Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37917.t1 | XP_013461691.1 | 98.6 | 287 | 4 | 0 | 1 | 287 | 1 | 287 | 2.30E-150 | 542.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37917.t1 | O04492 | 59.3 | 221 | 87 | 2 | 3 | 221 | 2 | 221 | 4.5e-62 | 240.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37917.t1 | A0A072V205 | 98.6 | 287 | 4 | 0 | 1 | 287 | 1 | 287 | 1.7e-150 | 542.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene37917 | 0.811574 | 6.54E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene37917 | 0.815796 | 7.70E-52 | -1.69E-46 |
| MS.gene049452 | MS.gene37917 | 0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene37917 | 0.830818 | 2.37E-55 | -1.69E-46 |
| MS.gene050221 | MS.gene37917 | 0.806391 | 8.41E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene37917 | 0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene37917 | 0.817167 | 3.79E-52 | -1.69E-46 |
| MS.gene050657 | MS.gene37917 | 0.829555 | 4.82E-55 | -1.69E-46 |
| MS.gene050737 | MS.gene37917 | 0.818522 | 1.88E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene37917 | 0.851861 | 6.73E-61 | -1.69E-46 |
| MS.gene050941 | MS.gene37917 | 0.802775 | 4.78E-49 | -1.69E-46 |
| MS.gene050962 | MS.gene37917 | 0.84464 | 6.67E-59 | -1.69E-46 |
| MS.gene051147 | MS.gene37917 | 0.803289 | 3.74E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene37917 | 0.821995 | 3.00E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene37917 | 0.810256 | 1.26E-50 | -1.69E-46 |
| MS.gene051490 | MS.gene37917 | 0.804547 | 2.05E-49 | -1.69E-46 |
| MS.gene051541 | MS.gene37917 | 0.825982 | 3.48E-54 | -1.69E-46 |
| MS.gene051800 | MS.gene37917 | 0.832834 | 7.54E-56 | -1.69E-46 |
| MS.gene052016 | MS.gene37917 | 0.846142 | 2.61E-59 | -1.69E-46 |
| MS.gene052037 | MS.gene37917 | 0.82259 | 2.18E-53 | -1.69E-46 |
| MS.gene052118 | MS.gene37917 | 0.802861 | 4.59E-49 | -1.69E-46 |
| MS.gene052311 | MS.gene37917 | 0.821706 | 3.50E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene37917 | 0.846122 | 2.65E-59 | -1.69E-46 |
| MS.gene052493 | MS.gene37917 | 0.824762 | 6.77E-54 | -1.69E-46 |
| MS.gene052674 | MS.gene37917 | 0.81992 | 9.01E-53 | -1.69E-46 |
| MS.gene052675 | MS.gene37917 | 0.824352 | 8.45E-54 | -1.69E-46 |
| MS.gene052677 | MS.gene37917 | 0.824575 | 7.49E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene37917 | 0.823443 | 1.38E-53 | -1.69E-46 |
| MS.gene053621 | MS.gene37917 | 0.821796 | 3.34E-53 | -1.69E-46 |
| MS.gene053726 | MS.gene37917 | 0.804385 | 2.22E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene37917 | 0.811542 | 6.64E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene37917 | 0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene054641 | MS.gene37917 | 0.844604 | 6.82E-59 | -1.69E-46 |
| MS.gene055327 | MS.gene37917 | 0.824531 | 7.67E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene37917 | 0.827471 | 1.54E-54 | -1.69E-46 |
| MS.gene05552 | MS.gene37917 | 0.802747 | 4.84E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene37917 | 0.817415 | 3.34E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene37917 | 0.845718 | 3.41E-59 | -1.69E-46 |
| MS.gene056308 | MS.gene37917 | 0.802056 | 6.72E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene37917 | 0.806511 | 7.94E-50 | -1.69E-46 |
| MS.gene056538 | MS.gene37917 | 0.809245 | 2.08E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene37917 | 0.805627 | 1.22E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene37917 | 0.802858 | 4.59E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene37917 | 0.816097 | 6.59E-52 | -1.69E-46 |
| MS.gene058429 | MS.gene37917 | 0.833392 | 5.48E-56 | -1.69E-46 |
| MS.gene058647 | MS.gene37917 | 0.809157 | 2.17E-50 | -1.69E-46 |
| MS.gene058681 | MS.gene37917 | 0.810205 | 1.29E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene37917 | 0.801353 | 9.37E-49 | -1.69E-46 |
| MS.gene059438 | MS.gene37917 | 0.81236 | 4.41E-51 | -1.69E-46 |
| MS.gene059439 | MS.gene37917 | 0.825907 | 3.63E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene37917 | 0.835886 | 1.29E-56 | -1.69E-46 |
| MS.gene059678 | MS.gene37917 | 0.82577 | 3.91E-54 | -1.69E-46 |
| MS.gene059924 | MS.gene37917 | 0.805154 | 1.53E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene37917 | 0.807363 | 5.24E-50 | -1.69E-46 |
| MS.gene060122 | MS.gene37917 | -0.847756 | 9.46E-60 | -1.69E-46 |
| MS.gene060125 | MS.gene37917 | -0.832873 | 7.37E-56 | -1.69E-46 |
| MS.gene06036 | MS.gene37917 | -0.807309 | 5.38E-50 | -1.69E-46 |
| MS.gene060373 | MS.gene37917 | 0.81282 | 3.50E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene37917 | 0.822311 | 2.54E-53 | -1.69E-46 |
| MS.gene060520 | MS.gene37917 | 0.801802 | 7.58E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene37917 | 0.89259 | 1.38E-74 | -1.69E-46 |
| MS.gene060850 | MS.gene37917 | 0.818123 | 2.31E-52 | -1.69E-46 |
| MS.gene060851 | MS.gene37917 | 0.82039 | 7.04E-53 | -1.69E-46 |
| MS.gene060852 | MS.gene37917 | 0.815847 | 7.50E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene37917 | 0.859902 | 3.00E-63 | -1.69E-46 |
| MS.gene061205 | MS.gene37917 | 0.820395 | 7.02E-53 | -1.69E-46 |
| MS.gene06121 | MS.gene37917 | 0.805661 | 1.20E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37917.t1 | MTR_3g100120 | 96.818 | 660 | 21 | 0 | 1 | 660 | 1 | 660 | 0.0 | 1305 |
| MS.gene37917.t1 | MTR_3g100120 | 96.526 | 662 | 21 | 1 | 1 | 660 | 1 | 662 | 0.0 | 1299 |
| MS.gene37917.t1 | MTR_7g114310 | 38.462 | 156 | 94 | 1 | 16 | 171 | 1 | 154 | 5.13e-25 | 109 |
| MS.gene37917.t1 | MTR_4g058990 | 37.500 | 152 | 93 | 1 | 16 | 167 | 1 | 150 | 1.63e-21 | 98.6 |
| MS.gene37917.t1 | MTR_2g094490 | 36.842 | 152 | 94 | 1 | 16 | 167 | 1 | 150 | 2.30e-21 | 97.4 |
| MS.gene37917.t1 | MTR_4g007820 | 34.177 | 158 | 100 | 2 | 17 | 174 | 28 | 181 | 1.37e-20 | 93.6 |
| MS.gene37917.t1 | MTR_5g079490 | 33.333 | 159 | 102 | 2 | 16 | 174 | 27 | 181 | 2.79e-19 | 90.5 |
| MS.gene37917.t1 | MTR_6g028020 | 35.625 | 160 | 89 | 4 | 15 | 171 | 131 | 279 | 3.41e-17 | 85.5 |
| MS.gene37917.t1 | MTR_6g028020 | 35.625 | 160 | 89 | 4 | 15 | 171 | 157 | 305 | 5.01e-17 | 85.1 |
| MS.gene37917.t1 | MTR_6g028020 | 35.625 | 160 | 89 | 4 | 15 | 171 | 157 | 305 | 5.03e-17 | 85.1 |
| MS.gene37917.t1 | MTR_3g079720 | 33.117 | 154 | 92 | 2 | 18 | 171 | 115 | 257 | 5.08e-16 | 80.9 |
| MS.gene37917.t1 | MTR_3g079700 | 31.169 | 154 | 99 | 2 | 18 | 171 | 417 | 563 | 1.30e-15 | 81.3 |
| MS.gene37917.t1 | MTR_3g079650 | 32.468 | 154 | 93 | 4 | 18 | 171 | 114 | 256 | 2.68e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37917.t1 | AT1G09700 | 64.362 | 188 | 66 | 1 | 10 | 197 | 9 | 195 | 8.24e-80 | 255 |
| MS.gene37917.t1 | AT1G09700 | 64.362 | 188 | 66 | 1 | 10 | 197 | 9 | 195 | 2.64e-78 | 256 |
| MS.gene37917.t1 | AT3G26932 | 40.385 | 156 | 91 | 1 | 16 | 171 | 1 | 154 | 6.41e-28 | 116 |
| MS.gene37917.t1 | AT3G26932 | 40.385 | 156 | 91 | 1 | 16 | 171 | 1 | 154 | 6.41e-28 | 116 |
| MS.gene37917.t1 | AT5G41070 | 32.243 | 214 | 125 | 3 | 16 | 229 | 1 | 194 | 5.78e-24 | 105 |
| MS.gene37917.t1 | AT2G28380 | 36.196 | 163 | 102 | 1 | 16 | 178 | 1 | 161 | 3.04e-22 | 100 |
| MS.gene37917.t1 | AT3G62800 | 31.839 | 223 | 135 | 5 | 15 | 237 | 3 | 208 | 1.01e-21 | 97.4 |
| MS.gene37917.t1 | AT3G62800 | 31.839 | 223 | 135 | 5 | 15 | 237 | 3 | 208 | 1.52e-21 | 97.1 |
| MS.gene37917.t1 | AT3G62800 | 31.839 | 223 | 135 | 5 | 15 | 237 | 3 | 208 | 1.52e-21 | 97.1 |
Find 139 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCCATGAACCTTCTTTC+AGG | 0.162473 | 3.3:-83084693 | MS.gene37917:CDS |
| TCTAAGAAATCACGCTTTAA+AGG | 0.215863 | 3.3:-83083573 | MS.gene37917:CDS |
| CTGTCATTCCATCCCGAAAA+AGG | 0.224505 | 3.3:-83083638 | MS.gene37917:CDS |
| ATTCCCAATATTGATCTCTT+TGG | 0.236860 | 3.3:+83082336 | None:intergenic |
| TCAGAAGTCATGAAGAATTC+TGG | 0.244468 | 3.3:-83082460 | MS.gene37917:CDS |
| CTGCTTCAGATTTGATTTCC+TGG | 0.251417 | 3.3:+83082491 | None:intergenic |
| CTGCTTCAGATTTGATTTCC+TGG | 0.251417 | 3.3:+83082698 | None:intergenic |
| CTGCTTCAGATTTGATTTCC+TGG | 0.251417 | 3.3:+83082803 | None:intergenic |
| AAGCGTGATTTCTTAGACTT+TGG | 0.266391 | 3.3:+83083579 | None:intergenic |
| CTGCTTCAGATTTGATTTCC+TGG | 0.267375 | 3.3:+83082593 | None:intergenic |
| ATTTCTATGCGGTTTCTTCT+TGG | 0.274727 | 3.3:+83083542 | None:intergenic |
| CTGCTTCAGATTTGATTTCC+TGG | 0.275383 | 3.3:+83083322 | None:intergenic |
| CTGCTTCAGATTTGATTTCC+TGG | 0.275383 | 3.3:+83083424 | None:intergenic |
| CAATCCAAAGAGATCAATAT+TGG | 0.281542 | 3.3:-83082340 | MS.gene37917:CDS |
| CTGCTTCAGATTTGACTTCC+TGG | 0.293244 | 3.3:+83082908 | None:intergenic |
| AGCTGCAGAGGTTGCTTTGA+TGG | 0.313250 | 3.3:-83084596 | MS.gene37917:CDS |
| CTGCTCCAGATTTGACTTCC+TGG | 0.313787 | 3.3:+83083220 | None:intergenic |
| CTGCTTCAGATTTAACTTCC+TGG | 0.322914 | 3.3:+83083118 | None:intergenic |
| GATGGAGCAAAGATCAATAA+TGG | 0.336169 | 3.3:-83083486 | MS.gene37917:CDS |
| TCCGTTCTCAGAATTCTTCA+TGG | 0.354796 | 3.3:+83083182 | None:intergenic |
| GCCATGCAGTATTATGATAA+TGG | 0.370303 | 3.3:-83083285 | MS.gene37917:CDS |
| ATTGGAGGGATGCTCTATAT+TGG | 0.371085 | 3.3:-83083771 | MS.gene37917:CDS |
| AGAGACATTAGCTGCAATAA+AGG | 0.374142 | 3.3:-83083031 | MS.gene37917:CDS |
| GAATTCTGCATGGCTTCATC+TGG | 0.378975 | 3.3:+83083087 | None:intergenic |
| ATTGTGCAAGAATTTACTTC+AGG | 0.382437 | 3.3:-83083892 | MS.gene37917:CDS |
| GGCCTCCAGGAAGTCAAATC+TGG | 0.396478 | 3.3:-83083225 | MS.gene37917:CDS |
| TCTGTGCATACTCTTGCAAT+TGG | 0.398490 | 3.3:+83084761 | None:intergenic |
| GCCATTGTATCAGAGCAAAA+AGG | 0.401184 | 3.3:-83083841 | MS.gene37917:CDS |
| TGACAGTCAAATGGCCAAAC+TGG | 0.404308 | 3.3:+83083655 | None:intergenic |
| TTGATGGAGTTGGCTAAAAC+TGG | 0.412242 | 3.3:-83084580 | MS.gene37917:CDS |
| CAGGCTTCTGAAAACCAGTT+TGG | 0.414886 | 3.3:-83083669 | MS.gene37917:CDS |
| TGCAATAAAGGAAGTCAAAT+CGG | 0.421774 | 3.3:-83083019 | MS.gene37917:CDS |
| CTAAGAAATCACGCTTTAAA+GGG | 0.422488 | 3.3:-83083572 | MS.gene37917:CDS |
| CCATGCAGAATTCTGAGAAC+GGG | 0.423049 | 3.3:-83082762 | MS.gene37917:CDS |
| CCATGCAGAATTCTGAGAAC+GGG | 0.423049 | 3.3:-83082867 | MS.gene37917:CDS |
| CAGAAGTCATGAAGAATTCT+GGG | 0.423704 | 3.3:-83082459 | MS.gene37917:CDS |
| CAATAATGGGGCAGAATCAC+TGG | 0.429446 | 3.3:-83083472 | MS.gene37917:CDS |
| TCAACCGTACACGAATATAA+TGG | 0.434098 | 3.3:+83083795 | None:intergenic |
| TTGACCTGAAAGAAGGTTCA+TGG | 0.434596 | 3.3:+83084689 | None:intergenic |
| ATGGAGCAAAGATCAATAAT+GGG | 0.435405 | 3.3:-83083485 | MS.gene37917:CDS |
| AGAGGTTGCTTTGATGGAGT+TGG | 0.436246 | 3.3:-83084590 | MS.gene37917:CDS |
| ACAGAATTGCAATGGAGATA+TGG | 0.444900 | 3.3:-83082248 | MS.gene37917:CDS |
| ACCTTGGAAATCTTCGTTAG+TGG | 0.448531 | 3.3:+83085817 | None:intergenic |
| GTTCGGTATGATTCTTTGAC+TGG | 0.460775 | 3.3:-83084649 | MS.gene37917:CDS |
| AATCCAAAGAGATCAATATT+GGG | 0.463678 | 3.3:-83082339 | MS.gene37917:CDS |
| CGGCATTGTCAGTGTTAATA+CGG | 0.467838 | 3.3:+83083511 | None:intergenic |
| AGAGACATTAGCTGCAGTCC+AGG | 0.469629 | 3.3:-83082611 | MS.gene37917:CDS |
| TGCTCCCGAGGGATACATAC+TGG | 0.470387 | 3.3:-83082293 | MS.gene37917:CDS |
| AAGCCTGGGATGCATTTGTC+TGG | 0.480978 | 3.3:+83083685 | None:intergenic |
| TGCAATGGAGATATGGTCTC+TGG | 0.488580 | 3.3:-83082241 | MS.gene37917:CDS |
| AGCAGAGCAGTCAGCTGCAG+AGG | 0.490356 | 3.3:-83084608 | MS.gene37917:CDS |
| TTCTGCATGGCTTCATCTGA+AGG | 0.494295 | 3.3:+83082880 | None:intergenic |
| TTCTGCATGGCTTCATCTGA+AGG | 0.494295 | 3.3:+83082985 | None:intergenic |
| GCAAGTGCTAATGATGAATC+TGG | 0.496570 | 3.3:-83083450 | MS.gene37917:CDS |
| AGAGACATTAGCTGCCATCC+AGG | 0.498082 | 3.3:-83082926 | MS.gene37917:CDS |
| TTCAGATTTGATTTCCTGGA+TGG | 0.500082 | 3.3:+83082702 | None:intergenic |
| GCCATGACAAATTCTGAAAA+CGG | 0.500363 | 3.3:-83082658 | MS.gene37917:CDS |
| TTCAGATTTGATTTCCTGGA+TGG | 0.500978 | 3.3:+83082807 | None:intergenic |
| TAATGATGAATCTGGCCTCC+AGG | 0.501653 | 3.3:-83083442 | MS.gene37917:CDS |
| TTCTGCATGGCTTCATCTGA+AGG | 0.502221 | 3.3:+83082775 | None:intergenic |
| ATTGATCTTTGCTCCATCAC+CGG | 0.505465 | 3.3:+83083491 | None:intergenic |
| AGAGACATTAGCTGGCCTCC+AGG | 0.509998 | 3.3:-83083136 | MS.gene37917:CDS |
| AGAGACATTAGCTGGCCTCC+AGG | 0.509998 | 3.3:-83083238 | MS.gene37917:CDS |
| ATCTTCGTTAGTGGTGGACA+TGG | 0.513170 | 3.3:+83085826 | None:intergenic |
| CATGAGAAAGAGACATTAGC+TGG | 0.514047 | 3.3:-83082517 | MS.gene37917:CDS |
| AACACTGACAATGCCGGTGA+TGG | 0.516496 | 3.3:-83083504 | MS.gene37917:CDS |
| ATCTGAAGCAGCATTCCCTT+CGG | 0.519137 | 3.3:-83083310 | MS.gene37917:CDS |
| CATGAGAAAGAGACATTAGC+TGG | 0.520527 | 3.3:-83083144 | MS.gene37917:CDS |
| AGAGACATTAGCTGCCATCC+AGG | 0.520770 | 3.3:-83082716 | MS.gene37917:CDS |
| GAATATAATGGTGCCCTACC+TGG | 0.523233 | 3.3:+83083807 | None:intergenic |
| CATCGCCAGTATGTATCCCT+CGG | 0.526633 | 3.3:+83082288 | None:intergenic |
| ATCACTGTTGACCTGAAAGA+AGG | 0.527088 | 3.3:+83084682 | None:intergenic |
| TTCAGATTTGACTTCCTGGA+TGG | 0.527890 | 3.3:+83082912 | None:intergenic |
| TCCTTAGTAGTTTCATACAC+AGG | 0.528972 | 3.3:+83084721 | None:intergenic |
| CAGTGATTATGAATGATGTT+CGG | 0.529179 | 3.3:-83084666 | MS.gene37917:CDS |
| TATTCGTGTACGGTTGACAT+TGG | 0.530174 | 3.3:-83083789 | MS.gene37917:CDS |
| ACCTGTGTATGAAACTACTA+AGG | 0.531516 | 3.3:-83084722 | MS.gene37917:CDS |
| AGAGACATTAGCTGGCCTCC+AGG | 0.532686 | 3.3:-83083340 | MS.gene37917:CDS |
| CATGAGAAAGAGACATTAGC+TGG | 0.534007 | 3.3:-83083348 | MS.gene37917:CDS |
| CATGAGAAAGAGACATTAGC+TGG | 0.534418 | 3.3:-83083246 | MS.gene37917:CDS |
| GATTATTCAAAACAAATGAC+TGG | 0.535856 | 3.3:+83082398 | None:intergenic |
| TCGTGTACGGTTGACATTGG+AGG | 0.535923 | 3.3:-83083786 | MS.gene37917:CDS |
| TATCCAGACAAATGCATCCC+AGG | 0.536475 | 3.3:-83083688 | MS.gene37917:CDS |
| CAAGAGTATGCACAGAAAGC+AGG | 0.538168 | 3.3:-83084754 | MS.gene37917:CDS |
| TTCTGCATGGCTTCATCTGG+AGG | 0.540711 | 3.3:+83083090 | None:intergenic |
| TTTGTCATGGCTTCATCTGA+AGG | 0.542263 | 3.3:+83082670 | None:intergenic |
| CGTGTACGGTTGACATTGGA+GGG | 0.543141 | 3.3:-83083785 | MS.gene37917:CDS |
| AGAGACATTAGCTGGCATCC+AGG | 0.543604 | 3.3:-83082509 | MS.gene37917:CDS |
| ATGAACAAACAGAATTGCAA+TGG | 0.547564 | 3.3:-83082256 | MS.gene37917:CDS |
| GAATTCTTCATGGCTTCTGA+AGG | 0.548362 | 3.3:+83083192 | None:intergenic |
| GGGATGGAATGACAGTCAAA+TGG | 0.548556 | 3.3:+83083646 | None:intergenic |
| CGTATTAACACTGACAATGC+CGG | 0.552052 | 3.3:-83083510 | MS.gene37917:CDS |
| GGATGACACACCACCAGGTA+GGG | 0.554430 | 3.3:-83083820 | MS.gene37917:CDS |
| ATCGCCAGTATGTATCCCTC+GGG | 0.555182 | 3.3:+83082289 | None:intergenic |
| GGCACCATTATATTCGTGTA+CGG | 0.559813 | 3.3:-83083799 | MS.gene37917:CDS |
| GGAGGGATGCTCTATATTGG+AGG | 0.559971 | 3.3:-83083768 | MS.gene37917:CDS |
| TCTGTTCTCAGAATTCATCA+TGG | 0.566590 | 3.3:+83082555 | None:intergenic |
| AGAAGTGTCATTTGCTCCCG+AGG | 0.566950 | 3.3:-83082305 | MS.gene37917:CDS |
| TCTTCGTTAGTGGTGGACAT+GGG | 0.567220 | 3.3:+83085827 | None:intergenic |
| GTGTATGAAACTACTAAGGA+AGG | 0.573469 | 3.3:-83084718 | MS.gene37917:CDS |
| TAATACTGCATGGCTTCCGA+AGG | 0.576922 | 3.3:+83083294 | None:intergenic |
| TCCATTATCATAATACTGCA+TGG | 0.577735 | 3.3:+83083284 | None:intergenic |
| TTGGAAATCTTCGTTAGTGG+TGG | 0.577745 | 3.3:+83085820 | None:intergenic |
| AACGGAATCTATTGCTGATG+AGG | 0.580454 | 3.3:-83083613 | MS.gene37917:CDS |
| AATTCTTCATGACTTCTGAA+AGG | 0.581745 | 3.3:+83082464 | None:intergenic |
| CTTCAGATTTGATTTCCTGG+AGG | 0.587651 | 3.3:+83083325 | None:intergenic |
| CTTCAGATTTGATTTCCTGG+AGG | 0.587651 | 3.3:+83083427 | None:intergenic |
| GCCATGCAGAATTCTGAGAA+CGG | 0.591866 | 3.3:-83082763 | MS.gene37917:CDS |
| GCCATGCAGAATTCTGAGAA+CGG | 0.591866 | 3.3:-83082868 | MS.gene37917:CDS |
| TTGTCATGGCTTCATCTGAA+GGG | 0.594389 | 3.3:+83082671 | None:intergenic |
| TGACCTGAAAGAAGGTTCAT+GGG | 0.594942 | 3.3:+83084690 | None:intergenic |
| CCCGTTCTCAGAATTCTGCA+TGG | 0.596419 | 3.3:+83082762 | None:intergenic |
| CCCGTTCTCAGAATTCTGCA+TGG | 0.596419 | 3.3:+83082867 | None:intergenic |
| TCCGTTCTCAGAATTCTGCA+TGG | 0.602147 | 3.3:+83082972 | None:intergenic |
| CTGAAAGAAGGTTCATGGGA+AGG | 0.602671 | 3.3:+83084694 | None:intergenic |
| TCCGTTCTCAGAATTCTGCA+TGG | 0.609171 | 3.3:+83083077 | None:intergenic |
| AGGATGACACACCACCAGGT+AGG | 0.617789 | 3.3:-83083821 | MS.gene37917:CDS |
| TCTGCATGGCTTCATCTGAA+GGG | 0.618565 | 3.3:+83082881 | None:intergenic |
| TCTGCATGGCTTCATCTGAA+GGG | 0.618565 | 3.3:+83082986 | None:intergenic |
| ATACATACTGGCGATGAGCG+TGG | 0.622245 | 3.3:-83082281 | MS.gene37917:CDS |
| GAAGTGTCATTTGCTCCCGA+GGG | 0.622643 | 3.3:-83082304 | MS.gene37917:CDS |
| CTCCAGATTTGACTTCCTGG+AGG | 0.623620 | 3.3:+83083223 | None:intergenic |
| AGCTAATAAAGCAGTTCTCG+CGG | 0.626972 | 3.3:+83083710 | None:intergenic |
| GCCATGAAGAATTCTGAGAA+CGG | 0.628543 | 3.3:-83083183 | MS.gene37917:CDS |
| TATGCACAGAAAGCAGGACT+CGG | 0.629186 | 3.3:-83084748 | MS.gene37917:CDS |
| TCTGCATGGCTTCATCTGGA+GGG | 0.629877 | 3.3:+83083091 | None:intergenic |
| AGAGACGTTAGCTACCATCC+AGG | 0.630811 | 3.3:-83082821 | MS.gene37917:CDS |
| AATTCATCATGGCTTCTGAA+CGG | 0.632601 | 3.3:+83082566 | None:intergenic |
| GCCATGCAGAATTCTGAGAA+CGG | 0.638030 | 3.3:-83082973 | MS.gene37917:CDS |
| GCCATGCAGAATTCTGAGAA+CGG | 0.638440 | 3.3:-83083078 | MS.gene37917:CDS |
| CGGCGCTTCTTATTTCTATG+CGG | 0.647948 | 3.3:+83083531 | None:intergenic |
| TGTATGAAACTACTAAGGAA+GGG | 0.648493 | 3.3:-83084717 | MS.gene37917:CDS |
| AATACTGCATGGCTTCCGAA+GGG | 0.654813 | 3.3:+83083295 | None:intergenic |
| ACCACTAACGAAGATTTCCA+AGG | 0.657994 | 3.3:-83085818 | MS.gene37917:intron |
| CTTCAGATTTAACTTCCTGG+AGG | 0.663895 | 3.3:+83083121 | None:intergenic |
| CATGCAGAATTCTGAGAACG+GGG | 0.674016 | 3.3:-83082761 | MS.gene37917:CDS |
| CATGCAGAATTCTGAGAACG+GGG | 0.674016 | 3.3:-83082866 | MS.gene37917:CDS |
| TGGAGCAAAGATCAATAATG+GGG | 0.701368 | 3.3:-83083484 | MS.gene37917:CDS |
| TATAATGGTGCCCTACCTGG+TGG | 0.785345 | 3.3:+83083810 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAATTATAATTTTTTTGT+TGG | - | chr3.3:83083545-83083564 | MS.gene37917:CDS | 10.0% |
| !! | ACAAAAATTAAACTTTCATA+GGG | - | chr3.3:83083162-83083181 | MS.gene37917:CDS | 15.0% |
| !!! | ATTTGAAGTTTTTATTTTGT+GGG | - | chr3.3:83083638-83083657 | MS.gene37917:CDS | 15.0% |
| !!! | TATTTGAAGTTTTTATTTTG+TGG | - | chr3.3:83083637-83083656 | MS.gene37917:CDS | 15.0% |
| !!! | TATTTTCAGAAGAATAATAT+TGG | + | chr3.3:83083884-83083903 | None:intergenic | 15.0% |
| !! | AATCAAAGATCAAGTATTAT+GGG | + | chr3.3:83082387-83082406 | None:intergenic | 20.0% |
| !! | CAACGAGAATTATATTAAAT+CGG | - | chr3.3:83082927-83082946 | MS.gene37917:CDS | 20.0% |
| !! | GACAAAAATTAAACTTTCAT+AGG | - | chr3.3:83083161-83083180 | MS.gene37917:CDS | 20.0% |
| !!! | TATTTGCTTTCTTTTTTAAG+TGG | - | chr3.3:83083243-83083262 | MS.gene37917:CDS | 20.0% |
| ! | AATCCAAAGAGATCAATATT+GGG | - | chr3.3:83085719-83085738 | MS.gene37917:intron | 25.0% |
| ! | ACAAGTAAATAGTTAATCCT+TGG | - | chr3.3:83082962-83082981 | MS.gene37917:CDS | 25.0% |
| ! | ACTGTTGCATATTATATTTG+AGG | - | chr3.3:83084010-83084029 | MS.gene37917:intron | 25.0% |
| ! | ATATCTAGTGAAAATCGAAT+AGG | + | chr3.3:83084039-83084058 | None:intergenic | 25.0% |
| ! | ATGTGAAAAATAATCTGCAA+CGG | + | chr3.3:83083599-83083618 | None:intergenic | 25.0% |
| ! | CAATCAAAGATCAAGTATTA+TGG | + | chr3.3:83082388-83082407 | None:intergenic | 25.0% |
| ! | CATCTCATTATAAACTATCA+AGG | + | chr3.3:83083983-83084002 | None:intergenic | 25.0% |
| ! | CGATTTAATATAATTCTCGT+TGG | + | chr3.3:83082929-83082948 | None:intergenic | 25.0% |
| ! | GATTATTCAAAACAAATGAC+TGG | + | chr3.3:83085663-83085682 | None:intergenic | 25.0% |
| ! | TATCTAGTGAAAATCGAATA+GGG | + | chr3.3:83084038-83084057 | None:intergenic | 25.0% |
| ! | TATGAATACAGAACTTAGTA+AGG | + | chr3.3:83084067-83084086 | None:intergenic | 25.0% |
| ! | TTTCAGTTATGATTCATACT+CGG | - | chr3.3:83082691-83082710 | MS.gene37917:CDS | 25.0% |
| !! | AATTTTTCATGACTTCTGAA+GGG | + | chr3.3:83084664-83084683 | None:intergenic | 25.0% |
| !! | GGAATATAAAATAGAAGCAT+TGG | + | chr3.3:83082366-83082385 | None:intergenic | 25.0% |
| !! | TTTGAAAATTGACTCTAGTA+AGG | - | chr3.3:83082853-83082872 | MS.gene37917:CDS | 25.0% |
| !!! | AAGCCTTTTTTAACAAAGTT+GGG | + | chr3.3:83083024-83083043 | None:intergenic | 25.0% |
| !!! | AATCAAGAGAATTTTGAAAG+TGG | - | chr3.3:83085679-83085698 | MS.gene37917:intron | 25.0% |
| !!! | ATATAAAATAGAAGCATTGG+TGG | + | chr3.3:83082363-83082382 | None:intergenic | 25.0% |
| !!! | ATCAAGAGAATTTTGAAAGT+GGG | - | chr3.3:83085680-83085699 | MS.gene37917:intron | 25.0% |
| !!! | GATCTTTGATTGTTTTGAAT+GGG | - | chr3.3:83082417-83082436 | MS.gene37917:CDS | 25.0% |
| !!! | TCTGGTTCTGATTATTTTAA+TGG | - | chr3.3:83084119-83084138 | MS.gene37917:intron | 25.0% |
| !!! | TGATCTTTGATTGTTTTGAA+TGG | - | chr3.3:83082416-83082435 | MS.gene37917:CDS | 25.0% |
| AAATAGTTAATCCTTGGACA+GGG | - | chr3.3:83082968-83082987 | MS.gene37917:CDS | 30.0% | |
| AAATTAAACTTTCATAGGGC+AGG | - | chr3.3:83083166-83083185 | MS.gene37917:CDS | 30.0% | |
| AAGTTGAAAGTAGAAAAGAC+AGG | + | chr3.3:83083671-83083690 | None:intergenic | 30.0% | |
| AATTCTTCATGACTTCTGAA+AGG | + | chr3.3:83085597-83085616 | None:intergenic | 30.0% | |
| ACCTTAGAGAAAACCTAAAT+CGG | + | chr3.3:83083123-83083142 | None:intergenic | 30.0% | |
| ACTACTTAAGTTCAATCACT+TGG | - | chr3.3:83082751-83082770 | MS.gene37917:CDS | 30.0% | |
| ATGAACAAACAGAATTGCAA+TGG | - | chr3.3:83085802-83085821 | MS.gene37917:intron | 30.0% | |
| ATGGAGCAAAGATCAATAAT+GGG | - | chr3.3:83084573-83084592 | MS.gene37917:CDS | 30.0% | |
| ATTCCCAATATTGATCTCTT+TGG | + | chr3.3:83085725-83085744 | None:intergenic | 30.0% | |
| ATTGTGCAAGAATTTACTTC+AGG | - | chr3.3:83084166-83084185 | MS.gene37917:intron | 30.0% | |
| CAACCCAACTTTGTTAAAAA+AGG | - | chr3.3:83083018-83083037 | MS.gene37917:CDS | 30.0% | |
| CAATCCAAAGAGATCAATAT+TGG | - | chr3.3:83085718-83085737 | MS.gene37917:intron | 30.0% | |
| CAGTGATTATGAATGATGTT+CGG | - | chr3.3:83083392-83083411 | MS.gene37917:CDS | 30.0% | |
| CTCTCTAAATGTCTAACTAT+TGG | + | chr3.3:83082905-83082924 | None:intergenic | 30.0% | |
| GAGAATAATAGTTAGTACCT+TGG | + | chr3.3:83082260-83082279 | None:intergenic | 30.0% | |
| TAAATAGTTAATCCTTGGAC+AGG | - | chr3.3:83082967-83082986 | MS.gene37917:CDS | 30.0% | |
| TCCATTATCATAATACTGCA+TGG | + | chr3.3:83084777-83084796 | None:intergenic | 30.0% | |
| TCTAAGAAATCACGCTTTAA+AGG | - | chr3.3:83084485-83084504 | MS.gene37917:intron | 30.0% | |
| TGAAACAATTACAGACCAAA+AGG | + | chr3.3:83082676-83082695 | None:intergenic | 30.0% | |
| TGATTCATCTTATAGAGTGA+TGG | - | chr3.3:83082554-83082573 | MS.gene37917:CDS | 30.0% | |
| TGCAATAAAGGAAGTCAAAT+CGG | - | chr3.3:83085039-83085058 | MS.gene37917:intron | 30.0% | |
| TGTATGAAACTACTAAGGAA+GGG | - | chr3.3:83083341-83083360 | MS.gene37917:CDS | 30.0% | |
| TTAAGTCAGATGTTGAATGA+AGG | + | chr3.3:83083205-83083224 | None:intergenic | 30.0% | |
| TTAGCTAATCAACGTAAAGA+TGG | + | chr3.3:83083715-83083734 | None:intergenic | 30.0% | |
| TTCAGTTATGATTCATACTC+GGG | - | chr3.3:83082692-83082711 | MS.gene37917:CDS | 30.0% | |
| TTGTAAAGACTACTTACAAC+AGG | + | chr3.3:83083529-83083548 | None:intergenic | 30.0% | |
| TTTGTTAAAAAAGGCTTCAG+TGG | - | chr3.3:83083027-83083046 | MS.gene37917:CDS | 30.0% | |
| ! | AAAATTGACTCTAGTAAGGA+GGG | - | chr3.3:83082857-83082876 | MS.gene37917:CDS | 30.0% |
| ! | ATAGAGTGATGGAAGATAAA+GGG | - | chr3.3:83082565-83082584 | MS.gene37917:CDS | 30.0% |
| ! | CTAAGAAATCACGCTTTAAA+GGG | - | chr3.3:83084486-83084505 | MS.gene37917:intron | 30.0% |
| ! | CTTTTTCTTTTACTTTCCCA+GGG | - | chr3.3:83082283-83082302 | MS.gene37917:CDS | 30.0% |
| ! | GAATTTTTCATGACTTCTGA+AGG | + | chr3.3:83084665-83084684 | None:intergenic | 30.0% |
| ! | GCGAGTTATTGTATATTTTC+TGG | - | chr3.3:83084101-83084120 | MS.gene37917:intron | 30.0% |
| ! | GTCATGAAAAATTCTGAGAA+CGG | - | chr3.3:83084671-83084690 | MS.gene37917:CDS | 30.0% |
| ! | GTGAACGATTATTTCTTAAC+TGG | - | chr3.3:83082719-83082738 | MS.gene37917:CDS | 30.0% |
| ! | TATAGAGTGATGGAAGATAA+AGG | - | chr3.3:83082564-83082583 | MS.gene37917:CDS | 30.0% |
| ! | TCTTTACGTTGATTAGCTAA+TGG | - | chr3.3:83083715-83083734 | MS.gene37917:CDS | 30.0% |
| !! | CATTGTTTTGTTGATGTGAT+TGG | - | chr3.3:83083778-83083797 | MS.gene37917:CDS | 30.0% |
| !! | CTTTTTGGTCTTTAACCTTT+TGG | - | chr3.3:83082658-83082677 | MS.gene37917:CDS | 30.0% |
| !!! | CTTTTTTAACAAAGTTGGGT+TGG | + | chr3.3:83083020-83083039 | None:intergenic | 30.0% |
| !!! | GAAGCCTTTTTTAACAAAGT+TGG | + | chr3.3:83083025-83083044 | None:intergenic | 30.0% |
| !!! | TGCTTTCTTTTTTAAGTGGT+AGG | - | chr3.3:83083247-83083266 | MS.gene37917:CDS | 30.0% |
| AAGATTTGAGAAGCAACAAG+TGG | - | chr3.3:83083097-83083116 | MS.gene37917:CDS | 35.0% | |
| AAGCGTGATTTCTTAGACTT+TGG | + | chr3.3:83084482-83084501 | None:intergenic | 35.0% | |
| AATTCATCATGGCTTCTGAA+CGG | + | chr3.3:83085495-83085514 | None:intergenic | 35.0% | |
| ACAGAATTGCAATGGAGATA+TGG | - | chr3.3:83085810-83085829 | MS.gene37917:intron | 35.0% | |
| ACCTGTGTATGAAACTACTA+AGG | - | chr3.3:83083336-83083355 | MS.gene37917:CDS | 35.0% | |
| AGAGACATTAGCTGCAATAA+AGG | - | chr3.3:83085027-83085046 | MS.gene37917:intron | 35.0% | |
| AGGAACAGCAAAAACAAAGA+GGG | - | chr3.3:83084310-83084329 | MS.gene37917:intron | 35.0% | |
| ATTTCTATGCGGTTTCTTCT+TGG | + | chr3.3:83084519-83084538 | None:intergenic | 35.0% | |
| CAGAAGTCATGAAGAATTCT+GGG | - | chr3.3:83085599-83085618 | MS.gene37917:intron | 35.0% | |
| CCTGGGAAAGTAAAAGAAAA+AGG | + | chr3.3:83082285-83082304 | None:intergenic | 35.0% | |
| CTACTTTCAACTTTCAAGAG+TGG | - | chr3.3:83083678-83083697 | MS.gene37917:CDS | 35.0% | |
| GATGGAGCAAAGATCAATAA+TGG | - | chr3.3:83084572-83084591 | MS.gene37917:CDS | 35.0% | |
| GCCATGCAGTATTATGATAA+TGG | - | chr3.3:83084773-83084792 | MS.gene37917:CDS | 35.0% | |
| GCTTCTCAAATCTTACATCT+TGG | + | chr3.3:83083091-83083110 | None:intergenic | 35.0% | |
| GTGTATGAAACTACTAAGGA+AGG | - | chr3.3:83083340-83083359 | MS.gene37917:CDS | 35.0% | |
| GTTCTTAGTATGCAACAGTT+TGG | - | chr3.3:83083751-83083770 | MS.gene37917:CDS | 35.0% | |
| TCAACCGTACACGAATATAA+TGG | + | chr3.3:83084266-83084285 | None:intergenic | 35.0% | |
| TCACATTTCTTCAGCTCATT+GGG | - | chr3.3:83083613-83083632 | MS.gene37917:CDS | 35.0% | |
| TCAGAAGTCATGAAGAATTC+TGG | - | chr3.3:83085598-83085617 | MS.gene37917:intron | 35.0% | |
| TCCTAGAATGCATCTATTTC+AGG | + | chr3.3:83083068-83083087 | None:intergenic | 35.0% | |
| TCCTGAAATAGATGCATTCT+AGG | - | chr3.3:83083064-83083083 | MS.gene37917:CDS | 35.0% | |
| TCCTTAGTAGTTTCATACAC+AGG | + | chr3.3:83083340-83083359 | None:intergenic | 35.0% | |
| TCTGTTCTCAGAATTCATCA+TGG | + | chr3.3:83085506-83085525 | None:intergenic | 35.0% | |
| TGGAGCAAAGATCAATAATG+GGG | - | chr3.3:83084574-83084593 | MS.gene37917:CDS | 35.0% | |
| TTCACATTTCTTCAGCTCAT+TGG | - | chr3.3:83083612-83083631 | MS.gene37917:CDS | 35.0% | |
| ! | AATCAAGTGTTTCTGTCCTA+GGG | + | chr3.3:83082539-83082558 | None:intergenic | 35.0% |
| ! | AGTTCAATCACTTGGTTTGA+AGG | - | chr3.3:83082759-83082778 | MS.gene37917:CDS | 35.0% |
| ! | CCTTTTTCTTTTACTTTCCC+AGG | - | chr3.3:83082282-83082301 | MS.gene37917:CDS | 35.0% |
| ! | GAAAATTGACTCTAGTAAGG+AGG | - | chr3.3:83082856-83082875 | MS.gene37917:CDS | 35.0% |
| ! | GCCATGACAAATTCTGAAAA+CGG | - | chr3.3:83085400-83085419 | MS.gene37917:intron | 35.0% |
| ! | GTTCAATCACTTGGTTTGAA+GGG | - | chr3.3:83082760-83082779 | MS.gene37917:CDS | 35.0% |
| ! | TCCGTTTTCAGAATTTGTCA+TGG | + | chr3.3:83085404-83085423 | None:intergenic | 35.0% |
| ! | TCCTTTTTGCTCTGATACAA+TGG | + | chr3.3:83084221-83084240 | None:intergenic | 35.0% |
| ! | TTCAATCACTTGGTTTGAAG+GGG | - | chr3.3:83082761-83082780 | MS.gene37917:CDS | 35.0% |
| ! | TTCAGATTTGATTTCCTGGA+TGG | + | chr3.3:83084633-83084652 | None:intergenic | 35.0% |
| !! | TAAACTTGTTGCAACGATCT+AGG | - | chr3.3:83082511-83082530 | MS.gene37917:CDS | 35.0% |
| !! | TAAGGAGGGTTGATGATTAA+CGG | - | chr3.3:83082871-83082890 | MS.gene37917:CDS | 35.0% |
| AACGGAATCTATTGCTGATG+AGG | - | chr3.3:83084445-83084464 | MS.gene37917:intron | 40.0% | |
| ACCACTAACGAAGATTTCCA+AGG | - | chr3.3:83082240-83082259 | MS.gene37917:CDS | 40.0% | |
| ACCTTGGAAATCTTCGTTAG+TGG | + | chr3.3:83082244-83082263 | None:intergenic | 40.0% | |
| AGCTAATAAAGCAGTTCTCG+CGG | + | chr3.3:83084351-83084370 | None:intergenic | 40.0% | |
| ATCACTGTTGACCTGAAAGA+AGG | + | chr3.3:83083379-83083398 | None:intergenic | 40.0% | |
| ATTGATCTTTGCTCCATCAC+CGG | + | chr3.3:83084570-83084589 | None:intergenic | 40.0% | |
| ATTGGAGGGATGCTCTATAT+TGG | - | chr3.3:83084287-83084306 | MS.gene37917:intron | 40.0% | |
| CATGAGAAAGAGACATTAGC+TGG | - | chr3.3:83084710-83084729 | MS.gene37917:CDS | 40.0% | |
| CGGCATTGTCAGTGTTAATA+CGG | + | chr3.3:83084550-83084569 | None:intergenic | 40.0% | |
| CGTATTAACACTGACAATGC+CGG | - | chr3.3:83084548-83084567 | MS.gene37917:intron | 40.0% | |
| GAATTCTTCATGGCTTCTGA+AGG | + | chr3.3:83084869-83084888 | None:intergenic | 40.0% | |
| GAGGAACAGCAAAAACAAAG+AGG | - | chr3.3:83084309-83084328 | MS.gene37917:intron | 40.0% | |
| GCAAGTGCTAATGATGAATC+TGG | - | chr3.3:83084608-83084627 | MS.gene37917:CDS | 40.0% | |
| GCCATTGTATCAGAGCAAAA+AGG | - | chr3.3:83084217-83084236 | MS.gene37917:intron | 40.0% | |
| GGAGGGAGGAAAAAAAATGA+GGG | - | chr3.3:83082601-83082620 | MS.gene37917:CDS | 40.0% | |
| GGCACCATTATATTCGTGTA+CGG | - | chr3.3:83084259-83084278 | MS.gene37917:intron | 40.0% | |
| GTTCGGTATGATTCTTTGAC+TGG | - | chr3.3:83083409-83083428 | MS.gene37917:CDS | 40.0% | |
| TATTCGTGTACGGTTGACAT+TGG | - | chr3.3:83084269-83084288 | MS.gene37917:intron | 40.0% | |
| TCCGTTCTCAGAATTCTTCA+TGG | + | chr3.3:83084879-83084898 | None:intergenic | 40.0% | |
| TCTGTGCATACTCTTGCAAT+TGG | + | chr3.3:83083300-83083319 | None:intergenic | 40.0% | |
| TGACCTGAAAGAAGGTTCAT+GGG | + | chr3.3:83083371-83083390 | None:intergenic | 40.0% | |
| TGGAGGGAGGAAAAAAAATG+AGG | - | chr3.3:83082600-83082619 | MS.gene37917:CDS | 40.0% | |
| TGTCATTCCATCCCGAAAAA+GGG | - | chr3.3:83084421-83084440 | MS.gene37917:intron | 40.0% | |
| TTGACCTGAAAGAAGGTTCA+TGG | + | chr3.3:83083372-83083391 | None:intergenic | 40.0% | |
| TTGATGGAGTTGGCTAAAAC+TGG | - | chr3.3:83083478-83083497 | MS.gene37917:CDS | 40.0% | |
| TTGGAAATCTTCGTTAGTGG+TGG | + | chr3.3:83082241-83082260 | None:intergenic | 40.0% | |
| TTGTCATGGCTTCATCTGAA+GGG | + | chr3.3:83085390-83085409 | None:intergenic | 40.0% | |
| TTTGTCATGGCTTCATCTGA+AGG | + | chr3.3:83085391-83085410 | None:intergenic | 40.0% | |
| ! | CTGCTTCAGATTTAACTTCC+TGG | + | chr3.3:83084943-83084962 | None:intergenic | 40.0% |
| ! | CTGCTTCAGATTTGATTTCC+TGG | + | chr3.3:83084637-83084656 | None:intergenic | 40.0% |
| ! | CTTCAGATTTAACTTCCTGG+AGG | + | chr3.3:83084940-83084959 | None:intergenic | 40.0% |
| ! | CTTCAGATTTGATTTCCTGG+AGG | + | chr3.3:83084634-83084653 | None:intergenic | 40.0% |
| ! | GAATCAAGTGTTTCTGTCCT+AGG | + | chr3.3:83082540-83082559 | None:intergenic | 40.0% |
| ! | GAGGGGTCAGAATTTCTTTT+TGG | - | chr3.3:83082643-83082662 | MS.gene37917:CDS | 40.0% |
| ! | GCCATGAAGAATTCTGAGAA+CGG | - | chr3.3:83084875-83084894 | MS.gene37917:intron | 40.0% |
| ! | GTTTTCTTCCAGCATGAAAC+TGG | - | chr3.3:83084143-83084162 | MS.gene37917:intron | 40.0% |
| ! | TAGATTCCGTTGCCCTTTTT+CGG | + | chr3.3:83084436-83084455 | None:intergenic | 40.0% |
| ! | TTCAGATTTGACTTCCTGGA+TGG | + | chr3.3:83085149-83085168 | None:intergenic | 40.0% |
| !! | GCCGATTTAGGTTTTCTCTA+AGG | - | chr3.3:83083119-83083138 | MS.gene37917:CDS | 40.0% |
| !! | TAATATTGGTGACGAGCTCA+CGG | + | chr3.3:83083870-83083889 | None:intergenic | 40.0% |
| !!! | AAACTGGTTTTCAGAAGCCT+GGG | + | chr3.3:83084390-83084409 | None:intergenic | 40.0% |
| AAAAAGGATGACACACCACC+AGG | - | chr3.3:83084233-83084252 | MS.gene37917:intron | 45.0% | |
| AATACTGCATGGCTTCCGAA+GGG | + | chr3.3:83084766-83084785 | None:intergenic | 45.0% | |
| ATGGAAGATAAAGGGAGTGG+AGG | - | chr3.3:83082573-83082592 | MS.gene37917:CDS | 45.0% | |
| CTGAAAGAAGGTTCATGGGA+AGG | + | chr3.3:83083367-83083386 | None:intergenic | 45.0% | |
| CTGTCATTCCATCCCGAAAA+AGG | - | chr3.3:83084420-83084439 | MS.gene37917:intron | 45.0% | |
| CTTCCCATGAACCTTCTTTC+AGG | - | chr3.3:83083365-83083384 | MS.gene37917:CDS | 45.0% | |
| GAATATAATGGTGCCCTACC+TGG | + | chr3.3:83084254-83084273 | None:intergenic | 45.0% | |
| GAATTCTGCATGGCTTCATC+TGG | + | chr3.3:83084974-83084993 | None:intergenic | 45.0% | |
| GCGTTGCAAAAACAAACCCT+GGG | + | chr3.3:83082302-83082321 | None:intergenic | 45.0% | |
| GGGATGGAATGACAGTCAAA+TGG | + | chr3.3:83084415-83084434 | None:intergenic | 45.0% | |
| TAATACTGCATGGCTTCCGA+AGG | + | chr3.3:83084767-83084786 | None:intergenic | 45.0% | |
| TAATGATGAATCTGGCCTCC+AGG | - | chr3.3:83084616-83084635 | MS.gene37917:CDS | 45.0% | |
| TATCCAGACAAATGCATCCC+AGG | - | chr3.3:83084370-83084389 | MS.gene37917:intron | 45.0% | |
| TATGCACAGAAAGCAGGACT+CGG | - | chr3.3:83083310-83083329 | MS.gene37917:CDS | 45.0% | |
| TCCGTTCTCAGAATTCTGCA+TGG | + | chr3.3:83084984-83085003 | None:intergenic | 45.0% | |
| TCTGCATGGCTTCATCTGAA+GGG | + | chr3.3:83085075-83085094 | None:intergenic | 45.0% | |
| TGACAGTCAAATGGCCAAAC+TGG | + | chr3.3:83084406-83084425 | None:intergenic | 45.0% | |
| TGCAATGGAGATATGGTCTC+TGG | - | chr3.3:83085817-83085836 | MS.gene37917:intron | 45.0% | |
| TGCACAATCCAGTTTCATGC+TGG | + | chr3.3:83084154-83084173 | None:intergenic | 45.0% | |
| TGCGTTGCAAAAACAAACCC+TGG | + | chr3.3:83082303-83082322 | None:intergenic | 45.0% | |
| TGGAAGATAAAGGGAGTGGA+GGG | - | chr3.3:83082574-83082593 | MS.gene37917:CDS | 45.0% | |
| TTCTGCATGGCTTCATCTGA+AGG | + | chr3.3:83085076-83085095 | None:intergenic | 45.0% | |
| ! | AAGCAACAAGTGGCCGATTT+AGG | - | chr3.3:83083107-83083126 | MS.gene37917:CDS | 45.0% |
| ! | AATCACTTGGTTTGAAGGGG+TGG | - | chr3.3:83082764-83082783 | MS.gene37917:CDS | 45.0% |
| ! | AATCCTTGGACAGGGTTTTG+TGG | - | chr3.3:83082976-83082995 | MS.gene37917:CDS | 45.0% |
| ! | AGAGGTTGCTTTGATGGAGT+TGG | - | chr3.3:83083468-83083487 | MS.gene37917:CDS | 45.0% |
| ! | AGATTCCGTTGCCCTTTTTC+GGG | + | chr3.3:83084435-83084454 | None:intergenic | 45.0% |
| ! | ATCTGAAGCAGCATTCCCTT+CGG | - | chr3.3:83084646-83084665 | MS.gene37917:CDS | 45.0% |
| ! | CAAGAGTATGCACAGAAAGC+AGG | - | chr3.3:83083304-83083323 | MS.gene37917:CDS | 45.0% |
| ! | CAATAATGGGGCAGAATCAC+TGG | - | chr3.3:83084586-83084605 | MS.gene37917:CDS | 45.0% |
| ! | CAGGCTTCTGAAAACCAGTT+TGG | - | chr3.3:83084389-83084408 | MS.gene37917:intron | 45.0% |
| ! | CATGCAGAATTCTGAGAACG+GGG | - | chr3.3:83084982-83085001 | MS.gene37917:intron | 45.0% |
| ! | CCATGCAGAATTCTGAGAAC+GGG | - | chr3.3:83084981-83085000 | MS.gene37917:intron | 45.0% |
| ! | CTGCTTCAGATTTGACTTCC+TGG | + | chr3.3:83085153-83085172 | None:intergenic | 45.0% |
| ! | GCCATGCAGAATTCTGAGAA+CGG | - | chr3.3:83084980-83084999 | MS.gene37917:intron | 45.0% |
| ! | GTGATGGAAGATAAAGGGAG+TGG | - | chr3.3:83082570-83082589 | MS.gene37917:CDS | 45.0% |
| !! | AATATTGGTGACGAGCTCAC+GGG | + | chr3.3:83083869-83083888 | None:intergenic | 45.0% |
| !! | CGGCGCTTCTTATTTCTATG+CGG | + | chr3.3:83084530-83084549 | None:intergenic | 45.0% |
| !!! | AGGGATTCCCTCACTTTTTG+TGG | - | chr3.3:83082620-83082639 | MS.gene37917:CDS | 45.0% |
| !!! | ATTCCCTCACTTTTTGTGGG+AGG | - | chr3.3:83082624-83082643 | MS.gene37917:CDS | 45.0% |
| !!! | CAAACTGGTTTTCAGAAGCC+TGG | + | chr3.3:83084391-83084410 | None:intergenic | 45.0% |
| !!! | GGGATTCCCTCACTTTTTGT+GGG | - | chr3.3:83082621-83082640 | MS.gene37917:CDS | 45.0% |
| !!! | TTCCCTCACTTTTTGTGGGA+GGG | - | chr3.3:83082625-83082644 | MS.gene37917:CDS | 45.0% |
| AACACTGACAATGCCGGTGA+TGG | - | chr3.3:83084554-83084573 | MS.gene37917:CDS | 50.0% | |
| AAGCCACAAAACCCTGTCCA+AGG | + | chr3.3:83082982-83083001 | None:intergenic | 50.0% | |
| AAGCCTGGGATGCATTTGTC+TGG | + | chr3.3:83084376-83084395 | None:intergenic | 50.0% | |
| ACCCCTCCCACAAAAAGTGA+GGG | + | chr3.3:83082630-83082649 | None:intergenic | 50.0% | |
| AGAGACATTAGCTGCAGTCC+AGG | - | chr3.3:83085447-83085466 | MS.gene37917:intron | 50.0% | |
| AGAGACATTAGCTGCCATCC+AGG | - | chr3.3:83085132-83085151 | MS.gene37917:intron | 50.0% | |
| AGAGACATTAGCTGGCATCC+AGG | - | chr3.3:83085549-83085568 | MS.gene37917:intron | 50.0% | |
| AGAGACGTTAGCTACCATCC+AGG | - | chr3.3:83085237-83085256 | MS.gene37917:intron | 50.0% | |
| ATAAAGGGAGTGGAGGGCTT+TGG | - | chr3.3:83082580-83082599 | MS.gene37917:CDS | 50.0% | |
| ATACATACTGGCGATGAGCG+TGG | - | chr3.3:83085777-83085796 | MS.gene37917:intron | 50.0% | |
| ATCGCCAGTATGTATCCCTC+GGG | + | chr3.3:83085772-83085791 | None:intergenic | 50.0% | |
| CATCGCCAGTATGTATCCCT+CGG | + | chr3.3:83085773-83085792 | None:intergenic | 50.0% | |
| CCCGTTCTCAGAATTCTGCA+TGG | + | chr3.3:83085194-83085213 | None:intergenic | 50.0% | |
| CGTGTACGGTTGACATTGGA+GGG | - | chr3.3:83084273-83084292 | MS.gene37917:intron | 50.0% | |
| GGAGGGATGCTCTATATTGG+AGG | - | chr3.3:83084290-83084309 | MS.gene37917:intron | 50.0% | |
| TATAATGGTGCCCTACCTGG+TGG | + | chr3.3:83084251-83084270 | None:intergenic | 50.0% | |
| TCCATCCCGAAAAAGGGCAA+CGG | - | chr3.3:83084427-83084446 | MS.gene37917:intron | 50.0% | |
| TCGTGTACGGTTGACATTGG+AGG | - | chr3.3:83084272-83084291 | MS.gene37917:intron | 50.0% | |
| TCTGCAACGGTCACTACACT+CGG | + | chr3.3:83083586-83083605 | None:intergenic | 50.0% | |
| TCTGCATGGCTTCATCTGGA+GGG | + | chr3.3:83084970-83084989 | None:intergenic | 50.0% | |
| TGCAACGATCTAGGAACCCT+AGG | - | chr3.3:83082520-83082539 | MS.gene37917:CDS | 50.0% | |
| TTCTGCATGGCTTCATCTGG+AGG | + | chr3.3:83084971-83084990 | None:intergenic | 50.0% | |
| ! | AGCTGCAGAGGTTGCTTTGA+TGG | - | chr3.3:83083462-83083481 | MS.gene37917:CDS | 50.0% |
| ! | CTCCAGATTTGACTTCCTGG+AGG | + | chr3.3:83084838-83084857 | None:intergenic | 50.0% |
| ! | CTGCTCCAGATTTGACTTCC+TGG | + | chr3.3:83084841-83084860 | None:intergenic | 50.0% |
| !! | AGAAGTGTCATTTGCTCCCG+AGG | - | chr3.3:83085753-83085772 | MS.gene37917:intron | 50.0% |
| !! | GAAGTGTCATTTGCTCCCGA+GGG | - | chr3.3:83085754-83085773 | MS.gene37917:intron | 50.0% |
| !!! | TCCCTCACTTTTTGTGGGAG+GGG | - | chr3.3:83082626-83082645 | MS.gene37917:CDS | 50.0% |
| AGGATGACACACCACCAGGT+AGG | - | chr3.3:83084237-83084256 | MS.gene37917:intron | 55.0% | |
| GACCCCTCCCACAAAAAGTG+AGG | + | chr3.3:83082631-83082650 | None:intergenic | 55.0% | |
| GGATGACACACCACCAGGTA+GGG | - | chr3.3:83084238-83084257 | MS.gene37917:intron | 55.0% | |
| GGCCTCCAGGAAGTCAAATC+TGG | - | chr3.3:83084833-83084852 | MS.gene37917:intron | 55.0% | |
| TGACGAGCTCACGGGTAAGA+AGG | + | chr3.3:83083861-83083880 | None:intergenic | 55.0% | |
| TGCTCCCGAGGGATACATAC+TGG | - | chr3.3:83085765-83085784 | MS.gene37917:intron | 55.0% | |
| ! | AGAGACATTAGCTGGCCTCC+AGG | - | chr3.3:83084718-83084737 | MS.gene37917:CDS | 55.0% |
| !!! | TCCGTTGCCCTTTTTCGGGA+TGG | + | chr3.3:83084431-83084450 | None:intergenic | 55.0% |
| AGCAGAGCAGTCAGCTGCAG+AGG | - | chr3.3:83083450-83083469 | MS.gene37917:CDS | 60.0% | |
| ! | AAGGGAGTGGAGGGCTTTGG+AGG | - | chr3.3:83082583-83082602 | MS.gene37917:CDS | 60.0% |
| !! | AGGGAGTGGAGGGCTTTGGA+GGG | - | chr3.3:83082584-83082603 | MS.gene37917:CDS | 60.0% |
| !! | GAGTGGAGGGCTTTGGAGGG+AGG | - | chr3.3:83082587-83082606 | MS.gene37917:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 83082234 | 83085846 | 83082234 | ID=MS.gene37917 |
| chr3.3 | mRNA | 83082234 | 83085846 | 83082234 | ID=MS.gene37917.t1;Parent=MS.gene37917 |
| chr3.3 | exon | 83085819 | 83085846 | 83085819 | ID=MS.gene37917.t1.exon1;Parent=MS.gene37917.t1 |
| chr3.3 | CDS | 83085819 | 83085846 | 83085819 | ID=cds.MS.gene37917.t1;Parent=MS.gene37917.t1 |
| chr3.3 | exon | 83084549 | 83084811 | 83084549 | ID=MS.gene37917.t1.exon2;Parent=MS.gene37917.t1 |
| chr3.3 | CDS | 83084549 | 83084811 | 83084549 | ID=cds.MS.gene37917.t1;Parent=MS.gene37917.t1 |
| chr3.3 | exon | 83082234 | 83083925 | 83082234 | ID=MS.gene37917.t1.exon3;Parent=MS.gene37917.t1 |
| chr3.3 | CDS | 83082234 | 83083925 | 83082234 | ID=cds.MS.gene37917.t1;Parent=MS.gene37917.t1 |
| Gene Sequence |
| Protein sequence |
