Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25651.t1 | XP_013450325.1 | 97.9 | 438 | 6 | 1 | 1 | 438 | 1 | 435 | 6.70E-223 | 783.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25651.t1 | F4JI46 | 76.0 | 267 | 56 | 2 | 36 | 295 | 45 | 310 | 1.5e-109 | 397.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25651.t1 | G8A1A0 | 97.9 | 438 | 6 | 1 | 1 | 438 | 1 | 435 | 4.9e-223 | 783.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene25651 | 0.847292 | 1.27E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene25651 | 0.816405 | 5.62E-52 | -1.69E-46 |
| MS.gene049236 | MS.gene25651 | -0.819814 | 9.53E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene25651 | 0.826424 | 2.73E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene25651 | 0.826247 | 3.01E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene25651 | 0.833568 | 4.95E-56 | -1.69E-46 |
| MS.gene049427 | MS.gene25651 | 0.806456 | 8.16E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene25651 | 0.838058 | 3.60E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene25651 | 0.810218 | 1.29E-50 | -1.69E-46 |
| MS.gene049662 | MS.gene25651 | 0.80276 | 4.81E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene25651 | 0.809843 | 1.55E-50 | -1.69E-46 |
| MS.gene050353 | MS.gene25651 | -0.802289 | 6.02E-49 | -1.69E-46 |
| MS.gene050380 | MS.gene25651 | -0.831618 | 1.51E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene25651 | 0.81043 | 1.16E-50 | -1.69E-46 |
| MS.gene050499 | MS.gene25651 | 0.822178 | 2.72E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene25651 | 0.806441 | 8.22E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene25651 | 0.838724 | 2.43E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene25651 | 0.825657 | 4.16E-54 | -1.69E-46 |
| MS.gene050686 | MS.gene25651 | 0.821702 | 3.51E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene25651 | 0.808935 | 2.42E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene25651 | 0.842844 | 2.02E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene25651 | 0.800382 | 1.48E-48 | -1.69E-46 |
| MS.gene050971 | MS.gene25651 | 0.801778 | 7.67E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene25651 | 0.855324 | 6.81E-62 | -1.69E-46 |
| MS.gene051255 | MS.gene25651 | 0.82909 | 6.25E-55 | -1.69E-46 |
| MS.gene051360 | MS.gene25651 | 0.851348 | 9.41E-61 | -1.69E-46 |
| MS.gene051387 | MS.gene25651 | 0.829486 | 5.01E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene25651 | 0.820967 | 5.18E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene25651 | 0.834002 | 3.86E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene25651 | 0.831208 | 1.90E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene25651 | 0.873776 | 1.13E-67 | -1.69E-46 |
| MS.gene051877 | MS.gene25651 | 0.824175 | 9.31E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene25651 | 0.805362 | 1.38E-49 | -1.69E-46 |
| MS.gene052322 | MS.gene25651 | 0.800519 | 1.39E-48 | -1.69E-46 |
| MS.gene052379 | MS.gene25651 | 0.816937 | 4.27E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene25651 | 0.811473 | 6.88E-51 | -1.69E-46 |
| MS.gene052421 | MS.gene25651 | 0.808077 | 3.70E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene25651 | 0.829562 | 4.80E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene25651 | 0.868817 | 4.93E-66 | -1.69E-46 |
| MS.gene052485 | MS.gene25651 | 0.848316 | 6.62E-60 | -1.69E-46 |
| MS.gene052999 | MS.gene25651 | 0.805978 | 1.03E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene25651 | 0.801136 | 1.04E-48 | -1.69E-46 |
| MS.gene053104 | MS.gene25651 | 0.807983 | 3.87E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene25651 | 0.840726 | 7.31E-58 | -1.69E-46 |
| MS.gene053209 | MS.gene25651 | 0.83704 | 6.57E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene25651 | 0.809151 | 2.18E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene25651 | 0.812345 | 4.44E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene25651 | 0.830059 | 3.63E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene25651 | 0.832199 | 1.08E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene25651 | 0.804206 | 2.41E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene25651 | 0.810333 | 1.21E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene25651 | 0.824223 | 9.07E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene25651 | 0.805059 | 1.60E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene25651 | 0.836298 | 1.02E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene25651 | 0.834125 | 3.59E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene25651 | 0.804654 | 1.95E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene25651 | 0.844863 | 5.81E-59 | -1.69E-46 |
| MS.gene055277 | MS.gene25651 | 0.802393 | 5.73E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene25651 | 0.816709 | 4.81E-52 | -1.69E-46 |
| MS.gene055486 | MS.gene25651 | 0.822704 | 2.05E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene25651 | 0.80986 | 1.54E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene25651 | 0.808218 | 3.45E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene25651 | 0.805588 | 1.24E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene25651 | 0.858673 | 7.01E-63 | -1.69E-46 |
| MS.gene055909 | MS.gene25651 | 0.805168 | 1.52E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene25651 | 0.807578 | 4.72E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene25651 | 0.839506 | 1.52E-57 | -1.69E-46 |
| MS.gene055941 | MS.gene25651 | 0.823349 | 1.45E-53 | -1.69E-46 |
| MS.gene05602 | MS.gene25651 | 0.801028 | 1.09E-48 | -1.69E-46 |
| MS.gene056166 | MS.gene25651 | 0.803239 | 3.83E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene25651 | 0.820094 | 8.22E-53 | -1.69E-46 |
| MS.gene056410 | MS.gene25651 | 0.870816 | 1.10E-66 | -1.69E-46 |
| MS.gene056422 | MS.gene25651 | 0.829459 | 5.09E-55 | -1.69E-46 |
| MS.gene056448 | MS.gene25651 | 0.858216 | 9.59E-63 | -1.69E-46 |
| MS.gene056511 | MS.gene25651 | 0.848994 | 4.30E-60 | -1.69E-46 |
| MS.gene056611 | MS.gene25651 | 0.839088 | 1.95E-57 | -1.69E-46 |
| MS.gene056931 | MS.gene25651 | 0.801797 | 7.60E-49 | -1.69E-46 |
| MS.gene056935 | MS.gene25651 | 0.801551 | 8.54E-49 | -1.69E-46 |
| MS.gene056942 | MS.gene25651 | 0.816964 | 4.22E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene25651 | 0.819875 | 9.23E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene25651 | 0.806403 | 8.37E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene25651 | 0.85086 | 1.29E-60 | -1.69E-46 |
| MS.gene057285 | MS.gene25651 | 0.80879 | 2.60E-50 | -1.69E-46 |
| MS.gene057289 | MS.gene25651 | 0.806631 | 7.49E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene25651 | 0.822691 | 2.07E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene25651 | 0.821998 | 3.00E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene25651 | 0.825171 | 5.42E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene25651 | 0.813697 | 2.25E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene25651 | 0.819432 | 1.17E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene25651 | 0.803457 | 3.45E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene25651 | 0.832506 | 9.09E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene25651 | 0.817218 | 3.70E-52 | -1.69E-46 |
| MS.gene058376 | MS.gene25651 | 0.807188 | 5.71E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene25651 | 0.831269 | 1.84E-55 | -1.69E-46 |
| MS.gene058790 | MS.gene25651 | 0.815104 | 1.10E-51 | -1.69E-46 |
| MS.gene05883 | MS.gene25651 | 0.815142 | 1.08E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene25651 | -0.822817 | 1.93E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene25651 | 0.812322 | 4.50E-51 | -1.69E-46 |
| MS.gene059029 | MS.gene25651 | 0.82071 | 5.94E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene25651 | 0.80711 | 5.93E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene25651 | 0.824812 | 6.59E-54 | -1.69E-46 |
| MS.gene059455 | MS.gene25651 | 0.80288 | 4.55E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene25651 | 0.851047 | 1.14E-60 | -1.69E-46 |
| MS.gene059674 | MS.gene25651 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene059676 | MS.gene25651 | 0.809937 | 1.48E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene25651 | 0.843443 | 1.40E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene25651 | 0.826863 | 2.15E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene25651 | 0.829444 | 5.13E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene25651 | 0.854929 | 8.87E-62 | -1.69E-46 |
| MS.gene059718 | MS.gene25651 | 0.805687 | 1.18E-49 | -1.69E-46 |
| MS.gene059749 | MS.gene25651 | 0.819962 | 8.82E-53 | -1.69E-46 |
| MS.gene05986 | MS.gene25651 | 0.823545 | 1.31E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene25651 | 0.871724 | 5.50E-67 | -1.69E-46 |
| MS.gene060403 | MS.gene25651 | 0.814519 | 1.48E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene25651 | 0.845594 | 3.69E-59 | -1.69E-46 |
| MS.gene060666 | MS.gene25651 | 0.816073 | 6.67E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene25651 | 0.855257 | 7.12E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene25651 | 0.864847 | 9.06E-65 | -1.69E-46 |
| MS.gene060835 | MS.gene25651 | 0.821017 | 5.05E-53 | -1.69E-46 |
| MS.gene060837 | MS.gene25651 | 0.895189 | 1.21E-75 | -1.69E-46 |
| MS.gene06092 | MS.gene25651 | 0.802246 | 6.14E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene25651 | 0.812523 | 4.06E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene25651 | 0.831554 | 1.56E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25651.t1 | MTR_7g107560 | 97.945 | 438 | 6 | 1 | 1 | 438 | 1 | 435 | 0.0 | 880 |
| MS.gene25651.t1 | MTR_1g089500 | 64.667 | 450 | 98 | 10 | 40 | 438 | 44 | 483 | 0.0 | 538 |
| MS.gene25651.t1 | MTR_8g026680 | 67.766 | 273 | 80 | 3 | 35 | 307 | 87 | 351 | 1.53e-131 | 388 |
| MS.gene25651.t1 | MTR_7g104900 | 64.158 | 279 | 95 | 1 | 30 | 308 | 69 | 342 | 1.18e-125 | 373 |
| MS.gene25651.t1 | MTR_4g052850 | 64.286 | 266 | 86 | 1 | 28 | 293 | 66 | 322 | 5.87e-124 | 364 |
| MS.gene25651.t1 | MTR_2g086580 | 63.139 | 274 | 96 | 1 | 35 | 308 | 50 | 318 | 2.43e-120 | 358 |
| MS.gene25651.t1 | MTR_7g081615 | 88.125 | 160 | 17 | 1 | 102 | 261 | 14 | 171 | 5.02e-96 | 286 |
| MS.gene25651.t1 | MTR_5g064420 | 61.635 | 159 | 57 | 1 | 97 | 255 | 41 | 195 | 3.42e-63 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25651.t1 | AT4G03100 | 66.479 | 355 | 92 | 4 | 30 | 358 | 39 | 392 | 3.78e-161 | 461 |
| MS.gene25651.t1 | AT2G46710 | 67.586 | 290 | 86 | 5 | 35 | 320 | 77 | 362 | 4.71e-135 | 396 |
| MS.gene25651.t1 | AT5G22400 | 64.437 | 284 | 95 | 2 | 29 | 312 | 87 | 364 | 2.16e-129 | 382 |
| MS.gene25651.t1 | AT3G11490 | 60.606 | 297 | 107 | 3 | 35 | 327 | 69 | 359 | 2.53e-122 | 363 |
| MS.gene25651.t1 | AT1G08340 | 63.673 | 245 | 89 | 0 | 63 | 307 | 1 | 245 | 2.68e-113 | 336 |
Find 0 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAAAATGAAAAAAGA+GGG | + | 51723:5869-5888 | None:intergenic | 10.0% |
| !! | TAATTAAAAAATGAAAAAAG+AGG | + | 51723:5870-5889 | None:intergenic | 10.0% |
| !!! | AAAATTTTAATTATAGCAAT+TGG | + | 51723:5576-5595 | None:intergenic | 10.0% |
| !!! | CTAAAAAATTGAATTTTTTT+AGG | - | 51723:5173-5192 | MS.gene25651:intron | 10.0% |
| !!! | TTTTTAATTAATGAATTTTC+AGG | - | 51723:5880-5899 | MS.gene25651:CDS | 10.0% |
| !! | AAATGAAAAAGAAAAAAGTA+AGG | + | 51723:4926-4945 | None:intergenic | 15.0% |
| !! | AGTAAAAGTTAGTAATTAAA+TGG | - | 51723:5335-5354 | MS.gene25651:intron | 15.0% |
| !! | CAAAAACATTAAAACTTTAG+GGG | + | 51723:6451-6470 | None:intergenic | 20.0% |
| !! | GCAAAAACATTAAAACTTTA+GGG | + | 51723:6452-6471 | None:intergenic | 20.0% |
| !! | TGCAAAAACATTAAAACTTT+AGG | + | 51723:6453-6472 | None:intergenic | 20.0% |
| !!! | AACTTTTCATCATCAAATAA+AGG | + | 51723:5391-5410 | None:intergenic | 20.0% |
| !!! | AGGGAAAAATATTTTATAGT+TGG | + | 51723:5850-5869 | None:intergenic | 20.0% |
| !!! | AGTTTCTTTGATTTAATGAT+TGG | - | 51723:5523-5542 | MS.gene25651:intron | 20.0% |
| !!! | CATGATTTAATAATAGCTTT+TGG | + | 51723:5599-5618 | None:intergenic | 20.0% |
| !!! | GTTTCTTTGATTTAATGATT+GGG | - | 51723:5524-5543 | MS.gene25651:intron | 20.0% |
| !!! | TTTTGTAGTAACATTTCAAT+GGG | - | 51723:5136-5155 | MS.gene25651:intron | 20.0% |
| ! | AAGAAACTTATTGTAAGTAG+TGG | + | 51723:5511-5530 | None:intergenic | 25.0% |
| ! | ATCATTTACACACAAAAATG+TGG | + | 51723:6613-6632 | None:intergenic | 25.0% |
| ! | ATGATCATCATAATCTAACT+TGG | + | 51723:6968-6987 | None:intergenic | 25.0% |
| ! | ATGATGAAAAGTTTCCATAA+CGG | - | 51723:5398-5417 | MS.gene25651:intron | 25.0% |
| ! | ATTATAACAAAATGGATGCT+AGG | - | 51723:6194-6213 | MS.gene25651:CDS | 25.0% |
| ! | CAATGTTCTTATGATTCAAA+AGG | - | 51723:5713-5732 | MS.gene25651:CDS | 25.0% |
| ! | CTAAATTAGAAACCAACATT+TGG | + | 51723:5116-5135 | None:intergenic | 25.0% |
| ! | CTTAATTAAAGCATGGTTTA+GGG | - | 51723:6012-6031 | MS.gene25651:intron | 25.0% |
| ! | TGAAGAGGATTATAACAAAA+TGG | - | 51723:6186-6205 | MS.gene25651:CDS | 25.0% |
| ! | TTTCATATTATCCTTCAATG+AGG | - | 51723:5284-5303 | MS.gene25651:intron | 25.0% |
| ! | TTTCGTATAAATCCAGAAAA+TGG | - | 51723:5914-5933 | MS.gene25651:CDS | 25.0% |
| ! | TTTGTAGTAACATTTCAATG+GGG | - | 51723:5137-5156 | MS.gene25651:intron | 25.0% |
| !! | AAACTCGAGATTTTACTTAA+GGG | - | 51723:5063-5082 | MS.gene25651:CDS | 25.0% |
| !! | GTTTTGTAGTAACATTTCAA+TGG | - | 51723:5135-5154 | MS.gene25651:intron | 25.0% |
| !! | TTAGGGTAAGATTTTATTGT+TGG | - | 51723:5191-5210 | MS.gene25651:intron | 25.0% |
| !! | TTTTCAGTAAATTCATCACT+TGG | + | 51723:6816-6835 | None:intergenic | 25.0% |
| AAAGGCAAATCTCAATAACT+TGG | + | 51723:5373-5392 | None:intergenic | 30.0% | |
| AACTGAAAAAACCTCATTGA+AGG | + | 51723:5298-5317 | None:intergenic | 30.0% | |
| AGAATGCTTCTTAGAACAAT+TGG | - | 51723:7041-7060 | MS.gene25651:CDS | 30.0% | |
| AGAGCCTAATAAAATCATGT+GGG | - | 51723:6314-6333 | MS.gene25651:intron | 30.0% | |
| CAACAAGAAATGTATACTAG+CGG | - | 51723:6928-6947 | MS.gene25651:intron | 30.0% | |
| CAATGTACATCAATGTCATT+TGG | + | 51723:5983-6002 | None:intergenic | 30.0% | |
| CATGCATGTGTAATATATAC+AGG | + | 51723:6692-6711 | None:intergenic | 30.0% | |
| CTAACATGCTTAACATTTGT+AGG | + | 51723:4813-4832 | None:intergenic | 30.0% | |
| GCATTAAGCATAATTTCGTT+TGG | + | 51723:6663-6682 | None:intergenic | 30.0% | |
| GCTTAATTAAAGCATGGTTT+AGG | - | 51723:6011-6030 | MS.gene25651:intron | 30.0% | |
| GTGTCTTTACTTTCTATTGA+TGG | + | 51723:7222-7241 | None:intergenic | 30.0% | |
| TCACAAATCACATCAGAATA+TGG | + | 51723:5643-5662 | None:intergenic | 30.0% | |
| TGAATCAGCTTTGCTTAATT+GGG | - | 51723:6135-6154 | MS.gene25651:CDS | 30.0% | |
| TGACATTGATGTACATTGTT+TGG | - | 51723:5985-6004 | MS.gene25651:CDS | 30.0% | |
| TGCATTAGTAACAGAATAGT+GGG | + | 51723:5749-5768 | None:intergenic | 30.0% | |
| TTACTTAAGGGATCTAAATC+CGG | - | 51723:5075-5094 | MS.gene25651:CDS | 30.0% | |
| TTGAATCAGCTTTGCTTAAT+TGG | - | 51723:6134-6153 | MS.gene25651:CDS | 30.0% | |
| TTGTAAGTAGTGGCATAAAA+CGG | + | 51723:5501-5520 | None:intergenic | 30.0% | |
| ! | CAAACTCGAGATTTTACTTA+AGG | - | 51723:5062-5081 | MS.gene25651:CDS | 30.0% |
| ! | TATAGTTGGTTCACATAATC+TGG | + | 51723:5836-5855 | None:intergenic | 30.0% |
| !! | TCACGTTTGATCGTTTTAAT+GGG | - | 51723:4838-4857 | MS.gene25651:CDS | 30.0% |
| !! | TTAATGAATTTTCAGGCTGA+AGG | - | 51723:5887-5906 | MS.gene25651:CDS | 30.0% |
| !!! | GATCGTTTTAATGGGTTTTT+GGG | - | 51723:4846-4865 | MS.gene25651:CDS | 30.0% |
| !!! | TGATCGTTTTAATGGGTTTT+TGG | - | 51723:4845-4864 | MS.gene25651:CDS | 30.0% |
| !!! | TTCAATGAGGTTTTTTCAGT+TGG | - | 51723:5297-5316 | MS.gene25651:intron | 30.0% |
| AAATCCAGAAAATGGTGAAG+AGG | - | 51723:5922-5941 | MS.gene25651:CDS | 35.0% | |
| AAGCATACCTGAGTCATATT+TGG | + | 51723:6241-6260 | None:intergenic | 35.0% | |
| AAGTAAAGACACCAATGATG+TGG | - | 51723:7230-7249 | MS.gene25651:CDS | 35.0% | |
| AATCTCCATTGGATGATGAA+CGG | + | 51723:4784-4803 | None:intergenic | 35.0% | |
| AATTGCAGTGTTAGTGTGTT+TGG | - | 51723:5671-5690 | MS.gene25651:CDS | 35.0% | |
| AGTTTCCATAACGGTAATGT+AGG | - | 51723:5407-5426 | MS.gene25651:intron | 35.0% | |
| ATCTGATGAATGAGATGACA+TGG | + | 51723:6896-6915 | None:intergenic | 35.0% | |
| ATTGATGTACATTGTTTGGC+TGG | - | 51723:5989-6008 | MS.gene25651:CDS | 35.0% | |
| CAAATCCTACATTACCGTTA+TGG | + | 51723:5415-5434 | None:intergenic | 35.0% | |
| CACTATTCTGTTACTAATGC+AGG | - | 51723:5748-5767 | MS.gene25651:CDS | 35.0% | |
| CAGAGCCTAATAAAATCATG+TGG | - | 51723:6313-6332 | MS.gene25651:intron | 35.0% | |
| CATTTGGACTAACCAAATGT+TGG | - | 51723:5101-5120 | MS.gene25651:CDS | 35.0% | |
| CTGAGTTCCAGTTATAGAAA+CGG | - | 51723:7156-7175 | MS.gene25651:CDS | 35.0% | |
| CTGCATTAGTAACAGAATAG+TGG | + | 51723:5750-5769 | None:intergenic | 35.0% | |
| GCATAAAACATTCAAATCCG+AGG | + | 51723:6354-6373 | None:intergenic | 35.0% | |
| GCATTAGTAACAGAATAGTG+GGG | + | 51723:5748-5767 | None:intergenic | 35.0% | |
| GTTCACATAATCTGGAAAAC+TGG | + | 51723:5828-5847 | None:intergenic | 35.0% | |
| TAAAACGATCAAACGTGACA+TGG | + | 51723:4836-4855 | None:intergenic | 35.0% | |
| TAATTGGGCTGTTGATCTTA+TGG | - | 51723:6150-6169 | MS.gene25651:CDS | 35.0% | |
| TTACACACAAAAATGTGGAG+TGG | + | 51723:6608-6627 | None:intergenic | 35.0% | |
| ! | CAACATTTGGTTAGTCCAAA+TGG | + | 51723:5103-5122 | None:intergenic | 35.0% |
| ! | GGATCCCACATGATTTTATT+AGG | + | 51723:6321-6340 | None:intergenic | 35.0% |
| ! | GGGTAAGATTTTATTGTTGG+TGG | - | 51723:5194-5213 | MS.gene25651:intron | 35.0% |
| ! | GTCACGTTTGATCGTTTTAA+TGG | - | 51723:4837-4856 | MS.gene25651:CDS | 35.0% |
| ! | TTAAGCAAAGCTGATTCAAC+TGG | + | 51723:6133-6152 | None:intergenic | 35.0% |
| ! | TTTTGCTCCAAATATGACTC+AGG | - | 51723:6231-6250 | MS.gene25651:intron | 35.0% |
| !! | AGCTGCTTTGAAGAAATCAA+TGG | - | 51723:4719-4738 | MS.gene25651:CDS | 35.0% |
| ACATGAACTTCAAGCTCAAG+AGG | + | 51723:4876-4895 | None:intergenic | 40.0% | |
| ACTAACTGCTCTAATGCATG+CGG | - | 51723:6789-6808 | MS.gene25651:intron | 40.0% | |
| ATCAATGGTTGCTTGTAGTG+TGG | - | 51723:4734-4753 | MS.gene25651:CDS | 40.0% | |
| ATCATCCAATGGAGATTGGA+TGG | - | 51723:4787-4806 | MS.gene25651:CDS | 40.0% | |
| ATCTACCATCTCCACATCAT+TGG | + | 51723:7244-7263 | None:intergenic | 40.0% | |
| ATCTTGTGACTTCACGTAGT+CGG | + | 51723:6394-6413 | None:intergenic | 40.0% | |
| ATGCAGCTTCTTCAATGTTG+TGG | + | 51723:7002-7021 | None:intergenic | 40.0% | |
| ATGGTGAAGAGGAACATTTG+AGG | - | 51723:5933-5952 | MS.gene25651:CDS | 40.0% | |
| GATCTAAATCCGGTTCCATT+TGG | - | 51723:5085-5104 | MS.gene25651:CDS | 40.0% | |
| GGATGCTAGGAATATTGCTA+TGG | - | 51723:6207-6226 | MS.gene25651:CDS | 40.0% | |
| GTTCATCATCCAATGGAGAT+TGG | - | 51723:4783-4802 | MS.gene25651:CDS | 40.0% | |
| TAGATGAGATGACTCAAGCA+TGG | + | 51723:6479-6498 | None:intergenic | 40.0% | |
| TCTATAACTGGAACTCAGAC+AGG | + | 51723:7154-7173 | None:intergenic | 40.0% | |
| TGGTGAAGAGGAACATTTGA+GGG | - | 51723:5934-5953 | MS.gene25651:CDS | 40.0% | |
| TTCTGTTACTAATGCAGGAG+AGG | - | 51723:5753-5772 | MS.gene25651:CDS | 40.0% | |
| TTGAGGGAGCAATTGAATAG+TGG | - | 51723:5950-5969 | MS.gene25651:CDS | 40.0% | |
| TTGCATTCAAGAACTTCCTC+AGG | + | 51723:6070-6089 | None:intergenic | 40.0% | |
| ! | AAAGTAAGGTACCTAGCACT+AGG | + | 51723:4912-4931 | None:intergenic | 40.0% |
| ! | TGTTCCTCTTCACCATTTTC+TGG | + | 51723:5929-5948 | None:intergenic | 40.0% |
| ! | TTGGTTAGTCCAAATGGAAC+CGG | + | 51723:5097-5116 | None:intergenic | 40.0% |
| !! | TGGAGATTATCAGTTGGTGA+TGG | + | 51723:4998-5017 | None:intergenic | 40.0% |
| !! | TGGCTGGCTTAATTAAAGCA+TGG | - | 51723:6005-6024 | MS.gene25651:intron | 40.0% |
| AATCTCGAGTTTGAGCAGTG+CGG | + | 51723:5055-5074 | None:intergenic | 45.0% | |
| ACCAACTGATAATCTCCACC+GGG | - | 51723:5000-5019 | MS.gene25651:CDS | 45.0% | |
| ACTTCACGTAGTCGGTATAC+GGG | + | 51723:6386-6405 | None:intergenic | 45.0% | |
| AGACACCAATGATGTGGAGA+TGG | - | 51723:7236-7255 | MS.gene25651:CDS | 45.0% | |
| AGAGAGTCCTACCAAAACTG+AGG | - | 51723:7125-7144 | MS.gene25651:CDS | 45.0% | |
| AGTAGTGTGAAGGGAAGAAG+AGG | - | 51723:4651-4670 | MS.gene25651:CDS | 45.0% | |
| AGTCCATCTAACACTCCTGA+AGG | + | 51723:6043-6062 | None:intergenic | 45.0% | |
| ATACTCACAGGGAGGACTAA+AGG | - | 51723:5778-5797 | MS.gene25651:CDS | 45.0% | |
| CAAATCCGAGGTTGACGATT+TGG | + | 51723:6342-6361 | None:intergenic | 45.0% | |
| CACCAACTGATAATCTCCAC+CGG | - | 51723:4999-5018 | MS.gene25651:CDS | 45.0% | |
| CAGGAGAGGTTATACTCACA+GGG | - | 51723:5767-5786 | MS.gene25651:CDS | 45.0% | |
| GACTTCACGTAGTCGGTATA+CGG | + | 51723:6387-6406 | None:intergenic | 45.0% | |
| GCATGCATTAGAGCAGTTAG+TGG | + | 51723:6790-6809 | None:intergenic | 45.0% | |
| GGCTGATGTTGTAGTTGAAG+AGG | - | 51723:6171-6190 | MS.gene25651:CDS | 45.0% | |
| GGGGTGAGTTTGACAGATTT+AGG | + | 51723:6432-6451 | None:intergenic | 45.0% | |
| TCTTCTTGCAAATGCTCTGC+AGG | + | 51723:7102-7121 | None:intergenic | 45.0% | |
| TGGTTTAGGGAACTTCCTTC+AGG | - | 51723:6025-6044 | MS.gene25651:intron | 45.0% | |
| TGTCGAGCCGTTTCTATAAC+TGG | + | 51723:7166-7185 | None:intergenic | 45.0% | |
| ! | CAGACAGGAATCCTCAGTTT+TGG | + | 51723:7139-7158 | None:intergenic | 45.0% |
| ! | GTTAGATGGACTTTCACCTG+AGG | - | 51723:6051-6070 | MS.gene25651:intron | 45.0% |
| !! | CAGGAATCCTCAGTTTTGGT+AGG | + | 51723:7135-7154 | None:intergenic | 45.0% |
| !! | CTTCCTTCAGGAGTGTTAGA+TGG | - | 51723:6037-6056 | MS.gene25651:intron | 45.0% |
| !!! | TAAAAAATTGAATTTTTTTA+GGG | - | 51723:5174-5193 | MS.gene25651:intron | 5.0% |
| AAACGGCTCGACAACAACTG+AGG | - | 51723:7173-7192 | MS.gene25651:CDS | 50.0% | |
| AACGGCTCGACAACAACTGA+GGG | - | 51723:7174-7193 | MS.gene25651:CDS | 50.0% | |
| AGGCTCTGCGATTTCTTGCA+GGG | + | 51723:6301-6320 | None:intergenic | 50.0% | |
| AGGTACCTAGCACTAGGAAC+AGG | + | 51723:4906-4925 | None:intergenic | 50.0% | |
| CTCCATTGGATGATGAACGG+CGG | + | 51723:4781-4800 | None:intergenic | 50.0% | |
| GAGAGGTTATACTCACAGGG+AGG | - | 51723:5770-5789 | MS.gene25651:CDS | 50.0% | |
| GCAGCTAACATTAACGCTGC+TGG | + | 51723:4705-4724 | None:intergenic | 50.0% | |
| GCAGGAGAGGTTATACTCAC+AGG | - | 51723:5766-5785 | MS.gene25651:CDS | 50.0% | |
| GCAGTGCGGATGAAAGTAGT+CGG | + | 51723:5041-5060 | None:intergenic | 50.0% | |
| GGAAGAAGAGGAAGCAGAGA+CGG | - | 51723:4663-4682 | MS.gene25651:CDS | 50.0% | |
| GGGATCCAAATCGTCAACCT+CGG | - | 51723:6334-6353 | MS.gene25651:intron | 50.0% | |
| GTAGGCCATCCAATCTCCAT+TGG | + | 51723:4795-4814 | None:intergenic | 50.0% | |
| TAGGCTCTGCGATTTCTTGC+AGG | + | 51723:6302-6321 | None:intergenic | 50.0% | |
| TCCCGGTGGAGATTATCAGT+TGG | + | 51723:5004-5023 | None:intergenic | 50.0% | |
| ! | GGTGGTGGTAGTAGTGTGAA+GGG | - | 51723:4642-4661 | MS.gene25651:CDS | 50.0% |
| !! | CTGCTGTTGCTGTTTCTTCG+CGG | + | 51723:6864-6883 | None:intergenic | 50.0% |
| AAAGTAGTCGGTGGCCAGTC+AGG | + | 51723:5029-5048 | None:intergenic | 55.0% | |
| ACGGCGGAGATTACATCGTC+AGG | + | 51723:4765-4784 | None:intergenic | 55.0% | |
| AGAAGAGGAAGCAGAGACGG+CGG | - | 51723:4666-4685 | MS.gene25651:CDS | 55.0% | |
| CATCCACCACTCACCATCAC+TGG | + | 51723:4621-4640 | None:intergenic | 55.0% | |
| CTAGCACTAGGAACAGGAGC+AGG | + | 51723:4900-4919 | None:intergenic | 55.0% | |
| CTCCGCCGTTCATCATCCAA+TGG | - | 51723:4776-4795 | MS.gene25651:CDS | 55.0% | |
| CTGCTCCTGTTCCTAGTGCT+AGG | - | 51723:4898-4917 | MS.gene25651:CDS | 55.0% | |
| GGCTCTGCGATTTCTTGCAG+GGG | + | 51723:6300-6319 | None:intergenic | 55.0% | |
| GTGCGGATGAAAGTAGTCGG+TGG | + | 51723:5038-5057 | None:intergenic | 55.0% | |
| ! | AGAGGACCAGTGATGGTGAG+TGG | - | 51723:4612-4631 | MS.gene25651:CDS | 55.0% |
| ! | CGGTGGTGGTAGTAGTGTGA+AGG | - | 51723:4641-4660 | MS.gene25651:CDS | 55.0% |
| !! | GTGATGGTGAGTGGTGGATG+CGG | - | 51723:4621-4640 | MS.gene25651:CDS | 55.0% |
| AAGAGGAAGCAGAGACGGCG+GGG | - | 51723:4668-4687 | MS.gene25651:CDS | 60.0% | |
| GAAGAGGAAGCAGAGACGGC+GGG | - | 51723:4667-4686 | MS.gene25651:CDS | 60.0% | |
| TCTCCACCGGGAAACCTGAC+TGG | - | 51723:5012-5031 | MS.gene25651:CDS | 60.0% | |
| ! | GGACCAGTGATGGTGAGTGG+TGG | - | 51723:4615-4634 | MS.gene25651:CDS | 60.0% |
| !! | ATGGTGAGTGGTGGATGCGG+TGG | - | 51723:4624-4643 | MS.gene25651:CDS | 60.0% |
| CGGTGGCCAGTCAGGTTTCC+CGG | + | 51723:5021-5040 | None:intergenic | 65.0% | |
| TGGCCAGTCAGGTTTCCCGG+TGG | + | 51723:5018-5037 | None:intergenic | 65.0% | |
| !! | GTGAGTGGTGGATGCGGTGG+TGG | - | 51723:4627-4646 | MS.gene25651:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51723 | gene | 4609 | 7311 | 4609 | ID=MS.gene25651 |
| 51723 | mRNA | 4609 | 7311 | 4609 | ID=MS.gene25651.t1;Parent=MS.gene25651 |
| 51723 | exon | 7001 | 7311 | 7001 | ID=MS.gene25651.t1.exon1;Parent=MS.gene25651.t1 |
| 51723 | CDS | 7001 | 7311 | 7001 | ID=cds.MS.gene25651.t1;Parent=MS.gene25651.t1 |
| 51723 | exon | 6121 | 6241 | 6121 | ID=MS.gene25651.t1.exon2;Parent=MS.gene25651.t1 |
| 51723 | CDS | 6121 | 6241 | 6121 | ID=cds.MS.gene25651.t1;Parent=MS.gene25651.t1 |
| 51723 | exon | 5668 | 6018 | 5668 | ID=MS.gene25651.t1.exon3;Parent=MS.gene25651.t1 |
| 51723 | CDS | 5668 | 6018 | 5668 | ID=cds.MS.gene25651.t1;Parent=MS.gene25651.t1 |
| 51723 | exon | 4609 | 5142 | 4609 | ID=MS.gene25651.t1.exon4;Parent=MS.gene25651.t1 |
| 51723 | CDS | 4609 | 5142 | 4609 | ID=cds.MS.gene25651.t1;Parent=MS.gene25651.t1 |
| Gene Sequence |
| Protein sequence |
