Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060843.t1 | KEH28672.1 | 95.4 | 65 | 3 | 0 | 1 | 65 | 1 | 65 | 1.00E-26 | 131 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060843.t1 | A0A072UG52 | 95.4 | 65 | 3 | 0 | 1 | 65 | 1 | 65 | 7.3e-27 | 131.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052190 | MS.gene060843 | 0.80406 | 2.59E-49 | -1.69E-46 |
| MS.gene060843 | MS.gene060844 | 0.914264 | 2.35E-84 | -1.69E-46 |
| MS.gene060843 | MS.gene060845 | 0.877074 | 8.41E-69 | -1.69E-46 |
| MS.gene060843 | MS.gene072397 | -0.805685 | 1.18E-49 | -1.69E-46 |
| MS.gene060843 | MS.gene32747 | 0.810386 | 1.18E-50 | -1.69E-46 |
| MS.gene060843 | MS.gene35252 | 0.801448 | 8.96E-49 | -1.69E-46 |
| MS.gene060843 | MS.gene35254 | 0.801777 | 7.67E-49 | -1.69E-46 |
| MS.gene060843 | MS.gene41240 | 0.811325 | 7.41E-51 | -1.69E-46 |
| MS.gene060843 | MS.gene61716 | 0.873867 | 1.05E-67 | -1.69E-46 |
| MS.gene060843 | MS.gene68333 | 0.806902 | 6.57E-50 | -1.69E-46 |
| MS.gene060843 | MS.gene85567 | 0.803819 | 2.91E-49 | -1.69E-46 |
| MS.gene060843 | MS.gene96246 | 0.805718 | 1.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060843.t1 | MTR_4g009870 | 97.179 | 319 | 9 | 0 | 1 | 319 | 1 | 319 | 0.0 | 605 |
| MS.gene060843.t1 | MTR_4g009870 | 70.846 | 319 | 68 | 1 | 1 | 294 | 1 | 319 | 1.27e-147 | 418 |
| MS.gene060843.t1 | MTR_4g009870 | 50.554 | 271 | 133 | 1 | 50 | 319 | 1 | 271 | 3.58e-70 | 221 |
| MS.gene060843.t1 | MTR_4g116170 | 67.398 | 319 | 104 | 0 | 1 | 319 | 197 | 515 | 2.59e-132 | 388 |
| MS.gene060843.t1 | MTR_4g116170 | 29.187 | 209 | 145 | 3 | 102 | 307 | 127 | 335 | 1.42e-11 | 65.5 |
| MS.gene060843.t1 | MTR_8g099415 | 29.178 | 353 | 193 | 11 | 6 | 304 | 133 | 482 | 1.13e-15 | 77.8 |
| MS.gene060843.t1 | MTR_8g099415 | 29.904 | 311 | 175 | 10 | 30 | 310 | 83 | 380 | 3.53e-12 | 67.4 |
| MS.gene060843.t1 | MTR_8g099415 | 29.429 | 350 | 190 | 11 | 9 | 304 | 136 | 482 | 1.27e-15 | 77.8 |
| MS.gene060843.t1 | MTR_8g099415 | 29.904 | 311 | 175 | 10 | 30 | 310 | 83 | 380 | 3.24e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060843.t1 | AT1G15740 | 72.812 | 320 | 86 | 1 | 1 | 319 | 205 | 524 | 1.54e-141 | 412 |
| MS.gene060843.t1 | AT1G15740 | 28.933 | 356 | 188 | 6 | 4 | 304 | 92 | 437 | 2.73e-18 | 85.9 |
| MS.gene060843.t1 | AT1G15740 | 37.363 | 182 | 107 | 6 | 140 | 316 | 149 | 328 | 5.80e-13 | 69.7 |
| MS.gene060843.t1 | AT1G15740 | 30.328 | 244 | 122 | 4 | 4 | 199 | 330 | 573 | 1.98e-11 | 65.1 |
| MS.gene060843.t1 | AT4G23840 | 26.098 | 410 | 196 | 10 | 1 | 304 | 79 | 487 | 1.61e-17 | 83.6 |
Find 70 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGCTTGGATTCACTTTC+AGG | 0.068243 | 4.3:+83586990 | MS.gene060843:CDS |
| ATCTCTGAAGTCTCTTAATT+TGG | 0.152359 | 4.3:+83589688 | MS.gene060843:CDS |
| TGTAGTAAAGTCACTGATTT+TGG | 0.168024 | 4.3:+83586343 | MS.gene060843:CDS |
| GAAGCTTGCCCTCTTAAATT+TGG | 0.198047 | 4.3:+83586947 | MS.gene060843:CDS |
| TTGTTAGTGACAGTGGTTTA+AGG | 0.217027 | 4.3:+83589648 | MS.gene060843:CDS |
| CTCACTGACCTTGATTTGTT+TGG | 0.245633 | 4.3:+83590441 | MS.gene060843:CDS |
| TTAAGCAGGATTGACAAAAT+TGG | 0.248392 | 4.3:+83588306 | MS.gene060843:intron |
| CTTCTCTGGTCTTGTTAACT+TGG | 0.285104 | 4.3:+83585481 | MS.gene060843:CDS |
| CCAGTCCAGCATCAGTAATT+TGG | 0.287315 | 4.3:-83589718 | None:intergenic |
| TCCGATATGAAGCCTTTATC+AGG | 0.299738 | 4.3:+83585849 | MS.gene060843:CDS |
| AATGGCCTAGAGCATTTATC+AGG | 0.312464 | 4.3:+83589058 | MS.gene060843:CDS |
| TAACTTGGTCAAGTTGGATT+TGG | 0.325759 | 4.3:+83585496 | MS.gene060843:CDS |
| GAGAGATGTCCTGGGATTCA+TGG | 0.355408 | 4.3:+83585518 | MS.gene060843:CDS |
| TTTGCTGATGCAGGTTTGAC+TGG | 0.365454 | 4.3:+83590417 | MS.gene060843:intron |
| TTGGATTTGGAGAGATGTCC+TGG | 0.400413 | 4.3:+83585509 | MS.gene060843:CDS |
| AACCTTGATTCATGTAAGAT+TGG | 0.403335 | 4.3:+83588337 | MS.gene060843:CDS |
| AGATGCAACAAACCTGATAA+AGG | 0.406288 | 4.3:-83585861 | None:intergenic |
| CCAAATTACTGATGCTGGAC+TGG | 0.409005 | 4.3:+83589718 | MS.gene060843:CDS |
| TCTTGTAACATCTGCATGCT+TGG | 0.409080 | 4.3:+83586977 | MS.gene060843:CDS |
| TCTTGTAGGATTGTCTAGTC+TGG | 0.424185 | 4.3:+83589601 | MS.gene060843:intron |
| TTTCTGACAGAGGGTGTGAT+AGG | 0.424800 | 4.3:+83587874 | MS.gene060843:CDS |
| CAAGGAATGAGTGCCTTCTC+TGG | 0.429753 | 4.3:+83585467 | None:intergenic |
| GACACCCTTCCAAATTTAAG+AGG | 0.430139 | 4.3:-83586956 | None:intergenic |
| ACCTGATAAAGGCTTCATAT+CGG | 0.443237 | 4.3:-83585850 | None:intergenic |
| AGATTCAAGTTTGACAGTGC+AGG | 0.445204 | 4.3:-83587837 | None:intergenic |
| AAAGTTGAAAGTATTAAACT+TGG | 0.469983 | 4.3:+83588059 | MS.gene060843:CDS |
| AAAACTGTGGAGTTAATTGC+TGG | 0.470627 | 4.3:+83591169 | MS.gene060843:CDS |
| ATTCAAGAATCTGAGGTCCT+TGG | 0.471185 | 4.3:+83591045 | MS.gene060843:CDS |
| GCTTACCAAATTACTGATGC+TGG | 0.472779 | 4.3:+83589713 | MS.gene060843:CDS |
| TCTTGTTAACTTGGTCAAGT+TGG | 0.476241 | 4.3:+83585490 | MS.gene060843:CDS |
| ATCACAGAACAGCAACCTTA+CGG | 0.480947 | 4.3:+83591144 | MS.gene060843:CDS |
| GAATTGTCTGATACTGAAGT+TGG | 0.487539 | 4.3:+83589031 | MS.gene060843:CDS |
| GCGCTAGGATCACAGATGTT+GGG | 0.491382 | 4.3:+83590463 | MS.gene060843:CDS |
| ACCTTGATTTGTTTGGCGCT+AGG | 0.494505 | 4.3:+83590448 | MS.gene060843:CDS |
| TCATAAGCAATTGATCTGCT+TGG | 0.506112 | 4.3:+83589009 | MS.gene060843:CDS |
| GGCGCTAGGATCACAGATGT+TGG | 0.508377 | 4.3:+83590462 | MS.gene060843:CDS |
| TTCACTGTTGTTAGTGACAG+TGG | 0.508517 | 4.3:+83589641 | MS.gene060843:CDS |
| CACCAATCTTACATGAATCA+AGG | 0.510275 | 4.3:-83588339 | None:intergenic |
| TGATGAAGGATTGGTGAACT+TGG | 0.515944 | 4.3:+83588360 | MS.gene060843:CDS |
| GATTCAAGTTTGACAGTGCA+GGG | 0.517023 | 4.3:-83587836 | None:intergenic |
| CTTGCCCTCTTAAATTTGGA+AGG | 0.517960 | 4.3:+83586951 | MS.gene060843:CDS |
| CATGGGAACACATACTTGCA+AGG | 0.524260 | 4.3:-83589745 | None:intergenic |
| TCCTAGCGCCAAACAAATCA+AGG | 0.529517 | 4.3:-83590449 | None:intergenic |
| TCATGTAAGATTGGTGATGA+AGG | 0.532453 | 4.3:+83588346 | MS.gene060843:CDS |
| GAAGGATTGGTGAACTTGGC+AGG | 0.535990 | 4.3:+83588364 | MS.gene060843:CDS |
| TCAAACCTGATAAATGCTCT+AGG | 0.548354 | 4.3:-83589063 | None:intergenic |
| AAGTTGAAAGTATTAAACTT+GGG | 0.557845 | 4.3:+83588060 | MS.gene060843:CDS |
| GCATGTTTAGCTCATTTGAA+AGG | 0.558223 | 4.3:+83588102 | MS.gene060843:CDS |
| ATGGGAACACATACTTGCAA+GGG | 0.563020 | 4.3:-83589744 | None:intergenic |
| CAAGTTAACAAGACCAGAGA+AGG | 0.565092 | 4.3:-83585480 | None:intergenic |
| TAAGATTGGTGATGAAGGAT+TGG | 0.567788 | 4.3:+83588351 | MS.gene060843:CDS |
| AGCGGTGGATTGACTGATGC+TGG | 0.575698 | 4.3:+83591076 | MS.gene060843:CDS |
| TTGCCCTCTTAAATTTGGAA+GGG | 0.576199 | 4.3:+83586952 | MS.gene060843:CDS |
| AACTTGGGATTTAATGACAT+AGG | 0.577016 | 4.3:+83588075 | MS.gene060843:CDS |
| AAACAGAATTCAAGAATCTG+AGG | 0.586780 | 4.3:+83591038 | MS.gene060843:intron |
| ACAGTGCCTCCATGAATCCC+AGG | 0.590376 | 4.3:-83585527 | None:intergenic |
| TGGATTTGGAGAGATGTCCT+GGG | 0.594319 | 4.3:+83585510 | MS.gene060843:CDS |
| ACACCCTTCCAAATTTAAGA+GGG | 0.605875 | 4.3:-83586955 | None:intergenic |
| GATGCAATATTTCTGACAGA+GGG | 0.606799 | 4.3:+83587865 | MS.gene060843:CDS |
| TGGAATCTCTCAATATGAAG+TGG | 0.616270 | 4.3:+83585808 | MS.gene060843:CDS |
| TCCACCGCTGCATATTTCCA+AGG | 0.622364 | 4.3:-83591062 | None:intergenic |
| GATACTGAAGTTGGAAACAA+TGG | 0.628892 | 4.3:+83589040 | MS.gene060843:CDS |
| TCCTTGGAAATATGCAGCGG+TGG | 0.643300 | 4.3:+83591061 | MS.gene060843:CDS |
| ACTGTCACTAACAACAGTGA+AGG | 0.649551 | 4.3:-83589639 | None:intergenic |
| AGATGCAATATTTCTGACAG+AGG | 0.657280 | 4.3:+83587864 | MS.gene060843:CDS |
| CAACCTTACGGACAAAACTG+TGG | 0.677276 | 4.3:+83591156 | MS.gene060843:CDS |
| AGGTCCTTGGAAATATGCAG+CGG | 0.704864 | 4.3:+83591058 | MS.gene060843:CDS |
| AGATGTCCTGGGATTCATGG+AGG | 0.711361 | 4.3:+83585521 | MS.gene060843:CDS |
| AGTGGTTTAAGGAAATTGTG+TGG | 0.713167 | 4.3:+83589659 | MS.gene060843:CDS |
| CAAACAAATCAAGGTCAGTG+AGG | 0.728596 | 4.3:-83590440 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATATGAAAAGAATG+TGG | + | chr4.3:83590177-83590196 | MS.gene060843:intron | 15.0% |
| !! | AAAATAGAAATTGATAGATT+AGG | + | chr4.3:83588454-83588473 | MS.gene060843:intron | 15.0% |
| !! | AAATTCAATCTTAATAATTG+TGG | + | chr4.3:83590911-83590930 | MS.gene060843:intron | 15.0% |
| !! | AACATTCAAAAAAAAAGAAA+AGG | - | chr4.3:83589841-83589860 | None:intergenic | 15.0% |
| !! | AACTTAAGTAAGAAAAATAT+CGG | + | chr4.3:83587272-83587291 | MS.gene060843:intron | 15.0% |
| !! | ACAATTATTAAGATTGAATT+TGG | - | chr4.3:83590912-83590931 | None:intergenic | 15.0% |
| !! | ATTCTTAGAAAATATTACTA+AGG | + | chr4.3:83586776-83586795 | MS.gene060843:intron | 15.0% |
| !! | GTATAATTACATAATTTACA+GGG | + | chr4.3:83587941-83587960 | MS.gene060843:intron | 15.0% |
| !! | TAAAAAAAAAAAATGTAAGC+TGG | + | chr4.3:83588866-83588885 | MS.gene060843:intron | 15.0% |
| !! | TAATGCTAATAAAAAAGAAA+AGG | - | chr4.3:83587473-83587492 | None:intergenic | 15.0% |
| !!! | AAAATTTTGTTTCCAATATT+GGG | + | chr4.3:83587417-83587436 | MS.gene060843:intron | 15.0% |
| !!! | AATCTAAAGAATGATTTTAT+TGG | + | chr4.3:83588934-83588953 | MS.gene060843:intron | 15.0% |
| !!! | TTCATTTAAATTAGTTTTCT+CGG | + | chr4.3:83587347-83587366 | MS.gene060843:intron | 15.0% |
| !!! | TTTTATATTCTATTTCTTGT+AGG | + | chr4.3:83589512-83589531 | MS.gene060843:intron | 15.0% |
| !! | AAAGAAAGAAATTTATTGTC+TGG | - | chr4.3:83588702-83588721 | None:intergenic | 20.0% |
| !! | AAATTCAAATAATTTATCCC+AGG | - | chr4.3:83590328-83590347 | None:intergenic | 20.0% |
| !! | AAGAAAGAAATTTATTGTCT+GGG | - | chr4.3:83588701-83588720 | None:intergenic | 20.0% |
| !! | ACTTAAGTAAGAAAAATATC+GGG | + | chr4.3:83587273-83587292 | MS.gene060843:intron | 20.0% |
| !! | AGCAAACAAAAATAAGTAAA+AGG | - | chr4.3:83590598-83590617 | None:intergenic | 20.0% |
| !! | ATAAAAAAGCTGAAATATGT+TGG | + | chr4.3:83590623-83590642 | MS.gene060843:intron | 20.0% |
| !! | ATAACTTCAATCAAACTATT+TGG | + | chr4.3:83585759-83585778 | MS.gene060843:intron | 20.0% |
| !! | ATACATTATGTTTGGATTAA+TGG | - | chr4.3:83588810-83588829 | None:intergenic | 20.0% |
| !! | ATAGGAATTGTATTTGAAAA+TGG | + | chr4.3:83588252-83588271 | MS.gene060843:intron | 20.0% |
| !! | ATATTAAATCAAAACTCCAA+TGG | - | chr4.3:83587794-83587813 | None:intergenic | 20.0% |
| !! | GGTATAATTACATAATTTAC+AGG | + | chr4.3:83587940-83587959 | MS.gene060843:intron | 20.0% |
| !! | TAGAAAGCAATATAGAAATA+CGG | + | chr4.3:83588563-83588582 | MS.gene060843:intron | 20.0% |
| !! | TATAAAATTACCTGTGTAAT+AGG | - | chr4.3:83590082-83590101 | None:intergenic | 20.0% |
| !! | TATTAAATCAAAACTCCAAT+GGG | - | chr4.3:83587793-83587812 | None:intergenic | 20.0% |
| !! | TTAATCCAAACATAATGTAT+TGG | + | chr4.3:83588810-83588829 | MS.gene060843:intron | 20.0% |
| !!! | AAACAATTTATGAGTTTGTT+TGG | + | chr4.3:83590109-83590128 | MS.gene060843:intron | 20.0% |
| !!! | AAACTTTTTTGTTTACACAA+AGG | - | chr4.3:83585581-83585600 | None:intergenic | 20.0% |
| !!! | AAAGTTGAAAGTATTAAACT+TGG | + | chr4.3:83588059-83588078 | MS.gene060843:CDS | 20.0% |
| !!! | AAATTTTGTTTCCAATATTG+GGG | + | chr4.3:83587418-83587437 | MS.gene060843:intron | 20.0% |
| !!! | AAGTTGAAAGTATTAAACTT+GGG | + | chr4.3:83588060-83588079 | MS.gene060843:CDS | 20.0% |
| !!! | ACTTATGTATATTTTTAAGC+AGG | + | chr4.3:83588292-83588311 | MS.gene060843:intron | 20.0% |
| !!! | AGTTATGAAGAAATCAATTT+TGG | - | chr4.3:83585745-83585764 | None:intergenic | 20.0% |
| !!! | CAAAATTTTGTTTCCAATAT+TGG | + | chr4.3:83587416-83587435 | MS.gene060843:intron | 20.0% |
| !!! | CAATATTGGAAACAAAATTT+TGG | - | chr4.3:83587418-83587437 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTGAATGTTGAA+TGG | + | chr4.3:83589844-83589863 | MS.gene060843:intron | 20.0% |
| !!! | TAAATATTTACTTCCTTTTC+CGG | + | chr4.3:83589892-83589911 | MS.gene060843:intron | 20.0% |
| !!! | TCATTTAAATTAGTTTTCTC+GGG | + | chr4.3:83587348-83587367 | MS.gene060843:intron | 20.0% |
| ! | AAAATAAGTAAAAGGCCAAA+CGG | - | chr4.3:83590590-83590609 | None:intergenic | 25.0% |
| ! | AAGAAAAGGTTAATACTGTA+TGG | - | chr4.3:83587459-83587478 | None:intergenic | 25.0% |
| ! | AAGAAGACAATAACCTAAAT+AGG | - | chr4.3:83585984-83586003 | None:intergenic | 25.0% |
| ! | AATACTGTATGGACAATATT+GGG | - | chr4.3:83587448-83587467 | None:intergenic | 25.0% |
| ! | AATTGCACTAAATTCTTGTT+AGG | + | chr4.3:83587076-83587095 | MS.gene060843:intron | 25.0% |
| ! | ACAAACTACTGGTAAAATAA+CGG | + | chr4.3:83588193-83588212 | MS.gene060843:intron | 25.0% |
| ! | ATAGGCTTAAAATTCTATGA+AGG | - | chr4.3:83587023-83587042 | None:intergenic | 25.0% |
| ! | CATAAACTAATCTCTTGAAA+TGG | + | chr4.3:83589357-83589376 | MS.gene060843:intron | 25.0% |
| ! | CATAACAAAATAACCAGAAT+AGG | - | chr4.3:83587041-83587060 | None:intergenic | 25.0% |
| ! | CTTAAGTAAGAAAAATATCG+GGG | + | chr4.3:83587274-83587293 | MS.gene060843:intron | 25.0% |
| ! | CTTGTGATTATAAAGTAACA+AGG | - | chr4.3:83589324-83589343 | None:intergenic | 25.0% |
| ! | GAAGAAATAGGAATAGAAAT+GGG | - | chr4.3:83588776-83588795 | None:intergenic | 25.0% |
| ! | TAATACTGTATGGACAATAT+TGG | - | chr4.3:83587449-83587468 | None:intergenic | 25.0% |
| ! | TGGCATATAATAACTTAATG+AGG | + | chr4.3:83587759-83587778 | MS.gene060843:intron | 25.0% |
| ! | TTAAGTAAGAAAAATATCGG+GGG | + | chr4.3:83587275-83587294 | MS.gene060843:intron | 25.0% |
| ! | TTGTCATAGAAATATTTGTG+TGG | + | chr4.3:83587311-83587330 | MS.gene060843:intron | 25.0% |
| ! | TTTGAAGGTTGTATAATAAC+TGG | - | chr4.3:83585639-83585658 | None:intergenic | 25.0% |
| !! | AAATATTTACTTCCTTTTCC+GGG | + | chr4.3:83589893-83589912 | MS.gene060843:intron | 25.0% |
| !! | ACATATTGACTACATTTATG+TGG | + | chr4.3:83590554-83590573 | MS.gene060843:intron | 25.0% |
| !! | ATAGAATTTTAAGCCTATTC+TGG | + | chr4.3:83587025-83587044 | MS.gene060843:intron | 25.0% |
| !! | ATGATTTTATACCTTGAAAC+AGG | - | chr4.3:83590032-83590051 | None:intergenic | 25.0% |
| !! | ATTGTCTTACACTAGTTTAT+AGG | + | chr4.3:83586438-83586457 | MS.gene060843:intron | 25.0% |
| !! | GGTTATATTCTATTTCTTGT+AGG | + | chr4.3:83589587-83589606 | MS.gene060843:intron | 25.0% |
| !! | TATTTGAAAAGTATGCAACA+TGG | + | chr4.3:83590492-83590511 | MS.gene060843:intron | 25.0% |
| !!! | ATGTTTAGCTTGAAACAAAA+AGG | + | chr4.3:83586529-83586548 | MS.gene060843:intron | 25.0% |
| !!! | ATGTTTGGATTAATGGATTT+GGG | - | chr4.3:83588803-83588822 | None:intergenic | 25.0% |
| !!! | ATTAATGGTTTTACATGAGA+CGG | - | chr4.3:83590831-83590850 | None:intergenic | 25.0% |
| !!! | ATTCTAAAGCTAATTCTTTC+AGG | + | chr4.3:83587918-83587937 | MS.gene060843:intron | 25.0% |
| !!! | CTATTTGGTTCATATTTTTC+AGG | + | chr4.3:83585774-83585793 | MS.gene060843:intron | 25.0% |
| !!! | GCAGTTAATTTTAAAGAACT+TGG | - | chr4.3:83590941-83590960 | None:intergenic | 25.0% |
| !!! | TATGTTTGGATTAATGGATT+TGG | - | chr4.3:83588804-83588823 | None:intergenic | 25.0% |
| !!! | TTCTAAAGCTAATTCTTTCA+GGG | + | chr4.3:83587919-83587938 | MS.gene060843:intron | 25.0% |
| !!! | TTCTGATCATTTTTCCTATT+GGG | + | chr4.3:83589215-83589234 | MS.gene060843:intron | 25.0% |
| !!! | TTTCTGATCATTTTTCCTAT+TGG | + | chr4.3:83589214-83589233 | MS.gene060843:intron | 25.0% |
| !!! | TTTTTTTTTCCTTTCTTCAC+TGG | + | chr4.3:83587151-83587170 | MS.gene060843:intron | 25.0% |
| AAACAGAATTCAAGAATCTG+AGG | + | chr4.3:83591038-83591057 | MS.gene060843:intron | 30.0% | |
| AAATAGGAACTATTCAGTAG+TGG | - | chr4.3:83585968-83585987 | None:intergenic | 30.0% | |
| AAATAGGAATAGAAATGGGT+GGG | - | chr4.3:83588772-83588791 | None:intergenic | 30.0% | |
| AAATCTCGAAAACAAAGCAT+TGG | - | chr4.3:83585921-83585940 | None:intergenic | 30.0% | |
| AACCAAGACAACATTGAAAA+CGG | - | chr4.3:83586912-83586931 | None:intergenic | 30.0% | |
| AACCTGAAATTTCCTTTAAC+AGG | - | chr4.3:83586860-83586879 | None:intergenic | 30.0% | |
| AACCTTGATTCATGTAAGAT+TGG | + | chr4.3:83588337-83588356 | MS.gene060843:CDS | 30.0% | |
| AACTAATCTCTTGAAATGGT+TGG | + | chr4.3:83589361-83589380 | MS.gene060843:intron | 30.0% | |
| AACTTGGGATTTAATGACAT+AGG | + | chr4.3:83588075-83588094 | MS.gene060843:CDS | 30.0% | |
| AAGCTGAAACACTGTTTAAT+AGG | + | chr4.3:83587192-83587211 | MS.gene060843:intron | 30.0% | |
| AAGGAGAAAGAAGAATATGA+AGG | + | chr4.3:83588609-83588628 | MS.gene060843:intron | 30.0% | |
| AAGTTAGGTGATTCATACTA+AGG | + | chr4.3:83589441-83589460 | MS.gene060843:intron | 30.0% | |
| ACCAATGATTTGAAGGTAAT+AGG | - | chr4.3:83586812-83586831 | None:intergenic | 30.0% | |
| ACTTATTCTGTACAAACTAC+TGG | + | chr4.3:83588182-83588201 | MS.gene060843:intron | 30.0% | |
| AGATAGTTCAGTTGAAGATT+CGG | - | chr4.3:83586562-83586581 | None:intergenic | 30.0% | |
| AGTAATGAAAAGAACTTGTC+AGG | + | chr4.3:83589390-83589409 | MS.gene060843:intron | 30.0% | |
| AGTTATTGTAGGAATGTTGA+TGG | + | chr4.3:83588003-83588022 | MS.gene060843:intron | 30.0% | |
| ATACTGTATGGACAATATTG+GGG | - | chr4.3:83587447-83587466 | None:intergenic | 30.0% | |
| ATATCCAGAAGTTTCTCTTT+CGG | - | chr4.3:83589125-83589144 | None:intergenic | 30.0% | |
| ATATTCCTTGTGGAATGAAT+GGG | + | chr4.3:83589143-83589162 | MS.gene060843:intron | 30.0% | |
| ATTTCCTTTAACAGGTAAAG+AGG | - | chr4.3:83586852-83586871 | None:intergenic | 30.0% | |
| CACTACCAATACATTATGTT+TGG | - | chr4.3:83588818-83588837 | None:intergenic | 30.0% | |
| CATTCCTACAATAACTGTTT+CGG | - | chr4.3:83587999-83588018 | None:intergenic | 30.0% | |
| CTACTGAATAGTTCCTATTT+AGG | + | chr4.3:83585968-83585987 | MS.gene060843:intron | 30.0% | |
| GAAACAAAGCATACAAGAAA+AGG | - | chr4.3:83588415-83588434 | None:intergenic | 30.0% | |
| GGAAGAAATAGGAATAGAAA+TGG | - | chr4.3:83588777-83588796 | None:intergenic | 30.0% | |
| GGAATAAAGCTAAATTCAAC+AGG | - | chr4.3:83589303-83589322 | None:intergenic | 30.0% | |
| GTAACTTAATGATGTCTTTC+TGG | + | chr4.3:83587739-83587758 | MS.gene060843:intron | 30.0% | |
| GTAATGAAAAGAACTTGTCA+GGG | + | chr4.3:83589391-83589410 | MS.gene060843:intron | 30.0% | |
| TACCTGTTAAAGGAAATTTC+AGG | + | chr4.3:83586855-83586874 | MS.gene060843:intron | 30.0% | |
| TATATTCCTTGTGGAATGAA+TGG | + | chr4.3:83589142-83589161 | MS.gene060843:intron | 30.0% | |
| TGAAGTTCATCAAAGAACAT+TGG | - | chr4.3:83585610-83585629 | None:intergenic | 30.0% | |
| TGATCATATGCAAACAATTG+TGG | - | chr4.3:83588915-83588934 | None:intergenic | 30.0% | |
| TGCTAGAGTAGAATAAAGAT+AGG | + | chr4.3:83588234-83588253 | MS.gene060843:intron | 30.0% | |
| TGTCTGAAAAGTAAAGCTTT+GGG | + | chr4.3:83585680-83585699 | MS.gene060843:intron | 30.0% | |
| TTAAGCAGGATTGACAAAAT+TGG | + | chr4.3:83588306-83588325 | MS.gene060843:intron | 30.0% | |
| TTATTCCTGTGATAAAGTGT+GGG | - | chr4.3:83590281-83590300 | None:intergenic | 30.0% | |
| TTGTCATCTTCTTAGACATA+TGG | + | chr4.3:83586152-83586171 | MS.gene060843:intron | 30.0% | |
| TTGTCTGAAAAGTAAAGCTT+TGG | + | chr4.3:83585679-83585698 | MS.gene060843:intron | 30.0% | |
| TTTATTCCTGTGATAAAGTG+TGG | - | chr4.3:83590282-83590301 | None:intergenic | 30.0% | |
| TTTCAATGGAGAAAACGATA+GGG | + | chr4.3:83588431-83588450 | MS.gene060843:intron | 30.0% | |
| ! | AAAGCATTCACAAGACAATA+AGG | - | chr4.3:83587120-83587139 | None:intergenic | 30.0% |
| ! | AACCTTAATGCTTTTACGAA+AGG | + | chr4.3:83587390-83587409 | MS.gene060843:intron | 30.0% |
| ! | ACAAGTTCTTTTCATTACTC+AGG | - | chr4.3:83589389-83589408 | None:intergenic | 30.0% |
| ! | ATAATTTACAGGGTGCTTAT+TGG | + | chr4.3:83587951-83587970 | MS.gene060843:intron | 30.0% |
| ! | ATTTTCTTCACAACGCTTTT+AGG | + | chr4.3:83588986-83589005 | MS.gene060843:intron | 30.0% |
| ! | CTTTGATTTAACCCATATGT+CGG | + | chr4.3:83590976-83590995 | MS.gene060843:intron | 30.0% |
| ! | GATATTTCGAATTTGCTTTC+TGG | - | chr4.3:83586755-83586774 | None:intergenic | 30.0% |
| ! | TAATTTACAGGGTGCTTATT+GGG | + | chr4.3:83587952-83587971 | MS.gene060843:intron | 30.0% |
| ! | TGTGAAAGTACATCTCATAA+TGG | - | chr4.3:83589183-83589202 | None:intergenic | 30.0% |
| !! | ACAAAGCATTGGTAAATTTC+TGG | - | chr4.3:83585910-83585929 | None:intergenic | 30.0% |
| !! | ATCTCTGAAGTCTCTTAATT+TGG | + | chr4.3:83589688-83589707 | MS.gene060843:CDS | 30.0% |
| !! | ATTTACCTTGGTTCTTTTAC+AGG | + | chr4.3:83588030-83588049 | MS.gene060843:intron | 30.0% |
| !! | TCTGATCATTTTTCCTATTG+GGG | + | chr4.3:83589216-83589235 | MS.gene060843:intron | 30.0% |
| !! | TCTTGTATGCTTTGTTTCAA+TGG | + | chr4.3:83588417-83588436 | MS.gene060843:intron | 30.0% |
| !! | TTCCTTTCGTAAAAGCATTA+AGG | - | chr4.3:83587395-83587414 | None:intergenic | 30.0% |
| !! | TTCGTAAAAGCATTAAGGTT+TGG | - | chr4.3:83587390-83587409 | None:intergenic | 30.0% |
| !! | TTTATAATCACAAGTGCTGA+TGG | + | chr4.3:83589330-83589349 | MS.gene060843:intron | 30.0% |
| !!! | AAACGTGGAGAAAAGTTTTT+TGG | + | chr4.3:83588669-83588688 | MS.gene060843:intron | 30.0% |
| !!! | AACGTGGAGAAAAGTTTTTT+GGG | + | chr4.3:83588670-83588689 | MS.gene060843:intron | 30.0% |
| !!! | TGGGATCTACATTTTGTTTT+TGG | + | chr4.3:83587971-83587990 | MS.gene060843:intron | 30.0% |
| !!! | TGTAGTAAAGTCACTGATTT+TGG | + | chr4.3:83586343-83586362 | MS.gene060843:CDS | 30.0% |
| !!! | TTAAATTAGTTTTCTCGGGT+GGG | + | chr4.3:83587352-83587371 | MS.gene060843:intron | 30.0% |
| !!! | TTTAAATTAGTTTTCTCGGG+TGG | + | chr4.3:83587351-83587370 | MS.gene060843:intron | 30.0% |
| !!! | TTTTTCAGGTCTAACTAAGT+TGG | + | chr4.3:83585788-83585807 | MS.gene060843:intron | 30.0% |
| AATGAGGATGTAATACCCAT+TGG | + | chr4.3:83587775-83587794 | MS.gene060843:intron | 35.0% | |
| ACACCCTTCCAAATTTAAGA+GGG | - | chr4.3:83586958-83586977 | None:intergenic | 35.0% | |
| ACCTGATAAAGGCTTCATAT+CGG | - | chr4.3:83585853-83585872 | None:intergenic | 35.0% | |
| ACCTGTGTAATAGGATTTCT+AGG | - | chr4.3:83590073-83590092 | None:intergenic | 35.0% | |
| ACTTCTGGATATATTCCTTG+TGG | + | chr4.3:83589133-83589152 | MS.gene060843:intron | 35.0% | |
| AGATGCAACAAACCTGATAA+AGG | - | chr4.3:83585864-83585883 | None:intergenic | 35.0% | |
| AGCAAATCAATCAGATTGGT+TGG | - | chr4.3:83589973-83589992 | None:intergenic | 35.0% | |
| AGGAGCTCAATTGGTATTAT+TGG | - | chr4.3:83590012-83590031 | None:intergenic | 35.0% | |
| AGGTACGTATTTCTCTTGTT+TGG | - | chr4.3:83588743-83588762 | None:intergenic | 35.0% | |
| AGTGGTTTAAGGAAATTGTG+TGG | + | chr4.3:83589659-83589678 | MS.gene060843:CDS | 35.0% | |
| ATAGTTCAGTTGAAGATTCG+GGG | - | chr4.3:83586560-83586579 | None:intergenic | 35.0% | |
| ATCTAACCTTTCAATGGGAA+CGG | - | chr4.3:83590257-83590276 | None:intergenic | 35.0% | |
| CACAGGAATAAAAGAGATTC+TGG | + | chr4.3:83590290-83590309 | MS.gene060843:intron | 35.0% | |
| CACCAATCTTACATGAATCA+AGG | - | chr4.3:83588342-83588361 | None:intergenic | 35.0% | |
| CACTCCTTGAGTCATTAAAA+TGG | + | chr4.3:83587624-83587643 | MS.gene060843:intron | 35.0% | |
| CAGTAGCAAATCAATCAGAT+TGG | - | chr4.3:83589977-83589996 | None:intergenic | 35.0% | |
| CATTCACACCAATGATTTGA+AGG | - | chr4.3:83586819-83586838 | None:intergenic | 35.0% | |
| CTTGAGTCATTAAAATGGAG+AGG | + | chr4.3:83587629-83587648 | MS.gene060843:intron | 35.0% | |
| GAAATAGGAATAGAAATGGG+TGG | - | chr4.3:83588773-83588792 | None:intergenic | 35.0% | |
| GAATTGTCTGATACTGAAGT+TGG | + | chr4.3:83589031-83589050 | MS.gene060843:CDS | 35.0% | |
| GATACTGAAGTTGGAAACAA+TGG | + | chr4.3:83589040-83589059 | MS.gene060843:CDS | 35.0% | |
| GATAGTTCAGTTGAAGATTC+GGG | - | chr4.3:83586561-83586580 | None:intergenic | 35.0% | |
| GATGAGTGAACTTTGTTGAT+TGG | + | chr4.3:83587705-83587724 | MS.gene060843:intron | 35.0% | |
| GCCTATTACCTTCAAATCAT+TGG | + | chr4.3:83586808-83586827 | MS.gene060843:intron | 35.0% | |
| GCTTACGCAGTTATAAATTG+AGG | - | chr4.3:83586716-83586735 | None:intergenic | 35.0% | |
| GTTTCAATGGAGAAAACGAT+AGG | + | chr4.3:83588430-83588449 | MS.gene060843:intron | 35.0% | |
| TAATTTCCGTTCCCATTGAA+AGG | + | chr4.3:83590248-83590267 | MS.gene060843:intron | 35.0% | |
| TACTGCAAAGTGATTATCTG+TGG | + | chr4.3:83590531-83590550 | MS.gene060843:intron | 35.0% | |
| TACTGTATGGACAATATTGG+GGG | - | chr4.3:83587446-83587465 | None:intergenic | 35.0% | |
| TACTTAAGTTCAACGAGTAG+TGG | - | chr4.3:83587262-83587281 | None:intergenic | 35.0% | |
| TAGCTCATTTGAAAGGTGAT+TGG | + | chr4.3:83588109-83588128 | MS.gene060843:intron | 35.0% | |
| TAGTAATCGTAATCAGCTGT+TGG | + | chr4.3:83587526-83587545 | MS.gene060843:intron | 35.0% | |
| TCAAACCTGATAAATGCTCT+AGG | - | chr4.3:83589066-83589085 | None:intergenic | 35.0% | |
| TCATAAGCAATTGATCTGCT+TGG | + | chr4.3:83589009-83589028 | MS.gene060843:CDS | 35.0% | |
| TCCTAGAAATCCTATTACAC+AGG | + | chr4.3:83590069-83590088 | MS.gene060843:intron | 35.0% | |
| TCTCCAATTCTCTTTAAACG+TGG | + | chr4.3:83588654-83588673 | MS.gene060843:intron | 35.0% | |
| TCTCCACGTTTAAAGAGAAT+TGG | - | chr4.3:83588660-83588679 | None:intergenic | 35.0% | |
| TCTGGATGAAGTATATTCCT+GGG | + | chr4.3:83590308-83590327 | MS.gene060843:intron | 35.0% | |
| TGAAACATCACAATAAGGCA+AGG | - | chr4.3:83586399-83586418 | None:intergenic | 35.0% | |
| TGCTGTGAAACATCACAATA+AGG | - | chr4.3:83586404-83586423 | None:intergenic | 35.0% | |
| TGGAAAATACACCAACATCA+TGG | - | chr4.3:83585948-83585967 | None:intergenic | 35.0% | |
| TGGAATCTCTCAATATGAAG+TGG | + | chr4.3:83585808-83585827 | MS.gene060843:CDS | 35.0% | |
| TGGGAATCTAACCTTTCAAT+GGG | - | chr4.3:83590262-83590281 | None:intergenic | 35.0% | |
| TGGTAAAATCAAGTGAGAGT+GGG | + | chr4.3:83590197-83590216 | MS.gene060843:intron | 35.0% | |
| TGTCAGTCAGAAGAGATTAA+TGG | - | chr4.3:83590846-83590865 | None:intergenic | 35.0% | |
| TTCTGGATGAAGTATATTCC+TGG | + | chr4.3:83590307-83590326 | MS.gene060843:intron | 35.0% | |
| TTCTTTGAGTCGTAGAAGTT+AGG | + | chr4.3:83589426-83589445 | MS.gene060843:intron | 35.0% | |
| TTGCCCTCTTAAATTTGGAA+GGG | + | chr4.3:83586952-83586971 | MS.gene060843:CDS | 35.0% | |
| TTGTTAGTGACAGTGGTTTA+AGG | + | chr4.3:83589648-83589667 | MS.gene060843:CDS | 35.0% | |
| ! | AGATGCAATATTTCTGACAG+AGG | + | chr4.3:83587864-83587883 | MS.gene060843:CDS | 35.0% |
| ! | CACACAAGCATATCTTTTGA+AGG | - | chr4.3:83585654-83585673 | None:intergenic | 35.0% |
| ! | GAGATTTTCTTCCATGATGT+TGG | + | chr4.3:83585934-83585953 | MS.gene060843:intron | 35.0% |
| ! | GATGCAATATTTCTGACAGA+GGG | + | chr4.3:83587865-83587884 | MS.gene060843:CDS | 35.0% |
| ! | GATTTGGGATAGGAAGAAAT+AGG | - | chr4.3:83588788-83588807 | None:intergenic | 35.0% |
| ! | GCAAATCAATCAGATTGGTT+GGG | - | chr4.3:83589972-83589991 | None:intergenic | 35.0% |
| ! | GCATGTTTAGCTCATTTGAA+AGG | + | chr4.3:83588102-83588121 | MS.gene060843:CDS | 35.0% |
| ! | TCTTGTTAACTTGGTCAAGT+TGG | + | chr4.3:83585490-83585509 | MS.gene060843:CDS | 35.0% |
| ! | TGCATCCTTTTGATCACAAT+AGG | + | chr4.3:83585884-83585903 | MS.gene060843:intron | 35.0% |
| ! | TGTGGTTTTCTTATACCGTT+TGG | + | chr4.3:83590572-83590591 | MS.gene060843:intron | 35.0% |
| ! | TTCCGTTTTCAATGTTGTCT+TGG | + | chr4.3:83586907-83586926 | MS.gene060843:intron | 35.0% |
| ! | TTTGGCATCAGTTTTCTAAG+AGG | + | chr4.3:83586361-83586380 | MS.gene060843:CDS | 35.0% |
| !! | AGCGTCAGTTTTAACCTTAT+GGG | + | chr4.3:83588586-83588605 | MS.gene060843:intron | 35.0% |
| !! | CTCTCCATTTTAATGACTCA+AGG | - | chr4.3:83587631-83587650 | None:intergenic | 35.0% |
| !! | GTTGATGGTAACATTTACCT+TGG | + | chr4.3:83588018-83588037 | MS.gene060843:intron | 35.0% |
| !! | TAACTTGGTCAAGTTGGATT+TGG | + | chr4.3:83585496-83585515 | MS.gene060843:CDS | 35.0% |
| !! | TAAGATTGGTGATGAAGGAT+TGG | + | chr4.3:83588351-83588370 | MS.gene060843:CDS | 35.0% |
| !! | TATTGGTAGTGATGACTTCT+TGG | + | chr4.3:83588827-83588846 | MS.gene060843:intron | 35.0% |
| !! | TCAAATTAGCACCGACATAT+GGG | - | chr4.3:83590990-83591009 | None:intergenic | 35.0% |
| !! | TCAGTTTTAACCTTATGGGA+AGG | + | chr4.3:83588590-83588609 | MS.gene060843:intron | 35.0% |
| !! | TCATGTAAGATTGGTGATGA+AGG | + | chr4.3:83588346-83588365 | MS.gene060843:CDS | 35.0% |
| !! | TGGATTAATGGATTTGGGAT+AGG | - | chr4.3:83588798-83588817 | None:intergenic | 35.0% |
| !! | TTCAAATTAGCACCGACATA+TGG | - | chr4.3:83590991-83591010 | None:intergenic | 35.0% |
| !!! | CATTTTGAATTTGCTGATGC+AGG | + | chr4.3:83590408-83590427 | MS.gene060843:intron | 35.0% |
| !!! | CTTCTCTCTCTCTGTTTTTT+GGG | + | chr4.3:83589263-83589282 | MS.gene060843:intron | 35.0% |
| !!! | GTCTCTTTTTTTGCAATGCT+TGG | + | chr4.3:83590706-83590725 | MS.gene060843:intron | 35.0% |
| !!! | TGGAGAAAAGTTTTTTGGGT+GGG | + | chr4.3:83588674-83588693 | MS.gene060843:intron | 35.0% |
| AACTTGGGTGGAATATGAGT+GGG | - | chr4.3:83586015-83586034 | None:intergenic | 40.0% | |
| AAGCAGACATCAATGCCAAA+TGG | - | chr4.3:83589246-83589265 | None:intergenic | 40.0% | |
| AATTAACTGCATGCTACAGC+TGG | + | chr4.3:83590951-83590970 | MS.gene060843:intron | 40.0% | |
| ACAAATTTGACTGGGACAGA+GGG | - | chr4.3:83590808-83590827 | None:intergenic | 40.0% | |
| ACTCTGCTTGTTTGGATGAA+TGG | + | chr4.3:83588531-83588550 | MS.gene060843:intron | 40.0% | |
| ACTGTCACTAACAACAGTGA+AGG | - | chr4.3:83589567-83589586 | None:intergenic | 40.0% | |
| AGAGTGGGAGAAGTTATAGT+TGG | + | chr4.3:83590212-83590231 | MS.gene060843:intron | 40.0% | |
| AGATTCCCACACTTTATCAC+AGG | + | chr4.3:83590273-83590292 | MS.gene060843:intron | 40.0% | |
| AGCATAAATTGTTCAGCCTC+TGG | + | chr4.3:83590350-83590369 | MS.gene060843:intron | 40.0% | |
| AGTAAGAAAAATATCGGGGG+AGG | + | chr4.3:83587278-83587297 | MS.gene060843:intron | 40.0% | |
| ATCACAGAACAGCAACCTTA+CGG | + | chr4.3:83591144-83591163 | MS.gene060843:CDS | 40.0% | |
| ATGAGACGGACAAATTTGAC+TGG | - | chr4.3:83590817-83590836 | None:intergenic | 40.0% | |
| ATGGGAACACATACTTGCAA+GGG | - | chr4.3:83589747-83589766 | None:intergenic | 40.0% | |
| ATGTTGTCTTGGTTCATTCC+AGG | + | chr4.3:83586918-83586937 | MS.gene060843:intron | 40.0% | |
| CAAACAAATCAAGGTCAGTG+AGG | - | chr4.3:83590443-83590462 | None:intergenic | 40.0% | |
| CAAATCATTGGTGTGAATGC+AGG | + | chr4.3:83586820-83586839 | MS.gene060843:intron | 40.0% | |
| CAAGTTAACAAGACCAGAGA+AGG | - | chr4.3:83585483-83585502 | None:intergenic | 40.0% | |
| CACTCAATGCCTTTCAACTT+GGG | - | chr4.3:83586030-83586049 | None:intergenic | 40.0% | |
| CATGCACAGAGACAAGTATA+TGG | - | chr4.3:83586114-83586133 | None:intergenic | 40.0% | |
| CTTGCCCTCTTAAATTTGGA+AGG | + | chr4.3:83586951-83586970 | MS.gene060843:CDS | 40.0% | |
| CTTGTCAAGCTTGTAAGTTC+TGG | - | chr4.3:83586218-83586237 | None:intergenic | 40.0% | |
| GAAGCTTGCCCTCTTAAATT+TGG | + | chr4.3:83586947-83586966 | MS.gene060843:CDS | 40.0% | |
| GACACCCTTCCAAATTTAAG+AGG | - | chr4.3:83586959-83586978 | None:intergenic | 40.0% | |
| GCAAGGGTTGGAGAAATAAA+AGG | - | chr4.3:83587581-83587600 | None:intergenic | 40.0% | |
| GCTTACCAAATTACTGATGC+TGG | + | chr4.3:83589713-83589732 | MS.gene060843:CDS | 40.0% | |
| GGGTTGGAGAAATAAAAGGT+TGG | - | chr4.3:83587577-83587596 | None:intergenic | 40.0% | |
| GTGGGAATCTAACCTTTCAA+TGG | - | chr4.3:83590263-83590282 | None:intergenic | 40.0% | |
| GTGGTAAAATCAAGTGAGAG+TGG | + | chr4.3:83590196-83590215 | MS.gene060843:intron | 40.0% | |
| TAGAAATGGGTGGGAAATAG+AGG | - | chr4.3:83588763-83588782 | None:intergenic | 40.0% | |
| TCACTCAATGCCTTTCAACT+TGG | - | chr4.3:83586031-83586050 | None:intergenic | 40.0% | |
| TCCGATATGAAGCCTTTATC+AGG | + | chr4.3:83585849-83585868 | MS.gene060843:CDS | 40.0% | |
| TCGTAATCAGCTGTTGGAAA+TGG | + | chr4.3:83587532-83587551 | MS.gene060843:intron | 40.0% | |
| TCTGGCCTATTGTGATCAAA+AGG | - | chr4.3:83585892-83585911 | None:intergenic | 40.0% | |
| TCTTCTTTCTCCTTCCCATA+AGG | - | chr4.3:83588603-83588622 | None:intergenic | 40.0% | |
| TCTTGTAACATCTGCATGCT+TGG | + | chr4.3:83586977-83586996 | MS.gene060843:CDS | 40.0% | |
| TCTTGTAGGATTGTCTAGTC+TGG | + | chr4.3:83589526-83589545 | MS.gene060843:intron | 40.0% | |
| TGAGACGGACAAATTTGACT+GGG | - | chr4.3:83590816-83590835 | None:intergenic | 40.0% | |
| TGCACCTCTTTACCTGTTAA+AGG | + | chr4.3:83586845-83586864 | MS.gene060843:intron | 40.0% | |
| TGCTCAAATCAGAATCTGCT+TGG | - | chr4.3:83587237-83587256 | None:intergenic | 40.0% | |
| TGTCATTGCAAGTGAAAGTG+TGG | + | chr4.3:83588958-83588977 | MS.gene060843:intron | 40.0% | |
| TTCACTGTTGTTAGTGACAG+TGG | + | chr4.3:83589566-83589585 | MS.gene060843:intron | 40.0% | |
| ! | AATGGCCTAGAGCATTTATC+AGG | + | chr4.3:83589058-83589077 | MS.gene060843:CDS | 40.0% |
| ! | AGATTCAAGTTTGACAGTGC+AGG | - | chr4.3:83587840-83587859 | None:intergenic | 40.0% |
| ! | ATTCAAGAATCTGAGGTCCT+TGG | + | chr4.3:83591045-83591064 | MS.gene060843:CDS | 40.0% |
| ! | CATATTCCACCCAAGTTGAA+AGG | + | chr4.3:83586018-83586037 | MS.gene060843:intron | 40.0% |
| ! | GATTCAAGTTTGACAGTGCA+GGG | - | chr4.3:83587839-83587858 | None:intergenic | 40.0% |
| ! | TGATGAAGGATTGGTGAACT+TGG | + | chr4.3:83588360-83588379 | MS.gene060843:CDS | 40.0% |
| ! | TTGGTTTGAGCTAAGGCTTA+AGG | - | chr4.3:83589941-83589960 | None:intergenic | 40.0% |
| !! | AGCTCAATTGGTTTGAGCTA+AGG | - | chr4.3:83589948-83589967 | None:intergenic | 40.0% |
| !! | CTCACTGACCTTGATTTGTT+TGG | + | chr4.3:83590441-83590460 | MS.gene060843:CDS | 40.0% |
| !! | CTTCTCTGGTCTTGTTAACT+TGG | + | chr4.3:83585481-83585500 | MS.gene060843:CDS | 40.0% |
| !! | GAGCGTCAGTTTTAACCTTA+TGG | + | chr4.3:83588585-83588604 | MS.gene060843:intron | 40.0% |
| !! | GCACTGTTCATTTTCAAGGT+TGG | + | chr4.3:83585543-83585562 | MS.gene060843:intron | 40.0% |
| !!! | GCTTCTCTCTCTCTGTTTTT+TGG | + | chr4.3:83589262-83589281 | MS.gene060843:intron | 40.0% |
| !!! | GTGGAGAAAAGTTTTTTGGG+TGG | + | chr4.3:83588673-83588692 | MS.gene060843:intron | 40.0% |
| AAGAACTTGTCAGGGAGAGA+TGG | + | chr4.3:83589399-83589418 | MS.gene060843:intron | 45.0% | |
| AGCACTCAACCAGTGAAGAA+AGG | - | chr4.3:83587163-83587182 | None:intergenic | 45.0% | |
| AGCTGGCACATTATCGTACT+TGG | + | chr4.3:83588883-83588902 | MS.gene060843:intron | 45.0% | |
| AGCTGTTGGAAATGGTAGTC+GGG | + | chr4.3:83587540-83587559 | MS.gene060843:intron | 45.0% | |
| AGGAGTGACAAGACAGTTTG+AGG | - | chr4.3:83587611-83587630 | None:intergenic | 45.0% | |
| AGGTCCTTGGAAATATGCAG+CGG | + | chr4.3:83591058-83591077 | MS.gene060843:CDS | 45.0% | |
| AGGTCGAGATTGCATGTGTT+GGG | + | chr4.3:83588474-83588493 | MS.gene060843:intron | 45.0% | |
| CAACCTTACGGACAAAACTG+TGG | + | chr4.3:83591156-83591175 | MS.gene060843:CDS | 45.0% | |
| CAACTTGGGTGGAATATGAG+TGG | - | chr4.3:83586016-83586035 | None:intergenic | 45.0% | |
| CAGCTGTTGGAAATGGTAGT+CGG | + | chr4.3:83587539-83587558 | MS.gene060843:intron | 45.0% | |
| CATGGGAACACATACTTGCA+AGG | - | chr4.3:83589748-83589767 | None:intergenic | 45.0% | |
| CCAAACCCATTCATTCCACA+AGG | - | chr4.3:83589151-83589170 | None:intergenic | 45.0% | |
| CCAAATTACTGATGCTGGAC+TGG | + | chr4.3:83589718-83589737 | MS.gene060843:CDS | 45.0% | |
| CCAATTGAGCTCCTGTTTCA+AGG | + | chr4.3:83590018-83590037 | MS.gene060843:intron | 45.0% | |
| CCAGTCCAGCATCAGTAATT+TGG | - | chr4.3:83589721-83589740 | None:intergenic | 45.0% | |
| CCAGTCCTGTAAAAGAACCA+AGG | - | chr4.3:83588038-83588057 | None:intergenic | 45.0% | |
| CCTTGAAACAGGAGCTCAAT+TGG | - | chr4.3:83590021-83590040 | None:intergenic | 45.0% | |
| CTTGTCAAGCTTGCAAGTTC+TGG | - | chr4.3:83586310-83586329 | None:intergenic | 45.0% | |
| GACAAATTTGACTGGGACAG+AGG | - | chr4.3:83590809-83590828 | None:intergenic | 45.0% | |
| GCATGCTTGGATTCACTTTC+AGG | + | chr4.3:83586990-83587009 | MS.gene060843:CDS | 45.0% | |
| GGAGTGACAAGACAGTTTGA+GGG | - | chr4.3:83587610-83587629 | None:intergenic | 45.0% | |
| GGCTCCGAAACAGTTATTGT+AGG | + | chr4.3:83587992-83588011 | MS.gene060843:intron | 45.0% | |
| TAGGTCGAGATTGCATGTGT+TGG | + | chr4.3:83588473-83588492 | MS.gene060843:intron | 45.0% | |
| TCAATGCCTTTCAACTTGGG+TGG | - | chr4.3:83586027-83586046 | None:intergenic | 45.0% | |
| TCCTAGCGCCAAACAAATCA+AGG | - | chr4.3:83590452-83590471 | None:intergenic | 45.0% | |
| TGAGCTAAGGCTTAAGGAGT+TGG | - | chr4.3:83589935-83589954 | None:intergenic | 45.0% | |
| TGCTCCGAAAGAGAAACTTC+TGG | + | chr4.3:83589118-83589137 | MS.gene060843:intron | 45.0% | |
| TGGATTTGGAGAGATGTCCT+GGG | + | chr4.3:83585510-83585529 | MS.gene060843:CDS | 45.0% | |
| TGTTGGGATGGATAGGCATA+AGG | + | chr4.3:83588490-83588509 | MS.gene060843:intron | 45.0% | |
| TTCTCTCGACTCTGCTTGTT+TGG | + | chr4.3:83588523-83588542 | MS.gene060843:intron | 45.0% | |
| TTGCATGTGTTGGGATGGAT+AGG | + | chr4.3:83588483-83588502 | MS.gene060843:intron | 45.0% | |
| TTGGATTTGGAGAGATGTCC+TGG | + | chr4.3:83585509-83585528 | MS.gene060843:CDS | 45.0% | |
| TTTGCTGATGCAGGTTTGAC+TGG | + | chr4.3:83590417-83590436 | MS.gene060843:intron | 45.0% | |
| ! | CCTTGTGGAATGAATGGGTT+TGG | + | chr4.3:83589148-83589167 | MS.gene060843:intron | 45.0% |
| ! | GATTGGTTGGGTAGCTCAAT+TGG | - | chr4.3:83589960-83589979 | None:intergenic | 45.0% |
| ! | TTTCTGACAGAGGGTGTGAT+AGG | + | chr4.3:83587874-83587893 | MS.gene060843:CDS | 45.0% |
| !! | ACCTTGATTTGTTTGGCGCT+AGG | + | chr4.3:83590448-83590467 | MS.gene060843:CDS | 45.0% |
| !! | ACTCCACAGTTTTGTCCGTA+AGG | - | chr4.3:83591162-83591181 | None:intergenic | 45.0% |
| !! | CCTTGGTTCTTTTACAGGAC+TGG | + | chr4.3:83588035-83588054 | MS.gene060843:intron | 45.0% |
| !!! | GGAGGCACTGTTCATTTTCA+AGG | + | chr4.3:83585539-83585558 | MS.gene060843:CDS | 45.0% |
| !!! | TGTTCAGCCTCTGGTTTTCT+AGG | + | chr4.3:83590359-83590378 | MS.gene060843:intron | 45.0% |
| !! | GAATATAAAAAAAAAAAAAA+AGG | - | chr4.3:83589502-83589521 | None:intergenic | 5.0% |
| AGATGTCCTGGGATTCATGG+AGG | + | chr4.3:83585521-83585540 | MS.gene060843:CDS | 50.0% | |
| AGGGCAAGCTTCTGTAATCC+TGG | - | chr4.3:83586939-83586958 | None:intergenic | 50.0% | |
| CGAGATTGCATGTGTTGGGA+TGG | + | chr4.3:83588478-83588497 | MS.gene060843:intron | 50.0% | |
| CTTAAGGAGTTGGAGGTCCT+GGG | - | chr4.3:83589925-83589944 | None:intergenic | 50.0% | |
| GAGAGATGTCCTGGGATTCA+TGG | + | chr4.3:83585518-83585537 | MS.gene060843:CDS | 50.0% | |
| GCAGAAGCCTAGAAAACCAG+AGG | - | chr4.3:83590369-83590388 | None:intergenic | 50.0% | |
| GCGCTAGGATCACAGATGTT+GGG | + | chr4.3:83590463-83590482 | MS.gene060843:CDS | 50.0% | |
| GCTAAGGCTTAAGGAGTTGG+AGG | - | chr4.3:83589932-83589951 | None:intergenic | 50.0% | |
| GCTGTTGGAAATGGTAGTCG+GGG | + | chr4.3:83587541-83587560 | MS.gene060843:intron | 50.0% | |
| GTGACAAGACAGTTTGAGGG+AGG | - | chr4.3:83587607-83587626 | None:intergenic | 50.0% | |
| TCCACCGCTGCATATTTCCA+AGG | - | chr4.3:83591065-83591084 | None:intergenic | 50.0% | |
| TCCTATTGGGGCTCACCATT+TGG | + | chr4.3:83589228-83589247 | MS.gene060843:intron | 50.0% | |
| TCCTTGGAAATATGCAGCGG+TGG | + | chr4.3:83591061-83591080 | MS.gene060843:CDS | 50.0% | |
| ! | AGTTTGAGGGAGGAGTGCAA+GGG | - | chr4.3:83587597-83587616 | None:intergenic | 50.0% |
| ! | GAAGGATTGGTGAACTTGGC+AGG | + | chr4.3:83588364-83588383 | MS.gene060843:CDS | 50.0% |
| ACAGTGCCTCCATGAATCCC+AGG | - | chr4.3:83585530-83585549 | None:intergenic | 55.0% | |
| CCTGGGTTCAAACCCGGAAA+AGG | - | chr4.3:83589908-83589927 | None:intergenic | 55.0% | |
| GCCAAATGGTGAGCCCCAAT+AGG | - | chr4.3:83589232-83589251 | None:intergenic | 55.0% | |
| GCTTAAGGAGTTGGAGGTCC+TGG | - | chr4.3:83589926-83589945 | None:intergenic | 55.0% | |
| GGCGCTAGGATCACAGATGT+TGG | + | chr4.3:83590462-83590481 | MS.gene060843:CDS | 55.0% | |
| TTCTCGGGTGGGAGAGTAGT+GGG | + | chr4.3:83587363-83587382 | MS.gene060843:intron | 55.0% | |
| TTTCTCGGGTGGGAGAGTAG+TGG | + | chr4.3:83587362-83587381 | MS.gene060843:intron | 55.0% | |
| TTTGACAGTGCAGGGAGCTC+TGG | - | chr4.3:83587831-83587850 | None:intergenic | 55.0% | |
| ! | CAGTTTGAGGGAGGAGTGCA+AGG | - | chr4.3:83587598-83587617 | None:intergenic | 55.0% |
| ! | CCTTTTCCGGGTTTGAACCC+AGG | + | chr4.3:83589905-83589924 | MS.gene060843:intron | 55.0% |
| !! | AGCGGTGGATTGACTGATGC+TGG | + | chr4.3:83591076-83591095 | MS.gene060843:CDS | 55.0% |
| !! | TATTGGGGGCGCCCCAATAT+TGG | - | chr4.3:83587432-83587451 | None:intergenic | 55.0% |
| GGAGGTCCTGGGTTCAAACC+CGG | - | chr4.3:83589914-83589933 | None:intergenic | 60.0% | |
| ! | TGAGGGAGGAGTGCAAGGGT+TGG | - | chr4.3:83587593-83587612 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 83585473 | 83591190 | 83585473 | ID=MS.gene060843 |
| chr4.3 | mRNA | 83585473 | 83591190 | 83585473 | ID=MS.gene060843.t1;Parent=MS.gene060843 |
| chr4.3 | exon | 83585473 | 83585560 | 83585473 | ID=MS.gene060843.t1.exon1;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83585473 | 83585560 | 83585473 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| chr4.3 | exon | 83585796 | 83585870 | 83585796 | ID=MS.gene060843.t1.exon2;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83585796 | 83585870 | 83585796 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| chr4.3 | exon | 83586311 | 83586382 | 83586311 | ID=MS.gene060843.t1.exon3;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83586311 | 83586382 | 83586311 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| chr4.3 | exon | 83586940 | 83587011 | 83586940 | ID=MS.gene060843.t1.exon4;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83586940 | 83587011 | 83586940 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| chr4.3 | exon | 83587832 | 83587903 | 83587832 | ID=MS.gene060843.t1.exon5;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83587832 | 83587903 | 83587832 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| chr4.3 | exon | 83588052 | 83588123 | 83588052 | ID=MS.gene060843.t1.exon6;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83588052 | 83588123 | 83588052 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| chr4.3 | exon | 83588314 | 83588385 | 83588314 | ID=MS.gene060843.t1.exon7;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83588314 | 83588385 | 83588314 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| chr4.3 | exon | 83589008 | 83589079 | 83589008 | ID=MS.gene060843.t1.exon8;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83589008 | 83589079 | 83589008 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| chr4.3 | exon | 83589609 | 83589752 | 83589609 | ID=MS.gene060843.t1.exon9;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83589609 | 83589752 | 83589609 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| chr4.3 | exon | 83590430 | 83590501 | 83590430 | ID=MS.gene060843.t1.exon10;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83590430 | 83590501 | 83590430 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| chr4.3 | exon | 83591044 | 83591190 | 83591044 | ID=MS.gene060843.t1.exon11;Parent=MS.gene060843.t1 |
| chr4.3 | CDS | 83591044 | 83591190 | 83591044 | ID=cds.MS.gene060843.t1;Parent=MS.gene060843.t1 |
| Gene Sequence |
| Protein sequence |
