTAA+AGG - chr2.2:11326615-11326634 MS.gene059302:CDS 25.0%
! TTCAGAAAGTAATAACGATT+TGG + chr2.2:11325425-11325444 None:intergenic 25.0%
!! AATTTTCTGCACACAAATAA+GGG + chr2.2:11322468-11322487 None:intergenic 25.0%
!! ACTTCAATTTTATTGATCTG+TGG + chr2.2:11326205-11326224 None:intergenic 25.0%
!! GAATATCTATCTTTTAGTCT+GGG - chr2.2:11325105-11325124 MS.gene059302:intron 25.0%
!! TAATTTTCTGCACACAAATA+AGG + chr2.2:11322469-11322488 None:intergenic 25.0%
!! TGAATATCTATCTTTTAGTC+TGG - chr2.2:11325104-11325123 MS.gene059302:intron 25.0%
!! TGTACCTTTTATAACATTGT+AGG - chr2.2:11325023-11325042 MS.gene059302:intron 25.0%
!! TTTTCTTTCTTTAGTGTCTT+GGG - chr2.2:11325611-11325630 MS.gene059302:CDS 25.0%
!!! AATATAATTTTAGTGAGGGA+AGG + chr2.2:11326419-11326438 None:intergenic 25.0%
!!! ATGTTTTGTTTATAATTGCG+CGG - chr2.2:11323051-11323070 MS.gene059302:CDS 25.0%
!!! CTTTTGACTTTCAATCTAAT+GGG - chr2.2:11324752-11324771 MS.gene059302:intron 25.0%
!!! GCAAGAATATAATTTTAGTG+AGG + chr2.2:11326424-11326443 None:intergenic 25.0%
!!! GGTTTGTTTATTTTTGTTCA+TGG - chr2.2:11322835-11322854 MS.gene059302:intron 25.0%
!!! TCTTTTGACTTTCAATCTAA+TGG - chr2.2:11324751-11324770 MS.gene059302:intron 25.0%
AAAGAACATACCTTTACATC+AGG + chr2.2:11325526-11325545 None:intergenic 30.0%
AACTTAAGCTATAACTCCAA+TGG + chr2.2:11326166-11326185 None:intergenic 30.0%
AACTTCAAAACTATAGGAGT+GGG + chr2.2:11323776-11323795 None:intergenic 30.0%
ACAATGAACCATTCAATTCA+TGG - chr2.2:11325812-11325831 MS.gene059302:intron 30.0%
ACATAATGTTTCAGATACAG+TGG - chr2.2:11324517-11324536 MS.gene059302:CDS 30.0%
ACATCAGCAAAATTTGATGA+AGG - chr2.2:11324389-11324408 MS.gene059302:intron 30.0%
ATCAGCAAAATTTGATGAAG+GGG - chr2.2:11324391-11324410 MS.gene059302:intron 30.0%
CAAACATCTTCATTTATGGT+TGG + chr2.2:11323737-11323756 None:intergenic 30.0%
CAATGAACCATTCAATTCAT+GGG - chr2.2:11325813-11325832 MS.gene059302:intron 30.0%
CATCAGCAAAATTTGATGAA+GGG - chr2.2:11324390-11324409 MS.gene059302:intron 30.0%
CTTAATGTGAAGAAGTTTGA+TGG - chr2.2:11324247-11324266 MS.gene059302:CDS 30.0%
GAAGACAAACTGTCAAAATA+AGG + chr2.2:11323676-11323695 None:intergenic 30.0%
GGTATCTTTCAGAGATATAT+TGG - chr2.2:11326651-11326670 MS.gene059302:CDS 30.0%
TATTAGACGAAACTGATAGA+AGG - chr2.2:11324728-11324747 MS.gene059302:CDS 30.0%
TCAGAAAAATACATGGGATT+TGG - chr2.2:11322490-11322509 MS.gene059302:intron 30.0%
TCCTCCTACAATGTTATAAA+AGG + chr2.2:11325030-11325049 None:intergenic 30.0%
TGACGTTTGTACTTATAATG+TGG + chr2.2:11324598-11324617 None:intergenic 30.0%
TTCCAAAAAGTTATTGCCAT+TGG - chr2.2:11326147-11326166 MS.gene059302:intron 30.0%
TTGGAGTTATAGCTTAAGTT+TGG - chr2.2:11326166-11326185 MS.gene059302:intron 30.0%
TTGTACTTATAATGTGGCAA+AGG + chr2.2:11324592-11324611 None:intergenic 30.0%
TTGTGTTGAACAGATGTTAT+CGG - chr2.2:11324654-11324673 MS.gene059302:intron 30.0%
TTTCATATGCCTATTGCATT+TGG - chr2.2:11326735-11326754 MS.gene059302:CDS 30.0%
! ACCTTTTATAACATTGTAGG+AGG - chr2.2:11325026-11325045 MS.gene059302:intron 30.0%
! ATTTCTTTTGCCTGATGTAA+AGG - chr2.2:11325513-11325532 MS.gene059302:intron 30.0%
! ATTTTCTGCACACAAATAAG+GGG + chr2.2:11322467-11322486 None:intergenic 30.0%
! CAAACATTTGTTGACGAAAT+GGG - chr2.2:11324877-11324896 MS.gene059302:CDS 30.0%
! CTTAATTGCATCTAAAACGT+AGG - chr2.2:11325754-11325773 MS.gene059302:intron 30.0%
! CTTTTCTTTCTTTAGTGTCT+TGG - chr2.2:11325610-11325629 MS.gene059302:CDS 30.0%
! GATAACTTGTCATACAATTG+AGG + chr2.2:11323533-11323552 None:intergenic 30.0%
! GATTGATTTCTTATCTGGTT+AGG - chr2.2:11323265-11323284 MS.gene059302:intron 30.0%
! GGTATATACATGTTGATGAA+AGG - chr2.2:11325985-11326004 MS.gene059302:intron 30.0%
! TACGGAGACTAATTTTCAAA+TGG - chr2.2:11322562-11322581 MS.gene059302:intron 30.0%
! TATCTTTTAGTCTGGGTTTT+AGG - chr2.2:11325112-11325131 MS.gene059302:intron 30.0%
! TTCTGTCTGTTACTTGTTTA+TGG - chr2.2:11324285-11324304 MS.gene059302:CDS 30.0%
!! GTAGTATTCCAGTTTTTAAG+TGG + chr2.2:11322913-11322932 None:intergenic 30.0%
!! TTAACTTTTAATTGCTCGGA+CGG - chr2.2:11323163-11323182 MS.gene059302:CDS 30.0%
!!! AATAAGGCAGTTTTTTGTGA+AGG + chr2.2:11323660-11323679 None:intergenic 30.0%
!!! ACTAGTGGTTTTATGCATTT+GGG - chr2.2:11325214-11325233 MS.gene059302:intron 30.0%
AAAGATAAAATTGGTCGCCA+AGG + chr2.2:11326548-11326567 None:intergenic 35.0%
AAATGTTCCAAGTTATCCTC+AGG - chr2.2:11324918-11324937 MS.gene059302:intron 35.0%
AACGTAGGTGTATATACTGA+TGG - chr2.2:11325769-11325788 MS.gene059302:intron 35.0%
AATAGCTTGACAAGATTCTC+TGG + chr2.2:11325496-11325515 None:intergenic 35.0%
AATATTAACCTGGAGAGAGA+TGG + chr2.2:11325570-11325589 None:intergenic 35.0%
AATCGACATTAATGTACTGC+TGG + chr2.2:11323912-11323931 None:intergenic 35.0%
ACACAAATGTGGAGATATGT+CGG + chr2.2:11326716-11326735 None:intergenic 35.0%
AGGCATATGAAACACAAATG+TGG + chr2.2:11326727-11326746 None:intergenic 35.0%
AGTACCAAAAAGCTAAAGGT+GGG - chr2.2:11325172-11325191 MS.gene059302:intron 35.0%
ATCGACATTAATGTACTGCT+GGG + chr2.2:11323911-11323930 None:intergenic 35.0%
ATGTGAAGATCATCCAAATC+AGG + chr2.2:11326793-11326812 None:intergenic 35.0%
ATTGCATTCACTTGGAAAGT+TGG + chr2.2:11326677-11326696 None:intergenic 35.0%
CAAATAGTTCGTCCATTTCA+AGG + chr2.2:11325074-11325093 None:intergenic 35.0%
CCATTATCCCATGAATTGAA+TGG + chr2.2:11325823-11325842 None:intergenic 35.0%
CCATTCAATTCATGGGATAA+TGG - chr2.2:11325820-11325839 MS.gene059302:intron 35.0%
CCATTTCGTCAACAAATGTT+TGG + chr2.2:11324879-11324898 None:intergenic 35.0%
CTTAGTATACCTGAAAACGA+AGG + chr2.2:11326309-11326328 None:intergenic 35.0%
CTTGAAATGGACGAACTATT+TGG - chr2.2:11325072-11325091 MS.gene059302:intron 35.0%
GAACTTCAAAACTATAGGAG+TGG + chr2.2:11323777-11323796 None:intergenic 35.0%
GAGGATAACTTGGAACATTT+GGG + chr2.2:11324918-11324937 None:intergenic 35.0%
GCATAGTTGAGAGAGAAAAT+GGG - chr2.2:11323821-11323840 MS.gene059302:CDS 35.0%
GGCTGAAGATGACAATAATA+CGG - chr2.2:11322544-11322563 MS.gene059302:intron 35.0%
GGTATCATTCATATACATGC+TGG - chr2.2:11326060-11326079 MS.gene059302:intron 35.0%
GGTGAACGAATTCTTCAATA+TGG + chr2.2:11326288-11326307 None:intergenic 35.0%
GTTATCGGACATGCAAATTA+AGG - chr2.2:11324669-11324688 MS.gene059302:intron 35.0%
GTTATTCATCAAAAGACCCT+TGG + chr2.2:11324420-11324439 None:intergenic 35.0%
GTTTGGTTGTCATGTTCATA+GGG + chr2.2:11324862-11324881 None:intergenic 35.0%
TAAACTAGGAGAGGATTGTA+TGG + chr2.2:11326365-11326384 None:intergenic 35.0%
TAGGTCAAAGAAAAATGCGT+GGG - chr2.2:11325131-11325150 MS.gene059302:intron 35.0%
TATAACCTTGCTCAGTTTCT+TGG + chr2.2:11323391-11323410 None:intergenic 35.0%
TCAGCAAAATTTGATGAAGG+GGG - chr2.2:11324392-11324411 MS.gene059302:intron 35.0%
TCTAAAGGGTGAGAAAGAAA+TGG - chr2.2:11326630-11326649 MS.gene059302:CDS 35.0%
TCTCATTAGCCAAATGCAAT+AGG + chr2.2:11326747-11326766 None:intergenic 35.0%
TGAGGATAACTTGGAACATT+TGG + chr2.2:11324919-11324938 None:intergenic 35.0%
TGCATAGTTGAGAGAGAAAA+TGG - chr2.2:11323820-11323839 MS.gene059302:CDS 35.0%
TGTGAATCGTTGTTGGATTA+GGG + chr2.2:11322163-11322182 None:intergenic 35.0%
TGTTTGGTTGTCATGTTCAT+AGG + chr2.2:11324863-11324882 None:intergenic 35.0%
TTAGGTCAAAGAAAAATGCG+TGG - chr2.2:11325130-11325149 MS.gene059302:intron 35.0%
TTGTGAATCGTTGTTGGATT+AGG + chr2.2:11322164-11322183 None:intergenic 35.0%
TTGTTTATAATTGCGCGGAT+GGG - chr2.2:11323056-11323075 MS.gene059302:CDS 35.0%
TTTGTTTATAATTGCGCGGA+TGG - chr2.2:11323055-11323074 MS.gene059302:CDS 35.0%
! AATAACGATTTGGGACTCTT+TGG + chr2.2:11325415-11325434 None:intergenic 35.0%
! AATCTGTTGCTTATTGAGAC+AGG + chr2.2:11322327-11322346 None:intergenic 35.0%
! AGCTATTGATTGTGAAGTTG+GGG - chr2.2:11324801-11324820 MS.gene059302:intron 35.0%
! ATCTGTTGCTTATTGAGACA+GGG + chr2.2:11322326-11322345 None:intergenic 35.0%
! CAGCTATTGATTGTGAAGTT+GGG - chr2.2:11324800-11324819 MS.gene059302:intron 35.0%
! CCAAACATTTGTTGACGAAA+TGG - chr2.2:11324876-11324895 MS.gene059302:CDS 35.0%
! CTCAGGTAATATGTGCTTTT+GGG - chr2.2:11325651-11325670 MS.gene059302:CDS 35.0%
! CTCCAATGGCAATAACTTTT+TGG + chr2.2:11326152-11326171 None:intergenic 35.0%
! GGTCTTTTGATGAATAACCT+CGG - chr2.2:11324422-11324441 MS.gene059302:CDS 35.0%
! GTCTTTTGATGAATAACCTC+GGG - chr2.2:11324423-11324442 MS.gene059302:CDS 35.0%
! GTGAATGTCTGAAATCTGAA+TGG - chr2.2:11323586-11323605 MS.gene059302:CDS 35.0%
! TCTCAGGTAATATGTGCTTT+TGG - chr2.2:11325650-11325669 MS.gene059302:CDS 35.0%
! TCTTTTGATGAATAACCTCG+GGG - chr2.2:11324424-11324443 MS.gene059302:CDS 35.0%
! TTTAAAGCATCTTCCAAGAC+AGG + chr2.2:11324976-11324995 None:intergenic 35.0%
! TTTTGCCAGAGATATTCAAC+AGG + chr2.2:11324569-11324588 None:intergenic 35.0%
!! AAAAGCTAAAGGTGGGTTTT+AGG - chr2.2:11325179-11325198 MS.gene059302:intron 35.0%
!! GATAATGGAAGTGTTTGTGA+TGG - chr2.2:11325835-11325854 MS.gene059302:intron 35.0%
!! TAAAGTTCTAAGTGCCTAAG+TGG - chr2.2:11324170-11324189 MS.gene059302:CDS 35.0%
!! TAACTTTTAATTGCTCGGAC+GGG - chr2.2:11323164-11323183 MS.gene059302:CDS 35.0%
!!! AAAACCCACCTTTAGCTTTT+TGG + chr2.2:11325179-11325198 None:intergenic 35.0%
!!! CTTCGTTTTCAGGTATACTA+AGG - chr2.2:11326307-11326326 MS.gene059302:intron 35.0%
!!! GACTAGTGGTTTTATGCATT+TGG - chr2.2:11325213-11325232 MS.gene059302:intron 35.0%
!!! TGGGTTTTAGGAGTTTGTAA+TGG - chr2.2:11325191-11325210 MS.gene059302:intron 35.0%
AAGCCTTAACCAACTAAGTG+GGG + chr2.2:11323981-11324000 None:intergenic 40.0%
AAGGGGATAGACAAAAAGGT+CGG - chr2.2:11324092-11324111 MS.gene059302:CDS 40.0%
AAGTCCTTGCTAGAATGAGT+AGG - chr2.2:11323360-11323379 MS.gene059302:intron 40.0%
ACAAGGCACATTGCTATGAA+GGG + chr2.2:11323469-11323488 None:intergenic 40.0%
ACTCTAGTTAATGGTGAAGG+TGG - chr2.2:11324053-11324072 MS.gene059302:CDS 40.0%
AGGAAATTTCTCCAACTCTC+AGG - chr2.2:11324692-11324711 MS.gene059302:intron 40.0%
AGTCCTTGCTAGAATGAGTA+GGG - chr2.2:11323361-11323380 MS.gene059302:intron 40.0%
ATCGAAAGACAGTGAATTGG+AGG + chr2.2:11325701-11325720 None:intergenic 40.0%
ATCGGACATGCAAATTAAGG+AGG - chr2.2:11324672-11324691 MS.gene059302:intron 40.0%
ATCTGTTTCATAGTCCTTGG+CGG + chr2.2:11325331-11325350 None:intergenic 40.0%
ATGAATAACCTCGGGGTATA+TGG - chr2.2:11324431-11324450 MS.gene059302:CDS 40.0%
ATGGATCAACCCTCAAAACT+AGG - chr2.2:11325305-11325324 MS.gene059302:intron 40.0%
ATTACGAGAACTTCCCAACT+GGG - chr2.2:11324836-11324855 MS.gene059302:intron 40.0%
ATTGAGACAGGGATCAGAAT+CGG + chr2.2:11322315-11322334 None:intergenic 40.0%
CAAGAAGGGGATAGACAAAA+AGG - chr2.2:11324088-11324107 MS.gene059302:CDS 40.0%
CAAGCCTTAACCAACTAAGT+GGG + chr2.2:11323982-11324001 None:intergenic 40.0%
CAGTACCAAAAAGCTAAAGG+TGG - chr2.2:11325171-11325190 MS.gene059302:intron 40.0%
CTAAAACAGTGCAAAACCTG+AGG + chr2.2:11324937-11324956 None:intergenic 40.0%
GAGATTGGAAGTTAACGGTA+CGG + chr2.2:11322286-11322305 None:intergenic 40.0%
GCAGTAAAATTGTTGGTCGA+AGG - chr2.2:11322965-11322984 MS.gene059302:intron 40.0%
GCTACTCTAGTTAATGGTGA+AGG - chr2.2:11324050-11324069 MS.gene059302:CDS 40.0%
GGAAATTTCTCCAACTCTCA+GGG - chr2.2:11324693-11324712 MS.gene059302:intron 40.0%
GGGTTGAGATTGGAAGTTAA+CGG + chr2.2:11322291-11322310 None:intergenic 40.0%
GTTCACTGTTCAACTGAAGA+TGG - chr2.2:11325286-11325305 MS.gene059302:intron 40.0%
TAAAACCTCTATGCCTGTCT+TGG - chr2.2:11324960-11324979 MS.gene059302:intron 40.0%
TCAGACGCTACTCTAGTTAA+TGG - chr2.2:11324044-11324063 MS.gene059302:CDS 40.0%
TCGATCTGTTTCATAGTCCT+TGG + chr2.2:11325334-11325353 None:intergenic 40.0%
TCTTTCTTTAGTGTCTTGGG+AGG - chr2.2:11325614-11325633 MS.gene059302:CDS 40.0%
TGCAAAACCTGAGGATAACT+TGG + chr2.2:11324928-11324947 None:intergenic 40.0%
TGCATGAACAAACACCACTT+AGG + chr2.2:11324187-11324206 None:intergenic 40.0%
TGCTGATGTTTGACGATAGA+GGG + chr2.2:11324378-11324397 None:intergenic 40.0%
TGGATCGAAAGACAGTGAAT+TGG + chr2.2:11325704-11325723 None:intergenic 40.0%
TGGCAGTACCAAAAAGCTAA+AGG - chr2.2:11325168-11325187 MS.gene059302:intron 40.0%
TGTTGCCTGTTGAATATCTC+TGG - chr2.2:11324561-11324580 MS.gene059302:CDS 40.0%
TTCATATACATGCTGGTGAC+AGG - chr2.2:11326067-11326086 MS.gene059302:intron 40.0%
TTCGTCCATTTCAAGGTCTT+GGG + chr2.2:11325067-11325086 None:intergenic 40.0%
TTGCTGATGTTTGACGATAG+AGG + chr2.2:11324379-11324398 None:intergenic 40.0%
TTGTGTTACAAAACTCCCAG+AGG - chr2.2:11325456-11325475 MS.gene059302:intron 40.0%
TTGTTAATAACACGGCTGTC+TGG + chr2.2:11323207-11323226 None:intergenic 40.0%
TTTACTATCACCCTGAGAGT+TGG + chr2.2:11324706-11324725 None:intergenic 40.0%
TTTGGAGGAGCAAAGATATC+TGG + chr2.2:11325397-11325416 None:intergenic 40.0%
! AAGACAGGCATAGAGGTTTT+AGG + chr2.2:11324961-11324980 None:intergenic 40.0%
! AGACAGGCATAGAGGTTTTA+GGG + chr2.2:11324960-11324979 None:intergenic 40.0%
! ATTCGTTCACCTTCGTTTTC+AGG - chr2.2:11326297-11326316 MS.gene059302:intron 40.0%
! GCAGCTATTGATTGTGAAGT+TGG - chr2.2:11324799-11324818 MS.gene059302:intron 40.0%
! GGTTCTTTTGATCTCTGAAC+TGG - chr2.2:11324113-11324132 MS.gene059302:CDS 40.0%
! GTGGATCTTTCTTTTGCAAG+AGG - chr2.2:11324536-11324555 MS.gene059302:CDS 40.0%
! TCTGTTACTTGTTTATGGCG+TGG - chr2.2:11324290-11324309 MS.gene059302:CDS 40.0%
! TGATGATGCACATAGTGACA+TGG - chr2.2:11325864-11325883 MS.gene059302:intron 40.0%
! TTTTGGTACTGCCAATGATC+AGG + chr2.2:11325162-11325181 None:intergenic 40.0%
!! AGGAGTTTGTAATGGACTAG+TGG - chr2.2:11325199-11325218 MS.gene059302:intron 40.0%
!! AGGCACTGAAACTTACTCTT+TGG - chr2.2:11326260-11326279 MS.gene059302:intron 40.0%
!! CGCTTTTTGTGAATCGTTGT+TGG + chr2.2:11322170-11322189 None:intergenic 40.0%
!! GATGATTCCAGTGTTGACAA+AGG + chr2.2:11324217-11324236 None:intergenic 40.0%
!! GGGAGTTTTGTAACACAATG+AGG + chr2.2:11325454-11325473 None:intergenic 40.0%
!! GTCGAAACAAGTTGATGTTC+AGG - chr2.2:11326240-11326259 MS.gene059302:intron 40.0%
!! TTTTTCAGTTGCGTTTGCTG+TGG - chr2.2:11324349-11324368 MS.gene059302:intron 40.0%
AATCCACCAACCAAAGGACA+AGG + chr2.2:11323486-11323505 None:intergenic 45.0%
AATGTGCCTTGTCCTTTGGT+TGG - chr2.2:11323477-11323496 MS.gene059302:CDS 45.0%
AGTTTCAACCATCTCTCTCC+AGG - chr2.2:11325559-11325578 MS.gene059302:intron 45.0%
ATCTTCCAAGACAGGCATAG+AGG + chr2.2:11324968-11324987 None:intergenic 45.0%
ATTGGAAGTTAACGGTACGG+CGG + chr2.2:11322283-11322302 None:intergenic 45.0%
CAAGGCACATTGCTATGAAG+GGG + chr2.2:11323468-11323487 None:intergenic 45.0%
CATCCAAAGCTGTCCTGATT+TGG - chr2.2:11326777-11326796 MS.gene059302:CDS 45.0%
CATCCAAATCAGGACAGCTT+TGG + chr2.2:11326783-11326802 None:intergenic 45.0%
CCAAGCCTTAACCAACTAAG+TGG + chr2.2:11323983-11324002 None:intergenic 45.0%
CCACTTAGTTGGTTAAGGCT+TGG - chr2.2:11323980-11323999 MS.gene059302:intron 45.0%
CCATACATGCCTTCAATCAG+AGG - chr2.2:11322754-11322773 MS.gene059302:intron 45.0%
CGGGGTATATGGTAGATGTA+GGG - chr2.2:11324442-11324461 MS.gene059302:CDS 45.0%
CTTAACCAACTAAGTGGGGT+CGG + chr2.2:11323977-11323996 None:intergenic 45.0%
CTTGCTAGAATGAGTAGGGT+GGG - chr2.2:11323365-11323384 MS.gene059302:intron 45.0%
GACAAGGCACATTGCTATGA+AGG + chr2.2:11323470-11323489 None:intergenic 45.0%
GACGAGAAGAAAGCAAGAAG+GGG - chr2.2:11324075-11324094 MS.gene059302:CDS 45.0%
GATTACGAGAACTTCCCAAC+TGG - chr2.2:11324835-11324854 MS.gene059302:intron 45.0%
GCTGATGTTTGACGATAGAG+GGG + chr2.2:11324377-11324396 None:intergenic 45.0%
GGACGAGAAGAAAGCAAGAA+GGG - chr2.2:11324074-11324093 MS.gene059302:CDS 45.0%
GGAGAGGATTGTATGGTACA+AGG + chr2.2:11326358-11326377 None:intergenic 45.0%
GTTCGTCCATTTCAAGGTCT+TGG + chr2.2:11325068-11325087 None:intergenic 45.0%
GTTGTCACCTTTGTCAACAC+TGG - chr2.2:11324207-11324226 MS.gene059302:CDS 45.0%
TACATCTACCATATACCCCG+AGG + chr2.2:11324442-11324461 None:intergenic 45.0%
TAGCAATGTGCCTTGTCCTT+TGG - chr2.2:11323473-11323492 MS.gene059302:CDS 45.0%
TCAAAGAAAAATGCGTGGGC+TGG - chr2.2:11325135-11325154 MS.gene059302:intron 45.0%
TCAAGGTCTTGGGAAGGAAA+AGG + chr2.2:11325057-11325076 None:intergenic 45.0%
TCCATTTCAAGGTCTTGGGA+AGG + chr2.2:11325063-11325082 None:intergenic 45.0%
TCCTTCCCAAGACCTTGAAA+TGG - chr2.2:11325059-11325078 MS.gene059302:intron 45.0%
TCGGGGTATATGGTAGATGT+AGG - chr2.2:11324441-11324460 MS.gene059302:CDS 45.0%
TGCTCGGACGGGATAAATTA+TGG - chr2.2:11323175-11323194 MS.gene059302:CDS 45.0%
TGGACGAGAAGAAAGCAAGA+AGG - chr2.2:11324073-11324092 MS.gene059302:CDS 45.0%
TGTCGAACACTGACATGTGT+TGG - chr2.2:11322728-11322747 MS.gene059302:CDS 45.0%
TTAGTGAGGGAAGGCTACAA+TGG + chr2.2:11326410-11326429 None:intergenic 45.0%
TTCTTTAGTGTCTTGGGAGG+AGG - chr2.2:11325617-11325636 MS.gene059302:CDS 45.0%
TTGATTCACTAGACGTGCCA+GGG - chr2.2:11324471-11324490 MS.gene059302:CDS 45.0%
TTGTGAAGTTGGGGCTGAAA+TGG - chr2.2:11324810-11324829 MS.gene059302:intron 45.0%
TTTGATTCACTAGACGTGCC+AGG - chr2.2:11324470-11324489 MS.gene059302:CDS 45.0%
! AACGATTTGGGACTCTTTGG+AGG + chr2.2:11325412-11325431 None:intergenic 45.0%
! ACTTATTTCTCAGCCTCGTC+AGG - chr2.2:11325900-11325919 MS.gene059302:intron 45.0%
! ATGCCTTCAATCAGAGGCAT+CGG - chr2.2:11322760-11322779 MS.gene059302:intron 45.0%
! CAAGATTCTCTGGCTCATAG+TGG + chr2.2:11325486-11325505 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2.2:11323134-11323153 None:intergenic 45.0%
! CCTCTGATTGAAGGCATGTA+TGG + chr2.2:11322757-11322776 None:intergenic 45.0%
! TGACTAGCTACATACTTCCC+TGG + chr2.2:11324491-11324510 None:intergenic 45.0%
!! TGTCCTTTGGTTGGTGGATT+GGG - chr2.2:11323486-11323505 MS.gene059302:CDS 45.0%
!! TTGTCCTTTGGTTGGTGGAT+TGG - chr2.2:11323485-11323504 MS.gene059302:CDS 45.0%
!!! ATATATATAAACTTTTTTTT+GGG - chr2.2:11325964-11325983 MS.gene059302:intron 5.0%
AAGAAAGTGGTTGCAGGCGT+CGG + chr2.2:11322197-11322216 None:intergenic 50.0%
AGACAGGGATCAGAATCGGA+GGG + chr2.2:11322311-11322330 None:intergenic 50.0%
AGGAGGATGAGAAAGCTCTC+AGG - chr2.2:11325634-11325653 MS.gene059302:CDS 50.0%
AGTCCCAATCCACCAACCAA+AGG + chr2.2:11323492-11323511 None:intergenic 50.0%
ATGTAGCCGACCCACTTAGT+GGG - chr2.2:11323121-11323140 MS.gene059302:CDS 50.0%
ATTGCGCGGATGGGACATTA+TGG - chr2.2:11323065-11323084 MS.gene059302:CDS 50.0%
ATTTCTCAGCCTCGTCAGGT+GGG - chr2.2:11325904-11325923 MS.gene059302:intron 50.0%
ATTTGATGAAGGGGGAGCCA+AGG - chr2.2:11324400-11324419 MS.gene059302:intron 50.0%
CAGAATCGGAGGGTTGAGAT+TGG + chr2.2:11322301-11322320 None:intergenic 50.0%
CATGTTCATAGGGCCCAGTT+GGG + chr2.2:11324852-11324871 None:intergenic 50.0%
CCACCCTACTCATTCTAGCA+AGG + chr2.2:11323367-11323386 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr2.2:11323132-11323151 MS.gene059302:CDS 50.0%
CCTGCAACCACTTTCTTCGT+CGG - chr2.2:11322200-11322219 MS.gene059302:CDS 50.0%
CCTTATCCCACTAAGTGGGT+CGG + chr2.2:11323130-11323149 None:intergenic 50.0%
CCTTGCTAGAATGAGTAGGG+TGG - chr2.2:11323364-11323383 MS.gene059302:intron 50.0%
CGACCCCACTTAGTTGGTTA+AGG - chr2.2:11323975-11323994 MS.gene059302:intron 50.0%
GCTGCAGCATTGCATTCACT+TGG + chr2.2:11326685-11326704 None:intergenic 50.0%
GCTTCCTGTTATACGTGCCT+TGG - chr2.2:11326528-11326547 MS.gene059302:intron 50.0%
GGAGGAGCAAAGATATCTGG+AGG + chr2.2:11325394-11325413 None:intergenic 50.0%
TATTTCTCAGCCTCGTCAGG+TGG - chr2.2:11325903-11325922 MS.gene059302:intron 50.0%
TCATGTTCATAGGGCCCAGT+TGG + chr2.2:11324853-11324872 None:intergenic 50.0%
TTTGATGAAGGGGGAGCCAA+GGG - chr2.2:11324401-11324420 MS.gene059302:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr2.2:11323135-11323154 None:intergenic 50.0%
! GGTGGATTCAGCGTATTCTG+AGG - chr2.2:11323331-11323350 MS.gene059302:intron 50.0%
ACATACGCCACACACGACTG+TGG - chr2.2:11322627-11322646 MS.gene059302:intron 55.0%
AGATGCCGACCCCACTTAGT+TGG - chr2.2:11323969-11323988 MS.gene059302:intron 55.0%
AGTCCGACACGTGTCTGTGT+CGG - chr2.2:11322997-11323016 MS.gene059302:intron 55.0%
CCGACCCACTTAGTGGGATA+AGG - chr2.2:11323127-11323146 MS.gene059302:CDS 55.0%
CCGACGAAGAAAGTGGTTGC+AGG + chr2.2:11322203-11322222 None:intergenic 55.0%
GAAGTTAACGGTACGGCGGA+TGG + chr2.2:11322279-11322298 None:intergenic 55.0%
GAGACAGGGATCAGAATCGG+AGG + chr2.2:11322312-11322331 None:intergenic 55.0%
GATGTAGCCGACCCACTTAG+TGG - chr2.2:11323120-11323139 MS.gene059302:CDS 55.0%
GCAAGCTGCACTCTTGAAGC+TGG - chr2.2:11323287-11323306 MS.gene059302:intron 55.0%
GCTCATAGTGGCAGTCCTCT+GGG + chr2.2:11325474-11325493 None:intergenic 55.0%
GTCGCCAAGGCACGTATAAC+AGG + chr2.2:11326535-11326554 None:intergenic 55.0%
GTGCCTTGTCCTTTGGTTGG+TGG - chr2.2:11323480-11323499 MS.gene059302:CDS 55.0%
GTGGGCCAAGAAACTGAGCA+AGG - chr2.2:11323383-11323402 MS.gene059302:intron 55.0%
GTTGGAGCCGACGAAGAAAG+TGG + chr2.2:11322210-11322229 None:intergenic 55.0%
! GTACCGACACAGACACGTGT+CGG + chr2.2:11323003-11323022 None:intergenic 55.0%
!! ACGTTCGAGTTGGTCGTCGT+TGG + chr2.2:11322228-11322247 None:intergenic 55.0%
!! AGAGGCATCGGCGCTACATA+GGG - chr2.2:11322772-11322791 MS.gene059302:intron 55.0%
!!! CCTTGGCGGCCTAGTTTTGA+GGG + chr2.2:11325317-11325336 None:intergenic 55.0%
!!! TCCTTGGCGGCCTAGTTTTG+AGG + chr2.2:11325318-11325337 None:intergenic 55.0%
CACAGACACGTGTCGGACTC+TGG + chr2.2:11322996-11323015 None:intergenic 60.0%
CCCTCAAAACTAGGCCGCCA+AGG - chr2.2:11325314-11325333 MS.gene059302:intron 60.0%
CGTAGTAGACCCACCTGACG+AGG + chr2.2:11325916-11325935 None:intergenic 60.0%
GGCTCATAGTGGCAGTCCTC+TGG + chr2.2:11325475-11325494 None:intergenic 60.0%
! GCGCCGATGCCTCTGATTGA+AGG + chr2.2:11322766-11322785 None:intergenic 60.0%
!! CAGAGGCATCGGCGCTACAT+AGG - chr2.2:11322771-11322790 MS.gene059302:intron 60.0%
!! CGTGGGCTGGTCCTGATCAT+TGG - chr2.2:11325148-11325167 MS.gene059302:intron 60.0%
!! GAGGCATCGGCGCTACATAG+GGG - chr2.2:11322773-11322792 MS.gene059302:intron 60.0%
CGACGTGCCACAGTCGTGTG+TGG + chr2.2:11322637-11322656 None:intergenic 65.0%
GAGCAGCGGCACGTTCGAGT+TGG + chr2.2:11322238-11322257 None:intergenic 65.0%
AGCGCGTGCAGCACGAGCAG+CGG + chr2.2:11322252-11322271 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 11322143 11326828 11322143 ID=MS.gene059302
chr2.2 mRNA 11322143 11326828 11322143 ID=MS.gene059302.t1;Parent=MS.gene059302
chr2.2 exon 11326583 11326828 11326583 ID=MS.gene059302.t1.exon1;Parent=MS.gene059302.t1
chr2.2 CDS 11326583 11326828 11326583 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11326388 11326489 11326388 ID=MS.gene059302.t1.exon2;Parent=MS.gene059302.t1
chr2.2 CDS 11326388 11326489 11326388 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11325567 11325684 11325567 ID=MS.gene059302.t1.exon3;Parent=MS.gene059302.t1
chr2.2 CDS 11325567 11325684 11325567 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11324862 11324923 11324862 ID=MS.gene059302.t1.exon4;Parent=MS.gene059302.t1
chr2.2 CDS 11324862 11324923 11324862 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11324703 11324763 11324703 ID=MS.gene059302.t1.exon5;Parent=MS.gene059302.t1
chr2.2 CDS 11324703 11324763 11324703 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11324414 11324614 11324414 ID=MS.gene059302.t1.exon6;Parent=MS.gene059302.t1
chr2.2 CDS 11324414 11324614 11324414 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11324032 11324318 11324032 ID=MS.gene059302.t1.exon7;Parent=MS.gene059302.t1
chr2.2 CDS 11324032 11324318 11324032 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11323782 11323926 11323782 ID=MS.gene059302.t1.exon8;Parent=MS.gene059302.t1
chr2.2 CDS 11323782 11323926 11323782 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11323437 11323699 11323437 ID=MS.gene059302.t1.exon9;Parent=MS.gene059302.t1
chr2.2 CDS 11323437 11323699 11323437 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11323316 11323346 11323316 ID=MS.gene059302.t1.exon10;Parent=MS.gene059302.t1
chr2.2 CDS 11323316 11323346 11323316 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11323050 11323195 11323050 ID=MS.gene059302.t1.exon11;Parent=MS.gene059302.t1
chr2.2 CDS 11323050 11323195 11323050 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11322653 11322763 11322653 ID=MS.gene059302.t1.exon12;Parent=MS.gene059302.t1
chr2.2 CDS 11322653 11322763 11322653 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
chr2.2 exon 11322143 11322334 11322143 ID=MS.gene059302.t1.exon13;Parent=MS.gene059302.t1
chr2.2 CDS 11322143 11322334 11322143 ID=cds.MS.gene059302.t1;Parent=MS.gene059302.t1
Gene Sequence

>MS.gene059302

ATGGCGGATTTCGCAAGCCCTAATCCAACAACGATTCACAAAAAGCGACTTCCGACGCCTGCAACCACTTTCTTCGTCGGCTCCAACGACGACCAACTCGAACGTGCCGCTGCTCGTGCTGCACGCGCTGCTGCCATCCGCCGTACCGTTAACTTCCAATCTCAACCCTCCGATTCTGATCCCTGTCTCAATAAGCAACAGATTCTTGAGTTGTTTCATAATTGCATTAAGCTTGCTTCAGAAAATGTAATAAATTAGTATTAATAATCAACAAAATGTTCTAATTCTTCTTCTATTTTTTATTCTTATTTTTGATTTTTTCCCCTTATTTGTGTGCAGAAAATTAATCAGAAAAATACATGGGATTTGGATTTGATTGATCATCTTACTGATATTATTAGGGCTGAAGATGACAATAATACGGAGACTAATTTTCAAATGGTAAGTTGCTTTTATTTATGAGTTTAAGCTATGAAGCATTGACACATACGCCACACACGACTGTGGCACGTCGACATTAGTAATCAGTAATAATTTATAAAATGACCTCATTGAATGTAATTATATGTGTCAGTAATGTGTCAGTGTCGAACACTGACATGTGTTGGACACCATACATGCCTTCAATCAGAGGCATCGGCGCTACATAGGGGTTAAGTCGTTACAATTTCCTTAAATTTTTGCCTTTTTTAGGTTTGTTTATTTTTGTTCATGGTGTTTCTTTATGTAGAGTTACTTGCATTTATGAATCTCCAATGATTTTATATCCACTTAAAAACTGGAATACTACAATCTCCACAACTAGATTTCTATGTATTAGTAGCAGTAAAATTGTTGGTCGAAGGTGTGTCCAGAGTCCGACACGTGTCTGTGTCGGTACTTACTTCATAGCTAGATTTTGAGAAACAATGTTTTGTTTATAATTGCGCGGATGGGACATTATGGATTATGATATAACATTATGGCGTAATTTGATCGATGTAGCCGACCCACTTAGTGGGATAAGGCTTGGTTGTTGTTTTAACTTTTAATTGCTCGGACGGGATAAATTATGGAATCAACCAGACAGCCGTGTTATTAACAATAAATTTATCGACATATATATGCATGTGATGTAATATTGATTGATTTCTTATCTGGTTAGGCAAGCTGCACTCTTGAAGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGCGTATTCTGAGGCATATAAAGTCCTTGCTAGAATGAGTAGGGTGGGCCAAGAAACTGAGCAAGGTTATATTGATCACACCTTTTTATAGTTTTTTCAAGTCTAGTATTTTTTGAACTTGTTTTCCCCTTCATAGCAATGTGCCTTGTCCTTTGGTTGGTGGATTGGGACTGTACATAACGACTTTATTCCTCAATTGTATGACAAGTTATCTAATTTTACTTAATGTTTAGTCATTAGTGTATTGTGAATGTCTGAAATCTGAATGGCTGCAGTATGCTTTCTACATCTCAATTTTTTAGTCTTTCTGCAGTTCTCCTTCACAAAAAACTGCCTTATTTTGACAGTTTGTCTTCTCTCTTTTGCTCTCAAATAAATTTTATAACAAAGAGGACCAACCATAAATGAAGATGTTTGCATTATAATAGAAGTACCCACTCCTATAGTTTTGAAGTTCTTTCTAATAGAAACTATGAGCATTGCATAGTTGAGAGAGAAAATGGGAGAAACTAAAATGATTGTGTTATGAATATTTTTGTTAAACTAGGTATATTTATTTTATTAGTTTCCCAGCAGTACATTAATGTCGATTTTATAACTACTTATATTTTATTATTCACTAGTTCTAAAGATGCCGACCCCACTTAGTTGGTTAAGGCTTGGTTGTTGTTGTTGTTGTACTAGTTCTAATGTTGTCATGATATTCAGACGCTACTCTAGTTAATGGTGAAGGTGGACGAGAAGAAAGCAAGAAGGGGATAGACAAAAAGGTCGGTTCTTTTGATCTCTGAACTGGACTTGCTTGAATAATCAAACTTCAAACTTATTGATAAAGTTCTAAGTGCCTAAGTGGTGTTTGTTCATGCAGTTGTCACCTTTGTCAACACTGGAATCATCTTTTGAAGCTCTTAATGTGAAGAAGTTTGATGGTGATCTCAAATCTCATTCTGTCTGTTACTTGTTTATGGCGTGGAAATGAGATTTATTGAGTGCTGACCATGTATTTACTTTTTTCAGTTGCGTTTGCTGTGGATCCCCTCTATCGTCAAACATCAGCAAAATTTGATGAAGGGGGAGCCAAGGGTCTTTTGATGAATAACCTCGGGGTATATGGTAGATGTAGGGTGCTTTTTGATTCACTAGACGTGCCAGGGAAGTATGTAGCTAGTCAAAACGAACATAATGTTTCAGATACAGTGGATCTTTCTTTTGCAAGAGGTATGTTGCCTGTTGAATATCTCTGGCAAAACCTTTGCCACATTATAAGTACAAACGTCAATATGGATCAGAGACTTACATTGTCTTCTTTATAGATTGTGTTGAACAGATGTTATCGGACATGCAAATTAAGGAGGAAATTTCTCCAACTCTCAGGGTGATAGTAAATATATTAGACGAAACTGATAGAAGGTCTTTTGACTTTCAATCTAATGGGCAGAAATCATCAGAAGAGTTTGATGCAGCTATTGATTGTGAAGTTGGGGCTGAAATGGAAGATTACGAGAACTTCCCAACTGGGCCCTATGAACATGACAACCAAACATTTGTTGACGAAATGGGCTCTAATGATGCAGACCCAAATGTTCCAAGTTATCCTCAGGTTTTGCACTGTTTTAGCCCTAAAACCTCTATGCCTGTCTTGGAAGATGCTTTAAAAGATAAATATTTTTATTAAGTGTTTGGTGTACCTTTTATAACATTGTAGGAGGAAGAACCTTTTCCTTCCCAAGACCTTGAAATGGACGAACTATTTGGAAATGTCGATGAATATCTATCTTTTAGTCTGGGTTTTAGGTCAAAGAAAAATGCGTGGGCTGGTCCTGATCATTGGCAGTACCAAAAAGCTAAAGGTGGGTTTTAGGAGTTTGTAATGGACTAGTGGTTTTATGCATTTGGGAGTTCAGCTTGTTAATTGATTTTGAAATCTTTCAGGTTCAGAGTCAGAAGTTCACTGTTCAACTGAAGATGGATCAACCCTCAAAACTAGGCCGCCAAGGACTATGAAACAGATCGAAGTTGATTTAAATTTCACAAATTTTCTTGGGAAAACACCTCCAGATATCTTTGCTCCTCCAAAGAGTCCCAAATCGTTATTACTTTCTGAAAATAGACCTCATTGTGTTACAAAACTCCCAGAGGACTGCCACTATGAGCCAGAGAATCTTGTCAAGCTATTTCTTTTGCCTGATGTAAAGGTATGTTCTTTAGATTTAGAATTTAGTTTCAACCATCTCTCTCCAGGTTAATATTTATTTGTTTCTTTATGTTTTCTTTTCTTTCTTTAGTGTCTTGGGAGGAGGATGAGAAAGCTCTCAGGTAATATGTGCTTTTGGGATCCCAACATTTTTTTCTTTATATCCTCCAATTCACTGTCTTTCGATCCAGAGATTATTTTAGTGTGTTTTCATGTATTACTTAATTGCATCTAAAACGTAGGTGTATATACTGATGGATCGACAGAGCAATGCAACAACAATGAACCATTCAATTCATGGGATAATGGAAGTGTTTGTGATGGTGAGTATGATGATGCACATAGTGACATGGATGACTCAAGCACACTTATTTCTCAGCCTCGTCAGGTGGGTCTACTACGCTATTGAATAATTACGCAATTGTTGTTGATATATATAAACTTTTTTTTGGGTATATACATGTTGATGAAAGGATATATCTTCATGAAGATATATTTCTCATTATGCTGATATATCATTATTTTGGGTATCATTCATATACATGCTGGTGACAGGATATCATTCATGAAGACATAGATTCCTCATCATTAATTTTATTTTCATCAGACAGTTTTCCAAAAAGTTATTGCCATTGGAGTTATAGCTTAAGTTTGGTTATTTCAAAATACCACAGATCAATAAAATTGAAGTTCAATATGACAAAACGTCGAAACAAGTTGATGTTCAGGCACTGAAACTTACTCTTTGGAACCATATTGAAGAATTCGTTCACCTTCGTTTTCAGGTATACTAAGGTTTCATAATTTCTTGAAAGGCTCTGCCTTGTACCATACAATCCTCTCCTAGTTTATATGAATTACAAAGCATCATTACCATTGTAGCCTTCCCTCACTAAAATTATATTCTTGCTGCAGTATTTTGTTTATAACATGCTATGTTATTTCAACTTTATTTTCTATGGCAACAACAATTCAATTGTAATGCTGTATTTTCGCTTCCTGTTATACGTGCCTTGGCGACCAATTTTATCTTTTGCTCTTTGTAGTTGAGCATCATTTTCTAACTGTTTTTTTTCTTTTCTTAACATCTCATCATTCTAAAGGGTGAGAAAGAAATGGTATCTTTCAGAGATATATTGGCCAACTTTCCAAGTGAATGCAATGCTGCAGCAACTGTTACCGACATATCTCCACATTTGTGTTTCATATGCCTATTGCATTTGGCTAATGAGAAAGAGTTGAGCATCCAAAGCTGTCCTGATTTGGATGATCTTCACATACATATGCCTACCTGA
Protein sequence

>MS.gene059302.t1

MADFASPNPTTIHKKRLPTPATTFFVGSNDDQLERAAARAARAAAIRRTVNFQSQPSDSDPCLNKQQILELFHNCIKLASENKINQKNTWDLDLIDHLTDIIRAEDDNNTETNFQMASCTLEAGVKIYSLRVDSAYSEAYKVLARMSRVGQETEQDATLVNGEGGREESKKGIDKKLSPLSTLESSFEALNVKKFDVAFAVDPLYRQTSAKFDEGGAKGLLMNNLGVYGRCRVLFDSLDVPGKYVASQNEHNVSDTVDLSFARDCVEQMLSDMQIKEEISPTLRVIVNILDETDRRSFDFQSNGQKSSEEFDAAIDCEVGAEMEDYENFPTGPYEHDNQTFVDEMGSNDADPNVPSYPQEEEPFPSQDLEMDELFGNVDEYLSFSLGFRSKKNAWAGPDHWQYQKAKGSESEVHCSTEDGSTLKTRPPRTMKQIEVDLNFTNFLGKTPPDIFAPPKSPKSLLLSENRPHCVTKLPEDCHYEPENLVKLFLLPDVKCLGRRMRKLSGVYTDGSTEQCNNNEPFNSWDNGSVCDGEYDDAHSDMDDSSTLISQPRQINKIEVQYDKTSKQVDVQALKLTLWNHIEEFVHLRFQGEKEMVSFRDILANFPSECNAAATVTDISPHLCFICLLHLANEKELSIQSCPDLDDLHIHMPT