Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51664.t1 | XP_003598322.1 | 97.3 | 259 | 7 | 0 | 1 | 259 | 1 | 259 | 1.60E-139 | 505.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51664.t1 | Q9SN26 | 53.5 | 260 | 94 | 5 | 1 | 259 | 1 | 234 | 1.5e-61 | 237.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51664.t1 | G7IVD5 | 97.3 | 259 | 7 | 0 | 1 | 259 | 1 | 259 | 1.2e-139 | 505.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene51664 | 0.834304 | 3.24E-56 | -1.69E-46 |
| MS.gene049499 | MS.gene51664 | 0.825628 | 4.23E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene51664 | 0.824829 | 6.53E-54 | -1.69E-46 |
| MS.gene04998 | MS.gene51664 | 0.82464 | 7.23E-54 | -1.69E-46 |
| MS.gene050414 | MS.gene51664 | 0.814106 | 1.82E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene51664 | 0.832994 | 6.88E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene51664 | 0.820208 | 7.74E-53 | -1.69E-46 |
| MS.gene052016 | MS.gene51664 | 0.813103 | 3.03E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene51664 | 0.80429 | 2.32E-49 | -1.69E-46 |
| MS.gene052118 | MS.gene51664 | 0.809795 | 1.59E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene51664 | 0.80221 | 6.25E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene51664 | 0.808057 | 3.73E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene51664 | 0.835586 | 1.54E-56 | -1.69E-46 |
| MS.gene053726 | MS.gene51664 | 0.825609 | 4.27E-54 | -1.69E-46 |
| MS.gene053963 | MS.gene51664 | 0.818988 | 1.47E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene51664 | 0.85323 | 2.74E-61 | -1.69E-46 |
| MS.gene054893 | MS.gene51664 | 0.849034 | 4.19E-60 | -1.69E-46 |
| MS.gene055513 | MS.gene51664 | 0.811082 | 8.36E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene51664 | 0.812825 | 3.49E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene51664 | 0.820551 | 6.46E-53 | -1.69E-46 |
| MS.gene057155 | MS.gene51664 | 0.808329 | 3.27E-50 | -1.69E-46 |
| MS.gene057622 | MS.gene51664 | 0.816091 | 6.61E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene51664 | 0.82448 | 7.89E-54 | -1.69E-46 |
| MS.gene058159 | MS.gene51664 | 0.821311 | 4.32E-53 | -1.69E-46 |
| MS.gene058429 | MS.gene51664 | 0.812492 | 4.13E-51 | -1.69E-46 |
| MS.gene058592 | MS.gene51664 | 0.806953 | 6.40E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene51664 | 0.821812 | 3.31E-53 | -1.69E-46 |
| MS.gene05952 | MS.gene51664 | 0.811845 | 5.71E-51 | -1.69E-46 |
| MS.gene060259 | MS.gene51664 | 0.846925 | 1.60E-59 | -1.69E-46 |
| MS.gene060412 | MS.gene51664 | 0.811913 | 5.52E-51 | -1.69E-46 |
| MS.gene060413 | MS.gene51664 | 0.810036 | 1.41E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene51664 | 0.805655 | 1.20E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene51664 | 0.808244 | 3.41E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene51664 | 0.818028 | 2.43E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene51664 | 0.833833 | 4.25E-56 | -1.69E-46 |
| MS.gene061205 | MS.gene51664 | 0.801033 | 1.09E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51664.t1 | MTR_3g010290 | 97.297 | 259 | 7 | 0 | 1 | 259 | 1 | 259 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51664.t1 | AT4G10170 | 53.462 | 260 | 94 | 5 | 1 | 259 | 1 | 234 | 2.53e-82 | 248 |
| MS.gene51664.t1 | AT4G10170 | 53.462 | 260 | 94 | 5 | 1 | 259 | 1 | 234 | 2.53e-82 | 248 |
| MS.gene51664.t1 | AT1G33475 | 43.561 | 264 | 117 | 8 | 1 | 260 | 1 | 236 | 1.18e-61 | 195 |
| MS.gene51664.t1 | AT1G33475 | 57.143 | 56 | 22 | 1 | 1 | 54 | 1 | 56 | 1.44e-16 | 75.1 |
| MS.gene51664.t1 | AT1G33475 | 42.857 | 91 | 40 | 3 | 171 | 260 | 55 | 134 | 9.59e-15 | 70.1 |
Find 58 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTTTGCAAAAGGATA+TGG | 0.148205 | 3.4:-5226167 | MS.gene51664:CDS |
| AAGGCCTGATTCAGGAAATT+TGG | 0.252155 | 3.4:-5226221 | MS.gene51664:CDS |
| TTCAACCAAAGCCCCTTTAT+TGG | 0.253713 | 3.4:-5226344 | MS.gene51664:CDS |
| TTTCACATAGTGGTAGTAAT+TGG | 0.275380 | 3.4:-5226447 | MS.gene51664:CDS |
| AATGAGAGATGTTGAGTTAG+AGG | 0.307965 | 3.4:-5226272 | MS.gene51664:CDS |
| TCAACCAAAGCCCCTTTATT+GGG | 0.328565 | 3.4:-5226343 | MS.gene51664:CDS |
| GACGAAACTTCCTCGACATT+TGG | 0.372647 | 3.4:-5226421 | MS.gene51664:CDS |
| TCGTCCAAATTTCCTGAATC+AGG | 0.373685 | 3.4:+5226217 | None:intergenic |
| ATTTCGAGACAATAGGTAAA+AGG | 0.375196 | 3.4:-5226690 | MS.gene51664:CDS |
| AGTTTACGTTCAAGAGAAAC+TGG | 0.388560 | 3.4:-5226509 | MS.gene51664:CDS |
| AGAGGATCAAGGCCTGATTC+AGG | 0.392539 | 3.4:-5226229 | MS.gene51664:CDS |
| ACGTAAACTGAATTCATGTT+TGG | 0.402139 | 3.4:+5226523 | None:intergenic |
| ATTTGTCCATTCAAATTACT+TGG | 0.402162 | 3.4:+5226379 | None:intergenic |
| TACATCTTCTTCTTTGCAAA+AGG | 0.409637 | 3.4:-5226173 | MS.gene51664:CDS |
| AGATGAAGGTCTTGGTAACT+TGG | 0.412330 | 3.4:-5226620 | MS.gene51664:CDS |
| TCTTCTTTGCAAAAGGATAT+GGG | 0.415200 | 3.4:-5226166 | MS.gene51664:CDS |
| TAGCTAGAACAATGCGTACT+TGG | 0.417134 | 3.4:+5226092 | None:intergenic |
| CTCAAAACGTCCGTAAGAAA+TGG | 0.447780 | 3.4:-5226120 | MS.gene51664:CDS |
| TACTTCACAATTGTAGATGA+AGG | 0.455781 | 3.4:-5226634 | MS.gene51664:CDS |
| CATTACTGTTGTGTTTCTAA+AGG | 0.456727 | 3.4:-5226808 | MS.gene51664:CDS |
| CCATTCAAATTACTTGGTGA+TGG | 0.462379 | 3.4:+5226385 | None:intergenic |
| CACAGCCTTGTGCTTGGAGG+CGG | 0.462743 | 3.4:-5226734 | MS.gene51664:CDS |
| ACAATTGTAGATGAAGGTCT+TGG | 0.466801 | 3.4:-5226628 | MS.gene51664:CDS |
| ACAATAGGTAAAAGGACTTA+CGG | 0.467377 | 3.4:-5226682 | MS.gene51664:CDS |
| CTTGGCGCCACCATTTCTTA+CGG | 0.469508 | 3.4:+5226110 | None:intergenic |
| CAATAGGTAAAAGGACTTAC+GGG | 0.479243 | 3.4:-5226681 | MS.gene51664:CDS |
| TTAGAGAATGTTTCACATAG+TGG | 0.480167 | 3.4:-5226457 | MS.gene51664:CDS |
| AGGCGGTTCCTTCTTTCCAC+AGG | 0.481926 | 3.4:-5226717 | MS.gene51664:CDS |
| CACATCCTGTATGCGTATAG+TGG | 0.484986 | 3.4:-5226781 | MS.gene51664:CDS |
| AAATTACTTGGTGATGGAGA+TGG | 0.492575 | 3.4:+5226391 | None:intergenic |
| TTCAGAAAGGTAGCTAGAAA+AGG | 0.498079 | 3.4:-5226562 | MS.gene51664:CDS |
| AGGTGGTATTTCGAGACAAT+AGG | 0.503747 | 3.4:-5226697 | MS.gene51664:CDS |
| GGTTCAATGAGGACGAGATC+AGG | 0.506463 | 3.4:-5226145 | MS.gene51664:CDS |
| CTCCACCACTATACGCATAC+AGG | 0.508766 | 3.4:+5226776 | None:intergenic |
| AGGTAGCTAGAAAAGGTTCA+AGG | 0.518283 | 3.4:-5226555 | MS.gene51664:CDS |
| CGGTTCCTTCTTTCCACAGG+TGG | 0.523709 | 3.4:-5226714 | MS.gene51664:CDS |
| CCATCACCAAGTAATTTGAA+TGG | 0.529421 | 3.4:-5226385 | MS.gene51664:CDS |
| AAATACCACCTGTGGAAAGA+AGG | 0.529530 | 3.4:+5226709 | None:intergenic |
| GTGATCAGATTACGAATGAC+AGG | 0.539134 | 3.4:+5226484 | None:intergenic |
| ACTTCCTCGACATTTGGCAT+TGG | 0.540398 | 3.4:-5226415 | MS.gene51664:CDS |
| GCAAGAGAAGAAGAAAGTAA+AGG | 0.545957 | 3.4:-5226308 | MS.gene51664:CDS |
| CACTATACGCATACAGGATG+TGG | 0.545979 | 3.4:+5226782 | None:intergenic |
| TGTCACAGCCTTGTGCTTGG+AGG | 0.553859 | 3.4:-5226737 | MS.gene51664:CDS |
| GAATGTCACAGCCTTGTGCT+TGG | 0.555477 | 3.4:-5226740 | MS.gene51664:CDS |
| AATCTACAGATAGAGGATCA+AGG | 0.570567 | 3.4:-5226240 | MS.gene51664:CDS |
| GGTAGCTAGAAAAGGTTCAA+GGG | 0.580926 | 3.4:-5226554 | MS.gene51664:CDS |
| AAAACGTCCGTAAGAAATGG+TGG | 0.598377 | 3.4:-5226117 | MS.gene51664:CDS |
| TTGTCTCGAAATACCACCTG+TGG | 0.605879 | 3.4:+5226701 | None:intergenic |
| AGGAACCGCCTCCAAGCACA+AGG | 0.610638 | 3.4:+5226729 | None:intergenic |
| GTAGCTAGAAAAGGTTCAAG+GGG | 0.613162 | 3.4:-5226553 | MS.gene51664:CDS |
| AAGATGTAGCAGCACCACCT+TGG | 0.620183 | 3.4:+5226188 | None:intergenic |
| TGTCAGAGATGAATTCAGAA+AGG | 0.624051 | 3.4:-5226575 | MS.gene51664:CDS |
| ATCCTGTATGCGTATAGTGG+TGG | 0.628603 | 3.4:-5226778 | MS.gene51664:CDS |
| GTAAATGATCAGATCAGGCA+CGG | 0.633105 | 3.4:+5225935 | None:intergenic |
| AATTTGGACGATATTAGCCA+AGG | 0.644044 | 3.4:-5226205 | MS.gene51664:CDS |
| TGGACCAATGCCAAATGTCG+AGG | 0.656618 | 3.4:+5226411 | None:intergenic |
| TTGGACGATATTAGCCAAGG+TGG | 0.671852 | 3.4:-5226202 | MS.gene51664:CDS |
| AAAAGGATATGGGTTCAATG+AGG | 0.721400 | 3.4:-5226156 | MS.gene51664:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATAATATTATTTGTCATC+TGG | - | chr3.4:5226726-5226745 | MS.gene51664:CDS | 20.0% |
| ! | AATACGATAACGATCAAATT+CGG | + | chr3.4:5226810-5226829 | None:intergenic | 25.0% |
| ! | ATTTGTCCATTCAAATTACT+TGG | + | chr3.4:5226404-5226423 | None:intergenic | 25.0% |
| ! | CATAAAAAATCTACAGATAG+AGG | - | chr3.4:5226533-5226552 | MS.gene51664:CDS | 25.0% |
| !! | TACTAGATTTTCCCAATAAA+GGG | + | chr3.4:5226451-5226470 | None:intergenic | 25.0% |
| !! | TTACTAGATTTTCCCAATAA+AGG | + | chr3.4:5226452-5226471 | None:intergenic | 25.0% |
| ACAATAGGTAAAAGGACTTA+CGG | - | chr3.4:5226098-5226117 | MS.gene51664:CDS | 30.0% | |
| ACGTAAACTGAATTCATGTT+TGG | + | chr3.4:5226260-5226279 | None:intergenic | 30.0% | |
| ATTTCGAGACAATAGGTAAA+AGG | - | chr3.4:5226090-5226109 | MS.gene51664:CDS | 30.0% | |
| GAATTTGATCGTTATCGTAT+TGG | - | chr3.4:5226809-5226828 | MS.gene51664:CDS | 30.0% | |
| TACATCTTCTTCTTTGCAAA+AGG | - | chr3.4:5226607-5226626 | MS.gene51664:CDS | 30.0% | |
| TACTTCACAATTGTAGATGA+AGG | - | chr3.4:5226146-5226165 | MS.gene51664:CDS | 30.0% | |
| TCTTCTTTGCAAAAGGATAT+GGG | - | chr3.4:5226614-5226633 | MS.gene51664:CDS | 30.0% | |
| TTAGAGAATGTTTCACATAG+TGG | - | chr3.4:5226323-5226342 | MS.gene51664:CDS | 30.0% | |
| TTCTTCTTTGCAAAAGGATA+TGG | - | chr3.4:5226613-5226632 | MS.gene51664:CDS | 30.0% | |
| TTTCACATAGTGGTAGTAAT+TGG | - | chr3.4:5226333-5226352 | MS.gene51664:CDS | 30.0% | |
| ! | ACTAGATTTTCCCAATAAAG+GGG | + | chr3.4:5226450-5226469 | None:intergenic | 30.0% |
| ! | CATTACTGTTGTGTTTCTAA+AGG | - | chr3.4:5225972-5225991 | MS.gene51664:intron | 30.0% |
| AAAAGGATATGGGTTCAATG+AGG | - | chr3.4:5226624-5226643 | MS.gene51664:CDS | 35.0% | |
| AATCTACAGATAGAGGATCA+AGG | - | chr3.4:5226540-5226559 | MS.gene51664:CDS | 35.0% | |
| AATGAGAGATGTTGAGTTAG+AGG | - | chr3.4:5226508-5226527 | MS.gene51664:CDS | 35.0% | |
| AATTTGGACGATATTAGCCA+AGG | - | chr3.4:5226575-5226594 | MS.gene51664:CDS | 35.0% | |
| ACAATTGTAGATGAAGGTCT+TGG | - | chr3.4:5226152-5226171 | MS.gene51664:CDS | 35.0% | |
| AGTTTACGTTCAAGAGAAAC+TGG | - | chr3.4:5226271-5226290 | MS.gene51664:CDS | 35.0% | |
| ATCGAATGCATGATATACCA+CGG | + | chr3.4:5226763-5226782 | None:intergenic | 35.0% | |
| CAATAGGTAAAAGGACTTAC+GGG | - | chr3.4:5226099-5226118 | MS.gene51664:CDS | 35.0% | |
| CCATCACCAAGTAATTTGAA+TGG | - | chr3.4:5226395-5226414 | MS.gene51664:CDS | 35.0% | |
| GCAAGAGAAGAAGAAAGTAA+AGG | - | chr3.4:5226472-5226491 | MS.gene51664:CDS | 35.0% | |
| TGTCAGAGATGAATTCAGAA+AGG | - | chr3.4:5226205-5226224 | MS.gene51664:CDS | 35.0% | |
| TTCAGAAAGGTAGCTAGAAA+AGG | - | chr3.4:5226218-5226237 | MS.gene51664:CDS | 35.0% | |
| ! | ATTTCTTACGGACGTTTTGA+GGG | + | chr3.4:5226661-5226680 | None:intergenic | 35.0% |
| ! | CCATTCAAATTACTTGGTGA+TGG | + | chr3.4:5226398-5226417 | None:intergenic | 35.0% |
| !! | AAATTACTTGGTGATGGAGA+TGG | + | chr3.4:5226392-5226411 | None:intergenic | 35.0% |
| !! | CTTGGTAGTTCTTCAGTTTT+TGG | - | chr3.4:5226178-5226197 | MS.gene51664:CDS | 35.0% |
| AAAACGTCCGTAAGAAATGG+TGG | - | chr3.4:5226663-5226682 | MS.gene51664:CDS | 40.0% | |
| AAATACCACCTGTGGAAAGA+AGG | + | chr3.4:5226074-5226093 | None:intergenic | 40.0% | |
| AAGGCCTGATTCAGGAAATT+TGG | - | chr3.4:5226559-5226578 | MS.gene51664:CDS | 40.0% | |
| AGGTAGCTAGAAAAGGTTCA+AGG | - | chr3.4:5226225-5226244 | MS.gene51664:CDS | 40.0% | |
| AGGTGGTATTTCGAGACAAT+AGG | - | chr3.4:5226083-5226102 | MS.gene51664:CDS | 40.0% | |
| ATCTGGTTAGTAATATGCCG+TGG | - | chr3.4:5226743-5226762 | MS.gene51664:CDS | 40.0% | |
| CTCAAAACGTCCGTAAGAAA+TGG | - | chr3.4:5226660-5226679 | MS.gene51664:CDS | 40.0% | |
| GGTAGCTAGAAAAGGTTCAA+GGG | - | chr3.4:5226226-5226245 | MS.gene51664:CDS | 40.0% | |
| GTAGCTAGAAAAGGTTCAAG+GGG | - | chr3.4:5226227-5226246 | MS.gene51664:CDS | 40.0% | |
| GTGATCAGATTACGAATGAC+AGG | + | chr3.4:5226299-5226318 | None:intergenic | 40.0% | |
| TAGCTAGAACAATGCGTACT+TGG | + | chr3.4:5226691-5226710 | None:intergenic | 40.0% | |
| TCAACCAAAGCCCCTTTATT+GGG | - | chr3.4:5226437-5226456 | MS.gene51664:CDS | 40.0% | |
| TCGTCCAAATTTCCTGAATC+AGG | + | chr3.4:5226566-5226585 | None:intergenic | 40.0% | |
| TTCAACCAAAGCCCCTTTAT+TGG | - | chr3.4:5226436-5226455 | MS.gene51664:CDS | 40.0% | |
| ! | AGATGAAGGTCTTGGTAACT+TGG | - | chr3.4:5226160-5226179 | MS.gene51664:CDS | 40.0% |
| ! | CATTTCTTACGGACGTTTTG+AGG | + | chr3.4:5226662-5226681 | None:intergenic | 40.0% |
| ! | TTTTCCCAATAAAGGGGCTT+TGG | + | chr3.4:5226444-5226463 | None:intergenic | 40.0% |
| !! | AAGGACTTACGGGTTTTTAG+TGG | - | chr3.4:5226109-5226128 | MS.gene51664:CDS | 40.0% |
| !!! | TACGGGTTTTTAGTGGAAGA+TGG | - | chr3.4:5226116-5226135 | MS.gene51664:CDS | 40.0% |
| ACTTCCTCGACATTTGGCAT+TGG | - | chr3.4:5226365-5226384 | MS.gene51664:CDS | 45.0% | |
| ATCCTGTATGCGTATAGTGG+TGG | - | chr3.4:5226002-5226021 | MS.gene51664:intron | 45.0% | |
| CACATCCTGTATGCGTATAG+TGG | - | chr3.4:5225999-5226018 | MS.gene51664:intron | 45.0% | |
| CACTATACGCATACAGGATG+TGG | + | chr3.4:5226001-5226020 | None:intergenic | 45.0% | |
| GACGAAACTTCCTCGACATT+TGG | - | chr3.4:5226359-5226378 | MS.gene51664:CDS | 45.0% | |
| TTGGACGATATTAGCCAAGG+TGG | - | chr3.4:5226578-5226597 | MS.gene51664:CDS | 45.0% | |
| TTGTCTCGAAATACCACCTG+TGG | + | chr3.4:5226082-5226101 | None:intergenic | 45.0% | |
| AAGATGTAGCAGCACCACCT+TGG | + | chr3.4:5226595-5226614 | None:intergenic | 50.0% | |
| AGAGGATCAAGGCCTGATTC+AGG | - | chr3.4:5226551-5226570 | MS.gene51664:CDS | 50.0% | |
| CTCCACCACTATACGCATAC+AGG | + | chr3.4:5226007-5226026 | None:intergenic | 50.0% | |
| CTTGGCGCCACCATTTCTTA+CGG | + | chr3.4:5226673-5226692 | None:intergenic | 50.0% | |
| GGTTCAATGAGGACGAGATC+AGG | - | chr3.4:5226635-5226654 | MS.gene51664:CDS | 50.0% | |
| TGGACCAATGCCAAATGTCG+AGG | + | chr3.4:5226372-5226391 | None:intergenic | 50.0% | |
| ! | GAATGTCACAGCCTTGTGCT+TGG | - | chr3.4:5226040-5226059 | MS.gene51664:intron | 50.0% |
| AGGCGGTTCCTTCTTTCCAC+AGG | - | chr3.4:5226063-5226082 | MS.gene51664:intron | 55.0% | |
| CGGTTCCTTCTTTCCACAGG+TGG | - | chr3.4:5226066-5226085 | MS.gene51664:intron | 55.0% | |
| ! | TGTCACAGCCTTGTGCTTGG+AGG | - | chr3.4:5226043-5226062 | MS.gene51664:intron | 55.0% |
| AGGAACCGCCTCCAAGCACA+AGG | + | chr3.4:5226054-5226073 | None:intergenic | 60.0% | |
| ! | CACAGCCTTGTGCTTGGAGG+CGG | - | chr3.4:5226046-5226065 | MS.gene51664:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 5225948 | 5226854 | 5225948 | ID=MS.gene51664 |
| chr3.4 | mRNA | 5225948 | 5226854 | 5225948 | ID=MS.gene51664.t1;Parent=MS.gene51664 |
| chr3.4 | exon | 5226081 | 5226854 | 5226081 | ID=MS.gene51664.t1.exon1;Parent=MS.gene51664.t1 |
| chr3.4 | CDS | 5226081 | 5226854 | 5226081 | ID=cds.MS.gene51664.t1;Parent=MS.gene51664.t1 |
| chr3.4 | exon | 5225948 | 5225962 | 5225948 | ID=MS.gene51664.t1.exon2;Parent=MS.gene51664.t1 |
| chr3.4 | CDS | 5225948 | 5225962 | 5225948 | ID=cds.MS.gene51664.t1;Parent=MS.gene51664.t1 |
| Gene Sequence |
| Protein sequence |
