Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062690.t1 | XP_004497487.1 | 70.8 | 517 | 151 | 0 | 1 | 517 | 40 | 556 | 7.20E-216 | 760 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062690.t1 | B9SCB6 | 51.2 | 514 | 245 | 3 | 1 | 514 | 42 | 549 | 8.8e-154 | 545.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062690.t1 | A0A1S2Y0Q7 | 70.8 | 517 | 151 | 0 | 1 | 517 | 40 | 556 | 5.2e-216 | 760.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene059265 | MS.gene062690 | 0.811883 | 5.60E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene062690 | MS.gene42723 | PPI |
MS.gene062690 | MS.gene069726 | PPI |
MS.gene062690 | MS.gene045736 | PPI |
MS.gene062690 | MS.gene038982 | PPI |
MS.gene038985 | MS.gene062690 | PPI |
MS.gene066310 | MS.gene062690 | PPI |
MS.gene062690 | MS.gene77594 | PPI |
MS.gene062690 | MS.gene066316 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062690.t1 | MTR_6g039440 | 69.439 | 517 | 158 | 0 | 1 | 517 | 37 | 553 | 0.0 | 759 |
MS.gene062690.t1 | MTR_5g062230 | 69.246 | 517 | 159 | 0 | 1 | 517 | 37 | 553 | 0.0 | 753 |
MS.gene062690.t1 | MTR_6g008560 | 67.375 | 518 | 168 | 1 | 1 | 517 | 40 | 557 | 0.0 | 745 |
MS.gene062690.t1 | MTR_3g464190 | 66.602 | 518 | 172 | 1 | 1 | 517 | 40 | 557 | 0.0 | 726 |
MS.gene062690.t1 | MTR_4g048460 | 66.731 | 517 | 172 | 0 | 1 | 517 | 45 | 561 | 0.0 | 719 |
MS.gene062690.t1 | MTR_5g073200 | 66.473 | 516 | 172 | 1 | 1 | 515 | 32 | 547 | 0.0 | 708 |
MS.gene062690.t1 | MTR_5g073260 | 64.933 | 519 | 180 | 2 | 1 | 517 | 34 | 552 | 0.0 | 697 |
MS.gene062690.t1 | MTR_5g094620 | 63.636 | 517 | 169 | 1 | 1 | 517 | 40 | 537 | 0.0 | 690 |
MS.gene062690.t1 | MTR_4g081460 | 59.491 | 511 | 205 | 1 | 9 | 517 | 52 | 562 | 0.0 | 642 |
MS.gene062690.t1 | MTR_6g008560 | 66.833 | 401 | 133 | 0 | 117 | 517 | 1 | 401 | 0.0 | 578 |
MS.gene062690.t1 | MTR_4g048460 | 66.190 | 420 | 142 | 0 | 1 | 420 | 45 | 464 | 0.0 | 573 |
MS.gene062690.t1 | MTR_8g007515 | 44.788 | 518 | 279 | 5 | 5 | 517 | 41 | 556 | 8.21e-162 | 471 |
MS.gene062690.t1 | MTR_2g081980 | 44.894 | 519 | 278 | 8 | 5 | 517 | 41 | 557 | 1.26e-159 | 466 |
MS.gene062690.t1 | MTR_2g082010 | 43.378 | 521 | 289 | 6 | 1 | 517 | 50 | 568 | 3.19e-159 | 465 |
MS.gene062690.t1 | MTR_2g082060 | 42.256 | 523 | 283 | 8 | 1 | 517 | 44 | 553 | 2.75e-148 | 436 |
MS.gene062690.t1 | MTR_4g019550 | 40.535 | 523 | 288 | 7 | 5 | 517 | 49 | 558 | 4.74e-135 | 402 |
MS.gene062690.t1 | MTR_2g082050 | 38.058 | 515 | 258 | 9 | 4 | 515 | 1 | 457 | 3.39e-123 | 369 |
MS.gene062690.t1 | MTR_4g045810 | 35.644 | 505 | 321 | 2 | 12 | 515 | 78 | 579 | 3.88e-111 | 342 |
MS.gene062690.t1 | MTR_2g089130 | 35.152 | 495 | 305 | 5 | 5 | 495 | 62 | 544 | 1.94e-103 | 322 |
MS.gene062690.t1 | MTR_2g064425 | 37.255 | 510 | 309 | 7 | 9 | 515 | 83 | 584 | 1.70e-102 | 320 |
MS.gene062690.t1 | MTR_2g089120 | 34.442 | 511 | 316 | 7 | 10 | 515 | 67 | 563 | 1.09e-101 | 317 |
MS.gene062690.t1 | MTR_8g057020 | 34.059 | 505 | 325 | 5 | 13 | 515 | 89 | 587 | 1.40e-94 | 299 |
MS.gene062690.t1 | MTR_2g065450 | 34.387 | 506 | 322 | 6 | 13 | 515 | 90 | 588 | 7.70e-93 | 295 |
MS.gene062690.t1 | MTR_2g064425 | 35.490 | 510 | 303 | 8 | 9 | 515 | 83 | 569 | 3.78e-92 | 292 |
MS.gene062690.t1 | MTR_4g092020 | 33.268 | 511 | 328 | 6 | 5 | 511 | 64 | 565 | 4.45e-89 | 284 |
MS.gene062690.t1 | MTR_7g057340 | 66.860 | 172 | 57 | 0 | 346 | 517 | 1 | 172 | 1.48e-84 | 259 |
MS.gene062690.t1 | MTR_2g064425 | 44.411 | 331 | 175 | 5 | 9 | 337 | 83 | 406 | 5.39e-83 | 265 |
MS.gene062690.t1 | MTR_4g092010 | 30.876 | 502 | 333 | 7 | 16 | 509 | 61 | 556 | 6.45e-82 | 266 |
MS.gene062690.t1 | MTR_7g010710 | 31.518 | 514 | 342 | 6 | 7 | 515 | 45 | 553 | 2.58e-80 | 261 |
MS.gene062690.t1 | MTR_7g057390 | 64.535 | 172 | 58 | 1 | 346 | 517 | 1 | 169 | 5.53e-78 | 242 |
MS.gene062690.t1 | MTR_5g094530 | 56.682 | 217 | 58 | 3 | 128 | 342 | 2 | 184 | 1.21e-74 | 234 |
MS.gene062690.t1 | MTR_2g064425 | 41.692 | 331 | 169 | 6 | 9 | 337 | 83 | 391 | 8.53e-73 | 238 |
MS.gene062690.t1 | MTR_2g010960 | 28.764 | 518 | 344 | 8 | 8 | 508 | 9 | 518 | 2.53e-71 | 236 |
MS.gene062690.t1 | MTR_6g064980 | 29.423 | 503 | 335 | 8 | 15 | 500 | 4 | 503 | 2.83e-69 | 231 |
MS.gene062690.t1 | MTR_3g465090 | 29.495 | 495 | 335 | 6 | 15 | 495 | 4 | 498 | 4.05e-69 | 231 |
MS.gene062690.t1 | MTR_3g063170 | 29.209 | 493 | 329 | 8 | 15 | 490 | 4 | 493 | 3.37e-68 | 228 |
MS.gene062690.t1 | MTR_3g063120 | 28.717 | 491 | 339 | 8 | 29 | 511 | 1 | 488 | 6.45e-67 | 224 |
MS.gene062690.t1 | MTR_3g052120 | 29.175 | 497 | 342 | 8 | 22 | 511 | 19 | 512 | 2.69e-65 | 220 |
MS.gene062690.t1 | MTR_3g063140 | 28.715 | 498 | 335 | 8 | 15 | 495 | 4 | 498 | 2.82e-65 | 220 |
MS.gene062690.t1 | MTR_7g050990 | 60.843 | 166 | 54 | 2 | 160 | 325 | 27 | 181 | 2.92e-58 | 208 |
MS.gene062690.t1 | MTR_6g065040 | 29.032 | 403 | 275 | 6 | 106 | 500 | 2 | 401 | 1.72e-55 | 191 |
MS.gene062690.t1 | MTR_3g015080 | 47.674 | 172 | 52 | 2 | 346 | 517 | 1 | 134 | 1.82e-46 | 159 |
MS.gene062690.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 31 | 515 | 65 | 569 | 3.03e-36 | 142 |
MS.gene062690.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 31 | 515 | 256 | 760 | 9.24e-36 | 142 |
MS.gene062690.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 31 | 515 | 269 | 773 | 1.04e-35 | 142 |
MS.gene062690.t1 | MTR_3g058160 | 25.241 | 519 | 340 | 15 | 31 | 515 | 276 | 780 | 1.12e-35 | 142 |
MS.gene062690.t1 | MTR_3g063160 | 30.769 | 286 | 186 | 5 | 15 | 289 | 4 | 288 | 1.19e-35 | 135 |
MS.gene062690.t1 | MTR_2g064295 | 24.138 | 522 | 342 | 16 | 31 | 515 | 256 | 760 | 3.09e-34 | 137 |
MS.gene062690.t1 | MTR_3g058160 | 24.815 | 540 | 337 | 16 | 31 | 515 | 276 | 801 | 3.52e-33 | 134 |
MS.gene062690.t1 | MTR_2g012870 | 23.772 | 509 | 356 | 14 | 31 | 515 | 254 | 754 | 3.20e-29 | 122 |
MS.gene062690.t1 | MTR_2g012900 | 24.342 | 456 | 300 | 15 | 29 | 447 | 252 | 699 | 2.05e-26 | 114 |
MS.gene062690.t1 | MTR_7g094970 | 27.273 | 275 | 168 | 6 | 29 | 274 | 206 | 477 | 2.92e-23 | 103 |
MS.gene062690.t1 | MTR_7g011663 | 29.927 | 274 | 160 | 6 | 29 | 271 | 344 | 616 | 5.64e-23 | 103 |
MS.gene062690.t1 | MTR_5g030050 | 28.030 | 264 | 157 | 7 | 34 | 273 | 3 | 257 | 3.89e-20 | 91.7 |
MS.gene062690.t1 | MTR_7g011770 | 27.986 | 293 | 182 | 7 | 29 | 293 | 240 | 531 | 1.03e-19 | 93.2 |
MS.gene062690.t1 | MTR_5g081730 | 36.364 | 110 | 65 | 1 | 114 | 218 | 2 | 111 | 7.01e-13 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062690.t1 | AT5G23960 | 40.079 | 509 | 297 | 4 | 13 | 517 | 41 | 545 | 2.94e-141 | 418 |
MS.gene062690.t1 | AT5G23960 | 40.039 | 512 | 295 | 6 | 13 | 517 | 41 | 547 | 2.30e-140 | 416 |
MS.gene062690.t1 | AT1G70080 | 38.012 | 513 | 309 | 6 | 9 | 513 | 96 | 607 | 5.31e-125 | 379 |
MS.gene062690.t1 | AT3G14490 | 38.356 | 511 | 305 | 5 | 13 | 517 | 95 | 601 | 1.86e-121 | 369 |
MS.gene062690.t1 | AT3G14520 | 35.922 | 515 | 321 | 4 | 9 | 517 | 93 | 604 | 2.02e-118 | 361 |
MS.gene062690.t1 | AT1G31950 | 35.484 | 527 | 324 | 5 | 4 | 517 | 84 | 607 | 4.98e-117 | 358 |
MS.gene062690.t1 | AT3G14540 | 36.381 | 514 | 320 | 3 | 9 | 517 | 90 | 601 | 1.51e-116 | 357 |
MS.gene062690.t1 | AT1G31950 | 35.922 | 515 | 321 | 4 | 9 | 517 | 95 | 606 | 1.78e-116 | 357 |
MS.gene062690.t1 | AT3G29410 | 36.292 | 507 | 319 | 3 | 13 | 517 | 99 | 603 | 2.84e-114 | 350 |
MS.gene062690.t1 | AT5G44630 | 35.907 | 518 | 316 | 6 | 9 | 515 | 43 | 555 | 6.08e-114 | 348 |
MS.gene062690.t1 | AT3G29410 | 36.327 | 490 | 308 | 3 | 30 | 517 | 11 | 498 | 4.12e-113 | 344 |
MS.gene062690.t1 | AT4G20200 | 35.328 | 518 | 321 | 8 | 9 | 517 | 92 | 604 | 3.06e-111 | 343 |
MS.gene062690.t1 | AT1G33750 | 34.961 | 512 | 328 | 3 | 8 | 517 | 95 | 603 | 4.34e-111 | 342 |
MS.gene062690.t1 | AT4G20210 | 34.429 | 517 | 327 | 6 | 9 | 517 | 88 | 600 | 1.09e-110 | 341 |
MS.gene062690.t1 | AT4G13300 | 34.884 | 516 | 326 | 6 | 9 | 517 | 42 | 554 | 6.12e-108 | 333 |
MS.gene062690.t1 | AT4G15870 | 34.733 | 524 | 318 | 8 | 3 | 517 | 90 | 598 | 6.11e-107 | 332 |
MS.gene062690.t1 | AT3G32030 | 33.792 | 509 | 331 | 4 | 13 | 517 | 98 | 604 | 1.38e-106 | 331 |
MS.gene062690.t1 | AT3G29190 | 33.333 | 519 | 330 | 7 | 9 | 517 | 89 | 601 | 1.54e-105 | 328 |
MS.gene062690.t1 | AT4G13280 | 34.302 | 516 | 329 | 6 | 9 | 517 | 42 | 554 | 6.65e-103 | 320 |
MS.gene062690.t1 | AT4G20230 | 33.658 | 514 | 328 | 7 | 9 | 513 | 104 | 613 | 6.87e-102 | 319 |
MS.gene062690.t1 | AT4G20230 | 33.658 | 514 | 328 | 7 | 9 | 513 | 92 | 601 | 7.68e-102 | 318 |
MS.gene062690.t1 | AT1G31950 | 36.425 | 442 | 265 | 5 | 4 | 432 | 84 | 522 | 3.87e-99 | 309 |
MS.gene062690.t1 | AT3G14540 | 37.857 | 420 | 255 | 2 | 9 | 424 | 90 | 507 | 5.35e-99 | 308 |
MS.gene062690.t1 | AT2G23230 | 34.170 | 518 | 327 | 8 | 9 | 516 | 86 | 599 | 1.42e-98 | 310 |
MS.gene062690.t1 | AT3G29110 | 34.698 | 513 | 323 | 7 | 9 | 513 | 85 | 593 | 1.54e-98 | 310 |
MS.gene062690.t1 | AT1G66020 | 33.464 | 511 | 332 | 5 | 9 | 513 | 86 | 594 | 2.09e-97 | 307 |
MS.gene062690.t1 | AT2G23230 | 33.977 | 518 | 323 | 9 | 9 | 516 | 86 | 594 | 5.60e-96 | 303 |
MS.gene062690.t1 | AT4G16730 | 32.075 | 530 | 338 | 9 | 3 | 517 | 17 | 539 | 8.06e-95 | 298 |
MS.gene062690.t1 | AT1G48800 | 32.495 | 517 | 330 | 9 | 9 | 513 | 93 | 602 | 1.53e-93 | 297 |
MS.gene062690.t1 | AT4G16730 | 32.465 | 499 | 316 | 8 | 34 | 517 | 1 | 493 | 1.69e-92 | 291 |
MS.gene062690.t1 | AT4G13280 | 33.333 | 516 | 304 | 8 | 9 | 517 | 42 | 524 | 5.50e-91 | 288 |
MS.gene062690.t1 | AT1G61680 | 32.530 | 498 | 324 | 4 | 16 | 507 | 78 | 569 | 8.32e-89 | 283 |
MS.gene062690.t1 | AT4G16740 | 33.013 | 521 | 325 | 11 | 9 | 517 | 56 | 564 | 7.18e-86 | 276 |
MS.gene062690.t1 | AT5G48110 | 37.901 | 343 | 208 | 5 | 176 | 517 | 1 | 339 | 1.38e-85 | 268 |
MS.gene062690.t1 | AT1G61680 | 32.129 | 498 | 319 | 5 | 16 | 507 | 78 | 562 | 2.91e-85 | 274 |
MS.gene062690.t1 | AT2G24210 | 32.308 | 520 | 332 | 10 | 11 | 517 | 78 | 590 | 5.30e-85 | 274 |
MS.gene062690.t1 | AT3G25810 | 30.859 | 512 | 331 | 9 | 23 | 517 | 92 | 597 | 7.38e-81 | 263 |
MS.gene062690.t1 | AT1G48820 | 31.299 | 508 | 300 | 10 | 9 | 510 | 93 | 557 | 2.27e-80 | 261 |
MS.gene062690.t1 | AT3G25830 | 30.710 | 521 | 342 | 11 | 11 | 517 | 79 | 594 | 3.67e-78 | 256 |
MS.gene062690.t1 | AT3G25820 | 30.710 | 521 | 342 | 11 | 11 | 517 | 79 | 594 | 3.67e-78 | 256 |
MS.gene062690.t1 | AT1G66020 | 36.095 | 338 | 208 | 5 | 9 | 340 | 86 | 421 | 5.73e-67 | 222 |
MS.gene062690.t1 | AT4G16740 | 35.920 | 348 | 205 | 6 | 5 | 342 | 52 | 391 | 1.10e-65 | 218 |
MS.gene062690.t1 | AT3G25820 | 33.333 | 348 | 220 | 7 | 11 | 350 | 79 | 422 | 2.42e-59 | 202 |
MS.gene062690.t1 | AT4G16740 | 36.027 | 297 | 173 | 5 | 5 | 291 | 52 | 341 | 2.34e-54 | 187 |
MS.gene062690.t1 | AT4G16740 | 36.027 | 297 | 173 | 5 | 5 | 291 | 52 | 341 | 2.34e-54 | 187 |
MS.gene062690.t1 | AT3G25820 | 34.028 | 288 | 180 | 5 | 11 | 291 | 79 | 363 | 5.12e-51 | 179 |
MS.gene062690.t1 | AT3G25820 | 34.028 | 288 | 180 | 5 | 11 | 291 | 79 | 363 | 5.12e-51 | 179 |
MS.gene062690.t1 | AT1G79460 | 25.243 | 515 | 332 | 19 | 31 | 507 | 274 | 773 | 4.70e-31 | 128 |
MS.gene062690.t1 | AT1G61120 | 23.242 | 512 | 357 | 10 | 29 | 517 | 286 | 784 | 2.40e-25 | 110 |
MS.gene062690.t1 | AT4G02780 | 28.462 | 260 | 158 | 5 | 29 | 261 | 329 | 587 | 1.66e-22 | 102 |
Find 85 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCTCTTGCTGTGCTATTT+AGG | 0.103456 | 6.4:+45499677 | MS.gene062690:CDS |
TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6.4:+45500638 | MS.gene062690:CDS |
TTCTCTTGCTGTGCTATTTA+GGG | 0.189824 | 6.4:+45499678 | MS.gene062690:CDS |
TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6.4:-45500910 | None:intergenic |
ATGCAAGTAGAATTTCATTA+TGG | 0.248221 | 6.4:-45500626 | None:intergenic |
TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6.4:+45499628 | MS.gene062690:CDS |
CTGCTATACATTGCAGGCTT+AGG | 0.276774 | 6.4:+45502381 | MS.gene062690:CDS |
AGCCTGCATCAAAAGGAATT+TGG | 0.290423 | 6.4:+45500678 | MS.gene062690:CDS |
AGACGAAATTAATCAAGTTT+TGG | 0.301364 | 6.4:+45499597 | MS.gene062690:CDS |
GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6.4:-45500952 | None:intergenic |
TAATTGCCTGGAGGATCTTC+CGG | 0.335446 | 6.4:+45501302 | MS.gene062690:CDS |
TGAGGGAATATGATATGAAT+AGG | 0.340079 | 6.4:+45502583 | MS.gene062690:CDS |
TTCCTTGCTCGTCCTTGAAT+TGG | 0.345275 | 6.4:-45500350 | None:intergenic |
GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6.4:+45500865 | MS.gene062690:CDS |
ATGCTGCTGCTATACATTGC+AGG | 0.354080 | 6.4:+45502375 | MS.gene062690:CDS |
TGTGCCGCAGTATTCATATC+AGG | 0.354426 | 6.4:-45499457 | None:intergenic |
AGGACATGTTTCTTCGTACT+TGG | 0.361077 | 6.4:+45502551 | MS.gene062690:CDS |
TGCAAGTAGAATTTCATTAT+GGG | 0.387262 | 6.4:-45500625 | None:intergenic |
CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6.4:+45502565 | MS.gene062690:CDS |
GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6.4:-45500604 | None:intergenic |
GATTGACTCAATATGTCGTT+TGG | 0.390339 | 6.4:+45499555 | MS.gene062690:CDS |
CGACAAAAGACATCTTTGAT+TGG | 0.390521 | 6.4:+45502327 | MS.gene062690:CDS |
GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6.4:+45501335 | MS.gene062690:CDS |
TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6.4:-45502236 | None:intergenic |
TAAAGCAACTTCATGTAATC+CGG | 0.421098 | 6.4:-45501321 | None:intergenic |
ATAAATACTCAAATTTCTAA+AGG | 0.433133 | 6.4:-45502816 | None:intergenic |
GCCTCACATATGACGGTTCA+TGG | 0.441110 | 6.4:+45500426 | MS.gene062690:CDS |
GACAAAAGACATCTTTGATT+GGG | 0.442878 | 6.4:+45502328 | MS.gene062690:CDS |
AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6.4:+45502628 | MS.gene062690:CDS |
TGCTATACATTGCAGGCTTA+GGG | 0.448464 | 6.4:+45502382 | MS.gene062690:CDS |
TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6.4:+45502295 | MS.gene062690:CDS |
AATTTCGTCTTCAAAATGAT+AGG | 0.458833 | 6.4:-45499584 | None:intergenic |
ATAGTTAGCATTCAGCCATC+TGG | 0.458951 | 6.4:-45502210 | None:intergenic |
TAATGAAATTCTACTTGCAT+TGG | 0.460272 | 6.4:+45500629 | MS.gene062690:CDS |
ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6.4:+45502296 | MS.gene062690:CDS |
GCTCCAAAGCCTGCATCAAA+AGG | 0.461740 | 6.4:+45500671 | MS.gene062690:CDS |
GATGACACATATGATGCATA+TGG | 0.467097 | 6.4:+45500969 | MS.gene062690:CDS |
GAGCAAGAAATGAAGAAAGA+AGG | 0.470516 | 6.4:+45501375 | MS.gene062690:CDS |
TAGGTGGGATATTAATTGCC+TGG | 0.473504 | 6.4:+45501290 | MS.gene062690:intron |
ATTGACTCAATATGTCGTTT+GGG | 0.473862 | 6.4:+45499556 | MS.gene062690:CDS |
GAGGGAATATGATATGAATA+GGG | 0.475500 | 6.4:+45502584 | MS.gene062690:CDS |
TTGCAAGAGAAGGACTCAAT+CGG | 0.484754 | 6.4:-45500509 | None:intergenic |
CGCTTGGAAAGATATAAATC+AGG | 0.490061 | 6.4:+45502644 | MS.gene062690:CDS |
TTCTGGTCACCTTGAGTCGA+TGG | 0.501829 | 6.4:+45500482 | MS.gene062690:CDS |
CTGTGCTATTTAGGGTGTTG+AGG | 0.502767 | 6.4:+45499686 | MS.gene062690:CDS |
TTGAGAACACACGTCAGAAT+AGG | 0.502783 | 6.4:-45502696 | None:intergenic |
CATGGACTTTACGTTTCACC+TGG | 0.512238 | 6.4:+45499712 | MS.gene062690:CDS |
ATACAGGTGGTGGAAGGAGT+TGG | 0.512387 | 6.4:+45500809 | MS.gene062690:intron |
TTAACATGCCCTCAACATCT+AGG | 0.512692 | 6.4:-45500392 | None:intergenic |
AGATGTGTTCAACCAATTCA+AGG | 0.513117 | 6.4:+45500338 | MS.gene062690:intron |
TAACTTCTTGCCACTAGCCT+AGG | 0.521919 | 6.4:-45500576 | None:intergenic |
TAAGAAGTCGTAGCCAACAC+TGG | 0.522936 | 6.4:-45502284 | None:intergenic |
TGGCCTCACTCATATAAGCT+TGG | 0.531321 | 6.4:-45502190 | None:intergenic |
TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6.4:-45500909 | None:intergenic |
AACATTGGTCCTAGATGTTG+AGG | 0.536563 | 6.4:+45500383 | MS.gene062690:CDS |
ATAGGTAACGGAACTTCAGT+TGG | 0.538099 | 6.4:-45502678 | None:intergenic |
AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6.4:+45502531 | MS.gene062690:intron |
TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6.4:-45500508 | None:intergenic |
AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6.4:+45500907 | MS.gene062690:CDS |
CTTATATGAGTGAGGCCAGA+TGG | 0.549142 | 6.4:+45502195 | MS.gene062690:CDS |
TTTAGGGTGTTGAGGCAACA+TGG | 0.552007 | 6.4:+45499694 | MS.gene062690:CDS |
TTTACTTGTGTTGCAAGAGA+AGG | 0.558925 | 6.4:-45500519 | None:intergenic |
ATCGGGTGGCCATCGACTCA+AGG | 0.563910 | 6.4:-45500491 | None:intergenic |
TGTAATCCGGAAGATCCTCC+AGG | 0.566106 | 6.4:-45501308 | None:intergenic |
GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6.4:+45502566 | MS.gene062690:CDS |
ATCAAGTGGTTACCCAGTGT+TGG | 0.570889 | 6.4:+45502271 | MS.gene062690:CDS |
ATAGCACAGCAAGAGAATGA+AGG | 0.572946 | 6.4:-45499672 | None:intergenic |
CTTTATATACAGGTGGTGGA+AGG | 0.574461 | 6.4:+45500803 | MS.gene062690:intron |
AGGAAACTTCAGTGAAACAT+TGG | 0.576091 | 6.4:+45500368 | MS.gene062690:CDS |
TTGGCTACGACTTCTTACAT+TGG | 0.586299 | 6.4:+45502290 | MS.gene062690:CDS |
ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6.4:-45500849 | None:intergenic |
CACATATCAACAATATCAAG+TGG | 0.594145 | 6.4:+45502257 | MS.gene062690:CDS |
GATAACTACACACACTCTGA+CGG | 0.610210 | 6.4:+45502756 | MS.gene062690:CDS |
ACCATGAACCGTCATATGTG+AGG | 0.611383 | 6.4:-45500427 | None:intergenic |
AAGAAGTCGTAGCCAACACT+GGG | 0.613680 | 6.4:-45502283 | None:intergenic |
AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6.4:+45500348 | MS.gene062690:CDS |
ACATTGGTCCTAGATGTTGA+GGG | 0.639888 | 6.4:+45500384 | MS.gene062690:CDS |
AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6.4:+45502187 | MS.gene062690:CDS |
GGATGAAATTGTGTCAAGCG+AGG | 0.666273 | 6.4:+45502403 | MS.gene062690:CDS |
GTATGAAGCCTCACATATGA+CGG | 0.667235 | 6.4:+45500419 | MS.gene062690:CDS |
ACACACGTCAGAATAGGTAA+CGG | 0.688917 | 6.4:-45502690 | None:intergenic |
AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6.4:-45500505 | None:intergenic |
GGAACCTGATATGAATACTG+CGG | 0.696636 | 6.4:+45499453 | None:intergenic |
GTGGGATATTAATTGCCTGG+AGG | 0.699903 | 6.4:+45501293 | MS.gene062690:CDS |
TAACTATATACCAACAACAG+AGG | 0.703519 | 6.4:+45502226 | MS.gene062690:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATATAAAATAAATGTTAAT+AGG | - | chr6.4:45502141-45502160 | None:intergenic | 10.0% |
!! | GAAAAAAAATTACATAAAAT+AGG | + | chr6.4:45499963-45499982 | MS.gene062690:intron | 10.0% |
!! | TGATTATAAAGTAATATTAA+TGG | + | chr6.4:45500079-45500098 | MS.gene062690:intron | 10.0% |
!!! | AATTTCATTTAAATTTTTTG+TGG | + | chr6.4:45501533-45501552 | MS.gene062690:intron | 10.0% |
!!! | CATTTTTTATGTTTTTAATT+TGG | + | chr6.4:45499768-45499787 | MS.gene062690:intron | 10.0% |
!!! | CTATTAACATTTATTTTATA+TGG | + | chr6.4:45502139-45502158 | MS.gene062690:intron | 10.0% |
!!! | TAATTACATAGTTTTTTTTT+TGG | + | chr6.4:45502108-45502127 | MS.gene062690:intron | 10.0% |
!! | TATAAAGACAAAAATAGTAT+AGG | - | chr6.4:45500790-45500809 | None:intergenic | 15.0% |
!! | TATTATGAATGTCTAAAAAA+TGG | + | chr6.4:45499894-45499913 | MS.gene062690:intron | 15.0% |
!! | TCATAGAATTAATATTACAA+AGG | - | chr6.4:45502014-45502033 | None:intergenic | 15.0% |
!!! | AAACATTTTTACATCATTTT+AGG | + | chr6.4:45501634-45501653 | MS.gene062690:intron | 15.0% |
!!! | ATTGTTGTTTAATATTATTG+TGG | + | chr6.4:45500297-45500316 | MS.gene062690:intron | 15.0% |
!! | AAAAAAGGTTCTTACTTAAT+AGG | - | chr6.4:45500119-45500138 | None:intergenic | 20.0% |
!! | AATTGATAAACTAAAAACGA+AGG | + | chr6.4:45499480-45499499 | MS.gene062690:CDS | 20.0% |
!! | TGTAAAAAACTTATTATCCA+TGG | + | chr6.4:45501772-45501791 | MS.gene062690:intron | 20.0% |
!! | TTGAGTAAAACAAATTAGAT+TGG | + | chr6.4:45499799-45499818 | MS.gene062690:intron | 20.0% |
!!! | AATCAAAATGATTTTTAGGT+GGG | + | chr6.4:45501275-45501294 | MS.gene062690:intron | 20.0% |
!!! | AATTCTCTTTTTACTAAAAG+TGG | - | chr6.4:45499924-45499943 | None:intergenic | 20.0% |
!!! | AATTTTTTGTGGTTATCAAA+TGG | + | chr6.4:45501544-45501563 | MS.gene062690:intron | 20.0% |
!!! | CTATTTTTGTCTTTATATAC+AGG | + | chr6.4:45500793-45500812 | MS.gene062690:intron | 20.0% |
!!! | TATCTTGACATTTTAATTAC+TGG | + | chr6.4:45502040-45502059 | MS.gene062690:intron | 20.0% |
!!! | TATTGTTTATCTCTAAAGTT+TGG | - | chr6.4:45501084-45501103 | None:intergenic | 20.0% |
!!! | TGAATTAGAACTTTTTACTA+AGG | + | chr6.4:45501001-45501020 | MS.gene062690:CDS | 20.0% |
!!! | TGATTCTTTTAATAGAGTAA+TGG | + | chr6.4:45501242-45501261 | MS.gene062690:intron | 20.0% |
!!! | TTGCAATCAAAATGATTTTT+AGG | + | chr6.4:45501271-45501290 | MS.gene062690:intron | 20.0% |
! | AACTCAGTTAATAAAATCCA+TGG | - | chr6.4:45501792-45501811 | None:intergenic | 25.0% |
! | AATATATCCATCTTCAATCT+TGG | + | chr6.4:45501157-45501176 | MS.gene062690:intron | 25.0% |
! | AATATTAATGGCATACATGT+AGG | + | chr6.4:45500091-45500110 | MS.gene062690:intron | 25.0% |
! | AATTTCGTCTTCAAAATGAT+AGG | - | chr6.4:45499587-45499606 | None:intergenic | 25.0% |
! | ATGCAAGTAGAATTTCATTA+TGG | - | chr6.4:45500629-45500648 | None:intergenic | 25.0% |
! | GAGAATAATTAAAAGAGATG+AGG | - | chr6.4:45500016-45500035 | None:intergenic | 25.0% |
! | GTCATCAATGTATGATAAAA+TGG | - | chr6.4:45500955-45500974 | None:intergenic | 25.0% |
! | TAATGAAATTCTACTTGCAT+TGG | + | chr6.4:45500629-45500648 | MS.gene062690:CDS | 25.0% |
! | TACAAGAGTTATGTTCAAAA+TGG | + | chr6.4:45499628-45499647 | MS.gene062690:CDS | 25.0% |
! | TGCAAGTAGAATTTCATTAT+GGG | - | chr6.4:45500628-45500647 | None:intergenic | 25.0% |
! | TTCAATCAAATAACTTCATG+AGG | - | chr6.4:45501710-45501729 | None:intergenic | 25.0% |
!! | AGACGAAATTAATCAAGTTT+TGG | + | chr6.4:45499597-45499616 | MS.gene062690:CDS | 25.0% |
!! | GTAATATTTGACTTTGTCAT+GGG | + | chr6.4:45499865-45499884 | MS.gene062690:intron | 25.0% |
!! | TAAGTTGAGATATATATACC+AGG | - | chr6.4:45499733-45499752 | None:intergenic | 25.0% |
!! | TCTTTAATCTAGTTTAGAGT+TGG | + | chr6.4:45501113-45501132 | MS.gene062690:intron | 25.0% |
!! | TTTTTACTAAGGCAATTGAA+AGG | + | chr6.4:45501012-45501031 | MS.gene062690:CDS | 25.0% |
!! | TTTTTGTCTTTATATACAGG+TGG | + | chr6.4:45500796-45500815 | MS.gene062690:intron | 25.0% |
!!! | AACTCTTACTTCTTTTAAGA+AGG | - | chr6.4:45501421-45501440 | None:intergenic | 25.0% |
!!! | ACTCTTACTTCTTTTAAGAA+GGG | - | chr6.4:45501420-45501439 | None:intergenic | 25.0% |
!!! | CAATCAAAATGATTTTTAGG+TGG | + | chr6.4:45501274-45501293 | MS.gene062690:intron | 25.0% |
AAAAGAAAATTGACAACGCT+TGG | + | chr6.4:45502628-45502647 | MS.gene062690:CDS | 30.0% | |
AAACTGAGTTCATATAACCA+TGG | - | chr6.4:45501948-45501967 | None:intergenic | 30.0% | |
CACATATCAACAATATCAAG+TGG | + | chr6.4:45502257-45502276 | MS.gene062690:CDS | 30.0% | |
GACAAAAGACATCTTTGATT+GGG | + | chr6.4:45502328-45502347 | MS.gene062690:CDS | 30.0% | |
GAGGGAATATGATATGAATA+GGG | + | chr6.4:45502584-45502603 | MS.gene062690:CDS | 30.0% | |
GGTTCATGGTGAAAAAATAT+TGG | + | chr6.4:45500440-45500459 | MS.gene062690:CDS | 30.0% | |
GTACTTGGAATGTTATATGA+GGG | + | chr6.4:45502566-45502585 | MS.gene062690:CDS | 30.0% | |
TAAAGCAACTTCATGTAATC+CGG | - | chr6.4:45501324-45501343 | None:intergenic | 30.0% | |
TAACTATATACCAACAACAG+AGG | + | chr6.4:45502226-45502245 | MS.gene062690:CDS | 30.0% | |
TGAGGGAATATGATATGAAT+AGG | + | chr6.4:45502583-45502602 | MS.gene062690:CDS | 30.0% | |
TGCAAAAAACTTATTGTCCA+TGG | + | chr6.4:45501928-45501947 | MS.gene062690:intron | 30.0% | |
TGGTGAAAAAATATTGGAAG+AGG | + | chr6.4:45500446-45500465 | MS.gene062690:CDS | 30.0% | |
TGGTTATCAAATGGAAGTTT+AGG | + | chr6.4:45501553-45501572 | MS.gene062690:intron | 30.0% | |
TTTCCTTGCTTGAGAATATT+GGG | - | chr6.4:45500913-45500932 | None:intergenic | 30.0% | |
! | AAAGTATCACCATAATCACT+TGG | + | chr6.4:45501669-45501688 | MS.gene062690:intron | 30.0% |
! | ATTGACTCAATATGTCGTTT+GGG | + | chr6.4:45499556-45499575 | MS.gene062690:CDS | 30.0% |
! | CGTAATATTTGACTTTGTCA+TGG | + | chr6.4:45499864-45499883 | MS.gene062690:intron | 30.0% |
! | GTTGCTTTATAAATCACTCT+TGG | + | chr6.4:45501335-45501354 | MS.gene062690:CDS | 30.0% |
! | TCATGAGGATACATTTTTCT+TGG | - | chr6.4:45501695-45501714 | None:intergenic | 30.0% |
! | TTTCTTTTGGCATTCTTGAA+TGG | - | chr6.4:45502616-45502635 | None:intergenic | 30.0% |
! | TTTTCCTTGCTTGAGAATAT+TGG | - | chr6.4:45500914-45500933 | None:intergenic | 30.0% |
!! | AAGCGTTGTCAATTTTCTTT+TGG | - | chr6.4:45502629-45502648 | None:intergenic | 30.0% |
!! | CTCTTACTTCTTTTAAGAAG+GGG | - | chr6.4:45501419-45501438 | None:intergenic | 30.0% |
!! | GTGTTTCTGAAGTACAAAAA+AGG | - | chr6.4:45500134-45500153 | None:intergenic | 30.0% |
!!! | AATCAAGTTGACTTTTTCCA+AGG | - | chr6.4:45499539-45499558 | None:intergenic | 30.0% |
!!! | AGTAGTAGAATGTTGCTTTT+GGG | + | chr6.4:45500866-45500885 | MS.gene062690:CDS | 30.0% |
!!! | ATCAAGTTGACTTTTTCCAA+GGG | - | chr6.4:45499538-45499557 | None:intergenic | 30.0% |
AAACAGTTTGAGCAGAAAAG+AGG | + | chr6.4:45502531-45502550 | MS.gene062690:intron | 35.0% | |
AATCCAAGCTTATATGAGTG+AGG | + | chr6.4:45502187-45502206 | MS.gene062690:CDS | 35.0% | |
ACGACTTCTTACATTGGAAT+GGG | + | chr6.4:45502296-45502315 | MS.gene062690:CDS | 35.0% | |
AGATGTGTTCAACCAATTCA+AGG | + | chr6.4:45500338-45500357 | MS.gene062690:intron | 35.0% | |
AGGAAACTTCAGTGAAACAT+TGG | + | chr6.4:45500368-45500387 | MS.gene062690:CDS | 35.0% | |
CGACAAAAGACATCTTTGAT+TGG | + | chr6.4:45502327-45502346 | MS.gene062690:CDS | 35.0% | |
CGCTTGGAAAGATATAAATC+AGG | + | chr6.4:45502644-45502663 | MS.gene062690:CDS | 35.0% | |
CGTACTTGGAATGTTATATG+AGG | + | chr6.4:45502565-45502584 | MS.gene062690:CDS | 35.0% | |
CTTAAAAACAGAGAAACCCT+TGG | + | chr6.4:45499519-45499538 | MS.gene062690:CDS | 35.0% | |
GAGCAAGAAATGAAGAAAGA+AGG | + | chr6.4:45501375-45501394 | MS.gene062690:CDS | 35.0% | |
GATGACACATATGATGCATA+TGG | + | chr6.4:45500969-45500988 | MS.gene062690:CDS | 35.0% | |
TACGACTTCTTACATTGGAA+TGG | + | chr6.4:45502295-45502314 | MS.gene062690:CDS | 35.0% | |
TTCCTTGCTTGAGAATATTG+GGG | - | chr6.4:45500912-45500931 | None:intergenic | 35.0% | |
TTGTCTTTATATACAGGTGG+TGG | + | chr6.4:45500799-45500818 | MS.gene062690:intron | 35.0% | |
TTTACTTGTGTTGCAAGAGA+AGG | - | chr6.4:45500522-45500541 | None:intergenic | 35.0% | |
! | GATTGACTCAATATGTCGTT+TGG | + | chr6.4:45499555-45499574 | MS.gene062690:CDS | 35.0% |
! | GCAGCAGCATTAACAATTTT+TGG | - | chr6.4:45502365-45502384 | None:intergenic | 35.0% |
! | TCTACTTGCATTGGCAAAAT+TGG | + | chr6.4:45500638-45500657 | MS.gene062690:CDS | 35.0% |
! | TTCCAAATTCCTTTTGATGC+AGG | - | chr6.4:45500683-45500702 | None:intergenic | 35.0% |
! | TTTTCTTGGCCAAGTGATTA+TGG | - | chr6.4:45501681-45501700 | None:intergenic | 35.0% |
!! | ATTCTCTTGCTGTGCTATTT+AGG | + | chr6.4:45499677-45499696 | MS.gene062690:CDS | 35.0% |
!! | TTCTCTTGCTGTGCTATTTA+GGG | + | chr6.4:45499678-45499697 | MS.gene062690:CDS | 35.0% |
!! | TTCTTTTAAGAAGGGGTCAA+GGG | - | chr6.4:45501412-45501431 | None:intergenic | 35.0% |
!!! | GAGTAGTAGAATGTTGCTTT+TGG | + | chr6.4:45500865-45500884 | MS.gene062690:CDS | 35.0% |
AACATTGGTCCTAGATGTTG+AGG | + | chr6.4:45500383-45500402 | MS.gene062690:CDS | 40.0% | |
ACACACGTCAGAATAGGTAA+CGG | - | chr6.4:45502693-45502712 | None:intergenic | 40.0% | |
ACATTGGTCCTAGATGTTGA+GGG | + | chr6.4:45500384-45500403 | MS.gene062690:CDS | 40.0% | |
ACTACTCTATCTCGTGCATA+CGG | - | chr6.4:45500852-45500871 | None:intergenic | 40.0% | |
AGCCTGCATCAAAAGGAATT+TGG | + | chr6.4:45500678-45500697 | MS.gene062690:CDS | 40.0% | |
AGGACATGTTTCTTCGTACT+TGG | + | chr6.4:45502551-45502570 | MS.gene062690:CDS | 40.0% | |
ATAGCACAGCAAGAGAATGA+AGG | - | chr6.4:45499675-45499694 | None:intergenic | 40.0% | |
ATAGTTAGCATTCAGCCATC+TGG | - | chr6.4:45502213-45502232 | None:intergenic | 40.0% | |
GATAACTACACACACTCTGA+CGG | + | chr6.4:45502756-45502775 | MS.gene062690:CDS | 40.0% | |
GGATGAATCTTGCTCATAGA+TGG | - | chr6.4:45500607-45500626 | None:intergenic | 40.0% | |
GTATGAAGCCTCACATATGA+CGG | + | chr6.4:45500419-45500438 | MS.gene062690:CDS | 40.0% | |
TAGGTGGGATATTAATTGCC+TGG | + | chr6.4:45501290-45501309 | MS.gene062690:intron | 40.0% | |
TGCTATACATTGCAGGCTTA+GGG | + | chr6.4:45502382-45502401 | MS.gene062690:CDS | 40.0% | |
TTAACATGCCCTCAACATCT+AGG | - | chr6.4:45500395-45500414 | None:intergenic | 40.0% | |
TTAGCGACCAAGATTGAAGA+TGG | - | chr6.4:45501167-45501186 | None:intergenic | 40.0% | |
TTGAGAACACACGTCAGAAT+AGG | - | chr6.4:45502699-45502718 | None:intergenic | 40.0% | |
TTGCAAGAGAAGGACTCAAT+CGG | - | chr6.4:45500512-45500531 | None:intergenic | 40.0% | |
TTGGCTACGACTTCTTACAT+TGG | + | chr6.4:45502290-45502309 | MS.gene062690:CDS | 40.0% | |
! | ATTCCTTTTGATGCAGGCTT+TGG | - | chr6.4:45500677-45500696 | None:intergenic | 40.0% |
!! | ATAGGTAACGGAACTTCAGT+TGG | - | chr6.4:45502681-45502700 | None:intergenic | 40.0% |
!! | CTTCTTTTAAGAAGGGGTCA+AGG | - | chr6.4:45501413-45501432 | None:intergenic | 40.0% |
!! | CTTTATATACAGGTGGTGGA+AGG | + | chr6.4:45500803-45500822 | MS.gene062690:intron | 40.0% |
!!! | GAGGCTTTAGCTTTTACTTC+TGG | + | chr6.4:45500465-45500484 | MS.gene062690:CDS | 40.0% |
AACCAATTCAAGGACGAGCA+AGG | + | chr6.4:45500348-45500367 | MS.gene062690:CDS | 45.0% | |
AAGAAGTCGTAGCCAACACT+GGG | - | chr6.4:45502286-45502305 | None:intergenic | 45.0% | |
ACCATGAACCGTCATATGTG+AGG | - | chr6.4:45500430-45500449 | None:intergenic | 45.0% | |
AGCCCCAATATTCTCAAGCA+AGG | + | chr6.4:45500907-45500926 | MS.gene062690:CDS | 45.0% | |
ATCAAGTGGTTACCCAGTGT+TGG | + | chr6.4:45502271-45502290 | MS.gene062690:CDS | 45.0% | |
ATGCTGCTGCTATACATTGC+AGG | + | chr6.4:45502375-45502394 | MS.gene062690:CDS | 45.0% | |
CAAAAACTTGCCTAGGCTAG+TGG | + | chr6.4:45500566-45500585 | MS.gene062690:CDS | 45.0% | |
CATGGACTTTACGTTTCACC+TGG | + | chr6.4:45499712-45499731 | MS.gene062690:CDS | 45.0% | |
CTGCTATACATTGCAGGCTT+AGG | + | chr6.4:45502381-45502400 | MS.gene062690:CDS | 45.0% | |
CTTATATGAGTGAGGCCAGA+TGG | + | chr6.4:45502195-45502214 | MS.gene062690:CDS | 45.0% | |
GGATGAAATTGTGTCAAGCG+AGG | + | chr6.4:45502403-45502422 | MS.gene062690:CDS | 45.0% | |
GTGGGATATTAATTGCCTGG+AGG | + | chr6.4:45501293-45501312 | MS.gene062690:CDS | 45.0% | |
TAAGAAGTCGTAGCCAACAC+TGG | - | chr6.4:45502287-45502306 | None:intergenic | 45.0% | |
TAATTGCCTGGAGGATCTTC+CGG | + | chr6.4:45501302-45501321 | MS.gene062690:CDS | 45.0% | |
TGCAAGAGAAGGACTCAATC+GGG | - | chr6.4:45500511-45500530 | None:intergenic | 45.0% | |
TGCATGTACTCCTCTGTTGT+TGG | - | chr6.4:45502239-45502258 | None:intergenic | 45.0% | |
TGGCCTCACTCATATAAGCT+TGG | - | chr6.4:45502193-45502212 | None:intergenic | 45.0% | |
TGTGCCGCAGTATTCATATC+AGG | - | chr6.4:45499460-45499479 | None:intergenic | 45.0% | |
TTCCTTGCTCGTCCTTGAAT+TGG | - | chr6.4:45500353-45500372 | None:intergenic | 45.0% | |
! | CAATCTCTCGCGTTTTATCG+AGG | + | chr6.4:45502716-45502735 | MS.gene062690:CDS | 45.0% |
! | CTAGCCTAGGCAAGTTTTTG+CGG | - | chr6.4:45500566-45500585 | None:intergenic | 45.0% |
! | TAACTTCTTGCCACTAGCCT+AGG | - | chr6.4:45500579-45500598 | None:intergenic | 45.0% |
!! | CTGTGCTATTTAGGGTGTTG+AGG | + | chr6.4:45499686-45499705 | MS.gene062690:CDS | 45.0% |
!! | TTTAGGGTGTTGAGGCAACA+TGG | + | chr6.4:45499694-45499713 | MS.gene062690:CDS | 45.0% |
!!! | ATTTTATAATAATAAAAGAT+AGG | + | chr6.4:45499941-45499960 | MS.gene062690:intron | 5.0% |
AAGAGAAGGACTCAATCGGG+TGG | - | chr6.4:45500508-45500527 | None:intergenic | 50.0% | |
CTCTCCGCAAAAACTTGCCT+AGG | + | chr6.4:45500559-45500578 | MS.gene062690:CDS | 50.0% | |
GCCTCACATATGACGGTTCA+TGG | + | chr6.4:45500426-45500445 | MS.gene062690:CDS | 50.0% | |
GCTCCAAAGCCTGCATCAAA+AGG | + | chr6.4:45500671-45500690 | MS.gene062690:CDS | 50.0% | |
TGTAATCCGGAAGATCCTCC+AGG | - | chr6.4:45501311-45501330 | None:intergenic | 50.0% | |
TTCTGGTCACCTTGAGTCGA+TGG | + | chr6.4:45500482-45500501 | MS.gene062690:CDS | 50.0% | |
!! | ATACAGGTGGTGGAAGGAGT+TGG | + | chr6.4:45500809-45500828 | MS.gene062690:intron | 50.0% |
!! | ATCGGGTGGCCATCGACTCA+AGG | - | chr6.4:45500494-45500513 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 45499454 | 45502830 | 45499454 | ID=MS.gene062690 |
chr6.4 | mRNA | 45499454 | 45502830 | 45499454 | ID=MS.gene062690.t1;Parent=MS.gene062690 |
chr6.4 | exon | 45499454 | 45499733 | 45499454 | ID=MS.gene062690.t1.exon1;Parent=MS.gene062690.t1 |
chr6.4 | CDS | 45499454 | 45499733 | 45499454 | ID=cds.MS.gene062690.t1;Parent=MS.gene062690.t1 |
chr6.4 | exon | 45500340 | 45500712 | 45500340 | ID=MS.gene062690.t1.exon2;Parent=MS.gene062690.t1 |
chr6.4 | CDS | 45500340 | 45500712 | 45500340 | ID=cds.MS.gene062690.t1;Parent=MS.gene062690.t1 |
chr6.4 | exon | 45500815 | 45501033 | 45500815 | ID=MS.gene062690.t1.exon3;Parent=MS.gene062690.t1 |
chr6.4 | CDS | 45500815 | 45501033 | 45500815 | ID=cds.MS.gene062690.t1;Parent=MS.gene062690.t1 |
chr6.4 | exon | 45501293 | 45501431 | 45501293 | ID=MS.gene062690.t1.exon4;Parent=MS.gene062690.t1 |
chr6.4 | CDS | 45501293 | 45501431 | 45501293 | ID=cds.MS.gene062690.t1;Parent=MS.gene062690.t1 |
chr6.4 | exon | 45502176 | 45502424 | 45502176 | ID=MS.gene062690.t1.exon5;Parent=MS.gene062690.t1 |
chr6.4 | CDS | 45502176 | 45502424 | 45502176 | ID=cds.MS.gene062690.t1;Parent=MS.gene062690.t1 |
chr6.4 | exon | 45502537 | 45502830 | 45502537 | ID=MS.gene062690.t1.exon6;Parent=MS.gene062690.t1 |
chr6.4 | CDS | 45502537 | 45502830 | 45502537 | ID=cds.MS.gene062690.t1;Parent=MS.gene062690.t1 |
Gene Sequence |
Protein sequence |