Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061205.t1 | XP_003610421.1 | 84.7 | 72 | 5 | 1 | 1 | 72 | 1 | 66 | 2.10E-23 | 118.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061205.t1 | G7JJ61 | 84.7 | 72 | 5 | 1 | 1 | 72 | 1 | 66 | 1.5e-23 | 118.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053726 | MS.gene061205 | 0.808978 | 2.37E-50 | -1.69E-46 |
| MS.gene061205 | MS.gene33180 | 0.80049 | 1.41E-48 | -1.69E-46 |
| MS.gene061205 | MS.gene34453 | 0.813171 | 2.93E-51 | -1.69E-46 |
| MS.gene061205 | MS.gene37917 | 0.820395 | 7.02E-53 | -1.69E-46 |
| MS.gene061205 | MS.gene44701 | 0.816727 | 4.77E-52 | -1.69E-46 |
| MS.gene061205 | MS.gene47695 | 0.805069 | 1.59E-49 | -1.69E-46 |
| MS.gene061205 | MS.gene49047 | 0.801173 | 1.02E-48 | -1.69E-46 |
| MS.gene061205 | MS.gene51664 | 0.801033 | 1.09E-48 | -1.69E-46 |
| MS.gene061205 | MS.gene52956 | 0.802653 | 5.06E-49 | -1.69E-46 |
| MS.gene061205 | MS.gene53825 | 0.810394 | 1.18E-50 | -1.69E-46 |
| MS.gene061205 | MS.gene73245 | 0.802554 | 5.31E-49 | -1.69E-46 |
| MS.gene061205 | MS.gene75564 | 0.803839 | 2.88E-49 | -1.69E-46 |
| MS.gene061205 | MS.gene77208 | 0.802212 | 6.24E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061205.t1 | MTR_4g132000 | 84.722 | 72 | 5 | 1 | 1 | 72 | 1 | 66 | 1.30e-36 | 120 |
| MS.gene061205.t1 | MTR_4g132010 | 66.667 | 72 | 21 | 1 | 1 | 72 | 1 | 69 | 1.58e-24 | 90.1 |
| MS.gene061205.t1 | MTR_2g023010 | 46.237 | 93 | 33 | 5 | 1 | 90 | 1 | 79 | 9.58e-13 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 25 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGCGACATCATCCTCTTT+TGG | 0.255313 | 8.2:-2492890 | None:intergenic |
| TTAGAAAGGCTTAGAGCTTC+TGG | 0.263068 | 8.2:+2491373 | MS.gene061205:CDS |
| AGCCAACTGAAGTGTGTAAA+AGG | 0.329405 | 8.2:+2492858 | MS.gene061205:intron |
| ATTGATGAGTTACCGAGCTT+TGG | 0.377860 | 8.2:+2492911 | MS.gene061205:CDS |
| GAACGGCATGCCTTTGGCTT+CGG | 0.395190 | 8.2:-2491289 | None:intergenic |
| TGGAGTTTGGTGGAGAAGAC+TGG | 0.395930 | 8.2:+2491233 | MS.gene061205:CDS |
| GCAGCATCTTCAATGGAGTT+TGG | 0.400947 | 8.2:+2491220 | MS.gene061205:CDS |
| GATGATGAACGGCATGCCTT+TGG | 0.417430 | 8.2:-2491295 | None:intergenic |
| GATGAGTTACCGAGCTTTGG+AGG | 0.463820 | 8.2:+2492914 | MS.gene061205:CDS |
| AATAGATCATTCTCTTTCTG+AGG | 0.510132 | 8.2:-2491352 | None:intergenic |
| TTGCAAGGCAGCATCTTCAA+TGG | 0.513024 | 8.2:+2491213 | MS.gene061205:CDS |
| GGAGTTTGGTGGAGAAGACT+GGG | 0.518380 | 8.2:+2491234 | MS.gene061205:CDS |
| AAGAGAATGATCTATTAGAA+AGG | 0.530405 | 8.2:+2491359 | MS.gene061205:CDS |
| ATGCCGTTCATCATCAAGTA+AGG | 0.531383 | 8.2:+2491303 | MS.gene061205:CDS |
| TATCACTTGCCTCCAAAGCT+CGG | 0.545319 | 8.2:-2492923 | None:intergenic |
| AAAGCTCGGTAACTCATCAA+TGG | 0.546639 | 8.2:-2492909 | None:intergenic |
| GCATCTTCAATGGAGTTTGG+TGG | 0.547410 | 8.2:+2491223 | MS.gene061205:CDS |
| AAGGTCTTTGAACCCAAAAG+AGG | 0.575654 | 8.2:+2492877 | MS.gene061205:CDS |
| AACAAAGAAGCCGAAGCCAA+AGG | 0.577054 | 8.2:+2491279 | MS.gene061205:CDS |
| ACACCTTACTTGATGATGAA+CGG | 0.600253 | 8.2:-2491306 | None:intergenic |
| TTCTGGAGATGCAAGTGGGA+AGG | 0.602037 | 8.2:+2491390 | MS.gene061205:CDS |
| AGAGCTTCTGGAGATGCAAG+TGG | 0.611256 | 8.2:+2491385 | MS.gene061205:CDS |
| AACTATGGGAAACTGTTGCA+AGG | 0.631074 | 8.2:+2491198 | None:intergenic |
| GAGCTTCTGGAGATGCAAGT+GGG | 0.649801 | 8.2:+2491386 | MS.gene061205:CDS |
| GAGTTTGGTGGAGAAGACTG+GGG | 0.753495 | 8.2:+2491235 | MS.gene061205:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATGTAG+AGG | + | chr8.2:2491754-2491773 | MS.gene061205:intron | 10.0% |
| !! | TATATATATATATATGTAGA+GGG | + | chr8.2:2491755-2491774 | MS.gene061205:intron | 10.0% |
| !! | GAAAAATGGAAATTAATTAA+GGG | - | chr8.2:2492080-2492099 | None:intergenic | 15.0% |
| !! | TGAAAAATGGAAATTAATTA+AGG | - | chr8.2:2492081-2492100 | None:intergenic | 15.0% |
| !!! | AAAAAAGATCTAATTTTTTG+TGG | - | chr8.2:2492506-2492525 | None:intergenic | 15.0% |
| !!! | TTTTTTGAAATTATTCATCT+GGG | - | chr8.2:2492825-2492844 | None:intergenic | 15.0% |
| !! | GAAAAAATTAATAAGGTCTA+TGG | - | chr8.2:2492230-2492249 | None:intergenic | 20.0% |
| !! | GTTGTTAAAATGATTGATAA+TGG | - | chr8.2:2492800-2492819 | None:intergenic | 20.0% |
| !! | TTAAAACCCAAACAAATAAT+TGG | + | chr8.2:2492457-2492476 | MS.gene061205:intron | 20.0% |
| !! | TTAAGTTTAGTTATGTTGAT+TGG | - | chr8.2:2492635-2492654 | None:intergenic | 20.0% |
| !! | TTTCTTAGACAAATATCAAA+GGG | - | chr8.2:2492261-2492280 | None:intergenic | 20.0% |
| !!! | CTTTTTTGAAATTATTCATC+TGG | - | chr8.2:2492826-2492845 | None:intergenic | 20.0% |
| !!! | TAAGTTTAGTTATGTTGATT+GGG | - | chr8.2:2492634-2492653 | None:intergenic | 20.0% |
| !!! | TTACCACTAACTTTTTTATT+TGG | - | chr8.2:2491853-2491872 | None:intergenic | 20.0% |
| !!! | TTTTAATATGCACAAATTGA+AGG | - | chr8.2:2492742-2492761 | None:intergenic | 20.0% |
| ! | AAAATTAATAAGGTCTATGG+TGG | - | chr8.2:2492227-2492246 | None:intergenic | 25.0% |
| ! | AAGAAAAGGAAAACAAAGTT+AGG | - | chr8.2:2492336-2492355 | None:intergenic | 25.0% |
| ! | AAGAGAATGATCTATTAGAA+AGG | + | chr8.2:2491359-2491378 | MS.gene061205:CDS | 25.0% |
| ! | CTAAGTAATTAACAACATTC+AGG | - | chr8.2:2491625-2491644 | None:intergenic | 25.0% |
| ! | CTTAACAGTTTGGATTTATT+TGG | - | chr8.2:2492162-2492181 | None:intergenic | 25.0% |
| ! | CTTTCTTAGACAAATATCAA+AGG | - | chr8.2:2492262-2492281 | None:intergenic | 25.0% |
| ! | GCAAAAGGAGAAAAATTTAA+GGG | - | chr8.2:2492140-2492159 | None:intergenic | 25.0% |
| ! | TATATATATATGTAGAGGGT+TGG | + | chr8.2:2491759-2491778 | MS.gene061205:intron | 25.0% |
| ! | TTGATATTTGTCTAAGAAAG+AGG | + | chr8.2:2492262-2492281 | MS.gene061205:intron | 25.0% |
| !! | AAGTAATAAAACGTACCTTT+TGG | + | chr8.2:2492113-2492132 | MS.gene061205:intron | 25.0% |
| AAAACTACGTACTGAATCAA+TGG | - | chr8.2:2491885-2491904 | None:intergenic | 30.0% | |
| AAAAGGAAAACAAAGTTAGG+TGG | - | chr8.2:2492333-2492352 | None:intergenic | 30.0% | |
| AAAGATTTCAAAGTCCGAAT+TGG | + | chr8.2:2491420-2491439 | MS.gene061205:intron | 30.0% | |
| AAATTGAAGGAAGAAATTGC+AGG | - | chr8.2:2492729-2492748 | None:intergenic | 30.0% | |
| AATAGATCATTCTCTTTCTG+AGG | - | chr8.2:2491355-2491374 | None:intergenic | 30.0% | |
| GAAAAAAGAGACCAAAACAA+AGG | + | chr8.2:2491938-2491957 | MS.gene061205:intron | 30.0% | |
| GAAAAATTTAAGGGACCAAA+AGG | - | chr8.2:2492131-2492150 | None:intergenic | 30.0% | |
| GAAATTAATTAAGGGACCAA+TGG | - | chr8.2:2492072-2492091 | None:intergenic | 30.0% | |
| GAATATGATTGATGAAGATG+AGG | - | chr8.2:2492371-2492390 | None:intergenic | 30.0% | |
| GCTCCAAATAAAAAAGTTAG+TGG | + | chr8.2:2491847-2491866 | MS.gene061205:intron | 30.0% | |
| GGCAAAAGGAGAAAAATTTA+AGG | - | chr8.2:2492141-2492160 | None:intergenic | 30.0% | |
| GTTGTTAATTACTTAGTCTG+AGG | + | chr8.2:2491629-2491648 | MS.gene061205:intron | 30.0% | |
| GTTTGGATTTATTTGGCAAA+AGG | - | chr8.2:2492155-2492174 | None:intergenic | 30.0% | |
| TTGGGTCCAATTATTTGTTT+GGG | - | chr8.2:2492466-2492485 | None:intergenic | 30.0% | |
| TTTGGGTCCAATTATTTGTT+TGG | - | chr8.2:2492467-2492486 | None:intergenic | 30.0% | |
| ! | AACTTTTCATCATCTGATTC+TGG | - | chr8.2:2492766-2492785 | None:intergenic | 30.0% |
| !! | AAGGTACGTTTTATTACTTG+TGG | - | chr8.2:2492112-2492131 | None:intergenic | 30.0% |
| !! | AGGTACGTTTTATTACTTGT+GGG | - | chr8.2:2492111-2492130 | None:intergenic | 30.0% |
| !! | TTCGGACTTTGAAATCTTTA+AGG | - | chr8.2:2491419-2491438 | None:intergenic | 30.0% |
| !! | TTTTAGTTATGAACCAAACC+AGG | + | chr8.2:2491901-2491920 | MS.gene061205:intron | 30.0% |
| !!! | CTTGAGTAGACAATGTTTTT+TGG | + | chr8.2:2492036-2492055 | MS.gene061205:intron | 30.0% |
| !!! | TTTTGGCTTAAATGATCCAT+TGG | + | chr8.2:2492053-2492072 | MS.gene061205:intron | 30.0% |
| AAAACAAAGTTAGGTGGTAG+TGG | - | chr8.2:2492327-2492346 | None:intergenic | 35.0% | |
| AAAGCAGATGAAGAAGAAGA+TGG | + | chr8.2:2491492-2491511 | MS.gene061205:intron | 35.0% | |
| AAGAAGATGGCGAATGAATT+AGG | + | chr8.2:2491505-2491524 | MS.gene061205:intron | 35.0% | |
| AGAAAAGGAAGGTGAAAAGA+AGG | - | chr8.2:2492530-2492549 | None:intergenic | 35.0% | |
| ATCATCAATCTAACCTGGTT+TGG | - | chr8.2:2491917-2491936 | None:intergenic | 35.0% | |
| CTGCAGAACAAGTTCTTTAT+CGG | + | chr8.2:2491530-2491549 | MS.gene061205:intron | 35.0% | |
| GTTTGCAATTTCATTGTCTC+TGG | - | chr8.2:2491566-2491585 | None:intergenic | 35.0% | |
| TAGAACATACTACACAGTTC+AGG | + | chr8.2:2491673-2491692 | MS.gene061205:intron | 35.0% | |
| TCAGGAATAGTCTCTAACAT+TGG | - | chr8.2:2491607-2491626 | None:intergenic | 35.0% | |
| TCCCAATAATTGAGCCAATT+CGG | - | chr8.2:2491437-2491456 | None:intergenic | 35.0% | |
| TGATTGGGTTATCAAGTGTT+TGG | - | chr8.2:2492619-2492638 | None:intergenic | 35.0% | |
| TGGGGTTAAACTTAACAGTT+TGG | - | chr8.2:2492172-2492191 | None:intergenic | 35.0% | |
| TGTGGGACGAAAATGAAAAA+TGG | - | chr8.2:2492094-2492113 | None:intergenic | 35.0% | |
| TTAACCCCAAATGTCTATTG+TGG | + | chr8.2:2492183-2492202 | MS.gene061205:intron | 35.0% | |
| TTGGTCCACAATAGACATTT+GGG | - | chr8.2:2492191-2492210 | None:intergenic | 35.0% | |
| TTTCGATCATCAATCTAACC+TGG | - | chr8.2:2491922-2491941 | None:intergenic | 35.0% | |
| ! | TATATATGTAGAGGGTTGGT+TGG | + | chr8.2:2491763-2491782 | MS.gene061205:intron | 35.0% |
| ! | TCCGAATTGGCTCAATTATT+GGG | + | chr8.2:2491433-2491452 | MS.gene061205:intron | 35.0% |
| !! | ACACCTTACTTGATGATGAA+CGG | - | chr8.2:2491309-2491328 | None:intergenic | 35.0% |
| !! | TGGTGGACTATCTATAATGT+TGG | - | chr8.2:2492210-2492229 | None:intergenic | 35.0% |
| !! | TTCTTCTTCATCTGCTTTTG+CGG | - | chr8.2:2491490-2491509 | None:intergenic | 35.0% |
| !!! | GTTGTTGCTGTTTCGATTTT+GGG | - | chr8.2:2492484-2492503 | None:intergenic | 35.0% |
| AAAGCTCGGTAACTCATCAA+TGG | - | chr8.2:2492912-2492931 | None:intergenic | 40.0% | |
| AAGGTCTTTGAACCCAAAAG+AGG | + | chr8.2:2492877-2492896 | MS.gene061205:CDS | 40.0% | |
| AGCCAACTGAAGTGTGTAAA+AGG | + | chr8.2:2492858-2492877 | MS.gene061205:intron | 40.0% | |
| ATGCCGTTCATCATCAAGTA+AGG | + | chr8.2:2491303-2491322 | MS.gene061205:CDS | 40.0% | |
| ATTGATGAGTTACCGAGCTT+TGG | + | chr8.2:2492911-2492930 | MS.gene061205:CDS | 40.0% | |
| GAAGGAAGAAATTGCAGGAT+TGG | - | chr8.2:2492724-2492743 | None:intergenic | 40.0% | |
| GAAGGTGAACACAAGAGAAA+AGG | - | chr8.2:2492545-2492564 | None:intergenic | 40.0% | |
| GATTGATGAAGATGAGGAAG+AGG | - | chr8.2:2492365-2492384 | None:intergenic | 40.0% | |
| GGAAGAGGAAGATGAAGAAA+AGG | - | chr8.2:2492350-2492369 | None:intergenic | 40.0% | |
| GTGAACACAAGAGAAAAGGA+AGG | - | chr8.2:2492541-2492560 | None:intergenic | 40.0% | |
| GTTGGTCCACAATAGACATT+TGG | - | chr8.2:2492192-2492211 | None:intergenic | 40.0% | |
| TGGGTTATCAAGTGTTTGGA+GGG | - | chr8.2:2492615-2492634 | None:intergenic | 40.0% | |
| TGGTCCACAATAGACATTTG+GGG | - | chr8.2:2492190-2492209 | None:intergenic | 40.0% | |
| TGTCTAAGAAAGAGGACTGT+TGG | + | chr8.2:2492270-2492289 | MS.gene061205:intron | 40.0% | |
| TTAGAAAGGCTTAGAGCTTC+TGG | + | chr8.2:2491373-2491392 | MS.gene061205:CDS | 40.0% | |
| TTGCAAACAAGCATGATCAC+TGG | + | chr8.2:2491578-2491597 | MS.gene061205:intron | 40.0% | |
| TTGGGTTATCAAGTGTTTGG+AGG | - | chr8.2:2492616-2492635 | None:intergenic | 40.0% | |
| ! | GACCTTTTACACACTTCAGT+TGG | - | chr8.2:2492863-2492882 | None:intergenic | 40.0% |
| ! | GTCCGAATTGGCTCAATTAT+TGG | + | chr8.2:2491432-2491451 | MS.gene061205:intron | 40.0% |
| !! | TACACGACACACCTTTGTTT+TGG | - | chr8.2:2491952-2491971 | None:intergenic | 40.0% |
| !!! | GGTTGTTGCTGTTTCGATTT+TGG | - | chr8.2:2492485-2492504 | None:intergenic | 40.0% |
| AACAAAGAAGCCGAAGCCAA+AGG | + | chr8.2:2491279-2491298 | MS.gene061205:CDS | 45.0% | |
| AAGAGAGAAGGAACGGAAGA+AGG | - | chr8.2:2492567-2492586 | None:intergenic | 45.0% | |
| AGGGAATGAATGAGGTTGTG+AGG | - | chr8.2:2492596-2492615 | None:intergenic | 45.0% | |
| GCAGCATCTTCAATGGAGTT+TGG | + | chr8.2:2491220-2491239 | MS.gene061205:CDS | 45.0% | |
| GCATCTTCAATGGAGTTTGG+TGG | + | chr8.2:2491223-2491242 | MS.gene061205:CDS | 45.0% | |
| GGAACAGAAGAGAGAAGGAA+CGG | - | chr8.2:2492574-2492593 | None:intergenic | 45.0% | |
| GGGAATGAATGAGGTTGTGA+GGG | - | chr8.2:2492595-2492614 | None:intergenic | 45.0% | |
| GTGTTTGGAGGGAATGAATG+AGG | - | chr8.2:2492604-2492623 | None:intergenic | 45.0% | |
| TTGCAAGGCAGCATCTTCAA+TGG | + | chr8.2:2491213-2491232 | MS.gene061205:CDS | 45.0% | |
| ! | ATGGCGACATCATCCTCTTT+TGG | - | chr8.2:2492893-2492912 | None:intergenic | 45.0% |
| ! | TGGCGACATCATCCTCTTTT+GGG | - | chr8.2:2492892-2492911 | None:intergenic | 45.0% |
| !! | AGGGTTGGTTGGTTGGTTAA+GGG | + | chr8.2:2491774-2491793 | MS.gene061205:intron | 45.0% |
| !! | AGTTAGGTGGTAGTGGTACA+TGG | - | chr8.2:2492320-2492339 | None:intergenic | 45.0% |
| !! | TATGTAGAGGGTTGGTTGGT+TGG | + | chr8.2:2491767-2491786 | MS.gene061205:intron | 45.0% |
| !! | ATATAAAATAAAAAAATTCT+GGG | - | chr8.2:2492412-2492431 | None:intergenic | 5.0% |
| !! | TAAAATTGAAAAAATTAATA+AGG | - | chr8.2:2492237-2492256 | None:intergenic | 5.0% |
| !! | TATATAAAATAAAAAAATTC+TGG | - | chr8.2:2492413-2492432 | None:intergenic | 5.0% |
| GAGAAGGAACGGAAGAAGGA+AGG | - | chr8.2:2492563-2492582 | None:intergenic | 50.0% | |
| GATGATGAACGGCATGCCTT+TGG | - | chr8.2:2491298-2491317 | None:intergenic | 50.0% | |
| GTGAGGGAACAGAAGAGAGA+AGG | - | chr8.2:2492579-2492598 | None:intergenic | 50.0% | |
| TCAGGTGCTAGCTAGCTGAA+GGG | + | chr8.2:2491691-2491710 | MS.gene061205:intron | 50.0% | |
| TTCAGGTGCTAGCTAGCTGA+AGG | + | chr8.2:2491690-2491709 | MS.gene061205:intron | 50.0% | |
| ! | AGAGCTTCTGGAGATGCAAG+TGG | + | chr8.2:2491385-2491404 | MS.gene061205:CDS | 50.0% |
| ! | GAGCTTCTGGAGATGCAAGT+GGG | + | chr8.2:2491386-2491405 | MS.gene061205:CDS | 50.0% |
| ! | GAGTTTGGTGGAGAAGACTG+GGG | + | chr8.2:2491235-2491254 | MS.gene061205:CDS | 50.0% |
| ! | GATGAGTTACCGAGCTTTGG+AGG | + | chr8.2:2492914-2492933 | MS.gene061205:CDS | 50.0% |
| ! | GGAGTTTGGTGGAGAAGACT+GGG | + | chr8.2:2491234-2491253 | MS.gene061205:CDS | 50.0% |
| ! | TATTCCACACGACGCCGTTT+TGG | - | chr8.2:2492699-2492718 | None:intergenic | 50.0% |
| ! | TGGAGTTTGGTGGAGAAGAC+TGG | + | chr8.2:2491233-2491252 | MS.gene061205:CDS | 50.0% |
| ! | TTCTGGAGATGCAAGTGGGA+AGG | + | chr8.2:2491390-2491409 | MS.gene061205:CDS | 50.0% |
| !! | GAGGGTTGGTTGGTTGGTTA+AGG | + | chr8.2:2491773-2491792 | MS.gene061205:intron | 50.0% |
| ACCGTCCTCGCCTACCAAAA+CGG | + | chr8.2:2492682-2492701 | MS.gene061205:intron | 55.0% | |
| ! | AGGCGAGGACGGTTTTGCTT+TGG | - | chr8.2:2492675-2492694 | None:intergenic | 55.0% |
| ! | GAACGGCATGCCTTTGGCTT+CGG | - | chr8.2:2491292-2491311 | None:intergenic | 55.0% |
| CCTACCAAAACGGCGTCGTG+TGG | + | chr8.2:2492692-2492711 | MS.gene061205:intron | 60.0% | |
| !! | CCACACGACGCCGTTTTGGT+AGG | - | chr8.2:2492695-2492714 | None:intergenic | 60.0% |
| !! | GCCGTTTTGGTAGGCGAGGA+CGG | - | chr8.2:2492686-2492705 | None:intergenic | 60.0% |
| !! | CGACGCCGTTTTGGTAGGCG+AGG | - | chr8.2:2492690-2492709 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 2491202 | 2492943 | 2491202 | ID=MS.gene061205 |
| chr8.2 | mRNA | 2491202 | 2492943 | 2491202 | ID=MS.gene061205.t1;Parent=MS.gene061205 |
| chr8.2 | exon | 2491202 | 2491411 | 2491202 | ID=MS.gene061205.t1.exon1;Parent=MS.gene061205.t1 |
| chr8.2 | CDS | 2491202 | 2491411 | 2491202 | ID=cds.MS.gene061205.t1;Parent=MS.gene061205.t1 |
| chr8.2 | exon | 2492860 | 2492943 | 2492860 | ID=MS.gene061205.t1.exon2;Parent=MS.gene061205.t1 |
| chr8.2 | CDS | 2492860 | 2492943 | 2492860 | ID=cds.MS.gene061205.t1;Parent=MS.gene061205.t1 |
| Gene Sequence |
| Protein sequence |
