Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75564.t1 | XP_003601840.1 | 98.3 | 521 | 9 | 0 | 1 | 521 | 1 | 521 | 7.90E-279 | 969.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75564.t1 | Q9LU89 | 80.9 | 423 | 81 | 0 | 82 | 504 | 88 | 510 | 5.1e-202 | 705.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75564.t1 | G7J2I4 | 98.3 | 521 | 9 | 0 | 1 | 521 | 1 | 521 | 5.7e-279 | 969.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene75564 | 0.823312 | 1.48E-53 | -1.69E-46 |
| MS.gene049166 | MS.gene75564 | 0.82201 | 2.98E-53 | -1.69E-46 |
| MS.gene04917 | MS.gene75564 | 0.826513 | 2.60E-54 | -1.69E-46 |
| MS.gene049283 | MS.gene75564 | 0.843708 | 1.19E-58 | -1.69E-46 |
| MS.gene049368 | MS.gene75564 | 0.807925 | 3.98E-50 | -1.69E-46 |
| MS.gene049786 | MS.gene75564 | 0.822428 | 2.38E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene75564 | 0.853747 | 1.95E-61 | -1.69E-46 |
| MS.gene04998 | MS.gene75564 | 0.843993 | 9.96E-59 | -1.69E-46 |
| MS.gene050114 | MS.gene75564 | 0.838671 | 2.50E-57 | -1.69E-46 |
| MS.gene050359 | MS.gene75564 | 0.823223 | 1.56E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene75564 | 0.813478 | 2.51E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene75564 | 0.880774 | 4.16E-70 | -1.69E-46 |
| MS.gene050737 | MS.gene75564 | 0.836815 | 7.50E-57 | -1.69E-46 |
| MS.gene050759 | MS.gene75564 | 0.815718 | 8.01E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene75564 | 0.851669 | 7.64E-61 | -1.69E-46 |
| MS.gene051003 | MS.gene75564 | 0.801966 | 7.02E-49 | -1.69E-46 |
| MS.gene051184 | MS.gene75564 | 0.856628 | 2.83E-62 | -1.69E-46 |
| MS.gene051541 | MS.gene75564 | 0.871198 | 8.20E-67 | -1.69E-46 |
| MS.gene051819 | MS.gene75564 | 0.80719 | 5.71E-50 | -1.69E-46 |
| MS.gene051831 | MS.gene75564 | 0.807917 | 4.00E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene75564 | 0.816175 | 6.33E-52 | -1.69E-46 |
| MS.gene052016 | MS.gene75564 | 0.817561 | 3.09E-52 | -1.69E-46 |
| MS.gene052052 | MS.gene75564 | 0.823374 | 1.43E-53 | -1.69E-46 |
| MS.gene052118 | MS.gene75564 | 0.827764 | 1.31E-54 | -1.69E-46 |
| MS.gene052307 | MS.gene75564 | 0.811105 | 8.27E-51 | -1.69E-46 |
| MS.gene052342 | MS.gene75564 | 0.830547 | 2.76E-55 | -1.69E-46 |
| MS.gene052434 | MS.gene75564 | 0.822881 | 1.87E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene75564 | 0.815072 | 1.11E-51 | -1.69E-46 |
| MS.gene052493 | MS.gene75564 | 0.809387 | 1.94E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene75564 | 0.800998 | 1.11E-48 | -1.69E-46 |
| MS.gene053298 | MS.gene75564 | 0.813878 | 2.05E-51 | -1.69E-46 |
| MS.gene053456 | MS.gene75564 | 0.811096 | 8.31E-51 | -1.69E-46 |
| MS.gene053726 | MS.gene75564 | 0.859812 | 3.19E-63 | -1.69E-46 |
| MS.gene053895 | MS.gene75564 | -0.805758 | 1.14E-49 | -1.69E-46 |
| MS.gene053963 | MS.gene75564 | 0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene75564 | 0.822202 | 2.69E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene75564 | 0.871709 | 5.56E-67 | -1.69E-46 |
| MS.gene054893 | MS.gene75564 | 0.875224 | 3.65E-68 | -1.69E-46 |
| MS.gene055222 | MS.gene75564 | 0.83009 | 3.57E-55 | -1.69E-46 |
| MS.gene055327 | MS.gene75564 | 0.830402 | 3.00E-55 | -1.69E-46 |
| MS.gene055442 | MS.gene75564 | 0.822708 | 2.05E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene75564 | 0.837386 | 5.36E-57 | -1.69E-46 |
| MS.gene055864 | MS.gene75564 | 0.849602 | 2.91E-60 | -1.69E-46 |
| MS.gene056097 | MS.gene75564 | 0.811537 | 6.66E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene75564 | 0.834356 | 3.14E-56 | -1.69E-46 |
| MS.gene056699 | MS.gene75564 | 0.802833 | 4.65E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene75564 | 0.80159 | 8.38E-49 | -1.69E-46 |
| MS.gene056831 | MS.gene75564 | 0.826133 | 3.21E-54 | -1.69E-46 |
| MS.gene057155 | MS.gene75564 | 0.828602 | 8.21E-55 | -1.69E-46 |
| MS.gene057622 | MS.gene75564 | 0.812629 | 3.85E-51 | -1.69E-46 |
| MS.gene058081 | MS.gene75564 | 0.804318 | 2.29E-49 | -1.69E-46 |
| MS.gene058095 | MS.gene75564 | 0.802575 | 5.26E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene75564 | 0.805398 | 1.36E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene75564 | 0.87712 | 8.11E-69 | -1.69E-46 |
| MS.gene058592 | MS.gene75564 | 0.81841 | 1.99E-52 | -1.69E-46 |
| MS.gene058758 | MS.gene75564 | 0.823798 | 1.14E-53 | -1.69E-46 |
| MS.gene059170 | MS.gene75564 | 0.844451 | 7.50E-59 | -1.69E-46 |
| MS.gene059283 | MS.gene75564 | 0.803932 | 2.75E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene75564 | 0.80272 | 4.91E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene75564 | 0.80095 | 1.13E-48 | -1.69E-46 |
| MS.gene06010 | MS.gene75564 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene75564 | 0.809391 | 1.94E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene75564 | 0.833032 | 6.73E-56 | -1.69E-46 |
| MS.gene060412 | MS.gene75564 | 0.815972 | 7.03E-52 | -1.69E-46 |
| MS.gene060435 | MS.gene75564 | 0.838364 | 3.01E-57 | -1.69E-46 |
| MS.gene060520 | MS.gene75564 | 0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene75564 | 0.826793 | 2.23E-54 | -1.69E-46 |
| MS.gene060850 | MS.gene75564 | 0.800258 | 1.57E-48 | -1.69E-46 |
| MS.gene060851 | MS.gene75564 | 0.812252 | 4.66E-51 | -1.69E-46 |
| MS.gene060852 | MS.gene75564 | 0.811361 | 7.27E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene75564 | 0.876674 | 1.16E-68 | -1.69E-46 |
| MS.gene060933 | MS.gene75564 | 0.823104 | 1.66E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene75564 | 0.804925 | 1.71E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene75564 | 0.826073 | 3.31E-54 | -1.69E-46 |
| MS.gene061100 | MS.gene75564 | 0.807726 | 4.39E-50 | -1.69E-46 |
| MS.gene061205 | MS.gene75564 | 0.803839 | 2.88E-49 | -1.69E-46 |
| MS.gene06121 | MS.gene75564 | 0.827731 | 1.33E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045221 | MS.gene75564 | PPI |
| MS.gene007383 | MS.gene75564 | PPI |
| MS.gene029756 | MS.gene75564 | PPI |
| MS.gene035014 | MS.gene75564 | PPI |
| MS.gene70740 | MS.gene75564 | PPI |
| MS.gene25819 | MS.gene75564 | PPI |
| MS.gene75564 | MS.gene020631 | PPI |
| MS.gene067043 | MS.gene75564 | PPI |
| MS.gene051425 | MS.gene75564 | PPI |
| MS.gene47441 | MS.gene75564 | PPI |
| MS.gene021631 | MS.gene75564 | PPI |
| MS.gene014785 | MS.gene75564 | PPI |
| MS.gene015941 | MS.gene75564 | PPI |
| MS.gene020631 | MS.gene75564 | PPI |
| MS.gene044183 | MS.gene75564 | PPI |
| MS.gene71483 | MS.gene75564 | PPI |
| MS.gene22385 | MS.gene75564 | PPI |
| MS.gene072957 | MS.gene75564 | PPI |
| MS.gene79120 | MS.gene75564 | PPI |
| MS.gene007562 | MS.gene75564 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75564.t1 | MTR_3g086010 | 99.424 | 521 | 3 | 0 | 1 | 521 | 1 | 521 | 0.0 | 1072 |
| MS.gene75564.t1 | MTR_6g022720 | 68.138 | 521 | 155 | 4 | 1 | 520 | 1 | 511 | 0.0 | 727 |
| MS.gene75564.t1 | MTR_3g080070 | 64.015 | 528 | 171 | 5 | 1 | 513 | 1 | 524 | 0.0 | 658 |
| MS.gene75564.t1 | MTR_6g022720 | 70.297 | 404 | 112 | 3 | 1 | 403 | 1 | 397 | 0.0 | 582 |
| MS.gene75564.t1 | MTR_1g062950 | 60.345 | 464 | 174 | 4 | 48 | 506 | 24 | 482 | 0.0 | 569 |
| MS.gene75564.t1 | MTR_1g111570 | 54.845 | 485 | 206 | 3 | 40 | 512 | 5 | 488 | 0.0 | 560 |
| MS.gene75564.t1 | MTR_1g011460 | 52.918 | 514 | 216 | 4 | 1 | 512 | 1 | 490 | 0.0 | 546 |
| MS.gene75564.t1 | MTR_3g107980 | 52.529 | 514 | 225 | 4 | 1 | 512 | 1 | 497 | 0.0 | 540 |
| MS.gene75564.t1 | MTR_4g113020 | 50.794 | 504 | 224 | 4 | 1 | 500 | 1 | 484 | 0.0 | 518 |
| MS.gene75564.t1 | MTR_7g102900 | 67.173 | 329 | 108 | 0 | 83 | 411 | 42 | 370 | 1.03e-160 | 461 |
| MS.gene75564.t1 | MTR_4g113020 | 50.611 | 409 | 178 | 4 | 1 | 405 | 1 | 389 | 7.36e-142 | 414 |
| MS.gene75564.t1 | MTR_1g112940 | 41.337 | 404 | 235 | 1 | 103 | 506 | 39 | 440 | 3.29e-117 | 353 |
| MS.gene75564.t1 | MTR_7g102920 | 55.340 | 103 | 46 | 0 | 403 | 505 | 22 | 124 | 2.12e-33 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75564.t1 | AT3G26020 | 72.157 | 510 | 136 | 3 | 1 | 504 | 1 | 510 | 0.0 | 734 |
| MS.gene75564.t1 | AT3G26020 | 72.157 | 510 | 136 | 3 | 1 | 504 | 1 | 510 | 0.0 | 734 |
| MS.gene75564.t1 | AT3G26020 | 72.157 | 510 | 136 | 3 | 1 | 504 | 1 | 510 | 0.0 | 734 |
| MS.gene75564.t1 | AT3G26020 | 72.157 | 510 | 136 | 3 | 1 | 504 | 1 | 510 | 0.0 | 734 |
| MS.gene75564.t1 | AT1G13460 | 74.514 | 463 | 115 | 1 | 44 | 506 | 32 | 491 | 0.0 | 723 |
| MS.gene75564.t1 | AT1G13460 | 74.514 | 463 | 115 | 1 | 44 | 506 | 32 | 491 | 0.0 | 723 |
| MS.gene75564.t1 | AT4G15415 | 65.497 | 513 | 171 | 4 | 1 | 513 | 1 | 507 | 0.0 | 685 |
| MS.gene75564.t1 | AT4G15415 | 65.497 | 513 | 171 | 4 | 1 | 513 | 1 | 507 | 0.0 | 685 |
| MS.gene75564.t1 | AT4G15415 | 65.497 | 513 | 171 | 4 | 1 | 513 | 1 | 507 | 0.0 | 685 |
| MS.gene75564.t1 | AT4G15415 | 65.497 | 513 | 171 | 4 | 1 | 513 | 1 | 507 | 0.0 | 685 |
| MS.gene75564.t1 | AT3G21650 | 62.147 | 531 | 181 | 4 | 1 | 513 | 1 | 529 | 0.0 | 661 |
| MS.gene75564.t1 | AT3G21650 | 62.147 | 531 | 181 | 4 | 1 | 513 | 1 | 529 | 0.0 | 661 |
| MS.gene75564.t1 | AT3G26020 | 61.290 | 558 | 133 | 5 | 1 | 504 | 1 | 529 | 0.0 | 638 |
| MS.gene75564.t1 | AT3G26020 | 62.107 | 541 | 139 | 7 | 1 | 504 | 1 | 512 | 0.0 | 620 |
| MS.gene75564.t1 | AT3G26020 | 62.107 | 541 | 139 | 7 | 1 | 504 | 1 | 512 | 0.0 | 620 |
| MS.gene75564.t1 | AT3G26020 | 62.107 | 541 | 139 | 7 | 1 | 504 | 1 | 512 | 0.0 | 620 |
| MS.gene75564.t1 | AT3G26030 | 56.832 | 505 | 187 | 5 | 1 | 503 | 1 | 476 | 0.0 | 590 |
| MS.gene75564.t1 | AT3G09880 | 56.920 | 513 | 191 | 4 | 1 | 506 | 1 | 490 | 0.0 | 582 |
| MS.gene75564.t1 | AT5G03470 | 56.461 | 503 | 201 | 4 | 1 | 502 | 1 | 486 | 0.0 | 564 |
| MS.gene75564.t1 | AT5G25510 | 51.631 | 521 | 227 | 5 | 1 | 520 | 1 | 497 | 0.0 | 531 |
| MS.gene75564.t1 | AT4G15415 | 64.851 | 404 | 136 | 4 | 1 | 404 | 1 | 398 | 0.0 | 528 |
| MS.gene75564.t1 | AT3G54930 | 55.794 | 466 | 194 | 2 | 40 | 503 | 41 | 496 | 0.0 | 521 |
| MS.gene75564.t1 | AT3G54930 | 55.794 | 466 | 194 | 2 | 40 | 503 | 41 | 496 | 0.0 | 521 |
| MS.gene75564.t1 | AT3G54930 | 55.041 | 367 | 153 | 2 | 40 | 404 | 41 | 397 | 5.94e-136 | 399 |
Find 88 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATTTAATACCTGAAAA+TGG | 0.154967 | 3.2:-73816240 | None:intergenic |
| AGAAGAGCATAAATTGTTTC+TGG | 0.170362 | 3.2:+73815946 | MS.gene75564:CDS |
| ATGAAGCTTTACCAGCATTT+AGG | 0.170397 | 3.2:+73815294 | MS.gene75564:CDS |
| TGAAGCTTTACCAGCATTTA+GGG | 0.264284 | 3.2:+73815295 | MS.gene75564:CDS |
| TCCTTTGAACTATTTGTTAT+CGG | 0.271122 | 3.2:-73816106 | None:intergenic |
| TTGATGAACTATGTTCAAAA+AGG | 0.297427 | 3.2:+73815031 | None:intergenic |
| ATGTCTTTGCATCGGATCTA+TGG | 0.305697 | 3.2:+73815776 | MS.gene75564:CDS |
| TCGGATCTATGGCAAGTTAA+TGG | 0.326598 | 3.2:+73815787 | MS.gene75564:CDS |
| GAACATTTAAAGTCAAACTA+TGG | 0.333782 | 3.2:-73819517 | None:intergenic |
| ATTCTGGGGAGTATCATTAA+TGG | 0.341716 | 3.2:+73815905 | MS.gene75564:CDS |
| CATTGATGGCGTTGAATTAG+AGG | 0.343144 | 3.2:+73815568 | MS.gene75564:CDS |
| AAAATTTAATACCTGAAAAT+GGG | 0.353230 | 3.2:-73816239 | None:intergenic |
| CCATTGGAATTCTCATTCAT+AGG | 0.353655 | 3.2:-73815257 | None:intergenic |
| ACCATACATCGCTGGAATTC+TGG | 0.359106 | 3.2:-73816178 | None:intergenic |
| CTCTCTTTCTCTAGGATCTT+CGG | 0.365168 | 3.2:-73815744 | None:intergenic |
| AATTTATGCTCTTCTTTCAA+TGG | 0.371325 | 3.2:-73815938 | None:intergenic |
| CAACCTGGGAGTAGCAAAAC+TGG | 0.401143 | 3.2:+73815164 | MS.gene75564:CDS |
| CGTGAGAATAAGCTCATTGA+TGG | 0.406564 | 3.2:+73815554 | MS.gene75564:CDS |
| TTATTGCATTACTCAGTTTG+TGG | 0.408341 | 3.2:+73816030 | MS.gene75564:CDS |
| GGAGATTAAGAGACAAGCTT+TGG | 0.411887 | 3.2:+73815418 | MS.gene75564:CDS |
| CGGAAAGAGCTTTGTTCTTG+TGG | 0.412229 | 3.2:+73819387 | MS.gene75564:CDS |
| TTTGAGACTGAGAAGCATAA+TGG | 0.425058 | 3.2:+73815863 | MS.gene75564:CDS |
| GTTACTTGCAGCTTTCTTTG+CGG | 0.431372 | 3.2:-73819669 | None:intergenic |
| AGCTTATTCTCACGCGGTTG+AGG | 0.441683 | 3.2:-73815545 | None:intergenic |
| TGACCCTACTAAGCATCTTA+AGG | 0.444211 | 3.2:+73815391 | MS.gene75564:CDS |
| TCTAATTCTTCTTTGAATGC+AGG | 0.444424 | 3.2:+73815194 | MS.gene75564:CDS |
| GCCAACTTTGCATCCAGCTC+AGG | 0.444703 | 3.2:-73815668 | None:intergenic |
| TCCCATCATCTTTCCCGCGT+TGG | 0.446029 | 3.2:+73819460 | MS.gene75564:CDS |
| ACTTGCTGATACAATCATAA+GGG | 0.446448 | 3.2:+73816066 | MS.gene75564:CDS |
| TGGCGCATCGACCTTTCATC+AGG | 0.446680 | 3.2:+73815807 | MS.gene75564:CDS |
| CTCCAACGCGGGAAAGATGA+TGG | 0.449918 | 3.2:-73819462 | None:intergenic |
| TTCAAATACTCTCTTTCTCT+AGG | 0.456945 | 3.2:-73815752 | None:intergenic |
| ATAAGAATTAAAATTACCAT+TGG | 0.460065 | 3.2:-73815273 | None:intergenic |
| ACCTGAGCTGGATGCAAAGT+TGG | 0.460914 | 3.2:+73815667 | MS.gene75564:CDS |
| TCCAGAATTCCAGCGATGTA+TGG | 0.464531 | 3.2:+73816177 | MS.gene75564:CDS |
| TACTAAGCATCTTAAGGAAA+AGG | 0.466933 | 3.2:+73815397 | MS.gene75564:CDS |
| TCAAAGGAAGTTATGTTCCT+AGG | 0.480411 | 3.2:+73816121 | MS.gene75564:CDS |
| AACTTGCTGATACAATCATA+AGG | 0.482131 | 3.2:+73816065 | MS.gene75564:CDS |
| ATTTGTTGCATCACCTGAGC+TGG | 0.492210 | 3.2:+73815655 | MS.gene75564:CDS |
| TTGATTGATTTCCTGATGAA+AGG | 0.494201 | 3.2:-73815818 | None:intergenic |
| CGAAGCCACATGGAAACGCT+TGG | 0.500307 | 3.2:+73819637 | MS.gene75564:CDS |
| AGTTATGTTCCTAGGTGAGT+TGG | 0.503134 | 3.2:+73816129 | MS.gene75564:CDS |
| CAGCAGGGCGCGAAGCCACA+TGG | 0.503391 | 3.2:+73819627 | MS.gene75564:CDS |
| TGATACATTGCTAAGCACTT+TGG | 0.506415 | 3.2:-73815995 | None:intergenic |
| TTTCCTTAAGATGCTTAGTA+GGG | 0.507948 | 3.2:-73815394 | None:intergenic |
| GCACTACCTCGCAAATCTGC+AGG | 0.509546 | 3.2:+73819713 | MS.gene75564:CDS |
| ATTTGAAAATGTCTTTGCAT+CGG | 0.516512 | 3.2:+73815768 | MS.gene75564:CDS |
| TCATAAACAATTTGCAAATG+AGG | 0.517103 | 3.2:-73815620 | None:intergenic |
| AGGTGAGTTGGAAGAAGTCT+TGG | 0.518621 | 3.2:+73816141 | MS.gene75564:CDS |
| AAGGAAGGTGAAGTGACAGC+AGG | 0.527915 | 3.2:+73819611 | MS.gene75564:CDS |
| AAGCACTTTGGTTTGTGCAA+CGG | 0.534767 | 3.2:-73815983 | None:intergenic |
| TTCGGAACATCCCTAAATGC+TGG | 0.537273 | 3.2:-73815305 | None:intergenic |
| TACTGAGAATGTAATGCAAG+AGG | 0.549162 | 3.2:+73815481 | MS.gene75564:CDS |
| AGTGATATTGTTACACAACC+TGG | 0.553068 | 3.2:+73815149 | MS.gene75564:CDS |
| TGGCGTTGAATTAGAGGAGG+AGG | 0.556878 | 3.2:+73815574 | MS.gene75564:CDS |
| GCCGATAACAAATAGTTCAA+AGG | 0.558222 | 3.2:+73816105 | MS.gene75564:CDS |
| CAAGGACAGTTTCATAGTCA+TGG | 0.562679 | 3.2:+73815218 | MS.gene75564:CDS |
| CACATGGAAACGCTTGGAGG+AGG | 0.564031 | 3.2:+73819643 | MS.gene75564:CDS |
| AGCCTTCGATGGATCCTTCG+TGG | 0.564901 | 3.2:+73815597 | MS.gene75564:CDS |
| TTTGTATTTCTCTCCAACGC+GGG | 0.566060 | 3.2:-73819473 | None:intergenic |
| AAATTTAATACCTGAAAATG+GGG | 0.572594 | 3.2:-73816238 | None:intergenic |
| GTTTGAGCAAGACGAATCAA+AGG | 0.576642 | 3.2:+73819592 | MS.gene75564:CDS |
| TCTTCTTTGAATGCAGGACA+AGG | 0.584808 | 3.2:+73815200 | MS.gene75564:CDS |
| GGTTCTGAGAATCGTGAACA+AGG | 0.586207 | 3.2:+73815086 | MS.gene75564:CDS |
| AATGCAAGAGGTTGTTAAGA+TGG | 0.587807 | 3.2:+73815493 | MS.gene75564:CDS |
| AGAGGAGGAGGAGCCTTCGA+TGG | 0.596230 | 3.2:+73815586 | MS.gene75564:CDS |
| ACAATAGCACCATACATCGC+TGG | 0.596620 | 3.2:-73816186 | None:intergenic |
| TCCAACGCGGGAAAGATGAT+GGG | 0.597175 | 3.2:-73819461 | None:intergenic |
| CTTGCTGATACAATCATAAG+GGG | 0.598460 | 3.2:+73816067 | MS.gene75564:CDS |
| GGTGGAAATTCAAGAAGCCA+TGG | 0.599824 | 3.2:+73815107 | MS.gene75564:CDS |
| CCTATGAATGAGAATTCCAA+TGG | 0.604698 | 3.2:+73815257 | MS.gene75564:CDS |
| GTTTGATTAAGTTCACGATG+TGG | 0.613263 | 3.2:-73819418 | None:intergenic |
| ATCTAACCTGCAGATTTGCG+AGG | 0.619938 | 3.2:-73819719 | None:intergenic |
| AGCCACATGGAAACGCTTGG+AGG | 0.620869 | 3.2:+73819640 | MS.gene75564:CDS |
| CTCCTCCAAGCGTTTCCATG+TGG | 0.625054 | 3.2:-73819642 | None:intergenic |
| AGACTTCTTCCAACTCACCT+AGG | 0.632209 | 3.2:-73816138 | None:intergenic |
| AGGAAGGTGAAGTGACAGCA+GGG | 0.635472 | 3.2:+73819612 | MS.gene75564:CDS |
| GTGATATTGTTACACAACCT+GGG | 0.639533 | 3.2:+73815150 | MS.gene75564:CDS |
| GAGCAAGACGAATCAAAGGA+AGG | 0.642249 | 3.2:+73819596 | MS.gene75564:CDS |
| TGATGGCGTTGAATTAGAGG+AGG | 0.644796 | 3.2:+73815571 | MS.gene75564:CDS |
| ATTTGCAAATGAGGCCACGA+AGG | 0.651420 | 3.2:-73815611 | None:intergenic |
| GGCCACGAAGGATCCATCGA+AGG | 0.651471 | 3.2:-73815599 | None:intergenic |
| AATTTAATACCTGAAAATGG+GGG | 0.674910 | 3.2:-73816237 | None:intergenic |
| ATACATCGCTGGAATTCTGG+AGG | 0.675794 | 3.2:-73816175 | None:intergenic |
| TATTCAAACAATGAGAAACA+CGG | 0.684922 | 3.2:-73816213 | None:intergenic |
| TCTGAGAATCGTGAACAAGG+TGG | 0.686992 | 3.2:+73815089 | MS.gene75564:CDS |
| TCAATGAGCTTATTCTCACG+CGG | 0.708503 | 3.2:-73815551 | None:intergenic |
| TTGCTGATACAATCATAAGG+GGG | 0.715338 | 3.2:+73816068 | MS.gene75564:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACATTATCTTAAAGTT+AGG | + | chr3.2:73816311-73816330 | MS.gene75564:intron | 15.0% |
| !! | AAAATTTAATACCTGAAAAT+GGG | - | chr3.2:73816242-73816261 | None:intergenic | 15.0% |
| !! | ATAAGAATTAAAATTACCAT+TGG | - | chr3.2:73815276-73815295 | None:intergenic | 15.0% |
| !!! | AAATTATATAAAGCGTTTTA+TGG | + | chr3.2:73818042-73818061 | MS.gene75564:intron | 15.0% |
| !! | AAATTTAATACCTGAAAATG+GGG | - | chr3.2:73816241-73816260 | None:intergenic | 20.0% |
| !! | AACAATTATATGCTATATGT+TGG | + | chr3.2:73818604-73818623 | MS.gene75564:intron | 20.0% |
| !! | AAGAATAATCCAAAAGTTAA+AGG | - | chr3.2:73816972-73816991 | None:intergenic | 20.0% |
| !! | AATTCAGATAATATTCACAA+TGG | - | chr3.2:73817081-73817100 | None:intergenic | 20.0% |
| !! | ATAGTATGTCTTTAAATTGT+AGG | - | chr3.2:73818560-73818579 | None:intergenic | 20.0% |
| !! | ATATAAAAGTAACTTTGTAG+AGG | - | chr3.2:73818127-73818146 | None:intergenic | 20.0% |
| !! | CATATATGCATAACTAATTA+AGG | + | chr3.2:73816589-73816608 | MS.gene75564:intron | 20.0% |
| !! | GAAAATTTAATACCTGAAAA+TGG | - | chr3.2:73816243-73816262 | None:intergenic | 20.0% |
| !! | GCTGTAAAAATTCAATAAAT+TGG | - | chr3.2:73818811-73818830 | None:intergenic | 20.0% |
| !! | TTAGCTAATTTAAAAGCTTA+TGG | + | chr3.2:73816856-73816875 | MS.gene75564:intron | 20.0% |
| !! | TTTACATTTAGAAGGTTTAA+GGG | - | chr3.2:73818931-73818950 | None:intergenic | 20.0% |
| !!! | AATTATTGTTTGGCTTTTTT+TGG | - | chr3.2:73819269-73819288 | None:intergenic | 20.0% |
| !!! | TTTTGTCTAGTAATTGTAAT+AGG | + | chr3.2:73818528-73818547 | MS.gene75564:intron | 20.0% |
| ! | AAACCTTCCTAAATTATGAA+GGG | - | chr3.2:73818157-73818176 | None:intergenic | 25.0% |
| ! | AAGATCTATTGTTATGTATG+AGG | + | chr3.2:73817833-73817852 | MS.gene75564:intron | 25.0% |
| ! | AATCAAAAATAACTGCTAAC+AGG | - | chr3.2:73817920-73817939 | None:intergenic | 25.0% |
| ! | AATGAGTTCAATATCTCATA+TGG | + | chr3.2:73817757-73817776 | MS.gene75564:intron | 25.0% |
| ! | AATTTAATACCTGAAAATGG+GGG | - | chr3.2:73816240-73816259 | None:intergenic | 25.0% |
| ! | AATTTATGCTCTTCTTTCAA+TGG | - | chr3.2:73815941-73815960 | None:intergenic | 25.0% |
| ! | ACCAAAACTATAGAAATTTG+TGG | - | chr3.2:73817486-73817505 | None:intergenic | 25.0% |
| ! | ACTCTGCATAAATTATTGTT+TGG | - | chr3.2:73819279-73819298 | None:intergenic | 25.0% |
| ! | AGAGAAATACAAAAACTCAT+TGG | + | chr3.2:73819483-73819502 | MS.gene75564:CDS | 25.0% |
| ! | AGATCTATTGTTATGTATGA+GGG | + | chr3.2:73817834-73817853 | MS.gene75564:intron | 25.0% |
| ! | ATAAGAATGTTATGTTGGAT+AGG | - | chr3.2:73817152-73817171 | None:intergenic | 25.0% |
| ! | ATTTAAAAGCTTATGGTCTT+AGG | + | chr3.2:73816863-73816882 | MS.gene75564:intron | 25.0% |
| ! | ATTTGAAAATGTCTTTGCAT+CGG | + | chr3.2:73815768-73815787 | MS.gene75564:CDS | 25.0% |
| ! | CAATTACTAGACAAAACTTA+TGG | - | chr3.2:73818524-73818543 | None:intergenic | 25.0% |
| ! | CAGATATAAGAATGTTATGT+TGG | - | chr3.2:73817157-73817176 | None:intergenic | 25.0% |
| ! | CATATGATTATGACATTCTA+TGG | - | chr3.2:73816560-73816579 | None:intergenic | 25.0% |
| ! | CTTTACATTTAGAAGGTTTA+AGG | - | chr3.2:73818932-73818951 | None:intergenic | 25.0% |
| ! | CTTTGTTCTTTACATTTAGA+AGG | - | chr3.2:73818939-73818958 | None:intergenic | 25.0% |
| ! | GATGTCATAAATGTAGTAAT+TGG | - | chr3.2:73817898-73817917 | None:intergenic | 25.0% |
| ! | GTTATAAGACACATATTTAC+TGG | - | chr3.2:73816637-73816656 | None:intergenic | 25.0% |
| ! | TAAACCTTCCTAAATTATGA+AGG | - | chr3.2:73818158-73818177 | None:intergenic | 25.0% |
| ! | TATTCAAACAATGAGAAACA+CGG | - | chr3.2:73816216-73816235 | None:intergenic | 25.0% |
| ! | TCATAAACAATTTGCAAATG+AGG | - | chr3.2:73815623-73815642 | None:intergenic | 25.0% |
| ! | TCATTCTTGTCTATTATACA+CGG | - | chr3.2:73818375-73818394 | None:intergenic | 25.0% |
| ! | TTCCATGCATATGTTTAAAA+AGG | - | chr3.2:73817633-73817652 | None:intergenic | 25.0% |
| ! | TTTATGGGGAAAAATAGAAT+CGG | - | chr3.2:73817125-73817144 | None:intergenic | 25.0% |
| ! | TTTCTATTGATATGTCAAAC+AGG | + | chr3.2:73818091-73818110 | MS.gene75564:intron | 25.0% |
| !! | CTTCATAGTTTCAAGTAAAA+TGG | - | chr3.2:73818774-73818793 | None:intergenic | 25.0% |
| !! | GAACATTTAAAGTCAAACTA+TGG | - | chr3.2:73819520-73819539 | None:intergenic | 25.0% |
| !! | TTAGTTGATGTTGCATTATT+GGG | - | chr3.2:73816895-73816914 | None:intergenic | 25.0% |
| !! | TTTAGTTGATGTTGCATTAT+TGG | - | chr3.2:73816896-73816915 | None:intergenic | 25.0% |
| !! | TTTTCTTTCATTACATGTCT+CGG | + | chr3.2:73818849-73818868 | MS.gene75564:intron | 25.0% |
| !!! | AAACACTTCTAGAATGAAAT+TGG | - | chr3.2:73818986-73819005 | None:intergenic | 25.0% |
| !!! | AACAATATCACTGTTTTTTG+AGG | - | chr3.2:73815141-73815160 | None:intergenic | 25.0% |
| !!! | AATTTTCCTTTAAGCTTTAG+AGG | + | chr3.2:73817261-73817280 | MS.gene75564:intron | 25.0% |
| !!! | AGCTTTTTTATAAACAAGCT+CGG | - | chr3.2:73815341-73815360 | None:intergenic | 25.0% |
| !!! | CTTCTTTTACCTTTAACTTT+TGG | + | chr3.2:73816960-73816979 | MS.gene75564:intron | 25.0% |
| !!! | GAACAAACTGTAACTTTTTT+CGG | - | chr3.2:73817708-73817727 | None:intergenic | 25.0% |
| !!! | TCCTTTGAACTATTTGTTAT+CGG | - | chr3.2:73816109-73816128 | None:intergenic | 25.0% |
| !!! | TGAAAAGTATATCCTTTTCT+TGG | - | chr3.2:73816403-73816422 | None:intergenic | 25.0% |
| !!! | TTGATCAATCGTTTATTTTG+AGG | + | chr3.2:73815702-73815721 | MS.gene75564:CDS | 25.0% |
| !!! | TTTTTTCAACGAAAAAAGAG+CGG | - | chr3.2:73816295-73816314 | None:intergenic | 25.0% |
| AAATCTTGAATTGCTGTAGA+AGG | + | chr3.2:73819114-73819133 | MS.gene75564:intron | 30.0% | |
| AAGAAAAAATGACAGAACAC+TGG | - | chr3.2:73818836-73818855 | None:intergenic | 30.0% | |
| AAGACATACTATATTCTGTC+AGG | + | chr3.2:73818568-73818587 | MS.gene75564:intron | 30.0% | |
| AAGTGGAAAAGATGAAATGA+AGG | - | chr3.2:73817320-73817339 | None:intergenic | 30.0% | |
| AATTCAAGATTTAGACGCAT+AGG | - | chr3.2:73819106-73819125 | None:intergenic | 30.0% | |
| AGCTGTGACGATAAATAATT+AGG | + | chr3.2:73818399-73818418 | MS.gene75564:intron | 30.0% | |
| AGTATCATAAACTCTTCTCA+AGG | - | chr3.2:73818016-73818035 | None:intergenic | 30.0% | |
| AGTTGTAAGTATGTGTCTTA+AGG | - | chr3.2:73816461-73816480 | None:intergenic | 30.0% | |
| ATAAAGTATAGACGATTTGC+AGG | - | chr3.2:73818439-73818458 | None:intergenic | 30.0% | |
| ATTCCTAAAAAGTCCTCAAA+AGG | + | chr3.2:73815065-73815084 | MS.gene75564:CDS | 30.0% | |
| GACGAATCTAAATTTGACAT+GGG | - | chr3.2:73818704-73818723 | None:intergenic | 30.0% | |
| GATTATATGCATCAAGTGAA+TGG | + | chr3.2:73819212-73819231 | MS.gene75564:intron | 30.0% | |
| TACTAAGCATCTTAAGGAAA+AGG | + | chr3.2:73815397-73815416 | MS.gene75564:CDS | 30.0% | |
| TCTAATTCTTCTTTGAATGC+AGG | + | chr3.2:73815194-73815213 | MS.gene75564:CDS | 30.0% | |
| TGACGAATCTAAATTTGACA+TGG | - | chr3.2:73818705-73818724 | None:intergenic | 30.0% | |
| TGGATTACAACAAATAACCA+GGG | - | chr3.2:73816540-73816559 | None:intergenic | 30.0% | |
| TGTACTTTCACTTTCATCAA+TGG | - | chr3.2:73817407-73817426 | None:intergenic | 30.0% | |
| TGTGACGATAAATAATTAGG+TGG | + | chr3.2:73818402-73818421 | MS.gene75564:intron | 30.0% | |
| TTAATCTTGATGCAAGCTTA+AGG | + | chr3.2:73816775-73816794 | MS.gene75564:intron | 30.0% | |
| TTATTGCATTACTCAGTTTG+TGG | + | chr3.2:73816030-73816049 | MS.gene75564:CDS | 30.0% | |
| TTCAAATACTCTCTTTCTCT+AGG | - | chr3.2:73815755-73815774 | None:intergenic | 30.0% | |
| TTTCCTTAAGATGCTTAGTA+GGG | - | chr3.2:73815397-73815416 | None:intergenic | 30.0% | |
| TTTGAGAAAGATCCAACTTT+GGG | + | chr3.2:73819243-73819262 | MS.gene75564:intron | 30.0% | |
| ! | ACTGATATTGTCTTTGTTTC+AGG | + | chr3.2:73819361-73819380 | MS.gene75564:intron | 30.0% |
| ! | ACTTGCTGATACAATCATAA+GGG | + | chr3.2:73816066-73816085 | MS.gene75564:CDS | 30.0% |
| ! | AGAAGAGCATAAATTGTTTC+TGG | + | chr3.2:73815946-73815965 | MS.gene75564:CDS | 30.0% |
| ! | ATGGATTACAACAAATAACC+AGG | - | chr3.2:73816541-73816560 | None:intergenic | 30.0% |
| ! | CACCTTTTTAAACATATGCA+TGG | + | chr3.2:73817628-73817647 | MS.gene75564:intron | 30.0% |
| ! | CTCTCTTGTGCTATTAATTT+CGG | + | chr3.2:73816824-73816843 | MS.gene75564:intron | 30.0% |
| ! | CTTGAAGGTAATTTTTGTGT+TGG | + | chr3.2:73818212-73818231 | MS.gene75564:intron | 30.0% |
| ! | GCCACAAATTTCTATAGTTT+TGG | + | chr3.2:73817482-73817501 | MS.gene75564:intron | 30.0% |
| ! | TAATGGAATTGCTGAGTTTT+TGG | + | chr3.2:73815880-73815899 | MS.gene75564:CDS | 30.0% |
| ! | TATAAACAAGCTCGGTTTTT+CGG | - | chr3.2:73815333-73815352 | None:intergenic | 30.0% |
| ! | TGGAAATTTTCAGCTGTAAT+TGG | - | chr3.2:73817384-73817403 | None:intergenic | 30.0% |
| ! | TTGATTGATTTCCTGATGAA+AGG | - | chr3.2:73815821-73815840 | None:intergenic | 30.0% |
| ! | TTTTCCTTAAGATGCTTAGT+AGG | - | chr3.2:73815398-73815417 | None:intergenic | 30.0% |
| !! | AAAGTACCTCTAAAGCTTAA+AGG | - | chr3.2:73817270-73817289 | None:intergenic | 30.0% |
| !! | AACTTGCTGATACAATCATA+AGG | + | chr3.2:73816065-73816084 | MS.gene75564:CDS | 30.0% |
| !! | ATTTTTCAAACACCTTTTGC+AGG | - | chr3.2:73816740-73816759 | None:intergenic | 30.0% |
| !! | TAAAAGTGTTTGTAAGCTTG+TGG | + | chr3.2:73818189-73818208 | MS.gene75564:intron | 30.0% |
| !! | TTTTGAGAAAGATCCAACTT+TGG | + | chr3.2:73819242-73819261 | MS.gene75564:intron | 30.0% |
| !!! | AACTGTAACTTTTTTCGGAT+TGG | - | chr3.2:73817703-73817722 | None:intergenic | 30.0% |
| !!! | ACTGTAACTTTTTTCGGATT+GGG | - | chr3.2:73817702-73817721 | None:intergenic | 30.0% |
| !!! | ATTTTGATTCGTCTTTTGCA+TGG | + | chr3.2:73819048-73819067 | MS.gene75564:intron | 30.0% |
| AAAGAACAAAGCATGTGTCA+AGG | + | chr3.2:73818948-73818967 | MS.gene75564:intron | 35.0% | |
| AACATACAACTCCCATTGTA+GGG | + | chr3.2:73817947-73817966 | MS.gene75564:intron | 35.0% | |
| AAGAACAAAGCATGTGTCAA+GGG | + | chr3.2:73818949-73818968 | MS.gene75564:intron | 35.0% | |
| AATGCAAGAGGTTGTTAAGA+TGG | + | chr3.2:73815493-73815512 | MS.gene75564:CDS | 35.0% | |
| AATTATATGCAACAAGTCCC+TGG | + | chr3.2:73816520-73816539 | MS.gene75564:intron | 35.0% | |
| AATTTGTGGCATCGTTTCAA+AGG | - | chr3.2:73817472-73817491 | None:intergenic | 35.0% | |
| ACACATATTTACTGGAAACC+TGG | - | chr3.2:73816629-73816648 | None:intergenic | 35.0% | |
| ACATAAGATCAACTTCCTCT+AGG | - | chr3.2:73818283-73818302 | None:intergenic | 35.0% | |
| ACATTTGTGATTCCCAACAA+TGG | - | chr3.2:73817357-73817376 | None:intergenic | 35.0% | |
| ACCTTCTTACTCTATCAAGA+AGG | + | chr3.2:73817807-73817826 | MS.gene75564:intron | 35.0% | |
| ACTTTCACTTTCATCAATGG+TGG | - | chr3.2:73817404-73817423 | None:intergenic | 35.0% | |
| AGAATGTTATGTTGGATAGG+TGG | - | chr3.2:73817149-73817168 | None:intergenic | 35.0% | |
| AGTACGTCCCTTCATAATTT+AGG | + | chr3.2:73818147-73818166 | MS.gene75564:intron | 35.0% | |
| AGTGATATTGTTACACAACC+TGG | + | chr3.2:73815149-73815168 | MS.gene75564:CDS | 35.0% | |
| ATGAAGCTTTACCAGCATTT+AGG | + | chr3.2:73815294-73815313 | MS.gene75564:CDS | 35.0% | |
| CAAAAATCGTTCCTGAACTA+CGG | + | chr3.2:73816489-73816508 | MS.gene75564:intron | 35.0% | |
| CAAAGATACACTATCACTAG+TGG | - | chr3.2:73818672-73818691 | None:intergenic | 35.0% | |
| CATAAGATCAACTTCCTCTA+GGG | - | chr3.2:73818282-73818301 | None:intergenic | 35.0% | |
| CCATTGGAATTCTCATTCAT+AGG | - | chr3.2:73815260-73815279 | None:intergenic | 35.0% | |
| CCTATGAATGAGAATTCCAA+TGG | + | chr3.2:73815257-73815276 | MS.gene75564:CDS | 35.0% | |
| CTAAGCATGGCATACATAAA+AGG | - | chr3.2:73818898-73818917 | None:intergenic | 35.0% | |
| CTATTGTTATGTATGAGGGA+TGG | + | chr3.2:73817838-73817857 | MS.gene75564:intron | 35.0% | |
| CTTGCTGATACAATCATAAG+GGG | + | chr3.2:73816067-73816086 | MS.gene75564:CDS | 35.0% | |
| GCCGATAACAAATAGTTCAA+AGG | + | chr3.2:73816105-73816124 | MS.gene75564:CDS | 35.0% | |
| GGTAAAAGAAAATGAGCTTG+AGG | - | chr3.2:73816274-73816293 | None:intergenic | 35.0% | |
| GTGATATTGTTACACAACCT+GGG | + | chr3.2:73815150-73815169 | MS.gene75564:CDS | 35.0% | |
| GTTGATCTTATGTTCATCTG+AGG | + | chr3.2:73818290-73818309 | MS.gene75564:intron | 35.0% | |
| GTTGATGTCTTTATCTGAAG+AGG | + | chr3.2:73818489-73818508 | MS.gene75564:intron | 35.0% | |
| GTTTAGCAGCTTTCTATGAA+GGG | - | chr3.2:73816671-73816690 | None:intergenic | 35.0% | |
| GTTTGATTAAGTTCACGATG+TGG | - | chr3.2:73819421-73819440 | None:intergenic | 35.0% | |
| TAACATACAACTCCCATTGT+AGG | + | chr3.2:73817946-73817965 | MS.gene75564:intron | 35.0% | |
| TAATAGCACAAGAGAGATGA+GGG | - | chr3.2:73816820-73816839 | None:intergenic | 35.0% | |
| TACTGAGAATGTAATGCAAG+AGG | + | chr3.2:73815481-73815500 | MS.gene75564:CDS | 35.0% | |
| TAGTAGAATCTTGTCCTATG+CGG | - | chr3.2:73817052-73817071 | None:intergenic | 35.0% | |
| TATATGCCAACCATTAAGAG+TGG | - | chr3.2:73816928-73816947 | None:intergenic | 35.0% | |
| TCAAAGGAAGTTATGTTCCT+AGG | + | chr3.2:73816121-73816140 | MS.gene75564:CDS | 35.0% | |
| TCCTAGTAACTTCACATTGA+AGG | + | chr3.2:73817971-73817990 | MS.gene75564:intron | 35.0% | |
| TCCTTCAATGTGAAGTTACT+AGG | - | chr3.2:73817975-73817994 | None:intergenic | 35.0% | |
| TCTATACACAGACTACATAG+AGG | - | chr3.2:73817521-73817540 | None:intergenic | 35.0% | |
| TGAAGCTTTACCAGCATTTA+GGG | + | chr3.2:73815295-73815314 | MS.gene75564:CDS | 35.0% | |
| TGAGTAATAGAGACATCATG+CGG | - | chr3.2:73819174-73819193 | None:intergenic | 35.0% | |
| TGATACATTGCTAAGCACTT+TGG | - | chr3.2:73815998-73816017 | None:intergenic | 35.0% | |
| TGTTTAGCAGCTTTCTATGA+AGG | - | chr3.2:73816672-73816691 | None:intergenic | 35.0% | |
| TTAATAGCACAAGAGAGATG+AGG | - | chr3.2:73816821-73816840 | None:intergenic | 35.0% | |
| TTGCTGATACAATCATAAGG+GGG | + | chr3.2:73816068-73816087 | MS.gene75564:CDS | 35.0% | |
| ! | AATGACTATCTTTTCCCTAG+AGG | + | chr3.2:73818265-73818284 | MS.gene75564:intron | 35.0% |
| ! | GATATTGTCTTTGTTTCAGG+TGG | + | chr3.2:73819364-73819383 | MS.gene75564:intron | 35.0% |
| ! | TCGTCTTTTGCATGGATTTT+TGG | + | chr3.2:73819056-73819075 | MS.gene75564:intron | 35.0% |
| ! | TGGTTGCTTTCTTCATTGAT+GGG | + | chr3.2:73819076-73819095 | MS.gene75564:intron | 35.0% |
| ! | TTGGTTGCTTTCTTCATTGA+TGG | + | chr3.2:73819075-73819094 | MS.gene75564:intron | 35.0% |
| ! | TTTACTGTTTTGTGTCTGCT+TGG | - | chr3.2:73817739-73817758 | None:intergenic | 35.0% |
| ! | TTTGAGACTGAGAAGCATAA+TGG | + | chr3.2:73815863-73815882 | MS.gene75564:CDS | 35.0% |
| ! | TTTTGTATTTCTCTCCAACG+CGG | - | chr3.2:73819477-73819496 | None:intergenic | 35.0% |
| !! | ATGTTGGATAGGTGGTTTTA+TGG | - | chr3.2:73817141-73817160 | None:intergenic | 35.0% |
| !! | ATTCTGGGGAGTATCATTAA+TGG | + | chr3.2:73815905-73815924 | MS.gene75564:CDS | 35.0% |
| !! | CTGAGTTTTTGGAAATTCTG+GGG | + | chr3.2:73815891-73815910 | MS.gene75564:CDS | 35.0% |
| !! | GAACCTTTTGAGGACTTTTT+AGG | - | chr3.2:73815071-73815090 | None:intergenic | 35.0% |
| !! | GAGCTATAGAAGCATTGATA+AGG | - | chr3.2:73817010-73817029 | None:intergenic | 35.0% |
| !! | GCTGAGTTTTTGGAAATTCT+GGG | + | chr3.2:73815890-73815909 | MS.gene75564:CDS | 35.0% |
| !! | TGCTGAGTTTTTGGAAATTC+TGG | + | chr3.2:73815889-73815908 | MS.gene75564:CDS | 35.0% |
| !!! | TCTATAGTTTTGGTCCTAAG+AGG | + | chr3.2:73817492-73817511 | MS.gene75564:intron | 35.0% |
| !!! | TGTTGGATAGGTGGTTTTAT+GGG | - | chr3.2:73817140-73817159 | None:intergenic | 35.0% |
| AACCCTATGGTTTCCATTGT+TGG | + | chr3.2:73817341-73817360 | MS.gene75564:intron | 40.0% | |
| AATAGCACAAGAGAGATGAG+GGG | - | chr3.2:73816819-73816838 | None:intergenic | 40.0% | |
| ACCATTAAGAGTGGTTTCAG+AGG | - | chr3.2:73816919-73816938 | None:intergenic | 40.0% | |
| ACCCTATGGTTTCCATTGTT+GGG | + | chr3.2:73817342-73817361 | MS.gene75564:intron | 40.0% | |
| AGAAAGCTGCTAAACATGCT+AGG | + | chr3.2:73816676-73816695 | MS.gene75564:intron | 40.0% | |
| AGTTACTAGGATCCCTACAA+TGG | - | chr3.2:73817962-73817981 | None:intergenic | 40.0% | |
| AGTTATGTTCCTAGGTGAGT+TGG | + | chr3.2:73816129-73816148 | MS.gene75564:CDS | 40.0% | |
| ATCTTGATGCAAGCTTAAGG+AGG | + | chr3.2:73816778-73816797 | MS.gene75564:intron | 40.0% | |
| ATGTCTTTGCATCGGATCTA+TGG | + | chr3.2:73815776-73815795 | MS.gene75564:CDS | 40.0% | |
| CAAGGACAGTTTCATAGTCA+TGG | + | chr3.2:73815218-73815237 | MS.gene75564:CDS | 40.0% | |
| CATATGGACTCATTTCAGCA+TGG | + | chr3.2:73817773-73817792 | MS.gene75564:intron | 40.0% | |
| CGTCCCTTCATAATTTAGGA+AGG | + | chr3.2:73818151-73818170 | MS.gene75564:intron | 40.0% | |
| CGTGAGAATAAGCTCATTGA+TGG | + | chr3.2:73815554-73815573 | MS.gene75564:CDS | 40.0% | |
| CTACTGCAATTTGCAAGACT+TGG | + | chr3.2:73819138-73819157 | MS.gene75564:intron | 40.0% | |
| CTGAAACCACTCTTAATGGT+TGG | + | chr3.2:73816919-73816938 | MS.gene75564:intron | 40.0% | |
| GCCTTCTTGATAGAGTAAGA+AGG | - | chr3.2:73817811-73817830 | None:intergenic | 40.0% | |
| GGAGATTAAGAGACAAGCTT+TGG | + | chr3.2:73815418-73815437 | MS.gene75564:CDS | 40.0% | |
| GGCCATAATGAACAGAAAGT+CGG | - | chr3.2:73818354-73818373 | None:intergenic | 40.0% | |
| GGGATCGTAAAAACTAAGCA+TGG | - | chr3.2:73818911-73818930 | None:intergenic | 40.0% | |
| GGTTGGCATATAGTTCTTCT+TGG | + | chr3.2:73816936-73816955 | MS.gene75564:intron | 40.0% | |
| GTCTGTGTATAGACTTTCCT+TGG | + | chr3.2:73817528-73817547 | MS.gene75564:intron | 40.0% | |
| GTCTTTATCTGAAGAGGTGA+AGG | + | chr3.2:73818495-73818514 | MS.gene75564:intron | 40.0% | |
| GTTACTAGGATCCCTACAAT+GGG | - | chr3.2:73817961-73817980 | None:intergenic | 40.0% | |
| GTTACTTGCAGCTTTCTTTG+CGG | - | chr3.2:73819672-73819691 | None:intergenic | 40.0% | |
| GTTGTACGTGAGTGAATGTT+AGG | - | chr3.2:73817214-73817233 | None:intergenic | 40.0% | |
| GTTTGAGCAAGACGAATCAA+AGG | + | chr3.2:73819592-73819611 | MS.gene75564:CDS | 40.0% | |
| TAAGGGGGTTATTGAAGTAC+TGG | + | chr3.2:73816083-73816102 | MS.gene75564:CDS | 40.0% | |
| TCAATGAGCTTATTCTCACG+CGG | - | chr3.2:73815554-73815573 | None:intergenic | 40.0% | |
| TCCCAACAATGGAAACCATA+GGG | - | chr3.2:73817346-73817365 | None:intergenic | 40.0% | |
| TCGGATCTATGGCAAGTTAA+TGG | + | chr3.2:73815787-73815806 | MS.gene75564:CDS | 40.0% | |
| TCTTCTTTGAATGCAGGACA+AGG | + | chr3.2:73815200-73815219 | MS.gene75564:CDS | 40.0% | |
| TGACCCTACTAAGCATCTTA+AGG | + | chr3.2:73815391-73815410 | MS.gene75564:CDS | 40.0% | |
| TTCCCAACAATGGAAACCAT+AGG | - | chr3.2:73817347-73817366 | None:intergenic | 40.0% | |
| TTTGTAAGCTTGTGGCTTGA+AGG | + | chr3.2:73818197-73818216 | MS.gene75564:intron | 40.0% | |
| TTTGTATTTCTCTCCAACGC+GGG | - | chr3.2:73819476-73819495 | None:intergenic | 40.0% | |
| ! | AAGCTTATGGTCTTAGGAGA+TGG | + | chr3.2:73816869-73816888 | MS.gene75564:intron | 40.0% |
| ! | ACGATTCTCAGAACCTTTTG+AGG | - | chr3.2:73815081-73815100 | None:intergenic | 40.0% |
| ! | ATTGTCTTTGTTTCAGGTGG+CGG | + | chr3.2:73819367-73819386 | MS.gene75564:intron | 40.0% |
| ! | TCTTTTCCACTTGAACCCTA+TGG | + | chr3.2:73817328-73817347 | MS.gene75564:intron | 40.0% |
| ! | TTTGAATAGCCCCCATTTTC+AGG | + | chr3.2:73816228-73816247 | MS.gene75564:CDS | 40.0% |
| !! | AAGCACTTTGGTTTGTGCAA+CGG | - | chr3.2:73815986-73816005 | None:intergenic | 40.0% |
| !! | AAGCTCGGTTTTTCGGAATT+CGG | - | chr3.2:73815326-73815345 | None:intergenic | 40.0% |
| !! | ACCTCTGAAACCACTCTTAA+TGG | + | chr3.2:73816915-73816934 | MS.gene75564:intron | 40.0% |
| !! | CATTGATGGCGTTGAATTAG+AGG | + | chr3.2:73815568-73815587 | MS.gene75564:CDS | 40.0% |
| !! | CTCTCTTTCTCTAGGATCTT+CGG | - | chr3.2:73815747-73815766 | None:intergenic | 40.0% |
| !! | TCTAGAAGTGTTTGCATGAC+TGG | + | chr3.2:73818993-73819012 | MS.gene75564:intron | 40.0% |
| !! | TGAGCTTGTTAACCCTAAGT+CGG | - | chr3.2:73817668-73817687 | None:intergenic | 40.0% |
| !! | TGCCGACTTTCTGTTCATTA+TGG | + | chr3.2:73818349-73818368 | MS.gene75564:intron | 40.0% |
| !!! | GTTGGATAGGTGGTTTTATG+GGG | - | chr3.2:73817139-73817158 | None:intergenic | 40.0% |
| !!! | TTTTTGAGGTTGCAACACCA+TGG | - | chr3.2:73815127-73815146 | None:intergenic | 40.0% |
| AATCTTGTCCTATGCGGTCT+GGG | - | chr3.2:73817046-73817065 | None:intergenic | 45.0% | |
| ACAATAGCACCATACATCGC+TGG | - | chr3.2:73816189-73816208 | None:intergenic | 45.0% | |
| ACATGCAAAAAGTCGTGCAG+AGG | - | chr3.2:73817875-73817894 | None:intergenic | 45.0% | |
| ACCATACATCGCTGGAATTC+TGG | - | chr3.2:73816181-73816200 | None:intergenic | 45.0% | |
| AGACTTCTTCCAACTCACCT+AGG | - | chr3.2:73816141-73816160 | None:intergenic | 45.0% | |
| ATACATCGCTGGAATTCTGG+AGG | - | chr3.2:73816178-73816197 | None:intergenic | 45.0% | |
| ATAGCACAAGAGAGATGAGG+GGG | - | chr3.2:73816818-73816837 | None:intergenic | 45.0% | |
| ATGCAAGCTTAAGGAGGTGA+GGG | + | chr3.2:73816784-73816803 | MS.gene75564:intron | 45.0% | |
| ATTGAGCAAGTCCGTAGTTC+AGG | - | chr3.2:73816503-73816522 | None:intergenic | 45.0% | |
| ATTTGCAAATGAGGCCACGA+AGG | - | chr3.2:73815614-73815633 | None:intergenic | 45.0% | |
| CAAAGCATGTGTCAAGGGAT+TGG | + | chr3.2:73818954-73818973 | MS.gene75564:intron | 45.0% | |
| CTACATAGAGGCTTCCTCTT+AGG | - | chr3.2:73817509-73817528 | None:intergenic | 45.0% | |
| GAGCAAGACGAATCAAAGGA+AGG | + | chr3.2:73819596-73819615 | MS.gene75564:CDS | 45.0% | |
| GCAGTGTTCTTGCCAAGAAA+AGG | + | chr3.2:73816388-73816407 | MS.gene75564:intron | 45.0% | |
| GGTGGAAATTCAAGAAGCCA+TGG | + | chr3.2:73815107-73815126 | MS.gene75564:CDS | 45.0% | |
| TCCAGAATTCCAGCGATGTA+TGG | + | chr3.2:73816177-73816196 | MS.gene75564:CDS | 45.0% | |
| TCCAGTTCCTTCATGACCAA+TGG | + | chr3.2:73819306-73819325 | MS.gene75564:intron | 45.0% | |
| TCCATTGGTCATGAAGGAAC+TGG | - | chr3.2:73819310-73819329 | None:intergenic | 45.0% | |
| TCTGAGAATCGTGAACAAGG+TGG | + | chr3.2:73815089-73815108 | MS.gene75564:CDS | 45.0% | |
| TGGAAACCATAGGGTTCAAG+TGG | - | chr3.2:73817337-73817356 | None:intergenic | 45.0% | |
| TTCGGAACATCCCTAAATGC+TGG | - | chr3.2:73815308-73815327 | None:intergenic | 45.0% | |
| TTGTGTCTGCTTGGTCATCA+AGG | - | chr3.2:73817730-73817749 | None:intergenic | 45.0% | |
| ! | AAGGAGTACAGTCAGATTCC+AGG | + | chr3.2:73816608-73816627 | MS.gene75564:intron | 45.0% |
| ! | AGGTGAGTTGGAAGAAGTCT+TGG | + | chr3.2:73816141-73816160 | MS.gene75564:CDS | 45.0% |
| ! | ATTTGTTGCATCACCTGAGC+TGG | + | chr3.2:73815655-73815674 | MS.gene75564:CDS | 45.0% |
| ! | TCAAACACCTTTTGCAGGCA+GGG | - | chr3.2:73816735-73816754 | None:intergenic | 45.0% |
| ! | TGATGGCGTTGAATTAGAGG+AGG | + | chr3.2:73815571-73815590 | MS.gene75564:CDS | 45.0% |
| ! | TTACCAGTTTTGCTACTCCC+AGG | - | chr3.2:73815170-73815189 | None:intergenic | 45.0% |
| ! | TTCAAACACCTTTTGCAGGC+AGG | - | chr3.2:73816736-73816755 | None:intergenic | 45.0% |
| !! | CGGAAAGAGCTTTGTTCTTG+TGG | + | chr3.2:73819387-73819406 | MS.gene75564:CDS | 45.0% |
| !! | GGTTCTGAGAATCGTGAACA+AGG | + | chr3.2:73815086-73815105 | MS.gene75564:CDS | 45.0% |
| !!! | GGCTTTTTTTGGCCCAAAGT+TGG | - | chr3.2:73819258-73819277 | None:intergenic | 45.0% |
| AACACAGCGAAACTGCTCCA+AGG | - | chr3.2:73817548-73817567 | None:intergenic | 50.0% | |
| AAGGAAGGTGAAGTGACAGC+AGG | + | chr3.2:73819611-73819630 | MS.gene75564:CDS | 50.0% | |
| ACCCTAAGTCGGAAAGCAGT+AGG | - | chr3.2:73817657-73817676 | None:intergenic | 50.0% | |
| ACCCTACTGCTTTCCGACTT+AGG | + | chr3.2:73817652-73817671 | MS.gene75564:intron | 50.0% | |
| ACCTGAGCTGGATGCAAAGT+TGG | + | chr3.2:73815667-73815686 | MS.gene75564:CDS | 50.0% | |
| AGCTTATTCTCACGCGGTTG+AGG | - | chr3.2:73815548-73815567 | None:intergenic | 50.0% | |
| AGGAAGGTGAAGTGACAGCA+GGG | + | chr3.2:73819612-73819631 | MS.gene75564:CDS | 50.0% | |
| CAACCTGGGAGTAGCAAAAC+TGG | + | chr3.2:73815164-73815183 | MS.gene75564:CDS | 50.0% | |
| CATTGCAACTGCAGCTCCAT+TGG | - | chr3.2:73819325-73819344 | None:intergenic | 50.0% | |
| CCCTAAGTCGGAAAGCAGTA+GGG | - | chr3.2:73817656-73817675 | None:intergenic | 50.0% | |
| CCCTACTGCTTTCCGACTTA+GGG | + | chr3.2:73817653-73817672 | MS.gene75564:intron | 50.0% | |
| GAATCTTGTCCTATGCGGTC+TGG | - | chr3.2:73817047-73817066 | None:intergenic | 50.0% | |
| GATGCAAGCTTAAGGAGGTG+AGG | + | chr3.2:73816783-73816802 | MS.gene75564:intron | 50.0% | |
| GCAAAAAGTCGTGCAGAGGA+GGG | - | chr3.2:73817871-73817890 | None:intergenic | 50.0% | |
| TCCAACGCGGGAAAGATGAT+GGG | - | chr3.2:73819464-73819483 | None:intergenic | 50.0% | |
| TCCAGGTCAGGAAACAGTCA+GGG | + | chr3.2:73817582-73817601 | MS.gene75564:intron | 50.0% | |
| TGCAAAAAGTCGTGCAGAGG+AGG | - | chr3.2:73817872-73817891 | None:intergenic | 50.0% | |
| TGCAGCTCCATTGGTCATGA+AGG | - | chr3.2:73819316-73819335 | None:intergenic | 50.0% | |
| TTTCCTGACCTGGAGTGTGT+CGG | - | chr3.2:73817576-73817595 | None:intergenic | 50.0% | |
| ! | CAGGCAGGGTTTGGAGTAAA+AGG | - | chr3.2:73816721-73816740 | None:intergenic | 50.0% |
| ! | TGGCGTTGAATTAGAGGAGG+AGG | + | chr3.2:73815574-73815593 | MS.gene75564:CDS | 50.0% |
| AGCCACATGGAAACGCTTGG+AGG | + | chr3.2:73819640-73819659 | MS.gene75564:CDS | 55.0% | |
| AGCCTTCGATGGATCCTTCG+TGG | + | chr3.2:73815597-73815616 | MS.gene75564:CDS | 55.0% | |
| AGCTTAAGGAGGTGAGGGTG+AGG | + | chr3.2:73816789-73816808 | MS.gene75564:intron | 55.0% | |
| CACATGGAAACGCTTGGAGG+AGG | + | chr3.2:73819643-73819662 | MS.gene75564:CDS | 55.0% | |
| CATTTGTGCCCAGACCGCAT+AGG | + | chr3.2:73817035-73817054 | MS.gene75564:intron | 55.0% | |
| CGAAGCCACATGGAAACGCT+TGG | + | chr3.2:73819637-73819656 | MS.gene75564:CDS | 55.0% | |
| CTCCAAACCCTGCCTGCAAA+AGG | + | chr3.2:73816725-73816744 | MS.gene75564:intron | 55.0% | |
| CTCCAACGCGGGAAAGATGA+TGG | - | chr3.2:73819465-73819484 | None:intergenic | 55.0% | |
| CTCCAGGTCAGGAAACAGTC+AGG | + | chr3.2:73817581-73817600 | MS.gene75564:intron | 55.0% | |
| CTCCTCCAAGCGTTTCCATG+TGG | - | chr3.2:73819645-73819664 | None:intergenic | 55.0% | |
| GCACTACCTCGCAAATCTGC+AGG | + | chr3.2:73819713-73819732 | MS.gene75564:CDS | 55.0% | |
| GCCAACTTTGCATCCAGCTC+AGG | - | chr3.2:73815671-73815690 | None:intergenic | 55.0% | |
| GCTTAAGGAGGTGAGGGTGA+GGG | + | chr3.2:73816790-73816809 | MS.gene75564:intron | 55.0% | |
| TCCCATCATCTTTCCCGCGT+TGG | + | chr3.2:73819460-73819479 | MS.gene75564:CDS | 55.0% | |
| ! | CACCTTTTGCAGGCAGGGTT+TGG | - | chr3.2:73816730-73816749 | None:intergenic | 55.0% |
| ! | TGGCGCATCGACCTTTCATC+AGG | + | chr3.2:73815807-73815826 | MS.gene75564:CDS | 55.0% |
| AGAGGAGGAGGAGCCTTCGA+TGG | + | chr3.2:73815586-73815605 | MS.gene75564:CDS | 60.0% | |
| GCCCTGACTGTTTCCTGACC+TGG | - | chr3.2:73817586-73817605 | None:intergenic | 60.0% | |
| GGCCACGAAGGATCCATCGA+AGG | - | chr3.2:73815602-73815621 | None:intergenic | 60.0% | |
| GTTAGCTGCCGACACACTCC+AGG | + | chr3.2:73817565-73817584 | MS.gene75564:intron | 60.0% | |
| CTGCCGACACACTCCAGGTC+AGG | + | chr3.2:73817570-73817589 | MS.gene75564:intron | 65.0% | |
| CAGCAGGGCGCGAAGCCACA+TGG | + | chr3.2:73819627-73819646 | MS.gene75564:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 73815041 | 73819739 | 73815041 | ID=MS.gene75564 |
| chr3.2 | mRNA | 73815041 | 73819739 | 73815041 | ID=MS.gene75564.t1;Parent=MS.gene75564 |
| chr3.2 | exon | 73815041 | 73816249 | 73815041 | ID=MS.gene75564.t1.exon1;Parent=MS.gene75564.t1 |
| chr3.2 | CDS | 73815041 | 73816249 | 73815041 | ID=cds.MS.gene75564.t1;Parent=MS.gene75564.t1 |
| chr3.2 | exon | 73819383 | 73819739 | 73819383 | ID=MS.gene75564.t1.exon2;Parent=MS.gene75564.t1 |
| chr3.2 | CDS | 73819383 | 73819739 | 73819383 | ID=cds.MS.gene75564.t1;Parent=MS.gene75564.t1 |
| Gene Sequence |
| Protein sequence |
