Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73245.t1 | XP_013454915.1 | 99.4 | 160 | 1 | 0 | 1 | 160 | 434 | 593 | 1.90E-82 | 315.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73245.t1 | Q9M331 | 60.8 | 148 | 55 | 2 | 1 | 145 | 437 | 584 | 1.6e-45 | 183.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73245.t1 | A0A072UIQ6 | 99.4 | 160 | 1 | 0 | 1 | 160 | 434 | 593 | 1.4e-82 | 315.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene73245 | 0.840448 | 8.64E-58 | -1.69E-46 |
| MS.gene049368 | MS.gene73245 | 0.829931 | 3.91E-55 | -1.69E-46 |
| MS.gene049499 | MS.gene73245 | 0.837673 | 4.52E-57 | -1.69E-46 |
| MS.gene049786 | MS.gene73245 | 0.823606 | 1.27E-53 | -1.69E-46 |
| MS.gene049801 | MS.gene73245 | 0.806049 | 9.93E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene73245 | 0.857521 | 1.54E-62 | -1.69E-46 |
| MS.gene04998 | MS.gene73245 | 0.805077 | 1.59E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene73245 | 0.8143 | 1.65E-51 | -1.69E-46 |
| MS.gene050414 | MS.gene73245 | 0.808114 | 3.63E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene73245 | 0.80539 | 1.37E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene73245 | 0.846063 | 2.75E-59 | -1.69E-46 |
| MS.gene050657 | MS.gene73245 | 0.835286 | 1.83E-56 | -1.69E-46 |
| MS.gene050737 | MS.gene73245 | 0.809974 | 1.45E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene73245 | 0.829849 | 4.09E-55 | -1.69E-46 |
| MS.gene051184 | MS.gene73245 | 0.839325 | 1.70E-57 | -1.69E-46 |
| MS.gene051490 | MS.gene73245 | 0.823731 | 1.18E-53 | -1.69E-46 |
| MS.gene051541 | MS.gene73245 | 0.838742 | 2.40E-57 | -1.69E-46 |
| MS.gene051831 | MS.gene73245 | 0.8095 | 1.84E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene73245 | 0.835053 | 2.10E-56 | -1.69E-46 |
| MS.gene052016 | MS.gene73245 | 0.809912 | 1.50E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene73245 | 0.812508 | 4.09E-51 | -1.69E-46 |
| MS.gene052118 | MS.gene73245 | 0.80972 | 1.65E-50 | -1.69E-46 |
| MS.gene05224 | MS.gene73245 | 0.805254 | 1.46E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene73245 | 0.812421 | 4.28E-51 | -1.69E-46 |
| MS.gene052342 | MS.gene73245 | 0.810698 | 1.01E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene73245 | 0.809251 | 2.07E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene73245 | 0.856925 | 2.31E-62 | -1.69E-46 |
| MS.gene052493 | MS.gene73245 | 0.819527 | 1.11E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene73245 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene052518 | MS.gene73245 | 0.809501 | 1.83E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene73245 | 0.808107 | 3.64E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene73245 | 0.807711 | 4.42E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene73245 | 0.804268 | 2.34E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene73245 | 0.807413 | 5.12E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene73245 | 0.819505 | 1.12E-52 | -1.69E-46 |
| MS.gene053298 | MS.gene73245 | 0.810368 | 1.19E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene73245 | 0.809999 | 1.43E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene73245 | 0.815939 | 7.15E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene73245 | 0.810623 | 1.05E-50 | -1.69E-46 |
| MS.gene054489 | MS.gene73245 | 0.807952 | 3.93E-50 | -1.69E-46 |
| MS.gene05454 | MS.gene73245 | 0.805087 | 1.58E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene73245 | 0.808806 | 2.58E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene73245 | 0.846398 | 2.23E-59 | -1.69E-46 |
| MS.gene054641 | MS.gene73245 | 0.819601 | 1.07E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene73245 | 0.827191 | 1.79E-54 | -1.69E-46 |
| MS.gene054893 | MS.gene73245 | 0.826163 | 3.15E-54 | -1.69E-46 |
| MS.gene055141 | MS.gene73245 | 0.824671 | 7.12E-54 | -1.69E-46 |
| MS.gene055313 | MS.gene73245 | 0.801751 | 7.77E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene73245 | 0.835577 | 1.55E-56 | -1.69E-46 |
| MS.gene05552 | MS.gene73245 | 0.802938 | 4.42E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene73245 | 0.864334 | 1.31E-64 | -1.69E-46 |
| MS.gene055926 | MS.gene73245 | 0.81239 | 4.34E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene73245 | 0.81762 | 3.00E-52 | -1.69E-46 |
| MS.gene056538 | MS.gene73245 | 0.813552 | 2.42E-51 | -1.69E-46 |
| MS.gene056638 | MS.gene73245 | 0.813692 | 2.25E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene73245 | 0.805218 | 1.48E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene73245 | 0.812168 | 4.86E-51 | -1.69E-46 |
| MS.gene05690 | MS.gene73245 | 0.805999 | 1.02E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene73245 | 0.803924 | 2.76E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene73245 | 0.822503 | 2.29E-53 | -1.69E-46 |
| MS.gene058159 | MS.gene73245 | 0.819441 | 1.16E-52 | -1.69E-46 |
| MS.gene058289 | MS.gene73245 | 0.80998 | 1.45E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene73245 | 0.858021 | 1.10E-62 | -1.69E-46 |
| MS.gene058758 | MS.gene73245 | 0.807997 | 3.84E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene73245 | 0.874108 | 8.74E-68 | -1.69E-46 |
| MS.gene059283 | MS.gene73245 | 0.81029 | 1.24E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene73245 | 0.809258 | 2.07E-50 | -1.69E-46 |
| MS.gene059774 | MS.gene73245 | 0.818536 | 1.86E-52 | -1.69E-46 |
| MS.gene059952 | MS.gene73245 | 0.802518 | 5.40E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene73245 | 0.8065 | 7.98E-50 | -1.69E-46 |
| MS.gene06010 | MS.gene73245 | 0.806066 | 9.85E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene73245 | 0.833546 | 5.01E-56 | -1.69E-46 |
| MS.gene060380 | MS.gene73245 | 0.811362 | 7.27E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene73245 | 0.813904 | 2.02E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene73245 | 0.834015 | 3.83E-56 | -1.69E-46 |
| MS.gene060697 | MS.gene73245 | 0.818813 | 1.61E-52 | -1.69E-46 |
| MS.gene060785 | MS.gene73245 | 0.814685 | 1.36E-51 | -1.69E-46 |
| MS.gene060869 | MS.gene73245 | 0.805076 | 1.59E-49 | -1.69E-46 |
| MS.gene060870 | MS.gene73245 | 0.810783 | 9.71E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene73245 | 0.870268 | 1.66E-66 | -1.69E-46 |
| MS.gene060933 | MS.gene73245 | 0.803308 | 3.71E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene73245 | 0.818213 | 2.20E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene73245 | 0.838171 | 3.37E-57 | -1.69E-46 |
| MS.gene061205 | MS.gene73245 | 0.802554 | 5.31E-49 | -1.69E-46 |
| MS.gene06121 | MS.gene73245 | 0.824831 | 6.52E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73245.t1 | MTR_4g019580 | 99.375 | 160 | 1 | 0 | 1 | 160 | 434 | 593 | 9.17e-110 | 324 |
| MS.gene73245.t1 | MTR_7g065080 | 72.050 | 161 | 38 | 2 | 1 | 160 | 342 | 496 | 3.41e-76 | 235 |
| MS.gene73245.t1 | MTR_7g065080 | 72.050 | 161 | 38 | 2 | 1 | 160 | 429 | 583 | 2.17e-75 | 235 |
| MS.gene73245.t1 | MTR_3g069440 | 63.291 | 158 | 53 | 2 | 1 | 154 | 429 | 585 | 1.80e-61 | 199 |
| MS.gene73245.t1 | MTR_3g069500 | 61.688 | 154 | 50 | 3 | 1 | 153 | 431 | 576 | 5.97e-58 | 190 |
| MS.gene73245.t1 | MTR_3g069420 | 56.688 | 157 | 63 | 2 | 1 | 153 | 430 | 585 | 2.92e-56 | 186 |
| MS.gene73245.t1 | MTR_4g033325 | 45.070 | 142 | 73 | 2 | 1 | 137 | 285 | 426 | 6.37e-40 | 139 |
| MS.gene73245.t1 | MTR_4g033325 | 45.070 | 142 | 73 | 2 | 1 | 137 | 311 | 452 | 1.02e-39 | 139 |
| MS.gene73245.t1 | MTR_4g033325 | 45.070 | 142 | 73 | 2 | 1 | 137 | 409 | 550 | 2.75e-39 | 139 |
| MS.gene73245.t1 | MTR_8g038880 | 37.888 | 161 | 89 | 2 | 1 | 157 | 411 | 564 | 2.97e-39 | 139 |
| MS.gene73245.t1 | MTR_0294s0020 | 42.254 | 142 | 77 | 2 | 1 | 137 | 409 | 550 | 9.82e-38 | 135 |
| MS.gene73245.t1 | MTR_4g033385 | 41.549 | 142 | 78 | 2 | 1 | 137 | 312 | 453 | 1.01e-37 | 134 |
| MS.gene73245.t1 | MTR_4g033310 | 41.727 | 139 | 76 | 2 | 4 | 137 | 350 | 488 | 3.29e-37 | 133 |
| MS.gene73245.t1 | MTR_4g033315 | 41.727 | 139 | 76 | 2 | 4 | 137 | 414 | 552 | 6.59e-37 | 133 |
| MS.gene73245.t1 | MTR_4g033310 | 41.727 | 139 | 76 | 2 | 4 | 137 | 414 | 552 | 6.59e-37 | 133 |
| MS.gene73245.t1 | MTR_6g008690 | 44.366 | 142 | 74 | 2 | 1 | 137 | 396 | 537 | 1.73e-36 | 132 |
| MS.gene73245.t1 | MTR_3g005010 | 45.270 | 148 | 70 | 3 | 1 | 140 | 403 | 547 | 2.79e-36 | 131 |
| MS.gene73245.t1 | MTR_3g014790 | 41.958 | 143 | 77 | 2 | 1 | 137 | 406 | 548 | 4.31e-34 | 125 |
| MS.gene73245.t1 | MTR_4g033330 | 42.276 | 123 | 66 | 2 | 1 | 118 | 411 | 533 | 3.36e-33 | 122 |
| MS.gene73245.t1 | MTR_7g067010 | 40.278 | 144 | 83 | 2 | 1 | 141 | 423 | 566 | 4.72e-32 | 120 |
| MS.gene73245.t1 | MTR_4g015080 | 40.559 | 143 | 82 | 2 | 1 | 140 | 433 | 575 | 1.81e-31 | 118 |
| MS.gene73245.t1 | MTR_3g462710 | 40.000 | 140 | 81 | 2 | 1 | 137 | 316 | 455 | 9.33e-31 | 115 |
| MS.gene73245.t1 | MTR_3g462710 | 39.716 | 141 | 82 | 2 | 1 | 138 | 425 | 565 | 1.90e-30 | 115 |
| MS.gene73245.t1 | MTR_3g072300 | 39.286 | 140 | 81 | 2 | 7 | 142 | 428 | 567 | 2.20e-29 | 112 |
| MS.gene73245.t1 | MTR_5g085850 | 38.621 | 145 | 82 | 2 | 1 | 145 | 428 | 565 | 2.81e-29 | 112 |
| MS.gene73245.t1 | MTR_5g038060 | 42.029 | 138 | 78 | 2 | 1 | 136 | 440 | 577 | 7.88e-29 | 111 |
| MS.gene73245.t1 | MTR_8g469480 | 40.141 | 142 | 83 | 2 | 1 | 140 | 447 | 588 | 1.05e-28 | 110 |
| MS.gene73245.t1 | MTR_4g107530 | 39.333 | 150 | 84 | 3 | 1 | 143 | 439 | 588 | 1.93e-28 | 110 |
| MS.gene73245.t1 | MTR_5g012270 | 37.589 | 141 | 83 | 2 | 1 | 137 | 434 | 573 | 2.00e-28 | 110 |
| MS.gene73245.t1 | MTR_5g012290 | 38.194 | 144 | 78 | 3 | 1 | 137 | 432 | 571 | 4.47e-28 | 108 |
| MS.gene73245.t1 | MTR_4g107510 | 36.552 | 145 | 85 | 3 | 1 | 138 | 442 | 586 | 9.54e-28 | 108 |
| MS.gene73245.t1 | MTR_7g098220 | 35.862 | 145 | 89 | 2 | 1 | 141 | 429 | 573 | 1.30e-26 | 104 |
| MS.gene73245.t1 | MTR_7g098220 | 35.862 | 145 | 89 | 2 | 1 | 141 | 385 | 529 | 1.39e-26 | 104 |
| MS.gene73245.t1 | MTR_7g098160 | 35.616 | 146 | 89 | 3 | 1 | 141 | 432 | 577 | 1.56e-26 | 104 |
| MS.gene73245.t1 | MTR_7g098230 | 39.007 | 141 | 82 | 2 | 1 | 137 | 425 | 565 | 1.85e-26 | 104 |
| MS.gene73245.t1 | MTR_7g098040 | 38.129 | 139 | 82 | 2 | 1 | 135 | 433 | 571 | 2.83e-26 | 103 |
| MS.gene73245.t1 | MTR_4g101380 | 38.732 | 142 | 80 | 3 | 1 | 137 | 435 | 574 | 2.84e-26 | 103 |
| MS.gene73245.t1 | MTR_7g051880 | 42.537 | 134 | 71 | 2 | 1 | 133 | 397 | 525 | 2.88e-26 | 103 |
| MS.gene73245.t1 | MTR_4g107580 | 37.584 | 149 | 86 | 3 | 1 | 142 | 431 | 579 | 5.69e-26 | 103 |
| MS.gene73245.t1 | MTR_4g033390 | 44.828 | 87 | 47 | 1 | 52 | 137 | 30 | 116 | 6.09e-26 | 95.9 |
| MS.gene73245.t1 | MTR_8g469470 | 38.849 | 139 | 83 | 2 | 1 | 137 | 444 | 582 | 1.94e-25 | 101 |
| MS.gene73245.t1 | MTR_7g098090 | 34.532 | 139 | 87 | 2 | 1 | 135 | 437 | 575 | 2.29e-25 | 101 |
| MS.gene73245.t1 | MTR_1g042310 | 38.571 | 140 | 82 | 2 | 1 | 136 | 381 | 520 | 4.49e-25 | 100 |
| MS.gene73245.t1 | MTR_1g042310 | 38.571 | 140 | 82 | 2 | 1 | 136 | 388 | 527 | 4.60e-25 | 100 |
| MS.gene73245.t1 | MTR_1g042310 | 38.571 | 140 | 82 | 2 | 1 | 136 | 425 | 564 | 5.28e-25 | 100 |
| MS.gene73245.t1 | MTR_7g098200 | 37.589 | 141 | 84 | 2 | 1 | 137 | 314 | 454 | 6.91e-25 | 99.8 |
| MS.gene73245.t1 | MTR_1g075440 | 36.429 | 140 | 85 | 2 | 1 | 136 | 427 | 566 | 8.19e-25 | 99.8 |
| MS.gene73245.t1 | MTR_7g098200 | 37.589 | 141 | 84 | 2 | 1 | 137 | 418 | 558 | 9.74e-25 | 99.8 |
| MS.gene73245.t1 | MTR_7g098200 | 37.589 | 141 | 84 | 2 | 1 | 137 | 428 | 568 | 1.01e-24 | 99.4 |
| MS.gene73245.t1 | MTR_7g052600 | 40.299 | 134 | 74 | 2 | 1 | 133 | 397 | 525 | 1.50e-24 | 99.0 |
| MS.gene73245.t1 | MTR_7g098180 | 33.540 | 161 | 103 | 3 | 1 | 157 | 431 | 591 | 2.19e-24 | 98.6 |
| MS.gene73245.t1 | MTR_7g051830 | 40.299 | 134 | 74 | 2 | 1 | 133 | 397 | 525 | 3.04e-24 | 98.2 |
| MS.gene73245.t1 | MTR_1g041815 | 36.496 | 137 | 83 | 2 | 4 | 136 | 428 | 564 | 4.85e-24 | 97.4 |
| MS.gene73245.t1 | MTR_7g098210 | 36.957 | 138 | 83 | 2 | 4 | 137 | 306 | 443 | 5.29e-24 | 97.1 |
| MS.gene73245.t1 | MTR_5g055000 | 35.664 | 143 | 86 | 4 | 3 | 139 | 421 | 563 | 5.61e-24 | 97.4 |
| MS.gene73245.t1 | MTR_7g111260 | 38.621 | 145 | 82 | 3 | 1 | 141 | 410 | 551 | 8.29e-24 | 97.1 |
| MS.gene73245.t1 | MTR_5g038380 | 35.211 | 142 | 90 | 2 | 1 | 140 | 437 | 578 | 9.46e-24 | 96.7 |
| MS.gene73245.t1 | MTR_3g112460 | 37.241 | 145 | 83 | 3 | 1 | 145 | 422 | 558 | 9.63e-24 | 96.7 |
| MS.gene73245.t1 | MTR_3g112470 | 37.241 | 145 | 83 | 3 | 1 | 145 | 422 | 558 | 1.20e-23 | 96.3 |
| MS.gene73245.t1 | MTR_3g112450 | 38.562 | 153 | 74 | 4 | 1 | 152 | 423 | 556 | 1.22e-23 | 96.3 |
| MS.gene73245.t1 | MTR_1g041835 | 35.252 | 139 | 86 | 2 | 2 | 136 | 426 | 564 | 1.27e-23 | 96.3 |
| MS.gene73245.t1 | MTR_1g041885 | 41.880 | 117 | 63 | 2 | 1 | 116 | 381 | 493 | 1.39e-23 | 96.3 |
| MS.gene73245.t1 | MTR_5g014150 | 35.211 | 142 | 87 | 3 | 1 | 139 | 450 | 589 | 2.25e-23 | 95.5 |
| MS.gene73245.t1 | MTR_8g469310 | 34.694 | 147 | 90 | 3 | 1 | 141 | 430 | 576 | 9.69e-23 | 94.0 |
| MS.gene73245.t1 | MTR_4g107670 | 34.932 | 146 | 90 | 3 | 1 | 141 | 431 | 576 | 1.11e-22 | 93.6 |
| MS.gene73245.t1 | MTR_4g024930 | 33.582 | 134 | 87 | 2 | 1 | 133 | 420 | 552 | 1.20e-22 | 93.6 |
| MS.gene73245.t1 | MTR_1g041875 | 40.171 | 117 | 65 | 2 | 1 | 116 | 428 | 540 | 1.49e-22 | 93.2 |
| MS.gene73245.t1 | MTR_7g088825 | 36.111 | 144 | 86 | 3 | 2 | 140 | 427 | 569 | 1.84e-22 | 93.2 |
| MS.gene73245.t1 | MTR_5g038190 | 33.813 | 139 | 90 | 2 | 1 | 137 | 431 | 569 | 1.86e-22 | 93.2 |
| MS.gene73245.t1 | MTR_2g101650 | 34.014 | 147 | 86 | 6 | 1 | 139 | 426 | 569 | 2.39e-22 | 92.8 |
| MS.gene73245.t1 | MTR_2g101640 | 31.013 | 158 | 104 | 3 | 1 | 153 | 425 | 582 | 2.83e-22 | 92.4 |
| MS.gene73245.t1 | MTR_8g103233 | 31.724 | 145 | 93 | 3 | 2 | 140 | 417 | 561 | 4.20e-22 | 92.0 |
| MS.gene73245.t1 | MTR_1g085090 | 34.483 | 145 | 88 | 3 | 1 | 141 | 410 | 551 | 1.00e-21 | 90.9 |
| MS.gene73245.t1 | MTR_4g107610 | 40.000 | 135 | 78 | 3 | 1 | 133 | 436 | 569 | 1.64e-21 | 90.5 |
| MS.gene73245.t1 | MTR_7g088790 | 33.333 | 156 | 96 | 2 | 2 | 153 | 434 | 585 | 1.76e-21 | 90.1 |
| MS.gene73245.t1 | MTR_4g123537 | 36.170 | 141 | 83 | 3 | 1 | 137 | 434 | 571 | 2.50e-21 | 89.7 |
| MS.gene73245.t1 | MTR_2g101560 | 27.848 | 158 | 109 | 3 | 1 | 153 | 429 | 586 | 2.64e-21 | 89.7 |
| MS.gene73245.t1 | MTR_2g101610 | 31.159 | 138 | 90 | 2 | 1 | 133 | 429 | 566 | 3.24e-21 | 89.4 |
| MS.gene73245.t1 | MTR_1g116930 | 31.690 | 142 | 94 | 2 | 1 | 141 | 423 | 562 | 3.29e-21 | 89.4 |
| MS.gene73245.t1 | MTR_2g101590 | 31.159 | 138 | 90 | 2 | 1 | 133 | 428 | 565 | 3.71e-21 | 89.4 |
| MS.gene73245.t1 | MTR_4g114340 | 32.639 | 144 | 95 | 2 | 1 | 142 | 422 | 565 | 3.85e-21 | 89.4 |
| MS.gene73245.t1 | MTR_1g057460 | 32.824 | 131 | 83 | 2 | 4 | 133 | 438 | 564 | 9.02e-21 | 88.2 |
| MS.gene73245.t1 | MTR_2g093640 | 33.333 | 138 | 82 | 2 | 1 | 138 | 422 | 549 | 9.74e-21 | 88.2 |
| MS.gene73245.t1 | MTR_4g011280 | 31.126 | 151 | 98 | 4 | 1 | 145 | 432 | 582 | 9.99e-21 | 88.2 |
| MS.gene73245.t1 | MTR_1g057460 | 32.824 | 131 | 83 | 2 | 4 | 133 | 367 | 493 | 1.28e-20 | 87.8 |
| MS.gene73245.t1 | MTR_7g010820 | 36.646 | 161 | 84 | 4 | 1 | 143 | 429 | 589 | 1.37e-20 | 87.8 |
| MS.gene73245.t1 | MTR_4g033375 | 45.238 | 84 | 42 | 1 | 1 | 80 | 413 | 496 | 1.51e-20 | 87.4 |
| MS.gene73245.t1 | MTR_2g093160 | 33.333 | 138 | 83 | 3 | 1 | 138 | 421 | 549 | 1.68e-20 | 87.4 |
| MS.gene73245.t1 | MTR_4g098800 | 32.026 | 153 | 98 | 3 | 1 | 152 | 442 | 589 | 1.99e-20 | 87.4 |
| MS.gene73245.t1 | MTR_7g013270 | 32.000 | 150 | 98 | 3 | 1 | 148 | 492 | 639 | 2.33e-20 | 87.0 |
| MS.gene73245.t1 | MTR_4g098800 | 32.026 | 153 | 98 | 3 | 1 | 152 | 507 | 654 | 2.48e-20 | 87.0 |
| MS.gene73245.t1 | MTR_0236s0050 | 32.090 | 134 | 86 | 2 | 1 | 133 | 364 | 493 | 3.52e-20 | 86.3 |
| MS.gene73245.t1 | MTR_4g033395 | 45.238 | 84 | 42 | 1 | 1 | 80 | 413 | 496 | 4.81e-20 | 85.9 |
| MS.gene73245.t1 | MTR_2g093180 | 33.333 | 138 | 82 | 3 | 1 | 138 | 423 | 550 | 8.97e-20 | 85.5 |
| MS.gene73245.t1 | MTR_2g017750 | 29.412 | 153 | 100 | 2 | 1 | 145 | 445 | 597 | 1.32e-19 | 84.7 |
| MS.gene73245.t1 | MTR_2g005130 | 35.000 | 140 | 82 | 4 | 1 | 136 | 429 | 563 | 1.45e-19 | 84.7 |
| MS.gene73245.t1 | MTR_7g005930 | 30.519 | 154 | 102 | 4 | 1 | 153 | 435 | 584 | 1.47e-19 | 84.7 |
| MS.gene73245.t1 | MTR_7g006540 | 30.282 | 142 | 91 | 2 | 4 | 137 | 472 | 613 | 2.02e-19 | 84.3 |
| MS.gene73245.t1 | MTR_7g088820 | 29.371 | 143 | 97 | 1 | 2 | 140 | 320 | 462 | 8.40e-19 | 82.4 |
| MS.gene73245.t1 | MTR_7g088820 | 29.371 | 143 | 97 | 1 | 2 | 140 | 430 | 572 | 8.99e-19 | 82.4 |
| MS.gene73245.t1 | MTR_7g088820 | 29.371 | 143 | 97 | 1 | 2 | 140 | 368 | 510 | 1.04e-18 | 82.4 |
| MS.gene73245.t1 | MTR_1g009200 | 31.618 | 136 | 90 | 2 | 21 | 155 | 451 | 584 | 7.08e-18 | 80.1 |
| MS.gene73245.t1 | MTR_7g064780 | 31.013 | 158 | 101 | 5 | 1 | 153 | 434 | 588 | 5.58e-17 | 77.4 |
| MS.gene73245.t1 | MTR_1g026740 | 32.593 | 135 | 84 | 3 | 5 | 133 | 420 | 553 | 6.52e-17 | 77.0 |
| MS.gene73245.t1 | MTR_1g026750 | 32.090 | 134 | 86 | 2 | 5 | 133 | 421 | 554 | 1.71e-16 | 75.9 |
| MS.gene73245.t1 | MTR_1g026770 | 33.088 | 136 | 82 | 3 | 5 | 133 | 417 | 550 | 5.32e-16 | 74.7 |
| MS.gene73245.t1 | MTR_8g087810 | 33.103 | 145 | 88 | 2 | 1 | 136 | 431 | 575 | 1.74e-15 | 73.2 |
| MS.gene73245.t1 | MTR_3g100980 | 34.211 | 152 | 92 | 4 | 1 | 148 | 415 | 562 | 7.05e-15 | 71.2 |
| MS.gene73245.t1 | MTR_8g087780 | 32.414 | 145 | 89 | 2 | 1 | 136 | 430 | 574 | 7.23e-15 | 71.2 |
| MS.gene73245.t1 | MTR_3g100980 | 35.099 | 151 | 92 | 3 | 1 | 148 | 443 | 590 | 7.54e-15 | 71.2 |
| MS.gene73245.t1 | MTR_7g064800 | 30.128 | 156 | 100 | 4 | 1 | 154 | 436 | 584 | 4.86e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73245.t1 | AT3G53960 | 60.265 | 151 | 57 | 2 | 1 | 148 | 437 | 587 | 1.68e-57 | 189 |
| MS.gene73245.t1 | AT2G37900 | 62.857 | 140 | 46 | 2 | 1 | 139 | 356 | 490 | 1.45e-53 | 176 |
| MS.gene73245.t1 | AT2G37900 | 62.857 | 140 | 46 | 2 | 1 | 139 | 435 | 569 | 4.87e-53 | 177 |
| MS.gene73245.t1 | AT1G72140 | 45.775 | 142 | 72 | 2 | 1 | 137 | 412 | 553 | 1.84e-39 | 140 |
| MS.gene73245.t1 | AT1G22540 | 45.890 | 146 | 74 | 2 | 1 | 141 | 412 | 557 | 2.35e-39 | 140 |
| MS.gene73245.t1 | AT1G22550 | 44.828 | 145 | 75 | 2 | 1 | 140 | 419 | 563 | 4.79e-37 | 134 |
| MS.gene73245.t1 | AT1G72130 | 46.324 | 136 | 69 | 2 | 1 | 135 | 282 | 414 | 2.04e-36 | 130 |
| MS.gene73245.t1 | AT1G72130 | 46.324 | 136 | 69 | 2 | 1 | 135 | 282 | 414 | 2.04e-36 | 130 |
| MS.gene73245.t1 | AT1G72130 | 45.652 | 138 | 71 | 2 | 1 | 137 | 400 | 534 | 9.83e-36 | 130 |
| MS.gene73245.t1 | AT5G14940 | 39.286 | 140 | 82 | 2 | 1 | 137 | 403 | 542 | 1.05e-33 | 124 |
| MS.gene73245.t1 | AT1G72125 | 44.755 | 143 | 74 | 2 | 1 | 138 | 416 | 558 | 1.81e-33 | 124 |
| MS.gene73245.t1 | AT3G54450 | 35.862 | 145 | 89 | 1 | 1 | 141 | 403 | 547 | 2.68e-33 | 123 |
| MS.gene73245.t1 | AT1G72120 | 44.755 | 143 | 74 | 2 | 1 | 138 | 412 | 554 | 2.20e-32 | 120 |
| MS.gene73245.t1 | AT2G40460 | 44.444 | 135 | 69 | 3 | 8 | 137 | 423 | 556 | 1.20e-31 | 119 |
| MS.gene73245.t1 | AT3G01350 | 37.589 | 141 | 81 | 3 | 8 | 141 | 416 | 556 | 2.74e-30 | 115 |
| MS.gene73245.t1 | AT1G69860 | 40.714 | 140 | 78 | 1 | 1 | 140 | 419 | 553 | 3.16e-30 | 115 |
| MS.gene73245.t1 | AT1G22570 | 42.857 | 147 | 72 | 3 | 1 | 140 | 386 | 527 | 1.21e-29 | 113 |
| MS.gene73245.t1 | AT1G22570 | 42.857 | 147 | 72 | 3 | 1 | 140 | 423 | 564 | 1.50e-29 | 113 |
| MS.gene73245.t1 | AT3G54140 | 39.568 | 139 | 81 | 2 | 1 | 136 | 425 | 563 | 1.71e-29 | 112 |
| MS.gene73245.t1 | AT3G54140 | 39.568 | 139 | 81 | 2 | 1 | 136 | 425 | 563 | 1.71e-29 | 112 |
| MS.gene73245.t1 | AT5G01180 | 36.301 | 146 | 90 | 2 | 1 | 143 | 425 | 570 | 2.51e-29 | 112 |
| MS.gene73245.t1 | AT5G01180 | 36.301 | 146 | 90 | 2 | 1 | 143 | 425 | 570 | 2.51e-29 | 112 |
| MS.gene73245.t1 | AT5G01180 | 36.301 | 146 | 90 | 2 | 1 | 143 | 425 | 570 | 2.51e-29 | 112 |
| MS.gene73245.t1 | AT1G18880 | 42.466 | 146 | 76 | 2 | 1 | 138 | 423 | 568 | 1.20e-28 | 110 |
| MS.gene73245.t1 | AT1G12110 | 39.130 | 138 | 82 | 2 | 1 | 137 | 434 | 570 | 1.46e-27 | 107 |
| MS.gene73245.t1 | AT3G21670 | 42.975 | 121 | 65 | 2 | 26 | 145 | 451 | 568 | 1.47e-27 | 107 |
| MS.gene73245.t1 | AT1G27040 | 39.568 | 139 | 80 | 2 | 1 | 135 | 390 | 528 | 3.85e-27 | 106 |
| MS.gene73245.t1 | AT1G27040 | 39.568 | 139 | 80 | 2 | 1 | 135 | 422 | 560 | 3.90e-27 | 106 |
| MS.gene73245.t1 | AT1G27040 | 39.568 | 139 | 80 | 2 | 1 | 135 | 418 | 556 | 4.26e-27 | 106 |
| MS.gene73245.t1 | AT1G32450 | 36.025 | 161 | 95 | 3 | 1 | 153 | 446 | 606 | 3.58e-26 | 103 |
| MS.gene73245.t1 | AT2G02040 | 37.500 | 144 | 86 | 2 | 1 | 140 | 442 | 585 | 3.64e-25 | 100 |
| MS.gene73245.t1 | AT1G33440 | 35.294 | 170 | 93 | 5 | 1 | 158 | 434 | 598 | 7.63e-25 | 100 |
| MS.gene73245.t1 | AT2G26690 | 38.931 | 131 | 78 | 2 | 1 | 130 | 390 | 519 | 8.36e-25 | 99.8 |
| MS.gene73245.t1 | AT2G26690 | 38.931 | 131 | 78 | 2 | 1 | 130 | 378 | 507 | 8.69e-25 | 99.8 |
| MS.gene73245.t1 | AT2G26690 | 38.931 | 131 | 78 | 2 | 1 | 130 | 423 | 552 | 1.18e-24 | 99.4 |
| MS.gene73245.t1 | AT5G46050 | 39.837 | 123 | 64 | 2 | 1 | 116 | 313 | 432 | 1.15e-23 | 96.3 |
| MS.gene73245.t1 | AT1G68570 | 36.111 | 144 | 86 | 4 | 2 | 139 | 398 | 541 | 1.35e-23 | 96.3 |
| MS.gene73245.t1 | AT1G68570 | 36.111 | 144 | 86 | 4 | 2 | 139 | 428 | 571 | 1.41e-23 | 96.3 |
| MS.gene73245.t1 | AT5G46050 | 39.837 | 123 | 64 | 2 | 1 | 116 | 425 | 544 | 2.09e-23 | 95.9 |
| MS.gene73245.t1 | AT1G69850 | 36.364 | 143 | 86 | 3 | 1 | 138 | 439 | 581 | 2.92e-23 | 95.5 |
| MS.gene73245.t1 | AT5G62680 | 33.775 | 151 | 92 | 3 | 1 | 143 | 449 | 599 | 8.77e-23 | 94.0 |
| MS.gene73245.t1 | AT1G62200 | 35.556 | 135 | 81 | 2 | 4 | 137 | 459 | 588 | 1.01e-22 | 94.0 |
| MS.gene73245.t1 | AT1G62200 | 35.556 | 135 | 81 | 2 | 4 | 137 | 488 | 617 | 1.04e-22 | 94.0 |
| MS.gene73245.t1 | AT1G62200 | 35.556 | 135 | 81 | 2 | 4 | 137 | 502 | 631 | 1.13e-22 | 93.6 |
| MS.gene73245.t1 | AT3G25260 | 37.594 | 133 | 74 | 2 | 1 | 133 | 392 | 515 | 1.17e-22 | 93.6 |
| MS.gene73245.t1 | AT5G28470 | 36.232 | 138 | 86 | 2 | 1 | 137 | 421 | 557 | 1.69e-22 | 93.2 |
| MS.gene73245.t1 | AT5G28470 | 36.232 | 138 | 86 | 2 | 1 | 137 | 419 | 555 | 1.73e-22 | 93.2 |
| MS.gene73245.t1 | AT1G59740 | 39.735 | 151 | 80 | 6 | 1 | 145 | 443 | 588 | 1.91e-22 | 93.2 |
| MS.gene73245.t1 | AT3G25280 | 37.313 | 134 | 79 | 2 | 1 | 133 | 392 | 521 | 2.02e-22 | 92.8 |
| MS.gene73245.t1 | AT1G69870 | 33.333 | 138 | 90 | 2 | 1 | 136 | 457 | 594 | 2.41e-22 | 92.8 |
| MS.gene73245.t1 | AT1G27080 | 37.681 | 138 | 78 | 3 | 1 | 136 | 375 | 506 | 3.40e-22 | 92.4 |
| MS.gene73245.t1 | AT1G27080 | 37.681 | 138 | 78 | 3 | 1 | 136 | 417 | 548 | 3.83e-22 | 92.0 |
| MS.gene73245.t1 | AT5G19640 | 31.447 | 159 | 96 | 3 | 1 | 157 | 449 | 596 | 4.36e-22 | 92.0 |
| MS.gene73245.t1 | AT3G47960 | 31.944 | 144 | 90 | 3 | 1 | 136 | 465 | 608 | 7.66e-22 | 91.3 |
| MS.gene73245.t1 | AT2G02020 | 35.915 | 142 | 85 | 3 | 1 | 138 | 385 | 524 | 7.74e-22 | 91.3 |
| MS.gene73245.t1 | AT2G02020 | 36.691 | 139 | 82 | 3 | 4 | 138 | 409 | 545 | 8.22e-22 | 91.3 |
| MS.gene73245.t1 | AT5G46040 | 34.307 | 137 | 86 | 2 | 4 | 136 | 428 | 564 | 2.48e-21 | 89.7 |
| MS.gene73245.t1 | AT3G45680 | 34.752 | 141 | 82 | 2 | 1 | 141 | 417 | 547 | 2.21e-20 | 87.0 |
| MS.gene73245.t1 | AT3G45650 | 34.028 | 144 | 87 | 2 | 1 | 141 | 410 | 548 | 4.89e-20 | 86.3 |
| MS.gene73245.t1 | AT3G45660 | 34.266 | 143 | 86 | 2 | 1 | 140 | 409 | 546 | 6.41e-20 | 85.9 |
| MS.gene73245.t1 | AT3G45660 | 34.266 | 143 | 86 | 2 | 1 | 140 | 409 | 546 | 6.41e-20 | 85.9 |
| MS.gene73245.t1 | AT3G45660 | 34.266 | 143 | 86 | 2 | 1 | 140 | 430 | 567 | 7.95e-20 | 85.5 |
| MS.gene73245.t1 | AT5G13400 | 34.188 | 117 | 76 | 1 | 26 | 141 | 500 | 616 | 9.84e-20 | 85.5 |
| MS.gene73245.t1 | AT3G45720 | 31.757 | 148 | 91 | 2 | 1 | 148 | 415 | 552 | 1.37e-19 | 84.7 |
| MS.gene73245.t1 | AT5G62730 | 31.544 | 149 | 92 | 3 | 1 | 139 | 440 | 588 | 4.29e-19 | 83.6 |
| MS.gene73245.t1 | AT1G52190 | 30.435 | 138 | 91 | 3 | 1 | 133 | 429 | 566 | 4.81e-19 | 83.2 |
| MS.gene73245.t1 | AT5G62730 | 31.544 | 149 | 92 | 3 | 1 | 139 | 381 | 529 | 5.23e-19 | 83.2 |
| MS.gene73245.t1 | AT3G45710 | 31.206 | 141 | 88 | 2 | 1 | 141 | 418 | 549 | 5.77e-19 | 83.2 |
| MS.gene73245.t1 | AT3G16180 | 30.201 | 149 | 98 | 2 | 1 | 143 | 429 | 577 | 1.02e-18 | 82.4 |
| MS.gene73245.t1 | AT4G21680 | 35.252 | 139 | 86 | 2 | 1 | 135 | 434 | 572 | 3.36e-18 | 80.9 |
| MS.gene73245.t1 | AT2G38100 | 31.250 | 144 | 95 | 3 | 3 | 145 | 356 | 496 | 1.99e-17 | 78.6 |
| MS.gene73245.t1 | AT2G38100 | 31.250 | 144 | 95 | 3 | 3 | 145 | 372 | 512 | 2.33e-17 | 78.6 |
| MS.gene73245.t1 | AT2G38100 | 31.250 | 144 | 95 | 3 | 3 | 145 | 378 | 518 | 2.33e-17 | 78.6 |
| MS.gene73245.t1 | AT3G45700 | 32.624 | 141 | 85 | 2 | 1 | 141 | 407 | 537 | 5.11e-17 | 77.4 |
| MS.gene73245.t1 | AT3G45650 | 30.000 | 170 | 85 | 4 | 1 | 141 | 410 | 574 | 3.00e-15 | 72.4 |
| MS.gene73245.t1 | AT5G11570 | 34.259 | 108 | 68 | 1 | 26 | 133 | 372 | 476 | 2.73e-14 | 69.7 |
Find 29 sgRNAs with CRISPR-Local
Find 32 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCCACAGTTTCTAATTAT+TGG | 0.194463 | 4.1:+78651500 | MS.gene73245:CDS |
| CCCAAGCTTCTCATTGAATC+AGG | 0.322169 | 4.1:-78651578 | None:intergenic |
| CAGTTTCTAATTATTGGTTT+TGG | 0.332505 | 4.1:+78651506 | MS.gene73245:CDS |
| GGACTTTACCTTAGTGTGAT+TGG | 0.337959 | 4.1:+78651605 | MS.gene73245:CDS |
| CAAGTAAAAGTGGGAAAAGT+TGG | 0.354008 | 4.1:+78651678 | MS.gene73245:CDS |
| AACAATGATAGTAGCAGCTT+TGG | 0.355709 | 4.1:+78651403 | None:intergenic |
| TCAATGAGAAGCTTGGGAAT+TGG | 0.382984 | 4.1:+78651584 | MS.gene73245:CDS |
| GGATAAATTCTATTGGCTAT+TGG | 0.394391 | 4.1:+78651730 | MS.gene73245:CDS |
| GTCGTTTGGATAAATTCTAT+TGG | 0.405585 | 4.1:+78651723 | MS.gene73245:CDS |
| GGCGACGGTTTGGCGCTTGT+TGG | 0.415317 | 4.1:+78651527 | MS.gene73245:CDS |
| AGATTTGAATAGTAGTCGTT+TGG | 0.415547 | 4.1:+78651709 | MS.gene73245:CDS |
| AAGAGTGATGATGGTGGAGC+AGG | 0.423866 | 4.1:+78651854 | MS.gene73245:CDS |
| CCTGATTCAATGAGAAGCTT+GGG | 0.425140 | 4.1:+78651578 | MS.gene73245:CDS |
| TCCTGATTCAATGAGAAGCT+TGG | 0.453595 | 4.1:+78651577 | MS.gene73245:CDS |
| GTTGTGGCTGATTGTTATGA+TGG | 0.464657 | 4.1:+78651830 | MS.gene73245:CDS |
| TTCTCATTGAATCAGGAACT+TGG | 0.466633 | 4.1:-78651571 | None:intergenic |
| AGAGTGATGATGGTGGAGCA+GGG | 0.483075 | 4.1:+78651855 | MS.gene73245:CDS |
| AAAAGTGGGAAAAGTTGGTT+TGG | 0.487631 | 4.1:+78651683 | MS.gene73245:CDS |
| TGTTTGTGCTCTTTGCTCAA+AGG | 0.493787 | 4.1:+78651780 | MS.gene73245:CDS |
| TGATGGTGGAGCAGGGAGAA+TGG | 0.527014 | 4.1:+78651862 | MS.gene73245:CDS |
| TATGATGGAAAGAGTGATGA+TGG | 0.563538 | 4.1:+78651845 | MS.gene73245:CDS |
| GATCATGTGACAAGTAAAAG+TGG | 0.565545 | 4.1:+78651668 | MS.gene73245:CDS |
| TTGCAGCTCCAATCACACTA+AGG | 0.574865 | 4.1:-78651613 | None:intergenic |
| ATCATGTGACAAGTAAAAGT+GGG | 0.599655 | 4.1:+78651669 | MS.gene73245:CDS |
| ATTGAAAGTGAACCATGCGA+TGG | 0.617576 | 4.1:-78651461 | None:intergenic |
| GTTGAGATGAATCCATCGCA+TGG | 0.627639 | 4.1:+78651449 | MS.gene73245:CDS |
| GAATGTGCAAAATAATGTTG+TGG | 0.653044 | 4.1:+78651814 | MS.gene73245:CDS |
| AAACCAATAATTAGAAACTG+TGG | 0.668309 | 4.1:-78651503 | None:intergenic |
| GATGGAAAGAGTGATGATGG+TGG | 0.680847 | 4.1:+78651848 | MS.gene73245:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAACCAATAATTAGAAACTG+TGG | - | chr4.1:78651506-78651525 | None:intergenic | 25.0% |
| !!! | CAGTTTCTAATTATTGGTTT+TGG | + | chr4.1:78651506-78651525 | MS.gene73245:CDS | 25.0% |
| AGATTTGAATAGTAGTCGTT+TGG | + | chr4.1:78651709-78651728 | MS.gene73245:CDS | 30.0% | |
| ATCATGTGACAAGTAAAAGT+GGG | + | chr4.1:78651669-78651688 | MS.gene73245:CDS | 30.0% | |
| GAATGTGCAAAATAATGTTG+TGG | + | chr4.1:78651814-78651833 | MS.gene73245:CDS | 30.0% | |
| GTCGTTTGGATAAATTCTAT+TGG | + | chr4.1:78651723-78651742 | MS.gene73245:CDS | 30.0% | |
| ! | GGATAAATTCTATTGGCTAT+TGG | + | chr4.1:78651730-78651749 | MS.gene73245:CDS | 30.0% |
| !!! | CACTTTCAATGAGTGTTTTT+TGG | + | chr4.1:78651474-78651493 | MS.gene73245:CDS | 30.0% |
| CAAGTAAAAGTGGGAAAAGT+TGG | + | chr4.1:78651678-78651697 | MS.gene73245:CDS | 35.0% | |
| GATCATGTGACAAGTAAAAG+TGG | + | chr4.1:78651668-78651687 | MS.gene73245:CDS | 35.0% | |
| TTCTCATTGAATCAGGAACT+TGG | - | chr4.1:78651574-78651593 | None:intergenic | 35.0% | |
| ! | AAAAGTGGGAAAAGTTGGTT+TGG | + | chr4.1:78651683-78651702 | MS.gene73245:CDS | 35.0% |
| ! | TATGATGGAAAGAGTGATGA+TGG | + | chr4.1:78651845-78651864 | MS.gene73245:CDS | 35.0% |
| !!! | CTAATTATTGGTTTTGGCGA+CGG | + | chr4.1:78651512-78651531 | MS.gene73245:CDS | 35.0% |
| ATTGAAAGTGAACCATGCGA+TGG | - | chr4.1:78651464-78651483 | None:intergenic | 40.0% | |
| CCTGATTCAATGAGAAGCTT+GGG | + | chr4.1:78651578-78651597 | MS.gene73245:CDS | 40.0% | |
| GCGCCACAGTTTCTAATTAT+TGG | + | chr4.1:78651500-78651519 | MS.gene73245:CDS | 40.0% | |
| GGACTTTACCTTAGTGTGAT+TGG | + | chr4.1:78651605-78651624 | MS.gene73245:CDS | 40.0% | |
| GTTGTGGCTGATTGTTATGA+TGG | + | chr4.1:78651830-78651849 | MS.gene73245:CDS | 40.0% | |
| TCAATGAGAAGCTTGGGAAT+TGG | + | chr4.1:78651584-78651603 | MS.gene73245:CDS | 40.0% | |
| TCCTGATTCAATGAGAAGCT+TGG | + | chr4.1:78651577-78651596 | MS.gene73245:CDS | 40.0% | |
| TGTTTGTGCTCTTTGCTCAA+AGG | + | chr4.1:78651780-78651799 | MS.gene73245:CDS | 40.0% | |
| ! | CAGCTTTGGTCGAGAAAAAA+AGG | + | chr4.1:78651417-78651436 | MS.gene73245:CDS | 40.0% |
| CCCAAGCTTCTCATTGAATC+AGG | - | chr4.1:78651581-78651600 | None:intergenic | 45.0% | |
| GTTGAGATGAATCCATCGCA+TGG | + | chr4.1:78651449-78651468 | MS.gene73245:CDS | 45.0% | |
| TTGCAGCTCCAATCACACTA+AGG | - | chr4.1:78651616-78651635 | None:intergenic | 45.0% | |
| !! | GATGGAAAGAGTGATGATGG+TGG | + | chr4.1:78651848-78651867 | MS.gene73245:CDS | 45.0% |
| !!! | TATTGGTTTTGGCGACGGTT+TGG | + | chr4.1:78651517-78651536 | MS.gene73245:CDS | 45.0% |
| !! | AAGAGTGATGATGGTGGAGC+AGG | + | chr4.1:78651854-78651873 | MS.gene73245:CDS | 50.0% |
| !! | AGAGTGATGATGGTGGAGCA+GGG | + | chr4.1:78651855-78651874 | MS.gene73245:CDS | 50.0% |
| !! | TGATGGTGGAGCAGGGAGAA+TGG | + | chr4.1:78651862-78651881 | MS.gene73245:CDS | 55.0% |
| ! | GGCGACGGTTTGGCGCTTGT+TGG | + | chr4.1:78651527-78651546 | MS.gene73245:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 78651407 | 78651889 | 78651407 | ID=MS.gene73245 |
| chr4.1 | mRNA | 78651407 | 78651889 | 78651407 | ID=MS.gene73245.t1;Parent=MS.gene73245 |
| chr4.1 | exon | 78651407 | 78651889 | 78651407 | ID=MS.gene73245.t1.exon1;Parent=MS.gene73245.t1 |
| chr4.1 | CDS | 78651407 | 78651889 | 78651407 | ID=cds.MS.gene73245.t1;Parent=MS.gene73245.t1 |
| Gene Sequence |
| Protein sequence |
