Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062683.t1 | XP_004497487.1 | 70.9 | 556 | 162 | 0 | 1 | 556 | 1 | 556 | 1.40E-233 | 818.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062683.t1 | B9SCB6 | 50.5 | 553 | 270 | 2 | 1 | 553 | 1 | 549 | 2.0e-164 | 580.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062683.t1 | A0A1S2Y0Q7 | 70.9 | 556 | 162 | 0 | 1 | 556 | 1 | 556 | 1.0e-233 | 818.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene059265 | MS.gene062683 | 0.839463 | 1.56E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene066316 | MS.gene062683 | PPI |
MS.gene77594 | MS.gene062683 | PPI |
MS.gene038985 | MS.gene062683 | PPI |
MS.gene066310 | MS.gene062683 | PPI |
MS.gene062683 | MS.gene42723 | PPI |
MS.gene038982 | MS.gene062683 | PPI |
MS.gene062683 | MS.gene069726 | PPI |
MS.gene062683 | MS.gene045736 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062683.t1 | MTR_5g062230 | 69.424 | 556 | 167 | 1 | 1 | 556 | 1 | 553 | 0.0 | 811 |
MS.gene062683.t1 | MTR_6g039440 | 68.885 | 556 | 170 | 1 | 1 | 556 | 1 | 553 | 0.0 | 807 |
MS.gene062683.t1 | MTR_6g008560 | 67.864 | 557 | 178 | 1 | 1 | 556 | 1 | 557 | 0.0 | 806 |
MS.gene062683.t1 | MTR_3g464190 | 67.145 | 557 | 182 | 1 | 1 | 556 | 1 | 557 | 0.0 | 788 |
MS.gene062683.t1 | MTR_4g048460 | 67.213 | 549 | 180 | 0 | 8 | 556 | 13 | 561 | 0.0 | 776 |
MS.gene062683.t1 | MTR_5g073200 | 67.582 | 546 | 176 | 1 | 12 | 556 | 4 | 549 | 0.0 | 764 |
MS.gene062683.t1 | MTR_5g094620 | 64.388 | 556 | 179 | 1 | 1 | 556 | 1 | 537 | 0.0 | 754 |
MS.gene062683.t1 | MTR_5g073260 | 65.751 | 546 | 185 | 2 | 13 | 556 | 7 | 552 | 0.0 | 750 |
MS.gene062683.t1 | MTR_4g081460 | 57.989 | 557 | 231 | 2 | 2 | 556 | 7 | 562 | 0.0 | 677 |
MS.gene062683.t1 | MTR_4g048460 | 66.667 | 453 | 151 | 0 | 7 | 459 | 12 | 464 | 0.0 | 631 |
MS.gene062683.t1 | MTR_6g008560 | 67.082 | 401 | 132 | 0 | 156 | 556 | 1 | 401 | 0.0 | 580 |
MS.gene062683.t1 | MTR_2g082010 | 44.526 | 548 | 298 | 6 | 13 | 556 | 23 | 568 | 3.16e-175 | 507 |
MS.gene062683.t1 | MTR_2g081980 | 45.537 | 549 | 291 | 8 | 14 | 556 | 11 | 557 | 3.83e-174 | 504 |
MS.gene062683.t1 | MTR_8g007515 | 45.091 | 550 | 294 | 6 | 13 | 556 | 9 | 556 | 9.79e-171 | 495 |
MS.gene062683.t1 | MTR_2g082060 | 42.623 | 549 | 296 | 8 | 14 | 556 | 18 | 553 | 5.60e-159 | 465 |
MS.gene062683.t1 | MTR_4g019550 | 41.336 | 554 | 301 | 8 | 14 | 556 | 18 | 558 | 1.14e-145 | 431 |
MS.gene062683.t1 | MTR_2g082050 | 38.447 | 515 | 256 | 9 | 43 | 554 | 1 | 457 | 2.06e-123 | 371 |
MS.gene062683.t1 | MTR_4g045810 | 35.175 | 543 | 341 | 4 | 16 | 554 | 44 | 579 | 1.35e-115 | 355 |
MS.gene062683.t1 | MTR_2g064425 | 36.996 | 546 | 330 | 9 | 13 | 554 | 49 | 584 | 3.45e-107 | 333 |
MS.gene062683.t1 | MTR_2g089130 | 34.747 | 495 | 307 | 5 | 44 | 534 | 62 | 544 | 5.28e-103 | 322 |
MS.gene062683.t1 | MTR_2g089120 | 34.442 | 511 | 316 | 7 | 49 | 554 | 67 | 563 | 9.27e-102 | 318 |
MS.gene062683.t1 | MTR_8g057020 | 33.272 | 547 | 356 | 6 | 10 | 554 | 48 | 587 | 2.33e-98 | 310 |
MS.gene062683.t1 | MTR_2g064425 | 35.348 | 546 | 324 | 10 | 13 | 554 | 49 | 569 | 5.15e-97 | 306 |
MS.gene062683.t1 | MTR_2g065450 | 32.664 | 548 | 356 | 7 | 10 | 554 | 51 | 588 | 2.51e-93 | 297 |
MS.gene062683.t1 | MTR_4g092020 | 33.464 | 511 | 327 | 6 | 44 | 550 | 64 | 565 | 2.06e-89 | 286 |
MS.gene062683.t1 | MTR_2g064425 | 43.324 | 367 | 196 | 7 | 13 | 376 | 49 | 406 | 9.15e-88 | 278 |
MS.gene062683.t1 | MTR_7g010710 | 31.071 | 560 | 373 | 9 | 1 | 554 | 1 | 553 | 1.42e-84 | 273 |
MS.gene062683.t1 | MTR_7g057340 | 66.860 | 172 | 57 | 0 | 385 | 556 | 1 | 172 | 4.90e-84 | 259 |
MS.gene062683.t1 | MTR_4g092010 | 31.076 | 502 | 332 | 7 | 55 | 548 | 61 | 556 | 5.61e-82 | 267 |
MS.gene062683.t1 | MTR_2g064425 | 40.872 | 367 | 190 | 8 | 13 | 376 | 49 | 391 | 1.49e-77 | 251 |
MS.gene062683.t1 | MTR_7g057390 | 64.535 | 172 | 58 | 1 | 385 | 556 | 1 | 169 | 1.96e-77 | 242 |
MS.gene062683.t1 | MTR_5g094530 | 57.078 | 219 | 56 | 4 | 166 | 381 | 1 | 184 | 5.42e-75 | 236 |
MS.gene062683.t1 | MTR_2g010960 | 28.958 | 518 | 343 | 8 | 47 | 547 | 9 | 518 | 9.10e-72 | 239 |
MS.gene062683.t1 | MTR_6g064980 | 29.899 | 495 | 334 | 8 | 54 | 539 | 13 | 503 | 7.02e-69 | 231 |
MS.gene062683.t1 | MTR_3g465090 | 29.979 | 487 | 334 | 6 | 54 | 534 | 13 | 498 | 1.40e-68 | 230 |
MS.gene062683.t1 | MTR_3g063170 | 29.691 | 485 | 328 | 8 | 54 | 529 | 13 | 493 | 1.23e-67 | 228 |
MS.gene062683.t1 | MTR_3g063120 | 28.717 | 491 | 339 | 8 | 68 | 550 | 1 | 488 | 3.05e-66 | 223 |
MS.gene062683.t1 | MTR_3g052120 | 29.563 | 504 | 344 | 9 | 54 | 550 | 13 | 512 | 1.90e-65 | 222 |
MS.gene062683.t1 | MTR_3g063140 | 29.184 | 490 | 334 | 8 | 54 | 534 | 13 | 498 | 6.55e-65 | 220 |
MS.gene062683.t1 | MTR_7g050990 | 60.843 | 166 | 54 | 2 | 199 | 364 | 27 | 181 | 1.31e-57 | 207 |
MS.gene062683.t1 | MTR_6g065040 | 29.262 | 393 | 267 | 6 | 145 | 529 | 2 | 391 | 1.09e-54 | 190 |
MS.gene062683.t1 | MTR_3g015080 | 47.674 | 172 | 52 | 2 | 385 | 556 | 1 | 134 | 3.74e-46 | 158 |
MS.gene062683.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 70 | 554 | 65 | 569 | 2.47e-36 | 143 |
MS.gene062683.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 70 | 554 | 256 | 760 | 4.65e-36 | 144 |
MS.gene062683.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 70 | 554 | 269 | 773 | 5.23e-36 | 144 |
MS.gene062683.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 70 | 554 | 276 | 780 | 5.47e-36 | 143 |
MS.gene062683.t1 | MTR_3g063160 | 31.655 | 278 | 185 | 5 | 54 | 328 | 13 | 288 | 2.03e-35 | 134 |
MS.gene062683.t1 | MTR_2g064295 | 24.138 | 522 | 342 | 16 | 70 | 554 | 256 | 760 | 2.28e-34 | 139 |
MS.gene062683.t1 | MTR_3g058160 | 24.630 | 540 | 338 | 16 | 70 | 554 | 276 | 801 | 2.07e-33 | 135 |
MS.gene062683.t1 | MTR_2g012870 | 23.614 | 559 | 383 | 17 | 24 | 554 | 212 | 754 | 3.62e-30 | 126 |
MS.gene062683.t1 | MTR_2g012900 | 24.200 | 500 | 330 | 17 | 24 | 486 | 212 | 699 | 1.46e-28 | 121 |
MS.gene062683.t1 | MTR_7g011663 | 29.927 | 274 | 160 | 6 | 68 | 310 | 344 | 616 | 1.03e-23 | 106 |
MS.gene062683.t1 | MTR_7g094970 | 27.273 | 275 | 168 | 6 | 68 | 313 | 206 | 477 | 1.83e-23 | 105 |
MS.gene062683.t1 | MTR_5g030050 | 28.409 | 264 | 156 | 7 | 73 | 312 | 3 | 257 | 8.52e-21 | 93.6 |
MS.gene062683.t1 | MTR_7g011770 | 28.669 | 293 | 180 | 7 | 68 | 332 | 240 | 531 | 1.01e-20 | 96.7 |
MS.gene062683.t1 | MTR_5g081730 | 36.364 | 110 | 65 | 1 | 153 | 257 | 2 | 111 | 2.39e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062683.t1 | AT5G23960 | 39.746 | 551 | 317 | 7 | 13 | 556 | 3 | 545 | 2.35e-146 | 432 |
MS.gene062683.t1 | AT5G23960 | 39.711 | 554 | 315 | 9 | 13 | 556 | 3 | 547 | 5.67e-145 | 429 |
MS.gene062683.t1 | AT1G70080 | 37.251 | 553 | 337 | 7 | 8 | 552 | 57 | 607 | 1.06e-130 | 395 |
MS.gene062683.t1 | AT3G14490 | 37.432 | 553 | 336 | 5 | 10 | 556 | 53 | 601 | 7.20e-127 | 384 |
MS.gene062683.t1 | AT3G14520 | 36.229 | 541 | 335 | 5 | 22 | 556 | 68 | 604 | 4.16e-124 | 377 |
MS.gene062683.t1 | AT1G31950 | 35.949 | 548 | 328 | 6 | 22 | 556 | 70 | 607 | 3.39e-123 | 375 |
MS.gene062683.t1 | AT1G31950 | 36.229 | 541 | 335 | 5 | 22 | 556 | 70 | 606 | 2.41e-122 | 373 |
MS.gene062683.t1 | AT3G14540 | 36.481 | 540 | 335 | 4 | 22 | 556 | 65 | 601 | 1.75e-121 | 370 |
MS.gene062683.t1 | AT3G29410 | 35.649 | 547 | 338 | 5 | 17 | 556 | 64 | 603 | 5.72e-119 | 364 |
MS.gene062683.t1 | AT5G44630 | 35.584 | 548 | 336 | 8 | 18 | 554 | 14 | 555 | 7.11e-116 | 355 |
MS.gene062683.t1 | AT1G33750 | 34.579 | 535 | 344 | 4 | 24 | 556 | 73 | 603 | 3.80e-115 | 354 |
MS.gene062683.t1 | AT4G20210 | 34.124 | 548 | 348 | 7 | 17 | 556 | 58 | 600 | 4.35e-114 | 352 |
MS.gene062683.t1 | AT3G32030 | 34.074 | 540 | 348 | 6 | 22 | 556 | 68 | 604 | 5.65e-114 | 351 |
MS.gene062683.t1 | AT3G29410 | 36.200 | 500 | 315 | 3 | 59 | 556 | 1 | 498 | 1.65e-113 | 347 |
MS.gene062683.t1 | AT4G13300 | 35.065 | 539 | 339 | 7 | 25 | 556 | 20 | 554 | 7.79e-112 | 344 |
MS.gene062683.t1 | AT4G20200 | 35.521 | 518 | 320 | 8 | 48 | 556 | 92 | 604 | 1.55e-111 | 345 |
MS.gene062683.t1 | AT4G15870 | 35.120 | 541 | 325 | 10 | 25 | 556 | 75 | 598 | 6.67e-108 | 335 |
MS.gene062683.t1 | AT4G13280 | 34.451 | 537 | 341 | 7 | 27 | 556 | 22 | 554 | 1.34e-106 | 331 |
MS.gene062683.t1 | AT3G29190 | 33.333 | 519 | 330 | 7 | 48 | 556 | 89 | 601 | 1.90e-105 | 329 |
MS.gene062683.t1 | AT1G31950 | 36.933 | 463 | 269 | 6 | 22 | 471 | 70 | 522 | 4.78e-105 | 326 |
MS.gene062683.t1 | AT3G14540 | 37.892 | 446 | 270 | 3 | 22 | 463 | 65 | 507 | 1.59e-104 | 324 |
MS.gene062683.t1 | AT2G23230 | 34.182 | 550 | 347 | 9 | 16 | 555 | 55 | 599 | 3.31e-102 | 321 |
MS.gene062683.t1 | AT4G20230 | 33.463 | 514 | 329 | 7 | 48 | 552 | 92 | 601 | 5.77e-102 | 320 |
MS.gene062683.t1 | AT4G20230 | 33.463 | 514 | 329 | 7 | 48 | 552 | 104 | 613 | 8.45e-102 | 320 |
MS.gene062683.t1 | AT3G29110 | 34.375 | 544 | 348 | 8 | 17 | 554 | 55 | 595 | 2.05e-101 | 318 |
MS.gene062683.t1 | AT2G23230 | 34.000 | 550 | 343 | 10 | 16 | 555 | 55 | 594 | 9.47e-100 | 315 |
MS.gene062683.t1 | AT1G66020 | 32.727 | 550 | 358 | 7 | 12 | 552 | 48 | 594 | 1.11e-98 | 311 |
MS.gene062683.t1 | AT1G48800 | 32.234 | 546 | 354 | 9 | 17 | 552 | 63 | 602 | 9.70e-96 | 304 |
MS.gene062683.t1 | AT4G16730 | 32.413 | 543 | 344 | 10 | 28 | 554 | 2 | 537 | 1.49e-95 | 301 |
MS.gene062683.t1 | AT4G13280 | 33.520 | 537 | 316 | 9 | 27 | 556 | 22 | 524 | 7.09e-95 | 299 |
MS.gene062683.t1 | AT4G16730 | 32.665 | 499 | 315 | 8 | 73 | 556 | 1 | 493 | 6.70e-92 | 291 |
MS.gene062683.t1 | AT4G16740 | 32.432 | 555 | 348 | 13 | 15 | 556 | 24 | 564 | 6.70e-90 | 288 |
MS.gene062683.t1 | AT1G61680 | 32.465 | 499 | 325 | 4 | 54 | 546 | 77 | 569 | 5.70e-89 | 285 |
MS.gene062683.t1 | AT2G24210 | 31.429 | 560 | 363 | 11 | 10 | 556 | 39 | 590 | 7.36e-88 | 283 |
MS.gene062683.t1 | AT1G61680 | 32.064 | 499 | 320 | 5 | 54 | 546 | 77 | 562 | 1.63e-85 | 276 |
MS.gene062683.t1 | AT5G48110 | 37.901 | 343 | 208 | 5 | 215 | 556 | 1 | 339 | 4.34e-85 | 268 |
MS.gene062683.t1 | AT1G48820 | 30.983 | 539 | 322 | 11 | 17 | 549 | 63 | 557 | 1.84e-82 | 268 |
MS.gene062683.t1 | AT3G25830 | 30.249 | 562 | 362 | 13 | 14 | 556 | 44 | 594 | 5.21e-81 | 265 |
MS.gene062683.t1 | AT3G25820 | 30.249 | 562 | 362 | 13 | 14 | 556 | 44 | 594 | 5.21e-81 | 265 |
MS.gene062683.t1 | AT3G25810 | 30.660 | 561 | 364 | 11 | 14 | 556 | 44 | 597 | 5.24e-81 | 265 |
MS.gene062683.t1 | AT4G16740 | 35.185 | 378 | 224 | 8 | 15 | 381 | 24 | 391 | 1.02e-69 | 229 |
MS.gene062683.t1 | AT1G66020 | 34.748 | 377 | 234 | 7 | 12 | 379 | 48 | 421 | 2.73e-68 | 227 |
MS.gene062683.t1 | AT3G25820 | 32.391 | 389 | 240 | 9 | 14 | 389 | 44 | 422 | 2.28e-62 | 212 |
MS.gene062683.t1 | AT4G16740 | 35.168 | 327 | 192 | 7 | 15 | 330 | 24 | 341 | 2.71e-58 | 199 |
MS.gene062683.t1 | AT4G16740 | 35.168 | 327 | 192 | 7 | 15 | 330 | 24 | 341 | 2.71e-58 | 199 |
MS.gene062683.t1 | AT3G25820 | 32.827 | 329 | 200 | 7 | 14 | 330 | 44 | 363 | 6.69e-54 | 188 |
MS.gene062683.t1 | AT3G25820 | 32.827 | 329 | 200 | 7 | 14 | 330 | 44 | 363 | 6.69e-54 | 188 |
MS.gene062683.t1 | AT1G79460 | 25.243 | 515 | 332 | 19 | 70 | 546 | 274 | 773 | 3.58e-31 | 129 |
MS.gene062683.t1 | AT1G61120 | 23.633 | 512 | 355 | 10 | 68 | 556 | 286 | 784 | 1.09e-26 | 115 |
MS.gene062683.t1 | AT4G02780 | 28.846 | 260 | 157 | 5 | 68 | 300 | 329 | 587 | 1.32e-22 | 102 |
Find 92 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCTCTTGCTGTGCTATTT+AGG | 0.103456 | 6.4:+45638765 | MS.gene062683:CDS |
TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6.4:+45639720 | MS.gene062683:CDS |
TTCTCTTGCTGTGCTATTTA+GGG | 0.189824 | 6.4:+45638766 | MS.gene062683:CDS |
TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6.4:-45639992 | None:intergenic |
ATGCAAGTAGAATTTCATTA+TGG | 0.248221 | 6.4:-45639708 | None:intergenic |
TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6.4:+45638716 | MS.gene062683:CDS |
TCCTTATGCTTCAGAATCTA+TGG | 0.272455 | 6.4:+45638307 | MS.gene062683:CDS |
CTGCTATACATTGCAGGCTT+AGG | 0.276774 | 6.4:+45641464 | MS.gene062683:CDS |
AGCCTGCATCAAAAGGAATT+TGG | 0.290423 | 6.4:+45639760 | MS.gene062683:CDS |
AGACGAAATTAATCAAGTTT+TGG | 0.301364 | 6.4:+45638685 | MS.gene062683:CDS |
GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6.4:-45640034 | None:intergenic |
CAGATTTCCACCCTAGCGTT+TGG | 0.311610 | 6.4:+45638270 | MS.gene062683:CDS |
AGATTTCCACCCTAGCGTTT+GGG | 0.325288 | 6.4:+45638271 | MS.gene062683:CDS |
TGCAAATCCGATTTCTCATT+AGG | 0.335406 | 6.4:-45638236 | None:intergenic |
TAATTGCTTGGAGGATCTTC+CGG | 0.335446 | 6.4:+45640384 | MS.gene062683:CDS |
TGAGGGAATATGATATGAAT+AGG | 0.340079 | 6.4:+45641666 | MS.gene062683:CDS |
TTCCTTGCTCGTCCTTGAAT+TGG | 0.345275 | 6.4:-45639432 | None:intergenic |
GAGTAGTTGAATGTTGCTTT+TGG | 0.353926 | 6.4:+45639947 | MS.gene062683:CDS |
ATGCTGCTGCTATACATTGC+AGG | 0.354080 | 6.4:+45641458 | MS.gene062683:CDS |
TGTGCCGCAGTATTCATATC+AGG | 0.354426 | 6.4:-45638545 | None:intergenic |
AGGACATGTTTCTTCGTACT+TGG | 0.361077 | 6.4:+45641634 | MS.gene062683:CDS |
GACATATATTAATGATTTGC+TGG | 0.369605 | 6.4:+45641871 | MS.gene062683:CDS |
GATTGATTCAATATGTCGTT+TGG | 0.383797 | 6.4:+45638643 | MS.gene062683:CDS |
CATCAATCCTAATGAGAAAT+CGG | 0.385502 | 6.4:+45638229 | MS.gene062683:CDS |
TGCAAGTAGAATTTCATTAT+GGG | 0.387262 | 6.4:-45639707 | None:intergenic |
CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6.4:+45641648 | MS.gene062683:CDS |
GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6.4:-45639686 | None:intergenic |
CGACAAAAGACATCTTTGAT+TGG | 0.390521 | 6.4:+45641410 | MS.gene062683:CDS |
GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6.4:+45640417 | MS.gene062683:CDS |
TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6.4:-45641319 | None:intergenic |
TAAAGCAACTTCATGTAATC+CGG | 0.421098 | 6.4:-45640403 | None:intergenic |
ATAAATACTCAAATTTCTAA+AGG | 0.433133 | 6.4:-45641899 | None:intergenic |
GACAAAAGACATCTTTGATT+GGG | 0.442878 | 6.4:+45641411 | MS.gene062683:CDS |
AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6.4:+45641711 | MS.gene062683:CDS |
TGCTATACATTGCAGGCTTA+GGG | 0.448464 | 6.4:+45641465 | MS.gene062683:CDS |
ATTGATTCAATATGTCGTTT+GGG | 0.450241 | 6.4:+45638644 | MS.gene062683:CDS |
TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6.4:+45640372 | MS.gene062683:intron |
TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6.4:+45641378 | MS.gene062683:CDS |
ATAGTTAGCATTCAGCCATC+TGG | 0.458951 | 6.4:-45641293 | None:intergenic |
TAATGAAATTCTACTTGCAT+TGG | 0.460272 | 6.4:+45639711 | MS.gene062683:CDS |
GATGACACATACGATGCATA+TGG | 0.460937 | 6.4:+45640051 | MS.gene062683:CDS |
ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6.4:+45641379 | MS.gene062683:CDS |
GCTCCAAAGCCTGCATCAAA+AGG | 0.461740 | 6.4:+45639753 | MS.gene062683:CDS |
GAGGGAATATGATATGAATA+GGG | 0.475500 | 6.4:+45641667 | MS.gene062683:CDS |
TTGCAAGAGAAGGACTCAAT+CGG | 0.484754 | 6.4:-45639591 | None:intergenic |
CGCTTGGAAAGATATAAATC+AGG | 0.490061 | 6.4:+45641727 | MS.gene062683:CDS |
ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6.4:-45639977 | None:intergenic |
CATGGACTTTATGTTTCACC+TGG | 0.496318 | 6.4:+45638800 | MS.gene062683:CDS |
TTCTGGTCACCTTGAGTCGA+TGG | 0.501829 | 6.4:+45639564 | MS.gene062683:CDS |
CTGTGCTATTTAGGGTGTTG+AGG | 0.502767 | 6.4:+45638774 | MS.gene062683:CDS |
TTGAGAACACACGTCAGAAT+AGG | 0.502783 | 6.4:-45641779 | None:intergenic |
GAGCAAGAAATGAAGAAAGA+AGG | 0.510890 | 6.4:+45640457 | MS.gene062683:CDS |
ATACAGGTGGTGGAAGGAGT+TGG | 0.512387 | 6.4:+45639891 | MS.gene062683:intron |
AGATGTGTTCAACCAATTCA+AGG | 0.513117 | 6.4:+45639420 | MS.gene062683:intron |
ACCATAGATTCTGAAGCATA+AGG | 0.518574 | 6.4:-45638308 | None:intergenic |
TAACTTCTTGCCACTAGCCT+AGG | 0.521919 | 6.4:-45639658 | None:intergenic |
GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6.4:+45639508 | MS.gene062683:CDS |
TAAGAAGTCGTAGCCAACAC+TGG | 0.522936 | 6.4:-45641367 | None:intergenic |
GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6.4:+45640375 | MS.gene062683:CDS |
TGGCCTCACTCATATAAGCT+TGG | 0.531321 | 6.4:-45641273 | None:intergenic |
TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6.4:-45639991 | None:intergenic |
ATAGGTAACGGAACTTCAGT+TGG | 0.538099 | 6.4:-45641761 | None:intergenic |
AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6.4:+45641614 | MS.gene062683:intron |
AACATTGGTCGTAGATGTTG+AGG | 0.541350 | 6.4:+45639465 | MS.gene062683:CDS |
TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6.4:-45639590 | None:intergenic |
AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6.4:+45639989 | MS.gene062683:CDS |
CTTATATGAGTGAGGCCAGA+TGG | 0.549142 | 6.4:+45641278 | MS.gene062683:CDS |
TTTAGGGTGTTGAGGCAACA+TGG | 0.552007 | 6.4:+45638782 | MS.gene062683:CDS |
TTTACTTGTGTTGCAAGAGA+AGG | 0.558925 | 6.4:-45639601 | None:intergenic |
ATCGGGTGGCCATCGACTCA+AGG | 0.563910 | 6.4:-45639573 | None:intergenic |
GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6.4:+45641649 | MS.gene062683:CDS |
GTATGAAGCCTCACATATGA+TGG | 0.567934 | 6.4:+45639501 | MS.gene062683:CDS |
ATCAAGTGGTTACCCAGTGT+TGG | 0.570889 | 6.4:+45641354 | MS.gene062683:CDS |
ATAGCACAGCAAGAGAATGA+AGG | 0.572946 | 6.4:-45638760 | None:intergenic |
CTTTATATACAGGTGGTGGA+AGG | 0.574461 | 6.4:+45639885 | MS.gene062683:intron |
TTGGCTACGACTTCTTACAT+TGG | 0.586299 | 6.4:+45641373 | MS.gene062683:CDS |
AGGAAACTTCAGTGAAACAT+TGG | 0.587870 | 6.4:+45639450 | MS.gene062683:CDS |
ACTACTCTATCTCGTGCATA+CGG | 0.592321 | 6.4:-45639931 | None:intergenic |
CACATATCAACAATATCAAG+TGG | 0.594145 | 6.4:+45641340 | MS.gene062683:CDS |
GATTTCCACCCTAGCGTTTG+GGG | 0.596026 | 6.4:+45638272 | MS.gene062683:CDS |
AATCTCCCCAAACGCTAGGG+TGG | 0.601357 | 6.4:-45638277 | None:intergenic |
GATAACTACACACACTCTGA+CGG | 0.610210 | 6.4:+45641839 | MS.gene062683:CDS |
AAGAAGTCGTAGCCAACACT+GGG | 0.613680 | 6.4:-45641366 | None:intergenic |
AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6.4:+45639430 | MS.gene062683:CDS |
ACATTGGTCGTAGATGTTGA+GGG | 0.633793 | 6.4:+45639466 | MS.gene062683:CDS |
ACCATGAACCATCATATGTG+AGG | 0.634158 | 6.4:-45639509 | None:intergenic |
AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6.4:+45641270 | MS.gene062683:CDS |
GGATGAAATTGTGTCAAGCG+AGG | 0.666273 | 6.4:+45641486 | MS.gene062683:CDS |
ACACACGTCAGAATAGGTAA+CGG | 0.688917 | 6.4:-45641773 | None:intergenic |
AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6.4:-45639587 | None:intergenic |
GGAACCTGATATGAATACTG+CGG | 0.696636 | 6.4:+45638541 | MS.gene062683:intron |
TAACTATATACCAACAACAG+AGG | 0.703519 | 6.4:+45641309 | MS.gene062683:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATATAAAATAAATGTTAAT+AGG | - | chr6.4:45641224-45641243 | None:intergenic | 10.0% |
!! | GAAAAAAATTTACATAAAAT+AGG | + | chr6.4:45639050-45639069 | MS.gene062683:intron | 10.0% |
!! | TGATTATAAAGTAATATTAA+TGG | + | chr6.4:45639165-45639184 | MS.gene062683:intron | 10.0% |
!!! | AATTACATAGTTTTTTTTTT+TGG | + | chr6.4:45641191-45641210 | MS.gene062683:intron | 10.0% |
!!! | AATTTCATTAAAAATTTTTG+TGG | + | chr6.4:45640615-45640634 | MS.gene062683:intron | 10.0% |
!!! | CATTTTTTATGTTTTTAATT+TGG | + | chr6.4:45638856-45638875 | MS.gene062683:intron | 10.0% |
!!! | CTATTAACATTTATTTTATA+TGG | + | chr6.4:45641222-45641241 | MS.gene062683:intron | 10.0% |
!!! | TAATTTTTATTATTGATAGT+AGG | - | chr6.4:45640833-45640852 | None:intergenic | 10.0% |
!! | ACAAATTGATAAACTAAAAA+AGG | + | chr6.4:45638565-45638584 | MS.gene062683:CDS | 15.0% |
!! | ATGAGTAAATAAATAGTATA+AGG | - | chr6.4:45638403-45638422 | None:intergenic | 15.0% |
!! | TAATATGAATGTCTAAAAAA+TGG | + | chr6.4:45638981-45639000 | MS.gene062683:intron | 15.0% |
!! | TATAAAGACAAAAATAGTAT+AGG | - | chr6.4:45639872-45639891 | None:intergenic | 15.0% |
!! | TCGTAGAATTAATATTATAA+AGG | - | chr6.4:45641096-45641115 | None:intergenic | 15.0% |
!!! | AAACATTTTTACTTCATTTT+AGG | + | chr6.4:45640716-45640735 | MS.gene062683:intron | 15.0% |
!!! | ATTGTTGTTTAATATTATTG+TGG | + | chr6.4:45639379-45639398 | MS.gene062683:intron | 15.0% |
!!! | TATTGTTTATCTTTAAAGTT+TGG | - | chr6.4:45640166-45640185 | None:intergenic | 15.0% |
!! | AAAAAAGGTTCTTACTTAAT+AGG | - | chr6.4:45639205-45639224 | None:intergenic | 20.0% |
!! | AATTGATAAACTAAAAAAGG+AGG | + | chr6.4:45638568-45638587 | MS.gene062683:CDS | 20.0% |
!! | GAAAATAATTAAAAGAGATG+AGG | - | chr6.4:45639103-45639122 | None:intergenic | 20.0% |
!! | TGTAAAAAACTTATTATCCA+TGG | + | chr6.4:45640854-45640873 | MS.gene062683:intron | 20.0% |
!!! | AAATTTTTGTGGTTATCAAA+TGG | + | chr6.4:45640626-45640645 | MS.gene062683:intron | 20.0% |
!!! | AATCAAAATGATTTTTAGGT+GGG | + | chr6.4:45640357-45640376 | MS.gene062683:intron | 20.0% |
!!! | AATTCTCTTTTTTCTAAAAG+TGG | - | chr6.4:45639011-45639030 | None:intergenic | 20.0% |
!!! | CTATTTTTGTCTTTATATAC+AGG | + | chr6.4:45639875-45639894 | MS.gene062683:intron | 20.0% |
!!! | TATCTTGACATTTTAATTAC+TGG | + | chr6.4:45641122-45641141 | MS.gene062683:intron | 20.0% |
!!! | TGAATTAGAACTTTTTACTA+AGG | + | chr6.4:45640083-45640102 | MS.gene062683:CDS | 20.0% |
!!! | TGATTCTTTTAATAGAGTAA+TGG | + | chr6.4:45640324-45640343 | MS.gene062683:intron | 20.0% |
!!! | TTGCAATCAAAATGATTTTT+AGG | + | chr6.4:45640353-45640372 | MS.gene062683:intron | 20.0% |
! | AACTCAGTTAATAAAATCCA+TGG | - | chr6.4:45640874-45640893 | None:intergenic | 25.0% |
! | AAGAAAAATGTATCATCATG+AGG | + | chr6.4:45640931-45640950 | MS.gene062683:intron | 25.0% |
! | AATATATCCATCTTCAATCT+TGG | + | chr6.4:45640239-45640258 | MS.gene062683:intron | 25.0% |
! | AATATTAATGGCATACATGT+AGG | + | chr6.4:45639177-45639196 | MS.gene062683:intron | 25.0% |
! | ATGCAAGTAGAATTTCATTA+TGG | - | chr6.4:45639711-45639730 | None:intergenic | 25.0% |
! | GTCATCAATGTATGATAAAA+TGG | - | chr6.4:45640037-45640056 | None:intergenic | 25.0% |
! | TAATGAAATTCTACTTGCAT+TGG | + | chr6.4:45639711-45639730 | MS.gene062683:CDS | 25.0% |
! | TACAAGAGTTATGTTCAAAA+TGG | + | chr6.4:45638716-45638735 | MS.gene062683:CDS | 25.0% |
! | TGCAAGTAGAATTTCATTAT+GGG | - | chr6.4:45639710-45639729 | None:intergenic | 25.0% |
! | TTCAATCAAATAACTTCATG+AGG | - | chr6.4:45640792-45640811 | None:intergenic | 25.0% |
! | TTGAGTAAAACAAATTAGAC+AGG | + | chr6.4:45638887-45638906 | MS.gene062683:intron | 25.0% |
!! | AGACGAAATTAATCAAGTTT+TGG | + | chr6.4:45638685-45638704 | MS.gene062683:CDS | 25.0% |
!! | ATGACACTTAATTGTTGTTA+TGG | - | chr6.4:45638476-45638495 | None:intergenic | 25.0% |
!! | ATTGATTCAATATGTCGTTT+GGG | + | chr6.4:45638644-45638663 | MS.gene062683:CDS | 25.0% |
!! | GACATATATTAATGATTTGC+TGG | + | chr6.4:45641871-45641890 | MS.gene062683:CDS | 25.0% |
!! | GTAATATTTGACTTTGTCAT+GGG | + | chr6.4:45638952-45638971 | MS.gene062683:intron | 25.0% |
!! | TAAGTTGAGATATATATACC+AGG | - | chr6.4:45638821-45638840 | None:intergenic | 25.0% |
!! | TCTTTAATCTAGTTTAGAGT+TGG | + | chr6.4:45640195-45640214 | MS.gene062683:intron | 25.0% |
!! | TTTTTACTAAGGCAATTGAA+AGG | + | chr6.4:45640094-45640113 | MS.gene062683:CDS | 25.0% |
!! | TTTTTGTCTTTATATACAGG+TGG | + | chr6.4:45639878-45639897 | MS.gene062683:intron | 25.0% |
!!! | AACTCTTACTTCTTTTAAGA+AGG | - | chr6.4:45640503-45640522 | None:intergenic | 25.0% |
!!! | ACTCTTACTTCTTTTAAGAA+GGG | - | chr6.4:45640502-45640521 | None:intergenic | 25.0% |
!!! | CAATCAAAATGATTTTTAGG+TGG | + | chr6.4:45640356-45640375 | MS.gene062683:intron | 25.0% |
!!! | TGTATGTTTTGAATACATAC+AGG | + | chr6.4:45638520-45638539 | MS.gene062683:intron | 25.0% |
AAAAATATTGGAAGAGGCTT+TGG | + | chr6.4:45639534-45639553 | MS.gene062683:CDS | 30.0% | |
AAAAGAAAATTGACAACGCT+TGG | + | chr6.4:45641711-45641730 | MS.gene062683:CDS | 30.0% | |
AAACTGAGTTCATATAACCA+TGG | - | chr6.4:45641030-45641049 | None:intergenic | 30.0% | |
ATATTGGGGCTCAAAATATA+CGG | - | chr6.4:45639980-45639999 | None:intergenic | 30.0% | |
CACATATCAACAATATCAAG+TGG | + | chr6.4:45641340-45641359 | MS.gene062683:CDS | 30.0% | |
CATCAATCCTAATGAGAAAT+CGG | + | chr6.4:45638229-45638248 | MS.gene062683:CDS | 30.0% | |
GACAAAAGACATCTTTGATT+GGG | + | chr6.4:45641411-45641430 | MS.gene062683:CDS | 30.0% | |
GAGGGAATATGATATGAATA+GGG | + | chr6.4:45641667-45641686 | MS.gene062683:CDS | 30.0% | |
GGTTCATGGTGAAAAAATAT+TGG | + | chr6.4:45639522-45639541 | MS.gene062683:CDS | 30.0% | |
GTACTTGGAATGTTATATGA+GGG | + | chr6.4:45641649-45641668 | MS.gene062683:CDS | 30.0% | |
TAAAGCAACTTCATGTAATC+CGG | - | chr6.4:45640406-45640425 | None:intergenic | 30.0% | |
TAACTATATACCAACAACAG+AGG | + | chr6.4:45641309-45641328 | MS.gene062683:CDS | 30.0% | |
TGAGGGAATATGATATGAAT+AGG | + | chr6.4:45641666-45641685 | MS.gene062683:CDS | 30.0% | |
TGCAAAAAACTTATTGTCCA+TGG | + | chr6.4:45641010-45641029 | MS.gene062683:intron | 30.0% | |
TGGTGAAAAAATATTGGAAG+AGG | + | chr6.4:45639528-45639547 | MS.gene062683:CDS | 30.0% | |
TTTCCTTGCTTGAGAATATT+GGG | - | chr6.4:45639995-45640014 | None:intergenic | 30.0% | |
! | AAAGTATCACCATAATCACT+AGG | + | chr6.4:45640751-45640770 | MS.gene062683:intron | 30.0% |
! | CGTAATATTTGACTTTGTCA+TGG | + | chr6.4:45638951-45638970 | MS.gene062683:intron | 30.0% |
! | GATTGATTCAATATGTCGTT+TGG | + | chr6.4:45638643-45638662 | MS.gene062683:CDS | 30.0% |
! | GTTGCTTTATAAATCACTCT+TGG | + | chr6.4:45640417-45640436 | MS.gene062683:CDS | 30.0% |
! | TCATGAGGATACATTTTTCT+TGG | - | chr6.4:45640777-45640796 | None:intergenic | 30.0% |
! | TGGTTATCAAATGGAAGTAT+TGG | + | chr6.4:45640635-45640654 | MS.gene062683:intron | 30.0% |
! | TTTCTTTTGGCATTCTTGAA+TGG | - | chr6.4:45641699-45641718 | None:intergenic | 30.0% |
! | TTTTCCTTGCTTGAGAATAT+TGG | - | chr6.4:45639996-45640015 | None:intergenic | 30.0% |
! | TTTTGCTAAATGCAGTTCAT+AGG | + | chr6.4:45638445-45638464 | MS.gene062683:intron | 30.0% |
!! | AAGCGTTGTCAATTTTCTTT+TGG | - | chr6.4:45641712-45641731 | None:intergenic | 30.0% |
!! | CTCTTACTTCTTTTAAGAAG+GGG | - | chr6.4:45640501-45640520 | None:intergenic | 30.0% |
!! | GTGTTTCTGAAGTACAAAAA+AGG | - | chr6.4:45639220-45639239 | None:intergenic | 30.0% |
!!! | AATCAAGTTGACTTTTTCCA+AGG | - | chr6.4:45638627-45638646 | None:intergenic | 30.0% |
!!! | AGTAGTTGAATGTTGCTTTT+GGG | + | chr6.4:45639948-45639967 | MS.gene062683:CDS | 30.0% |
!!! | ATCAAGTTGACTTTTTCCAA+GGG | - | chr6.4:45638626-45638645 | None:intergenic | 30.0% |
AAACAGTTTGAGCAGAAAAG+AGG | + | chr6.4:45641614-45641633 | MS.gene062683:intron | 35.0% | |
AATCCAAGCTTATATGAGTG+AGG | + | chr6.4:45641270-45641289 | MS.gene062683:CDS | 35.0% | |
ACGACTTCTTACATTGGAAT+GGG | + | chr6.4:45641379-45641398 | MS.gene062683:CDS | 35.0% | |
AGATGTGTTCAACCAATTCA+AGG | + | chr6.4:45639420-45639439 | MS.gene062683:intron | 35.0% | |
AGGAAACTTCAGTGAAACAT+TGG | + | chr6.4:45639450-45639469 | MS.gene062683:CDS | 35.0% | |
CGACAAAAGACATCTTTGAT+TGG | + | chr6.4:45641410-45641429 | MS.gene062683:CDS | 35.0% | |
CGCTTGGAAAGATATAAATC+AGG | + | chr6.4:45641727-45641746 | MS.gene062683:CDS | 35.0% | |
CGTACTTGGAATGTTATATG+AGG | + | chr6.4:45641648-45641667 | MS.gene062683:CDS | 35.0% | |
GAGCAAGAAATGAAGAAAGA+AGG | + | chr6.4:45640457-45640476 | MS.gene062683:CDS | 35.0% | |
TACGACTTCTTACATTGGAA+TGG | + | chr6.4:45641378-45641397 | MS.gene062683:CDS | 35.0% | |
TAGGTGGGATATTAATTGCT+TGG | + | chr6.4:45640372-45640391 | MS.gene062683:intron | 35.0% | |
TCCTTATGCTTCAGAATCTA+TGG | + | chr6.4:45638307-45638326 | MS.gene062683:CDS | 35.0% | |
TGCAAATCCGATTTCTCATT+AGG | - | chr6.4:45638239-45638258 | None:intergenic | 35.0% | |
TTCCTTGCTTGAGAATATTG+GGG | - | chr6.4:45639994-45640013 | None:intergenic | 35.0% | |
TTGTCTTTATATACAGGTGG+TGG | + | chr6.4:45639881-45639900 | MS.gene062683:intron | 35.0% | |
TTTACTTGTGTTGCAAGAGA+AGG | - | chr6.4:45639604-45639623 | None:intergenic | 35.0% | |
! | GCAGCAGCATTAACAATTTT+TGG | - | chr6.4:45641448-45641467 | None:intergenic | 35.0% |
! | TCTACTTGCATTGGCAAAAT+TGG | + | chr6.4:45639720-45639739 | MS.gene062683:CDS | 35.0% |
! | TTCCAAATTCCTTTTGATGC+AGG | - | chr6.4:45639765-45639784 | None:intergenic | 35.0% |
! | TTTTCTTGGCCTAGTGATTA+TGG | - | chr6.4:45640763-45640782 | None:intergenic | 35.0% |
!! | ACCATAGATTCTGAAGCATA+AGG | - | chr6.4:45638311-45638330 | None:intergenic | 35.0% |
!! | ATTCTCTTGCTGTGCTATTT+AGG | + | chr6.4:45638765-45638784 | MS.gene062683:CDS | 35.0% |
!! | TTCTCTTGCTGTGCTATTTA+GGG | + | chr6.4:45638766-45638785 | MS.gene062683:CDS | 35.0% |
!! | TTCTTTTAAGAAGGGGTCAA+GGG | - | chr6.4:45640494-45640513 | None:intergenic | 35.0% |
!!! | GAGTAGTTGAATGTTGCTTT+TGG | + | chr6.4:45639947-45639966 | MS.gene062683:CDS | 35.0% |
AAAAAATCTCCCCAAACGCT+AGG | - | chr6.4:45638284-45638303 | None:intergenic | 40.0% | |
AAAAATCTCCCCAAACGCTA+GGG | - | chr6.4:45638283-45638302 | None:intergenic | 40.0% | |
AACATTGGTCGTAGATGTTG+AGG | + | chr6.4:45639465-45639484 | MS.gene062683:CDS | 40.0% | |
ACACACGTCAGAATAGGTAA+CGG | - | chr6.4:45641776-45641795 | None:intergenic | 40.0% | |
ACATTGGTCGTAGATGTTGA+GGG | + | chr6.4:45639466-45639485 | MS.gene062683:CDS | 40.0% | |
ACCATGAACCATCATATGTG+AGG | - | chr6.4:45639512-45639531 | None:intergenic | 40.0% | |
ACTACTCTATCTCGTGCATA+CGG | - | chr6.4:45639934-45639953 | None:intergenic | 40.0% | |
AGCCTGCATCAAAAGGAATT+TGG | + | chr6.4:45639760-45639779 | MS.gene062683:CDS | 40.0% | |
AGGACATGTTTCTTCGTACT+TGG | + | chr6.4:45641634-45641653 | MS.gene062683:CDS | 40.0% | |
ATAGCACAGCAAGAGAATGA+AGG | - | chr6.4:45638763-45638782 | None:intergenic | 40.0% | |
ATAGTTAGCATTCAGCCATC+TGG | - | chr6.4:45641296-45641315 | None:intergenic | 40.0% | |
CATGGACTTTATGTTTCACC+TGG | + | chr6.4:45638800-45638819 | MS.gene062683:CDS | 40.0% | |
CTCAAAAACAGAGAAACCCT+TGG | + | chr6.4:45638607-45638626 | MS.gene062683:CDS | 40.0% | |
GATAACTACACACACTCTGA+CGG | + | chr6.4:45641839-45641858 | MS.gene062683:CDS | 40.0% | |
GATGACACATACGATGCATA+TGG | + | chr6.4:45640051-45640070 | MS.gene062683:CDS | 40.0% | |
GGAACCTGATATGAATACTG+CGG | + | chr6.4:45638541-45638560 | MS.gene062683:intron | 40.0% | |
GGATGAATCTTGCTCATAGA+TGG | - | chr6.4:45639689-45639708 | None:intergenic | 40.0% | |
GTATGAAGCCTCACATATGA+TGG | + | chr6.4:45639501-45639520 | MS.gene062683:CDS | 40.0% | |
GTGGGATATTAATTGCTTGG+AGG | + | chr6.4:45640375-45640394 | MS.gene062683:CDS | 40.0% | |
TAATTGCTTGGAGGATCTTC+CGG | + | chr6.4:45640384-45640403 | MS.gene062683:CDS | 40.0% | |
TGCTATACATTGCAGGCTTA+GGG | + | chr6.4:45641465-45641484 | MS.gene062683:CDS | 40.0% | |
TTAGCGACCAAGATTGAAGA+TGG | - | chr6.4:45640249-45640268 | None:intergenic | 40.0% | |
TTGAGAACACACGTCAGAAT+AGG | - | chr6.4:45641782-45641801 | None:intergenic | 40.0% | |
TTGCAAGAGAAGGACTCAAT+CGG | - | chr6.4:45639594-45639613 | None:intergenic | 40.0% | |
TTGGCTACGACTTCTTACAT+TGG | + | chr6.4:45641373-45641392 | MS.gene062683:CDS | 40.0% | |
! | ATTCCTTTTGATGCAGGCTT+TGG | - | chr6.4:45639759-45639778 | None:intergenic | 40.0% |
!! | ATAGGTAACGGAACTTCAGT+TGG | - | chr6.4:45641764-45641783 | None:intergenic | 40.0% |
!! | CAATCTCTCGCGTTTTATTG+AGG | + | chr6.4:45641799-45641818 | MS.gene062683:CDS | 40.0% |
!! | CTTCTTTTAAGAAGGGGTCA+AGG | - | chr6.4:45640495-45640514 | None:intergenic | 40.0% |
!! | CTTTATATACAGGTGGTGGA+AGG | + | chr6.4:45639885-45639904 | MS.gene062683:intron | 40.0% |
AACCAATTCAAGGACGAGCA+AGG | + | chr6.4:45639430-45639449 | MS.gene062683:CDS | 45.0% | |
AAGAAGTCGTAGCCAACACT+GGG | - | chr6.4:45641369-45641388 | None:intergenic | 45.0% | |
AGATTTCCACCCTAGCGTTT+GGG | + | chr6.4:45638271-45638290 | MS.gene062683:CDS | 45.0% | |
AGCCCCAATATTCTCAAGCA+AGG | + | chr6.4:45639989-45640008 | MS.gene062683:CDS | 45.0% | |
ATCAAGTGGTTACCCAGTGT+TGG | + | chr6.4:45641354-45641373 | MS.gene062683:CDS | 45.0% | |
ATGCTGCTGCTATACATTGC+AGG | + | chr6.4:45641458-45641477 | MS.gene062683:CDS | 45.0% | |
CAAAAACTTGCCTAGGCTAG+TGG | + | chr6.4:45639648-45639667 | MS.gene062683:CDS | 45.0% | |
CTGCTATACATTGCAGGCTT+AGG | + | chr6.4:45641464-45641483 | MS.gene062683:CDS | 45.0% | |
CTTATATGAGTGAGGCCAGA+TGG | + | chr6.4:45641278-45641297 | MS.gene062683:CDS | 45.0% | |
GCCTCACATATGATGGTTCA+TGG | + | chr6.4:45639508-45639527 | MS.gene062683:CDS | 45.0% | |
GGATGAAATTGTGTCAAGCG+AGG | + | chr6.4:45641486-45641505 | MS.gene062683:CDS | 45.0% | |
TAAGAAGTCGTAGCCAACAC+TGG | - | chr6.4:45641370-45641389 | None:intergenic | 45.0% | |
TGCAAGAGAAGGACTCAATC+GGG | - | chr6.4:45639593-45639612 | None:intergenic | 45.0% | |
TGCATGTACTCCTCTGTTGT+TGG | - | chr6.4:45641322-45641341 | None:intergenic | 45.0% | |
TGGCCTCACTCATATAAGCT+TGG | - | chr6.4:45641276-45641295 | None:intergenic | 45.0% | |
TGTGCCGCAGTATTCATATC+AGG | - | chr6.4:45638548-45638567 | None:intergenic | 45.0% | |
TTCCTTGCTCGTCCTTGAAT+TGG | - | chr6.4:45639435-45639454 | None:intergenic | 45.0% | |
! | CTAGCCTAGGCAAGTTTTTG+CGG | - | chr6.4:45639648-45639667 | None:intergenic | 45.0% |
! | TAACTTCTTGCCACTAGCCT+AGG | - | chr6.4:45639661-45639680 | None:intergenic | 45.0% |
!! | CTGTGCTATTTAGGGTGTTG+AGG | + | chr6.4:45638774-45638793 | MS.gene062683:CDS | 45.0% |
!! | TTTAGGGTGTTGAGGCAACA+TGG | + | chr6.4:45638782-45638801 | MS.gene062683:CDS | 45.0% |
!!! | GAGGCTTTGGCTTTTACTTC+TGG | + | chr6.4:45639547-45639566 | MS.gene062683:CDS | 45.0% |
!!! | ATTTTATAATAATAAAAGAT+AGG | + | chr6.4:45639028-45639047 | MS.gene062683:intron | 5.0% |
AAGAGAAGGACTCAATCGGG+TGG | - | chr6.4:45639590-45639609 | None:intergenic | 50.0% | |
CAGATTTCCACCCTAGCGTT+TGG | + | chr6.4:45638270-45638289 | MS.gene062683:CDS | 50.0% | |
CTCTCCGCAAAAACTTGCCT+AGG | + | chr6.4:45639641-45639660 | MS.gene062683:CDS | 50.0% | |
GATTTCCACCCTAGCGTTTG+GGG | + | chr6.4:45638272-45638291 | MS.gene062683:CDS | 50.0% | |
GCTCCAAAGCCTGCATCAAA+AGG | + | chr6.4:45639753-45639772 | MS.gene062683:CDS | 50.0% | |
TTCTGGTCACCTTGAGTCGA+TGG | + | chr6.4:45639564-45639583 | MS.gene062683:CDS | 50.0% | |
!! | ATACAGGTGGTGGAAGGAGT+TGG | + | chr6.4:45639891-45639910 | MS.gene062683:intron | 50.0% |
AATCTCCCCAAACGCTAGGG+TGG | - | chr6.4:45638280-45638299 | None:intergenic | 55.0% | |
!! | ATCGGGTGGCCATCGACTCA+AGG | - | chr6.4:45639576-45639595 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 45638212 | 45641913 | 45638212 | ID=MS.gene062683 |
chr6.4 | mRNA | 45638212 | 45641913 | 45638212 | ID=MS.gene062683.t1;Parent=MS.gene062683 |
chr6.4 | exon | 45638212 | 45638328 | 45638212 | ID=MS.gene062683.t1.exon1;Parent=MS.gene062683.t1 |
chr6.4 | CDS | 45638212 | 45638328 | 45638212 | ID=cds.MS.gene062683.t1;Parent=MS.gene062683.t1 |
chr6.4 | exon | 45638542 | 45638821 | 45638542 | ID=MS.gene062683.t1.exon2;Parent=MS.gene062683.t1 |
chr6.4 | CDS | 45638542 | 45638821 | 45638542 | ID=cds.MS.gene062683.t1;Parent=MS.gene062683.t1 |
chr6.4 | exon | 45639422 | 45639794 | 45639422 | ID=MS.gene062683.t1.exon3;Parent=MS.gene062683.t1 |
chr6.4 | CDS | 45639422 | 45639794 | 45639422 | ID=cds.MS.gene062683.t1;Parent=MS.gene062683.t1 |
chr6.4 | exon | 45639897 | 45640115 | 45639897 | ID=MS.gene062683.t1.exon4;Parent=MS.gene062683.t1 |
chr6.4 | CDS | 45639897 | 45640115 | 45639897 | ID=cds.MS.gene062683.t1;Parent=MS.gene062683.t1 |
chr6.4 | exon | 45640375 | 45640513 | 45640375 | ID=MS.gene062683.t1.exon5;Parent=MS.gene062683.t1 |
chr6.4 | CDS | 45640375 | 45640513 | 45640375 | ID=cds.MS.gene062683.t1;Parent=MS.gene062683.t1 |
chr6.4 | exon | 45641259 | 45641507 | 45641259 | ID=MS.gene062683.t1.exon6;Parent=MS.gene062683.t1 |
chr6.4 | CDS | 45641259 | 45641507 | 45641259 | ID=cds.MS.gene062683.t1;Parent=MS.gene062683.t1 |
chr6.4 | exon | 45641620 | 45641913 | 45641620 | ID=MS.gene062683.t1.exon7;Parent=MS.gene062683.t1 |
chr6.4 | CDS | 45641620 | 45641913 | 45641620 | ID=cds.MS.gene062683.t1;Parent=MS.gene062683.t1 |
Gene Sequence |
Protein sequence |