Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062293.t1 | XP_003617537.1 | 100 | 153 | 0 | 0 | 1 | 153 | 1 | 153 | 5.10E-77 | 297 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062293.t1 | Q9SHE7 | 99.3 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 1.4e-78 | 293.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062293.t1 | G7K8J5 | 100.0 | 153 | 0 | 0 | 1 | 153 | 1 | 153 | 3.7e-77 | 297.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene031519 | MS.gene062293 | PPI |
MS.gene050946 | MS.gene062293 | PPI |
MS.gene031518 | MS.gene062293 | PPI |
MS.gene072546 | MS.gene062293 | PPI |
MS.gene062293 | MS.gene054412 | PPI |
MS.gene062293 | MS.gene96803 | PPI |
MS.gene050743 | MS.gene062293 | PPI |
MS.gene062293 | MS.gene96804 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062293.t1 | MTR_5g092700 | 100.000 | 153 | 0 | 0 | 1 | 153 | 1 | 153 | 6.59e-108 | 304 |
MS.gene062293.t1 | MTR_4g073580 | 100.000 | 153 | 0 | 0 | 1 | 153 | 1 | 153 | 6.59e-108 | 304 |
MS.gene062293.t1 | MTR_4g073580 | 83.607 | 183 | 0 | 1 | 1 | 153 | 1 | 183 | 1.42e-101 | 289 |
MS.gene062293.t1 | MTR_7g116360 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.41e-83 | 245 |
MS.gene062293.t1 | MTR_7g116360 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.41e-83 | 245 |
MS.gene062293.t1 | MTR_1g066390 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 2.75e-83 | 244 |
MS.gene062293.t1 | MTR_1g066390 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 2.75e-83 | 244 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 5.16e-83 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 5.16e-83 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 66.447 | 152 | 16 | 1 | 1 | 152 | 153 | 269 | 5.12e-57 | 179 |
MS.gene062293.t1 | MTR_7g116360 | 80.263 | 152 | 30 | 0 | 1 | 152 | 49 | 200 | 5.60e-83 | 245 |
MS.gene062293.t1 | MTR_7g116360 | 80.263 | 152 | 30 | 0 | 1 | 152 | 125 | 276 | 5.60e-83 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 5.72e-83 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 5.72e-83 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 92.391 | 92 | 7 | 0 | 1 | 92 | 153 | 244 | 2.01e-52 | 167 |
MS.gene062293.t1 | MTR_4g080920 | 79.605 | 152 | 31 | 0 | 1 | 152 | 1 | 152 | 1.01e-82 | 243 |
MS.gene062293.t1 | MTR_4g080920 | 75.000 | 152 | 38 | 0 | 1 | 152 | 77 | 228 | 9.35e-74 | 220 |
MS.gene062293.t1 | MTR_8g081020 | 80.392 | 153 | 30 | 0 | 1 | 153 | 229 | 381 | 1.54e-82 | 248 |
MS.gene062293.t1 | MTR_8g081020 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.53e-81 | 245 |
MS.gene062293.t1 | MTR_8g081020 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.53e-81 | 245 |
MS.gene062293.t1 | MTR_8g081020 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.53e-81 | 245 |
MS.gene062293.t1 | MTR_6g061930 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.72e-82 | 244 |
MS.gene062293.t1 | MTR_6g061930 | 75.000 | 152 | 23 | 1 | 1 | 152 | 77 | 213 | 3.33e-71 | 216 |
MS.gene062293.t1 | MTR_6g061930 | 69.079 | 152 | 32 | 1 | 1 | 152 | 153 | 289 | 5.47e-66 | 202 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.72e-82 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.72e-82 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.72e-82 | 245 |
MS.gene062293.t1 | MTR_4g091580 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.24e-81 | 245 |
MS.gene062293.t1 | MTR_4g091580 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.53e-81 | 245 |
MS.gene062293.t1 | MTR_4g091580 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.53e-81 | 245 |
MS.gene062293.t1 | MTR_4g091580 | 79.605 | 152 | 31 | 0 | 1 | 152 | 229 | 380 | 4.49e-81 | 244 |
MS.gene062293.t1 | MTR_4g080797 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.65e-81 | 245 |
MS.gene062293.t1 | MTR_4g080797 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.65e-81 | 245 |
MS.gene062293.t1 | MTR_4g080797 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.65e-81 | 245 |
MS.gene062293.t1 | MTR_4g080797 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 1.65e-81 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.65e-81 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.65e-81 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.65e-81 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 1.65e-81 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.82e-81 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.82e-81 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.82e-81 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 1.82e-81 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.18e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.18e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.18e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 1.18e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 305 | 456 | 1.18e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.18e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.18e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.18e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 1.18e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 305 | 456 | 1.18e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 8.15e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 8.15e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 8.15e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 8.15e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 305 | 456 | 8.15e-80 | 245 |
MS.gene062293.t1 | MTR_8g018230 | 80.263 | 152 | 30 | 0 | 1 | 152 | 381 | 532 | 8.15e-80 | 245 |
MS.gene062293.t1 | MTR_4g091580 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 8.60e-80 | 245 |
MS.gene062293.t1 | MTR_4g091580 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 8.60e-80 | 245 |
MS.gene062293.t1 | MTR_4g091580 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 8.60e-80 | 245 |
MS.gene062293.t1 | MTR_4g091580 | 80.263 | 152 | 30 | 0 | 1 | 152 | 381 | 532 | 8.60e-80 | 245 |
MS.gene062293.t1 | MTR_4g091580 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 3.67e-79 | 243 |
MS.gene062293.t1 | MTR_4g091580 | 78.947 | 152 | 32 | 0 | 1 | 152 | 305 | 456 | 3.58e-78 | 241 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 8.98e-80 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 8.98e-80 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 8.98e-80 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 8.98e-80 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 305 | 456 | 8.98e-80 | 245 |
MS.gene062293.t1 | MTR_4g081010 | 80.263 | 152 | 30 | 0 | 1 | 152 | 381 | 532 | 8.98e-80 | 245 |
MS.gene062293.t1 | MTR_4g088495 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 2.31e-77 | 245 |
MS.gene062293.t1 | MTR_4g088495 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 2.31e-77 | 245 |
MS.gene062293.t1 | MTR_4g088495 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 2.31e-77 | 245 |
MS.gene062293.t1 | MTR_4g088495 | 80.263 | 152 | 30 | 0 | 1 | 152 | 305 | 456 | 2.31e-77 | 245 |
MS.gene062293.t1 | MTR_4g088495 | 80.263 | 152 | 30 | 0 | 1 | 152 | 381 | 532 | 2.31e-77 | 245 |
MS.gene062293.t1 | MTR_4g088495 | 80.263 | 152 | 30 | 0 | 1 | 152 | 457 | 608 | 2.31e-77 | 245 |
MS.gene062293.t1 | MTR_4g088495 | 80.263 | 152 | 30 | 0 | 1 | 152 | 533 | 684 | 2.31e-77 | 245 |
MS.gene062293.t1 | MTR_4g088495 | 80.263 | 152 | 30 | 0 | 1 | 152 | 609 | 760 | 2.31e-77 | 245 |
MS.gene062293.t1 | MTR_4g088495 | 80.263 | 152 | 30 | 0 | 1 | 152 | 685 | 836 | 2.31e-77 | 245 |
MS.gene062293.t1 | MTR_4g088495 | 79.605 | 152 | 31 | 0 | 1 | 152 | 1 | 152 | 3.98e-76 | 242 |
MS.gene062293.t1 | MTR_4g088485 | 76.974 | 152 | 20 | 1 | 1 | 152 | 1 | 137 | 4.44e-74 | 221 |
MS.gene062293.t1 | MTR_4g088485 | 70.395 | 152 | 30 | 1 | 1 | 152 | 77 | 213 | 9.45e-69 | 207 |
MS.gene062293.t1 | MTR_8g479250 | 72.789 | 147 | 29 | 1 | 1 | 147 | 141 | 276 | 2.82e-58 | 183 |
MS.gene062293.t1 | MTR_8g479250 | 69.091 | 110 | 34 | 0 | 43 | 152 | 107 | 216 | 1.27e-41 | 140 |
MS.gene062293.t1 | MTR_8g479250 | 48.026 | 152 | 67 | 4 | 1 | 152 | 1 | 140 | 9.81e-29 | 107 |
MS.gene062293.t1 | MTR_8g479250 | 76.389 | 72 | 6 | 1 | 1 | 72 | 217 | 277 | 2.16e-26 | 101 |
MS.gene062293.t1 | MTR_3g092130 | 97.436 | 78 | 2 | 0 | 1 | 78 | 1 | 78 | 6.30e-50 | 157 |
MS.gene062293.t1 | MTR_3g092130 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 1.49e-26 | 97.8 |
MS.gene062293.t1 | MTR_7g105080 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.12e-49 | 155 |
MS.gene062293.t1 | MTR_7g105080 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 2.20e-26 | 96.7 |
MS.gene062293.t1 | MTR_3g092130 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.12e-49 | 155 |
MS.gene062293.t1 | MTR_3g092130 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 2.20e-26 | 96.7 |
MS.gene062293.t1 | MTR_1g059690 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.12e-49 | 155 |
MS.gene062293.t1 | MTR_1g059690 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 2.20e-26 | 96.7 |
MS.gene062293.t1 | MTR_8g088060 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.30e-49 | 155 |
MS.gene062293.t1 | MTR_8g088060 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 3.96e-26 | 97.1 |
MS.gene062293.t1 | MTR_5g033960 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.72e-49 | 155 |
MS.gene062293.t1 | MTR_5g033960 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 3.87e-26 | 97.1 |
MS.gene062293.t1 | MTR_1g046640 | 71.053 | 76 | 22 | 0 | 1 | 76 | 240 | 315 | 1.23e-28 | 107 |
MS.gene062293.t1 | MTR_1g046640 | 44.595 | 74 | 41 | 0 | 79 | 152 | 242 | 315 | 1.07e-13 | 67.0 |
MS.gene062293.t1 | MTR_5g076810 | 68.831 | 77 | 23 | 1 | 1 | 76 | 194 | 270 | 1.23e-27 | 103 |
MS.gene062293.t1 | MTR_5g076810 | 48.000 | 75 | 38 | 1 | 79 | 152 | 196 | 270 | 1.50e-14 | 68.9 |
MS.gene062293.t1 | MTR_5g076660 | 69.863 | 73 | 22 | 0 | 1 | 73 | 266 | 338 | 1.42e-27 | 105 |
MS.gene062293.t1 | MTR_5g076660 | 49.275 | 69 | 35 | 0 | 79 | 147 | 268 | 336 | 1.58e-13 | 67.0 |
MS.gene062293.t1 | MTR_5g061310 | 60.000 | 75 | 30 | 0 | 1 | 75 | 2 | 76 | 2.75e-25 | 92.4 |
MS.gene062293.t1 | MTR_5g061310 | 41.892 | 74 | 43 | 0 | 78 | 151 | 3 | 76 | 8.45e-14 | 63.2 |
MS.gene062293.t1 | MTR_5g067400 | 68.421 | 76 | 24 | 0 | 1 | 76 | 241 | 316 | 5.97e-25 | 97.8 |
MS.gene062293.t1 | MTR_5g067400 | 47.297 | 74 | 39 | 0 | 79 | 152 | 243 | 316 | 1.03e-12 | 64.3 |
MS.gene062293.t1 | MTR_5g076370 | 64.384 | 73 | 26 | 0 | 1 | 73 | 267 | 339 | 1.63e-23 | 94.4 |
MS.gene062293.t1 | MTR_2g038430 | 61.333 | 75 | 29 | 0 | 1 | 75 | 268 | 342 | 1.85e-22 | 91.3 |
MS.gene062293.t1 | MTR_5g076505 | 61.333 | 75 | 29 | 0 | 1 | 75 | 240 | 314 | 2.00e-22 | 90.9 |
MS.gene062293.t1 | MTR_5g076720 | 65.333 | 75 | 26 | 0 | 1 | 75 | 315 | 389 | 2.26e-22 | 91.7 |
MS.gene062293.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 171 | 246 | 2.95e-22 | 89.4 |
MS.gene062293.t1 | MTR_1g046650 | 40.541 | 74 | 44 | 0 | 79 | 152 | 173 | 246 | 9.19e-12 | 61.2 |
MS.gene062293.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 240 | 315 | 5.45e-22 | 89.7 |
MS.gene062293.t1 | MTR_1g046650 | 40.541 | 74 | 44 | 0 | 79 | 152 | 242 | 315 | 1.18e-11 | 61.2 |
MS.gene062293.t1 | MTR_2g038420 | 60.000 | 75 | 30 | 0 | 1 | 75 | 260 | 334 | 6.31e-22 | 89.7 |
MS.gene062293.t1 | MTR_5g076740 | 59.211 | 76 | 30 | 1 | 1 | 75 | 86 | 161 | 7.55e-22 | 86.3 |
MS.gene062293.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 240 | 315 | 7.59e-22 | 89.4 |
MS.gene062293.t1 | MTR_1g046650 | 40.541 | 74 | 44 | 0 | 79 | 152 | 242 | 315 | 1.55e-11 | 61.2 |
MS.gene062293.t1 | MTR_1g046650 | 57.895 | 76 | 32 | 0 | 1 | 76 | 271 | 346 | 1.16e-21 | 89.4 |
MS.gene062293.t1 | MTR_1g046650 | 40.541 | 74 | 44 | 0 | 79 | 152 | 273 | 346 | 1.83e-11 | 60.8 |
MS.gene062293.t1 | MTR_7g094390 | 58.667 | 75 | 31 | 0 | 1 | 75 | 402 | 476 | 6.16e-21 | 88.2 |
MS.gene062293.t1 | MTR_7g094390 | 43.243 | 74 | 42 | 0 | 78 | 151 | 403 | 476 | 7.30e-12 | 62.4 |
MS.gene062293.t1 | MTR_5g076520 | 57.333 | 75 | 31 | 1 | 1 | 74 | 244 | 318 | 1.79e-19 | 83.2 |
MS.gene062293.t1 | MTR_7g024290 | 60.526 | 76 | 29 | 1 | 1 | 75 | 241 | 316 | 1.46e-18 | 80.5 |
MS.gene062293.t1 | MTR_5g061290 | 53.333 | 75 | 35 | 0 | 1 | 75 | 252 | 326 | 9.55e-18 | 78.6 |
MS.gene062293.t1 | MTR_4g009980 | 55.224 | 67 | 30 | 0 | 9 | 75 | 4 | 70 | 1.48e-17 | 72.4 |
MS.gene062293.t1 | MTR_4g080783 | 72.917 | 48 | 13 | 0 | 44 | 91 | 7 | 54 | 4.33e-16 | 69.3 |
MS.gene062293.t1 | MTR_3g091400 | 31.250 | 144 | 96 | 3 | 7 | 147 | 32 | 175 | 4.86e-16 | 74.3 |
MS.gene062293.t1 | MTR_5g076350 | 48.684 | 76 | 38 | 1 | 1 | 75 | 8 | 83 | 1.59e-15 | 67.8 |
MS.gene062293.t1 | MTR_5g076780 | 56.452 | 62 | 27 | 0 | 13 | 74 | 2 | 63 | 5.79e-15 | 65.9 |
MS.gene062293.t1 | MTR_5g076760 | 58.621 | 58 | 24 | 0 | 10 | 67 | 4 | 61 | 6.02e-15 | 66.2 |
MS.gene062293.t1 | MTR_5g076340 | 50.649 | 77 | 36 | 2 | 1 | 75 | 9 | 85 | 8.59e-15 | 65.9 |
MS.gene062293.t1 | MTR_7g117395 | 34.074 | 135 | 83 | 4 | 1 | 130 | 37 | 170 | 9.18e-15 | 70.9 |
MS.gene062293.t1 | MTR_8g027610 | 34.437 | 151 | 87 | 6 | 3 | 145 | 38 | 184 | 9.27e-15 | 70.9 |
MS.gene062293.t1 | MTR_8g099565 | 30.882 | 136 | 91 | 3 | 15 | 147 | 40 | 175 | 6.07e-13 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062293.t1 | AT1G31340 | 99.342 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 3.98e-106 | 300 |
MS.gene062293.t1 | AT2G35635 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 3.98e-105 | 297 |
MS.gene062293.t1 | AT2G35635 | 60.526 | 76 | 30 | 0 | 3 | 78 | 79 | 154 | 4.12e-25 | 94.4 |
MS.gene062293.t1 | AT4G05050 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.45e-84 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.45e-84 | 245 |
MS.gene062293.t1 | AT4G05050 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.47e-83 | 245 |
MS.gene062293.t1 | AT4G05050 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.47e-83 | 245 |
MS.gene062293.t1 | AT4G05050 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.47e-83 | 245 |
MS.gene062293.t1 | AT4G05050 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.47e-83 | 245 |
MS.gene062293.t1 | AT4G05050 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.47e-83 | 245 |
MS.gene062293.t1 | AT4G05050 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.47e-83 | 245 |
MS.gene062293.t1 | AT4G02890 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.47e-83 | 245 |
MS.gene062293.t1 | AT4G02890 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.47e-83 | 245 |
MS.gene062293.t1 | AT4G02890 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.47e-83 | 245 |
MS.gene062293.t1 | AT4G02890 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.47e-83 | 245 |
MS.gene062293.t1 | AT5G03240 | 79.739 | 153 | 31 | 0 | 1 | 153 | 153 | 305 | 1.09e-82 | 246 |
MS.gene062293.t1 | AT5G03240 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.60e-82 | 245 |
MS.gene062293.t1 | AT5G03240 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.60e-82 | 245 |
MS.gene062293.t1 | AT5G03240 | 79.739 | 153 | 31 | 0 | 1 | 153 | 153 | 305 | 1.09e-82 | 246 |
MS.gene062293.t1 | AT5G03240 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.60e-82 | 245 |
MS.gene062293.t1 | AT5G03240 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.60e-82 | 245 |
MS.gene062293.t1 | AT5G03240 | 79.739 | 153 | 31 | 0 | 1 | 153 | 153 | 305 | 1.09e-82 | 246 |
MS.gene062293.t1 | AT5G03240 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.60e-82 | 245 |
MS.gene062293.t1 | AT5G03240 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.60e-82 | 245 |
MS.gene062293.t1 | AT5G20620 | 79.739 | 153 | 31 | 0 | 1 | 153 | 153 | 305 | 1.09e-82 | 246 |
MS.gene062293.t1 | AT5G20620 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.60e-82 | 245 |
MS.gene062293.t1 | AT5G20620 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.60e-82 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G02890 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G02890 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G02890 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G02890 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G02890 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT4G02890 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.58e-82 | 245 |
MS.gene062293.t1 | AT5G20620 | 79.739 | 153 | 31 | 0 | 1 | 153 | 229 | 381 | 1.18e-81 | 246 |
MS.gene062293.t1 | AT5G20620 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.72e-81 | 245 |
MS.gene062293.t1 | AT5G20620 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.72e-81 | 245 |
MS.gene062293.t1 | AT5G20620 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.72e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 1.73e-81 | 245 |
MS.gene062293.t1 | AT1G55060 | 77.778 | 153 | 34 | 0 | 1 | 153 | 77 | 229 | 4.71e-81 | 239 |
MS.gene062293.t1 | AT1G55060 | 73.684 | 152 | 40 | 0 | 1 | 152 | 1 | 152 | 4.70e-77 | 229 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.24e-80 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.24e-80 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.24e-80 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 1.24e-80 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 305 | 456 | 1.24e-80 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 1 | 152 | 1.24e-80 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 77 | 228 | 1.24e-80 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 153 | 304 | 1.24e-80 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 229 | 380 | 1.24e-80 | 245 |
MS.gene062293.t1 | AT4G05320 | 80.263 | 152 | 30 | 0 | 1 | 152 | 305 | 456 | 1.24e-80 | 245 |
MS.gene062293.t1 | AT1G65350 | 79.605 | 152 | 30 | 1 | 1 | 152 | 1 | 151 | 1.99e-79 | 238 |
MS.gene062293.t1 | AT1G65350 | 78.947 | 152 | 31 | 1 | 1 | 152 | 77 | 227 | 2.04e-78 | 235 |
MS.gene062293.t1 | AT1G65350 | 70.659 | 167 | 35 | 1 | 1 | 153 | 152 | 318 | 1.26e-74 | 226 |
MS.gene062293.t1 | AT5G37640 | 76.316 | 152 | 36 | 0 | 1 | 152 | 79 | 230 | 1.28e-78 | 236 |
MS.gene062293.t1 | AT5G37640 | 73.856 | 153 | 39 | 1 | 1 | 152 | 155 | 307 | 3.38e-72 | 219 |
MS.gene062293.t1 | AT5G37640 | 69.079 | 152 | 47 | 0 | 1 | 152 | 3 | 154 | 8.57e-69 | 211 |
MS.gene062293.t1 | AT3G09790 | 70.395 | 152 | 45 | 0 | 1 | 152 | 3 | 154 | 2.13e-66 | 213 |
MS.gene062293.t1 | AT3G09790 | 64.557 | 158 | 49 | 2 | 1 | 151 | 79 | 236 | 5.30e-59 | 193 |
MS.gene062293.t1 | AT3G09790 | 58.599 | 157 | 58 | 1 | 1 | 150 | 469 | 625 | 5.78e-49 | 166 |
MS.gene062293.t1 | AT3G09790 | 54.717 | 159 | 65 | 1 | 1 | 152 | 393 | 551 | 6.47e-49 | 166 |
MS.gene062293.t1 | AT3G09790 | 59.236 | 157 | 57 | 2 | 1 | 150 | 238 | 394 | 9.56e-49 | 166 |
MS.gene062293.t1 | AT3G09790 | 54.268 | 164 | 63 | 3 | 1 | 152 | 155 | 318 | 1.39e-46 | 160 |
MS.gene062293.t1 | AT3G09790 | 57.143 | 154 | 60 | 2 | 1 | 152 | 319 | 468 | 1.93e-46 | 159 |
MS.gene062293.t1 | AT3G09790 | 70.395 | 152 | 45 | 0 | 1 | 152 | 3 | 154 | 2.13e-66 | 213 |
MS.gene062293.t1 | AT3G09790 | 64.557 | 158 | 49 | 2 | 1 | 151 | 79 | 236 | 5.30e-59 | 193 |
MS.gene062293.t1 | AT3G09790 | 58.599 | 157 | 58 | 1 | 1 | 150 | 469 | 625 | 5.78e-49 | 166 |
MS.gene062293.t1 | AT3G09790 | 54.717 | 159 | 65 | 1 | 1 | 152 | 393 | 551 | 6.47e-49 | 166 |
MS.gene062293.t1 | AT3G09790 | 59.236 | 157 | 57 | 2 | 1 | 150 | 238 | 394 | 9.56e-49 | 166 |
MS.gene062293.t1 | AT3G09790 | 54.268 | 164 | 63 | 3 | 1 | 152 | 155 | 318 | 1.39e-46 | 160 |
MS.gene062293.t1 | AT3G09790 | 57.143 | 154 | 60 | 2 | 1 | 152 | 319 | 468 | 1.93e-46 | 159 |
MS.gene062293.t1 | AT3G52590 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.16e-49 | 155 |
MS.gene062293.t1 | AT3G52590 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 2.14e-26 | 97.1 |
MS.gene062293.t1 | AT2G36170 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.16e-49 | 155 |
MS.gene062293.t1 | AT2G36170 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 2.14e-26 | 97.1 |
MS.gene062293.t1 | AT2G47110 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.63e-49 | 155 |
MS.gene062293.t1 | AT2G47110 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 4.56e-26 | 97.1 |
MS.gene062293.t1 | AT2G47110 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.63e-49 | 155 |
MS.gene062293.t1 | AT2G47110 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 4.56e-26 | 97.1 |
MS.gene062293.t1 | AT1G23410 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.69e-49 | 155 |
MS.gene062293.t1 | AT1G23410 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 4.59e-26 | 97.1 |
MS.gene062293.t1 | AT3G62250 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.89e-49 | 155 |
MS.gene062293.t1 | AT3G62250 | 62.162 | 74 | 28 | 0 | 79 | 152 | 3 | 76 | 4.71e-26 | 97.1 |
MS.gene062293.t1 | AT1G11980 | 79.730 | 74 | 15 | 0 | 79 | 152 | 3 | 76 | 2.20e-36 | 120 |
MS.gene062293.t1 | AT1G11980 | 53.846 | 78 | 36 | 0 | 1 | 78 | 1 | 78 | 6.28e-24 | 89.0 |
MS.gene062293.t1 | AT1G53930 | 75.342 | 73 | 18 | 0 | 1 | 73 | 86 | 158 | 8.70e-33 | 114 |
MS.gene062293.t1 | AT1G53930 | 37.654 | 162 | 71 | 7 | 8 | 146 | 1 | 155 | 1.46e-20 | 82.8 |
MS.gene062293.t1 | AT1G53950 | 60.000 | 75 | 30 | 0 | 1 | 75 | 69 | 143 | 3.64e-25 | 94.4 |
MS.gene062293.t1 | AT1G53950 | 36.709 | 158 | 59 | 3 | 1 | 151 | 20 | 143 | 5.86e-17 | 73.2 |
MS.gene062293.t1 | AT2G46500 | 32.639 | 144 | 94 | 2 | 7 | 147 | 40 | 183 | 3.90e-18 | 80.1 |
MS.gene062293.t1 | AT2G46500 | 32.639 | 144 | 94 | 2 | 7 | 147 | 40 | 183 | 6.69e-18 | 79.7 |
MS.gene062293.t1 | AT2G46500 | 32.639 | 144 | 94 | 2 | 7 | 147 | 40 | 183 | 6.69e-18 | 79.7 |
MS.gene062293.t1 | AT5G24240 | 30.822 | 146 | 96 | 3 | 7 | 148 | 38 | 182 | 3.61e-14 | 68.9 |
MS.gene062293.t1 | AT5G24240 | 30.822 | 146 | 96 | 3 | 7 | 148 | 38 | 182 | 3.61e-14 | 68.9 |
MS.gene062293.t1 | AT1G53945 | 46.269 | 67 | 36 | 0 | 1 | 67 | 46 | 112 | 9.12e-13 | 61.6 |
MS.gene062293.t1 | AT4G12570 | 38.667 | 75 | 45 | 1 | 1 | 74 | 95 | 169 | 7.40e-12 | 62.4 |
MS.gene062293.t1 | AT5G42220 | 38.889 | 72 | 44 | 0 | 1 | 72 | 24 | 95 | 5.02e-11 | 60.1 |
MS.gene062293.t1 | AT5G42220 | 38.889 | 72 | 44 | 0 | 1 | 72 | 24 | 95 | 5.02e-11 | 60.1 |
Find 39 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCGAGGGTGATAGTCTTTC+CGG | 0.220251 | 5.1:+74016368 | None:intergenic |
ATTAAAGTCAAGACTTTAAC+TGG | 0.293945 | 5.1:-74015975 | MS.gene062293:CDS |
TCACTTGGTCCTCAGGCTTA+GGG | 0.312498 | 5.1:-74016009 | MS.gene062293:CDS |
TCACTTGGTGCTTGCATTGA+GGG | 0.346912 | 5.1:-74014172 | MS.gene062293:CDS |
ACCATCTTCCAACTGCTTAC+CGG | 0.352790 | 5.1:+74016073 | None:intergenic |
TTCACTTGGTCCTCAGGCTT+AGG | 0.355004 | 5.1:-74016010 | MS.gene062293:CDS |
AAAATCAACCTCTGCTGATC+AGG | 0.364887 | 5.1:+74016098 | None:intergenic |
CAACACTTCACTTGGTCCTC+AGG | 0.407005 | 5.1:-74016016 | MS.gene062293:CDS |
TAAAGTCTTGACTTTAATCA+TGG | 0.437158 | 5.1:+74015980 | None:intergenic |
TTCACTTGGTGCTTGCATTG+AGG | 0.449045 | 5.1:-74014173 | MS.gene062293:CDS |
ATCTTTGTGAAGACTTTGAC+CGG | 0.455554 | 5.1:-74016387 | MS.gene062293:CDS |
GCCGGTAAGCAGTTGGAAGA+TGG | 0.470986 | 5.1:-74016074 | MS.gene062293:CDS |
GGGTGGTTCTGTGCTTCACT+TGG | 0.473264 | 5.1:-74014187 | MS.gene062293:CDS |
GTTTCAAACCTCTGCTGCAC+AGG | 0.478534 | 5.1:+74015870 | None:intergenic |
CACTTGGTGCTTGCATTGAG+GGG | 0.485261 | 5.1:-74014171 | MS.gene062293:CDS |
TGCTGCAGGCTCATCTATGC+TGG | 0.492831 | 5.1:-74014255 | MS.gene062293:intron |
CAACGTCAAGGCCAAGATCC+AGG | 0.500226 | 5.1:-74016322 | MS.gene062293:intron |
GGGTAACCTAACCTGGATCT+TGG | 0.508327 | 5.1:+74016311 | None:intergenic |
TGCTGATTACAACATACAAA+AGG | 0.513784 | 5.1:-74016042 | MS.gene062293:CDS |
CACTTGGTCCTCAGGCTTAG+GGG | 0.517421 | 5.1:-74016008 | MS.gene062293:CDS |
TGATACTATTGATCGTATCA+AGG | 0.532559 | 5.1:-74015922 | MS.gene062293:CDS |
ATCAACCTCTGCTGATCAGG+AGG | 0.535548 | 5.1:+74016101 | None:intergenic |
CTTGGCCTTGACGTTGTCGA+TGG | 0.546175 | 5.1:+74016329 | None:intergenic |
TCAAACCTCTGCTGCACAGG+TGG | 0.550195 | 5.1:+74015873 | None:intergenic |
GTCGCTGCTCTCAACCTCGA+GGG | 0.560617 | 5.1:+74016353 | None:intergenic |
GCTAAAGAGTACAACATTGA+GGG | 0.566179 | 5.1:-74014207 | MS.gene062293:CDS |
AAAGGAATCAACACTTCACT+TGG | 0.569456 | 5.1:-74016024 | MS.gene062293:CDS |
AGCTAAAGAGTACAACATTG+AGG | 0.583787 | 5.1:-74014208 | MS.gene062293:CDS |
GTATTCCACCTGTGCAGCAG+AGG | 0.583967 | 5.1:-74015878 | MS.gene062293:intron |
ATACGATCAATAGTATCAGT+AGG | 0.588588 | 5.1:+74015927 | None:intergenic |
TTGGTGCTTGCATTGAGGGG+TGG | 0.618700 | 5.1:-74014168 | MS.gene062293:CDS |
TGTCGCTGCTCTCAACCTCG+AGG | 0.630730 | 5.1:+74016352 | None:intergenic |
TCAACCTCTGCTGATCAGGA+GGG | 0.642222 | 5.1:+74016102 | None:intergenic |
TGGTTCCTCCCCTAAGCCTG+AGG | 0.652355 | 5.1:+74016000 | None:intergenic |
CGACACCATCGACAACGTCA+AGG | 0.655064 | 5.1:-74016334 | MS.gene062293:CDS |
GTATCCCTCCTGATCAGCAG+AGG | 0.665628 | 5.1:-74016106 | MS.gene062293:CDS |
TTGGTCCTCAGGCTTAGGGG+AGG | 0.681416 | 5.1:-74016005 | MS.gene062293:CDS |
AAAGAGTACAACATTGAGGG+TGG | 0.697133 | 5.1:-74014204 | MS.gene062293:CDS |
CGGAAAGACTATCACCCTCG+AGG | 0.726420 | 5.1:-74016367 | MS.gene062293:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGATTTTTATTTATTTAGTT+AGG | - | chr5.1:74014840-74014859 | MS.gene062293:intron | 10.0% |
!!! | ATTTTTTTTCTTAATTCTTT+TGG | - | chr5.1:74016246-74016265 | MS.gene062293:intron | 10.0% |
!! | ACTTTCTAAATACTTAATTA+GGG | - | chr5.1:74014278-74014297 | MS.gene062293:intron | 15.0% |
!! | TACTTTCTAAATACTTAATT+AGG | - | chr5.1:74014277-74014296 | MS.gene062293:intron | 15.0% |
!! | TTGCTAATTAAAAATTCAAA+TGG | + | chr5.1:74014787-74014806 | None:intergenic | 15.0% |
!!! | ATCATTGATTTTATTAGTTA+GGG | - | chr5.1:74014310-74014329 | MS.gene062293:intron | 15.0% |
!!! | TTATTACTTTTTGTTTTGAA+TGG | + | chr5.1:74015837-74015856 | None:intergenic | 15.0% |
!! | ATTTAGAAAGTAGAAAAGAA+AGG | + | chr5.1:74014269-74014288 | None:intergenic | 20.0% |
!! | CAAATAATCTAAAGAATGTT+TGG | - | chr5.1:74014720-74014739 | MS.gene062293:intron | 20.0% |
!! | GATGCAAAACTAAATATAAT+TGG | + | chr5.1:74015350-74015369 | None:intergenic | 20.0% |
!! | TGATCAAAGAATAGTATATA+AGG | - | chr5.1:74015029-74015048 | MS.gene062293:intron | 20.0% |
!! | TTTAGAAAGTAGAAAAGAAA+GGG | + | chr5.1:74014268-74014287 | None:intergenic | 20.0% |
!! | TTTATTTATTTAGTTAGGCT+GGG | - | chr5.1:74014845-74014864 | MS.gene062293:intron | 20.0% |
!!! | GATCATTGATTTTATTAGTT+AGG | - | chr5.1:74014309-74014328 | MS.gene062293:intron | 20.0% |
!!! | TAACTATTTTTTTCACTTCA+CGG | - | chr5.1:74015003-74015022 | MS.gene062293:intron | 20.0% |
!!! | TTTTATTTATTTAGTTAGGC+TGG | - | chr5.1:74014844-74014863 | MS.gene062293:intron | 20.0% |
! | AGAGATTTATTTAGCTAGTT+TGG | - | chr5.1:74015626-74015645 | MS.gene062293:intron | 25.0% |
! | AGATAGTAAGAAGAAATACA+TGG | - | chr5.1:74015699-74015718 | MS.gene062293:intron | 25.0% |
! | ATAGTAAGAAGAAATACATG+GGG | - | chr5.1:74015701-74015720 | MS.gene062293:intron | 25.0% |
! | ATTAAAGTCAAGACTTTAAC+TGG | - | chr5.1:74014579-74014598 | MS.gene062293:intron | 25.0% |
! | CAAGTTACTGTTAATATGAT+AGG | - | chr5.1:74014804-74014823 | MS.gene062293:intron | 25.0% |
! | GATAGTAAGAAGAAATACAT+GGG | - | chr5.1:74015700-74015719 | MS.gene062293:intron | 25.0% |
! | GTCATTGATATATCTTATAC+AGG | - | chr5.1:74016037-74016056 | MS.gene062293:CDS | 25.0% |
! | TAAAGTCTTGACTTTAATCA+TGG | + | chr5.1:74014577-74014596 | None:intergenic | 25.0% |
! | TCTCATCTTAACAAAATCAT+AGG | + | chr5.1:74015682-74015701 | None:intergenic | 25.0% |
! | TTAGAAAGTAGAAAAGAAAG+GGG | + | chr5.1:74014267-74014286 | None:intergenic | 25.0% |
!! | AATTTTATACACCATCTTGA+GGG | + | chr5.1:74015231-74015250 | None:intergenic | 25.0% |
!! | TAATTTTATACACCATCTTG+AGG | + | chr5.1:74015232-74015251 | None:intergenic | 25.0% |
!!! | CTTTTATCTGGAATCATAAA+AGG | + | chr5.1:74015487-74015506 | None:intergenic | 25.0% |
AAACTAGTTCCTATGAATCT+GGG | - | chr5.1:74015179-74015198 | MS.gene062293:intron | 30.0% | |
AATATTCACCTTTATCCTCA+AGG | + | chr5.1:74015571-74015590 | None:intergenic | 30.0% | |
AGAATCACAAAATCAGTACT+AGG | + | chr5.1:74014388-74014407 | None:intergenic | 30.0% | |
AGATAAAAGAGAACAGTTGA+TGG | - | chr5.1:74015498-74015517 | MS.gene062293:intron | 30.0% | |
AGGTAGTATTTATGCAGATT+TGG | - | chr5.1:74015049-74015068 | MS.gene062293:intron | 30.0% | |
ATACGATCAATAGTATCAGT+AGG | + | chr5.1:74014630-74014649 | None:intergenic | 30.0% | |
CAATTAAATTATGCACCTTG+AGG | - | chr5.1:74015553-74015572 | MS.gene062293:intron | 30.0% | |
GAATCACAAAATCAGTACTA+GGG | + | chr5.1:74014387-74014406 | None:intergenic | 30.0% | |
GAGTTGGATTGCATATTTAT+TGG | - | chr5.1:74016067-74016086 | MS.gene062293:CDS | 30.0% | |
TAAACTAGTTCCTATGAATC+TGG | - | chr5.1:74015178-74015197 | MS.gene062293:intron | 30.0% | |
TAGAAAGTAGAAAAGAAAGG+GGG | + | chr5.1:74014266-74014285 | None:intergenic | 30.0% | |
TAGTAAGAAGAAATACATGG+GGG | - | chr5.1:74015702-74015721 | MS.gene062293:intron | 30.0% | |
TGAGGATAAAGGTGAATATT+GGG | - | chr5.1:74015571-74015590 | MS.gene062293:intron | 30.0% | |
TGATACTATTGATCGTATCA+AGG | - | chr5.1:74014632-74014651 | MS.gene062293:intron | 30.0% | |
TTATACAGGTATCATTGAGT+TGG | - | chr5.1:74016051-74016070 | MS.gene062293:CDS | 30.0% | |
TTGAGGATAAAGGTGAATAT+TGG | - | chr5.1:74015570-74015589 | MS.gene062293:intron | 30.0% | |
! | ACTAGGGTATTCTTATGTTA+GGG | + | chr5.1:74014371-74014390 | None:intergenic | 30.0% |
! | AGATTCATAGGAACTAGTTT+AGG | + | chr5.1:74015179-74015198 | None:intergenic | 30.0% |
! | ATCAACTGTTCTCTTTTATC+TGG | + | chr5.1:74015499-74015518 | None:intergenic | 30.0% |
! | ATTTTATACACCATCTTGAG+GGG | + | chr5.1:74015230-74015249 | None:intergenic | 30.0% |
! | GTTTGAGATAAGTGTTGTTA+AGG | - | chr5.1:74015740-74015759 | MS.gene062293:intron | 30.0% |
! | TAATGGTTATTCTGGATTAG+TGG | - | chr5.1:74015307-74015326 | MS.gene062293:intron | 30.0% |
! | TACTAGGGTATTCTTATGTT+AGG | + | chr5.1:74014372-74014391 | None:intergenic | 30.0% |
! | TGCTGATTACAACATACAAA+AGG | - | chr5.1:74014512-74014531 | MS.gene062293:intron | 30.0% |
! | TTTTATCGCTTGAATATCCA+GGG | - | chr5.1:74015938-74015957 | MS.gene062293:CDS | 30.0% |
!! | ACTGATTTTGTGATTCTAAC+TGG | - | chr5.1:74014391-74014410 | MS.gene062293:intron | 30.0% |
!! | ATTTTGGGTCTAGTAGAATT+GGG | - | chr5.1:74015903-74015922 | MS.gene062293:CDS | 30.0% |
!!! | TTTTTTTTTTAGGGCTCAGT+TGG | + | chr5.1:74015425-74015444 | None:intergenic | 30.0% |
AAAGGAATCAACACTTCACT+TGG | - | chr5.1:74014530-74014549 | MS.gene062293:intron | 35.0% | |
ATAAAGGTGAATATTGGGTG+GGG | - | chr5.1:74015576-74015595 | MS.gene062293:intron | 35.0% | |
ATCTTTGTGAAGACTTTGAC+CGG | - | chr5.1:74014167-74014186 | MS.gene062293:CDS | 35.0% | |
ATTATGCACCTTGAGGATAA+AGG | - | chr5.1:74015560-74015579 | MS.gene062293:intron | 35.0% | |
GAACGTGTTGAAGAAAAAGA+GGG | - | chr5.1:74014654-74014673 | MS.gene062293:intron | 35.0% | |
GATAAAGGTGAATATTGGGT+GGG | - | chr5.1:74015575-74015594 | MS.gene062293:intron | 35.0% | |
GCAAGTATGTTAGAGCAATA+AGG | - | chr5.1:74015087-74015106 | MS.gene062293:intron | 35.0% | |
GGCTATTGTAATGGTTATTC+TGG | - | chr5.1:74015299-74015318 | MS.gene062293:intron | 35.0% | |
GTTGCCTATGATTAAGAAGA+GGG | - | chr5.1:74015868-74015887 | MS.gene062293:intron | 35.0% | |
TCTGAACCAGTTTCTATCAT+AGG | - | chr5.1:74015995-74016014 | MS.gene062293:CDS | 35.0% | |
TGTACTCCTATGATAGAAAC+TGG | + | chr5.1:74016004-74016023 | None:intergenic | 35.0% | |
TGTTGCCTATGATTAAGAAG+AGG | - | chr5.1:74015867-74015886 | MS.gene062293:intron | 35.0% | |
TTCACTGAACAAAGCATGAA+TGG | - | chr5.1:74016213-74016232 | MS.gene062293:intron | 35.0% | |
! | AGACTCGCTCTTTTTAACAT+AGG | + | chr5.1:74014899-74014918 | None:intergenic | 35.0% |
! | AGCTAAAGAGTACAACATTG+AGG | - | chr5.1:74016346-74016365 | MS.gene062293:CDS | 35.0% |
! | CTTTTATCGCTTGAATATCC+AGG | - | chr5.1:74015937-74015956 | MS.gene062293:CDS | 35.0% |
! | GATAAGTGTTGTTAAGGAGT+TGG | - | chr5.1:74015746-74015765 | MS.gene062293:intron | 35.0% |
! | GATTTTGTGATTCTAACTGG+TGG | - | chr5.1:74014394-74014413 | MS.gene062293:intron | 35.0% |
! | GCTAAAGAGTACAACATTGA+GGG | - | chr5.1:74016347-74016366 | MS.gene062293:CDS | 35.0% |
! | GTTGTGGAATATGTGGTTTT+AGG | - | chr5.1:74014416-74014435 | MS.gene062293:intron | 35.0% |
! | TTTTTACACTCAACCTGAAC+TGG | - | chr5.1:74014964-74014983 | MS.gene062293:intron | 35.0% |
!! | CATTTTGGGTCTAGTAGAAT+TGG | - | chr5.1:74015902-74015921 | MS.gene062293:CDS | 35.0% |
!!! | GAATATGTGGTTTTAGGACA+AGG | - | chr5.1:74014422-74014441 | MS.gene062293:intron | 35.0% |
!!! | TTAGTTTTTTTCTCCTTGCC+AGG | + | chr5.1:74015790-74015809 | None:intergenic | 35.0% |
AAAATCAACCTCTGCTGATC+AGG | + | chr5.1:74014459-74014478 | None:intergenic | 40.0% | |
AACGCCCTCTTCTTAATCAT+AGG | + | chr5.1:74015875-74015894 | None:intergenic | 40.0% | |
AAGAAGAAATACATGGGGGT+GGG | - | chr5.1:74015706-74015725 | MS.gene062293:intron | 40.0% | |
ATCGGCAATGGCTATTGTAA+TGG | - | chr5.1:74015290-74015309 | MS.gene062293:intron | 40.0% | |
ATGTTAGGGTCATTCTAGCA+AGG | + | chr5.1:74014357-74014376 | None:intergenic | 40.0% | |
CAGAAAGTTATGTAGATCCC+TGG | + | chr5.1:74015958-74015977 | None:intergenic | 40.0% | |
CTAAACCTAGAAACCAGTTC+AGG | + | chr5.1:74014980-74014999 | None:intergenic | 40.0% | |
GGAACGTGTTGAAGAAAAAG+AGG | - | chr5.1:74014653-74014672 | MS.gene062293:intron | 40.0% | |
GGATAAAGGTGAATATTGGG+TGG | - | chr5.1:74015574-74015593 | MS.gene062293:intron | 40.0% | |
GTTAAAAAGAGCGAGTCTTG+TGG | - | chr5.1:74014901-74014920 | MS.gene062293:intron | 40.0% | |
TAAAGGTGAATATTGGGTGG+GGG | - | chr5.1:74015577-74015596 | MS.gene062293:intron | 40.0% | |
TAAGAAGAAATACATGGGGG+TGG | - | chr5.1:74015705-74015724 | MS.gene062293:intron | 40.0% | |
TCTTCAATAACCCCTCAAGA+TGG | - | chr5.1:74015217-74015236 | MS.gene062293:intron | 40.0% | |
TCTTGAGGGGTTATTGAAGA+TGG | + | chr5.1:74015217-74015236 | None:intergenic | 40.0% | |
! | AAAGAGTACAACATTGAGGG+TGG | - | chr5.1:74016350-74016369 | MS.gene062293:CDS | 40.0% |
! | AAGTGTTGTTAAGGAGTTGG+AGG | - | chr5.1:74015749-74015768 | MS.gene062293:intron | 40.0% |
! | AGCATTTTGCCCAGATTCAT+AGG | + | chr5.1:74015191-74015210 | None:intergenic | 40.0% |
!! | AGTTTTGCATCTAGAGCGAA+AGG | - | chr5.1:74015359-74015378 | MS.gene062293:intron | 40.0% |
!!! | ATGTGGTTTTAGGACAAGGA+AGG | - | chr5.1:74014426-74014445 | MS.gene062293:intron | 40.0% |
ACCATCTTCCAACTGCTTAC+CGG | + | chr5.1:74014484-74014503 | None:intergenic | 45.0% | |
ACTGGTGGTTGTGGAATATG+TGG | - | chr5.1:74014409-74014428 | MS.gene062293:intron | 45.0% | |
GTCTAGTAGAATTGGGACCA+GGG | - | chr5.1:74015910-74015929 | MS.gene062293:CDS | 45.0% | |
GTGATTCTAACTGGTGGTTG+TGG | - | chr5.1:74014400-74014419 | MS.gene062293:intron | 45.0% | |
TGCTCTGCTGTTGAGCAAAT+CGG | - | chr5.1:74015272-74015291 | MS.gene062293:intron | 45.0% | |
! | CTCAACCTGAACTGGTTTCT+AGG | - | chr5.1:74014972-74014991 | MS.gene062293:intron | 45.0% |
! | GATTTTTGCCGGTAAGCAGT+TGG | - | chr5.1:74014473-74014492 | MS.gene062293:intron | 45.0% |
!! | CAGCAGAGGTTGATTTTTGC+CGG | - | chr5.1:74014462-74014481 | MS.gene062293:intron | 45.0% |
!! | GGGGTAAGGAGAGTATTGAT+AGG | - | chr5.1:74015596-74015615 | MS.gene062293:intron | 45.0% |
!! | TCACTTGGTGCTTGCATTGA+GGG | - | chr5.1:74016382-74016401 | MS.gene062293:CDS | 45.0% |
!! | TTCACTTGGTGCTTGCATTG+AGG | - | chr5.1:74016381-74016400 | MS.gene062293:CDS | 45.0% |
!!! | AGGGCGTTGAGAAGTCATTT+TGG | - | chr5.1:74015887-74015906 | MS.gene062293:CDS | 45.0% |
!!! | GGGCGTTGAGAAGTCATTTT+GGG | - | chr5.1:74015888-74015907 | MS.gene062293:CDS | 45.0% |
!!! | ATAAAAAATGTTTTTTTTTT+AGG | + | chr5.1:74015435-74015454 | None:intergenic | 5.0% |
!!! | TAAAAAATGTTTTTTTTTTA+GGG | + | chr5.1:74015434-74015453 | None:intergenic | 5.0% |
AGAAAGGGGGTAACCTAACC+TGG | + | chr5.1:74014253-74014272 | None:intergenic | 50.0% | |
AGGGCTCAGTTGGTTGCTAA+AGG | + | chr5.1:74015415-74015434 | None:intergenic | 50.0% | |
ATCAACCTCTGCTGATCAGG+AGG | + | chr5.1:74014456-74014475 | None:intergenic | 50.0% | |
CAACACTTCACTTGGTCCTC+AGG | - | chr5.1:74014538-74014557 | MS.gene062293:intron | 50.0% | |
CAAGCGATAAAAGACCTCCC+TGG | + | chr5.1:74015930-74015949 | None:intergenic | 50.0% | |
CTCGAGGGTGATAGTCTTTC+CGG | + | chr5.1:74014189-74014208 | None:intergenic | 50.0% | |
GCTGTTGAGCAAATCGGCAA+TGG | - | chr5.1:74015278-74015297 | MS.gene062293:intron | 50.0% | |
GGGTAACCTAACCTGGATCT+TGG | + | chr5.1:74014246-74014265 | None:intergenic | 50.0% | |
GGTCTAGTAGAATTGGGACC+AGG | - | chr5.1:74015909-74015928 | MS.gene062293:CDS | 50.0% | |
GTGAATATTGGGTGGGGGTA+AGG | - | chr5.1:74015582-74015601 | MS.gene062293:intron | 50.0% | |
GTTAAGGAGTTGGAGGTCCA+GGG | - | chr5.1:74015756-74015775 | MS.gene062293:intron | 50.0% | |
GTTTCAAACCTCTGCTGCAC+AGG | + | chr5.1:74014687-74014706 | None:intergenic | 50.0% | |
TAGTAGAATTGGGACCAGGG+AGG | - | chr5.1:74015913-74015932 | MS.gene062293:CDS | 50.0% | |
TCAACCTCTGCTGATCAGGA+GGG | + | chr5.1:74014455-74014474 | None:intergenic | 50.0% | |
TCAAGGCCAAGATCCAGGTT+AGG | - | chr5.1:74014237-74014256 | MS.gene062293:CDS | 50.0% | |
TCACTTGGTCCTCAGGCTTA+GGG | - | chr5.1:74014545-74014564 | MS.gene062293:intron | 50.0% | |
TGCTCAACAGCAGAGCAAGT+TGG | + | chr5.1:74015269-74015288 | None:intergenic | 50.0% | |
TGTTAAGGAGTTGGAGGTCC+AGG | - | chr5.1:74015755-74015774 | MS.gene062293:intron | 50.0% | |
TTCACTTGGTCCTCAGGCTT+AGG | - | chr5.1:74014544-74014563 | MS.gene062293:intron | 50.0% | |
!! | CACTTGGTGCTTGCATTGAG+GGG | - | chr5.1:74016383-74016402 | MS.gene062293:CDS | 50.0% |
CAACGTCAAGGCCAAGATCC+AGG | - | chr5.1:74014232-74014251 | MS.gene062293:CDS | 55.0% | |
CACTTGGTCCTCAGGCTTAG+GGG | - | chr5.1:74014546-74014565 | MS.gene062293:intron | 55.0% | |
CGACACCATCGACAACGTCA+AGG | - | chr5.1:74014220-74014239 | MS.gene062293:CDS | 55.0% | |
CGGAAAGACTATCACCCTCG+AGG | - | chr5.1:74014187-74014206 | MS.gene062293:CDS | 55.0% | |
CTTGCCAGGACTTGAAACCC+TGG | + | chr5.1:74015776-74015795 | None:intergenic | 55.0% | |
GCCGGTAAGCAGTTGGAAGA+TGG | - | chr5.1:74014480-74014499 | MS.gene062293:intron | 55.0% | |
GTATCCCTCCTGATCAGCAG+AGG | - | chr5.1:74014448-74014467 | MS.gene062293:intron | 55.0% | |
GTATTCCACCTGTGCAGCAG+AGG | - | chr5.1:74014676-74014695 | MS.gene062293:intron | 55.0% | |
TCAAACCTCTGCTGCACAGG+TGG | + | chr5.1:74014684-74014703 | None:intergenic | 55.0% | |
TGCTGCAGGCTCATCTATGC+TGG | - | chr5.1:74016299-74016318 | MS.gene062293:intron | 55.0% | |
! | AGGTCCAGGGTTTCAAGTCC+TGG | - | chr5.1:74015769-74015788 | MS.gene062293:intron | 55.0% |
! | CAGGGTTTCAAGTCCTGGCA+AGG | - | chr5.1:74015774-74015793 | MS.gene062293:intron | 55.0% |
! | GGGTGGTTCTGTGCTTCACT+TGG | - | chr5.1:74016367-74016386 | MS.gene062293:CDS | 55.0% |
! | TTGGTGCTTGCATTGAGGGG+TGG | - | chr5.1:74016386-74016405 | MS.gene062293:CDS | 55.0% |
!! | CTTGGCCTTGACGTTGTCGA+TGG | + | chr5.1:74014228-74014247 | None:intergenic | 55.0% |
AGCCTGCAGCAAGTGACAGC+AGG | + | chr5.1:74016290-74016309 | None:intergenic | 60.0% | |
ATGGGGGTGGGTAGTGCAAC+TGG | - | chr5.1:74015718-74015737 | MS.gene062293:intron | 60.0% | |
GTCGCTGCTCTCAACCTCGA+GGG | + | chr5.1:74014204-74014223 | None:intergenic | 60.0% | |
TGGTTCCTCCCCTAAGCCTG+AGG | + | chr5.1:74014557-74014576 | None:intergenic | 60.0% | |
TGTCGCTGCTCTCAACCTCG+AGG | + | chr5.1:74014205-74014224 | None:intergenic | 60.0% | |
TTGGTCCTCAGGCTTAGGGG+AGG | - | chr5.1:74014549-74014568 | MS.gene062293:intron | 60.0% | |
! | CACCTGCTGTCACTTGCTGC+AGG | - | chr5.1:74016285-74016304 | MS.gene062293:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 74014161 | 74016415 | 74014161 | ID=MS.gene062293 |
chr5.1 | mRNA | 74014161 | 74016415 | 74014161 | ID=MS.gene062293.t1;Parent=MS.gene062293 |
chr5.1 | exon | 74016323 | 74016415 | 74016323 | ID=MS.gene062293.t1.exon1;Parent=MS.gene062293.t1 |
chr5.1 | CDS | 74016323 | 74016415 | 74016323 | ID=cds.MS.gene062293.t1;Parent=MS.gene062293.t1 |
chr5.1 | exon | 74015879 | 74016138 | 74015879 | ID=MS.gene062293.t1.exon2;Parent=MS.gene062293.t1 |
chr5.1 | CDS | 74015879 | 74016138 | 74015879 | ID=cds.MS.gene062293.t1;Parent=MS.gene062293.t1 |
chr5.1 | exon | 74014161 | 74014269 | 74014161 | ID=MS.gene062293.t1.exon3;Parent=MS.gene062293.t1 |
chr5.1 | CDS | 74014161 | 74014269 | 74014161 | ID=cds.MS.gene062293.t1;Parent=MS.gene062293.t1 |
Gene Sequence |
Protein sequence |