Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063279.t1 | XP_003630552.1 | 96.4 | 194 | 3 | 1 | 1 | 194 | 1 | 190 | 3.50E-107 | 397.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063279.t1 | Q9FY93 | 61.3 | 168 | 56 | 3 | 1 | 167 | 1 | 160 | 3.9e-54 | 212.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063279.t1 | G7LI31 | 96.4 | 194 | 3 | 1 | 1 | 194 | 1 | 190 | 2.5e-107 | 397.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene063279.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene063279 | 0.841608 | 4.29E-58 | -1.69E-46 |
| MS.gene050444 | MS.gene063279 | -0.806212 | 9.18E-50 | -1.69E-46 |
| MS.gene050707 | MS.gene063279 | 0.830519 | 2.81E-55 | -1.69E-46 |
| MS.gene050790 | MS.gene063279 | 0.814008 | 1.92E-51 | -1.69E-46 |
| MS.gene051539 | MS.gene063279 | 0.815726 | 7.97E-52 | -1.69E-46 |
| MS.gene053108 | MS.gene063279 | 0.812886 | 3.38E-51 | -1.69E-46 |
| MS.gene053776 | MS.gene063279 | 0.825523 | 4.48E-54 | -1.69E-46 |
| MS.gene054850 | MS.gene063279 | 0.802967 | 4.36E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene063279 | 0.864418 | 1.23E-64 | -1.69E-46 |
| MS.gene055982 | MS.gene063279 | 0.807684 | 4.48E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene063279 | -0.839855 | 1.23E-57 | -1.69E-46 |
| MS.gene05652 | MS.gene063279 | 0.80124 | 9.88E-49 | -1.69E-46 |
| MS.gene056618 | MS.gene063279 | 0.845986 | 2.88E-59 | -1.69E-46 |
| MS.gene057669 | MS.gene063279 | 0.800869 | 1.18E-48 | -1.69E-46 |
| MS.gene057717 | MS.gene063279 | 0.807074 | 6.04E-50 | -1.69E-46 |
| MS.gene058128 | MS.gene063279 | 0.815427 | 9.30E-52 | -1.69E-46 |
| MS.gene058853 | MS.gene063279 | 0.824903 | 6.27E-54 | -1.69E-46 |
| MS.gene05926 | MS.gene063279 | 0.800786 | 1.22E-48 | -1.69E-46 |
| MS.gene059905 | MS.gene063279 | 0.807142 | 5.84E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063279.t1 | MTR_8g099750 | 96.392 | 194 | 3 | 1 | 1 | 194 | 1 | 190 | 2.33e-140 | 390 |
| MS.gene063279.t1 | MTR_3g098810 | 67.327 | 202 | 57 | 3 | 1 | 193 | 1 | 202 | 1.32e-92 | 270 |
| MS.gene063279.t1 | MTR_3g098810 | 75.510 | 147 | 34 | 1 | 1 | 145 | 1 | 147 | 1.92e-78 | 232 |
| MS.gene063279.t1 | MTR_7g005280 | 60.795 | 176 | 60 | 3 | 1 | 175 | 1 | 168 | 5.68e-73 | 221 |
| MS.gene063279.t1 | MTR_4g081870 | 50.307 | 163 | 74 | 4 | 12 | 171 | 7 | 165 | 7.95e-51 | 165 |
| MS.gene063279.t1 | MTR_2g080010 | 47.191 | 178 | 77 | 4 | 14 | 183 | 15 | 183 | 2.48e-49 | 164 |
| MS.gene063279.t1 | MTR_7g100990 | 48.447 | 161 | 78 | 3 | 13 | 171 | 10 | 167 | 5.64e-49 | 162 |
| MS.gene063279.t1 | MTR_7g085220 | 46.821 | 173 | 76 | 5 | 12 | 172 | 6 | 174 | 1.01e-48 | 161 |
| MS.gene063279.t1 | MTR_5g041940 | 51.592 | 157 | 71 | 3 | 14 | 168 | 3 | 156 | 1.61e-48 | 159 |
| MS.gene063279.t1 | MTR_4g089135 | 45.856 | 181 | 72 | 3 | 13 | 170 | 14 | 191 | 3.35e-48 | 160 |
| MS.gene063279.t1 | MTR_2g093810 | 51.948 | 154 | 69 | 3 | 14 | 164 | 14 | 165 | 1.03e-47 | 159 |
| MS.gene063279.t1 | MTR_3g088110 | 48.734 | 158 | 74 | 3 | 13 | 168 | 6 | 158 | 2.29e-46 | 154 |
| MS.gene063279.t1 | MTR_8g094580 | 45.614 | 171 | 87 | 3 | 9 | 177 | 2 | 168 | 5.96e-46 | 153 |
| MS.gene063279.t1 | MTR_5g012080 | 51.220 | 164 | 62 | 7 | 9 | 164 | 2 | 155 | 1.77e-45 | 153 |
| MS.gene063279.t1 | MTR_4g036030 | 45.856 | 181 | 81 | 6 | 9 | 183 | 2 | 171 | 3.58e-45 | 152 |
| MS.gene063279.t1 | MTR_2157s0010 | 46.835 | 158 | 77 | 3 | 14 | 164 | 8 | 165 | 4.35e-44 | 147 |
| MS.gene063279.t1 | MTR_4g101680 | 47.059 | 170 | 76 | 6 | 9 | 173 | 2 | 162 | 7.11e-44 | 149 |
| MS.gene063279.t1 | MTR_3g096920 | 46.552 | 174 | 81 | 6 | 9 | 178 | 2 | 167 | 4.67e-43 | 145 |
| MS.gene063279.t1 | MTR_2g068880 | 43.503 | 177 | 88 | 5 | 6 | 170 | 13 | 189 | 1.19e-42 | 145 |
| MS.gene063279.t1 | MTR_8g467490 | 43.114 | 167 | 85 | 3 | 8 | 164 | 4 | 170 | 2.05e-42 | 146 |
| MS.gene063279.t1 | MTR_6g011860 | 44.444 | 162 | 83 | 3 | 9 | 164 | 10 | 170 | 3.05e-42 | 146 |
| MS.gene063279.t1 | MTR_8g076110 | 43.636 | 165 | 78 | 5 | 14 | 173 | 6 | 160 | 3.57e-42 | 144 |
| MS.gene063279.t1 | MTR_2g079990 | 45.625 | 160 | 78 | 3 | 14 | 171 | 16 | 168 | 8.64e-42 | 144 |
| MS.gene063279.t1 | MTR_3g109340 | 41.176 | 170 | 92 | 2 | 14 | 181 | 22 | 185 | 1.24e-41 | 144 |
| MS.gene063279.t1 | MTR_2g068920 | 45.509 | 167 | 78 | 5 | 16 | 170 | 23 | 188 | 1.66e-41 | 142 |
| MS.gene063279.t1 | MTR_8g059170 | 45.912 | 159 | 79 | 3 | 14 | 170 | 14 | 167 | 1.71e-41 | 142 |
| MS.gene063279.t1 | MTR_3g064580 | 50.323 | 155 | 67 | 4 | 14 | 164 | 6 | 154 | 2.73e-41 | 147 |
| MS.gene063279.t1 | MTR_5g076850 | 44.444 | 180 | 82 | 5 | 14 | 183 | 6 | 177 | 3.62e-41 | 147 |
| MS.gene063279.t1 | MTR_3g109340 | 40.588 | 170 | 92 | 2 | 14 | 181 | 22 | 184 | 5.26e-41 | 142 |
| MS.gene063279.t1 | MTR_4g035590 | 44.751 | 181 | 82 | 6 | 14 | 186 | 8 | 178 | 7.64e-41 | 141 |
| MS.gene063279.t1 | MTR_5g021710 | 43.860 | 171 | 81 | 5 | 14 | 179 | 8 | 168 | 8.32e-41 | 141 |
| MS.gene063279.t1 | MTR_1g096430 | 45.161 | 155 | 71 | 3 | 14 | 163 | 7 | 152 | 1.36e-40 | 140 |
| MS.gene063279.t1 | MTR_2g062730 | 42.941 | 170 | 84 | 4 | 10 | 174 | 6 | 167 | 1.83e-40 | 140 |
| MS.gene063279.t1 | MTR_8g024480 | 42.458 | 179 | 86 | 5 | 2 | 168 | 3 | 176 | 2.77e-40 | 142 |
| MS.gene063279.t1 | MTR_5g090970 | 45.562 | 169 | 79 | 5 | 16 | 174 | 20 | 185 | 3.22e-40 | 139 |
| MS.gene063279.t1 | MTR_5g090970 | 45.833 | 168 | 79 | 5 | 16 | 174 | 20 | 184 | 3.32e-40 | 139 |
| MS.gene063279.t1 | MTR_2g078700 | 42.593 | 162 | 88 | 2 | 12 | 171 | 21 | 179 | 3.40e-40 | 140 |
| MS.gene063279.t1 | MTR_6g084430 | 43.791 | 153 | 75 | 3 | 14 | 164 | 5 | 148 | 4.09e-40 | 139 |
| MS.gene063279.t1 | MTR_3g435150 | 44.375 | 160 | 82 | 3 | 14 | 171 | 16 | 170 | 4.47e-40 | 138 |
| MS.gene063279.t1 | MTR_4g108760 | 43.125 | 160 | 84 | 3 | 14 | 171 | 17 | 171 | 5.78e-40 | 139 |
| MS.gene063279.t1 | MTR_5g040420 | 51.587 | 126 | 59 | 1 | 16 | 139 | 16 | 141 | 8.50e-40 | 139 |
| MS.gene063279.t1 | MTR_3g093040 | 41.667 | 180 | 86 | 5 | 14 | 183 | 108 | 278 | 1.35e-39 | 137 |
| MS.gene063279.t1 | MTR_6g477900 | 45.399 | 163 | 76 | 4 | 14 | 172 | 6 | 159 | 2.57e-39 | 134 |
| MS.gene063279.t1 | MTR_3g096140 | 42.604 | 169 | 80 | 5 | 16 | 175 | 9 | 169 | 4.01e-39 | 135 |
| MS.gene063279.t1 | MTR_1g008740 | 41.040 | 173 | 85 | 4 | 14 | 179 | 13 | 175 | 1.28e-38 | 135 |
| MS.gene063279.t1 | MTR_1g008740 | 41.040 | 173 | 85 | 4 | 14 | 179 | 27 | 189 | 1.69e-38 | 135 |
| MS.gene063279.t1 | MTR_3g096140 | 42.604 | 169 | 80 | 5 | 16 | 175 | 9 | 169 | 3.64e-38 | 134 |
| MS.gene063279.t1 | MTR_3g093050 | 41.530 | 183 | 89 | 5 | 11 | 184 | 19 | 192 | 4.99e-38 | 138 |
| MS.gene063279.t1 | MTR_3g096920 | 46.897 | 145 | 72 | 2 | 9 | 151 | 2 | 143 | 5.84e-38 | 133 |
| MS.gene063279.t1 | MTR_3g093050 | 41.530 | 183 | 89 | 5 | 11 | 184 | 19 | 192 | 7.65e-38 | 137 |
| MS.gene063279.t1 | MTR_5g014300 | 43.293 | 164 | 76 | 4 | 10 | 164 | 2 | 157 | 8.90e-38 | 133 |
| MS.gene063279.t1 | MTR_2g079990 | 39.344 | 183 | 84 | 3 | 14 | 171 | 16 | 196 | 9.58e-38 | 134 |
| MS.gene063279.t1 | MTR_2g064090 | 49.618 | 131 | 60 | 2 | 14 | 140 | 6 | 134 | 1.02e-37 | 133 |
| MS.gene063279.t1 | MTR_6g012670 | 40.994 | 161 | 88 | 3 | 13 | 171 | 19 | 174 | 1.06e-37 | 132 |
| MS.gene063279.t1 | MTR_4g134460 | 46.250 | 160 | 74 | 5 | 16 | 173 | 56 | 205 | 1.40e-37 | 134 |
| MS.gene063279.t1 | MTR_5g069030 | 46.875 | 160 | 70 | 4 | 11 | 164 | 22 | 172 | 2.29e-37 | 136 |
| MS.gene063279.t1 | MTR_4g098630 | 40.957 | 188 | 95 | 4 | 12 | 191 | 4 | 183 | 2.45e-37 | 131 |
| MS.gene063279.t1 | MTR_7g085260 | 43.226 | 155 | 81 | 3 | 14 | 164 | 17 | 168 | 4.03e-37 | 132 |
| MS.gene063279.t1 | MTR_3g070030 | 43.030 | 165 | 86 | 4 | 7 | 168 | 12 | 171 | 5.06e-37 | 131 |
| MS.gene063279.t1 | MTR_8g023840 | 42.949 | 156 | 73 | 4 | 14 | 164 | 11 | 155 | 2.47e-36 | 130 |
| MS.gene063279.t1 | MTR_1g069805 | 40.625 | 160 | 84 | 3 | 7 | 164 | 3 | 153 | 3.07e-36 | 127 |
| MS.gene063279.t1 | MTR_6g032770 | 38.095 | 168 | 97 | 3 | 14 | 179 | 18 | 180 | 1.01e-35 | 129 |
| MS.gene063279.t1 | MTR_3g116070 | 45.736 | 129 | 67 | 2 | 14 | 139 | 23 | 151 | 3.37e-35 | 127 |
| MS.gene063279.t1 | MTR_4g075980 | 49.606 | 127 | 61 | 2 | 16 | 139 | 17 | 143 | 4.63e-35 | 125 |
| MS.gene063279.t1 | MTR_8g093580 | 39.655 | 174 | 90 | 4 | 10 | 175 | 2 | 168 | 5.60e-35 | 128 |
| MS.gene063279.t1 | MTR_7g097090 | 41.935 | 155 | 79 | 3 | 12 | 164 | 8 | 153 | 5.83e-35 | 125 |
| MS.gene063279.t1 | MTR_8g063550 | 39.080 | 174 | 91 | 4 | 10 | 175 | 2 | 168 | 7.99e-35 | 125 |
| MS.gene063279.t1 | MTR_8g023860 | 42.138 | 159 | 76 | 4 | 11 | 164 | 9 | 156 | 8.92e-35 | 127 |
| MS.gene063279.t1 | MTR_8g063550 | 39.080 | 174 | 91 | 4 | 10 | 175 | 2 | 168 | 1.79e-34 | 126 |
| MS.gene063279.t1 | MTR_8g063550 | 39.080 | 174 | 91 | 4 | 10 | 175 | 2 | 168 | 3.06e-34 | 125 |
| MS.gene063279.t1 | MTR_1g090720 | 45.513 | 156 | 78 | 3 | 14 | 164 | 42 | 195 | 4.82e-34 | 126 |
| MS.gene063279.t1 | MTR_2g086880 | 45.038 | 131 | 67 | 2 | 10 | 137 | 14 | 142 | 5.58e-34 | 127 |
| MS.gene063279.t1 | MTR_2g086880 | 45.038 | 131 | 67 | 2 | 10 | 137 | 14 | 142 | 6.49e-34 | 126 |
| MS.gene063279.t1 | MTR_2g064470 | 38.125 | 160 | 89 | 4 | 12 | 169 | 9 | 160 | 3.13e-33 | 120 |
| MS.gene063279.t1 | MTR_7g011130 | 43.704 | 135 | 72 | 2 | 7 | 139 | 12 | 144 | 1.07e-32 | 120 |
| MS.gene063279.t1 | MTR_7g011120 | 37.427 | 171 | 99 | 4 | 7 | 171 | 1 | 169 | 1.34e-32 | 119 |
| MS.gene063279.t1 | MTR_1g097300 | 48.438 | 128 | 60 | 2 | 16 | 139 | 21 | 146 | 2.06e-32 | 122 |
| MS.gene063279.t1 | MTR_8g023930 | 40.606 | 165 | 82 | 4 | 14 | 173 | 24 | 177 | 3.53e-32 | 120 |
| MS.gene063279.t1 | MTR_1g090723 | 39.157 | 166 | 86 | 5 | 16 | 175 | 10 | 166 | 4.90e-32 | 121 |
| MS.gene063279.t1 | MTR_1g090723 | 39.157 | 166 | 86 | 5 | 16 | 175 | 10 | 166 | 4.93e-32 | 121 |
| MS.gene063279.t1 | MTR_3g070040 | 41.558 | 154 | 86 | 3 | 18 | 171 | 12 | 161 | 8.19e-32 | 117 |
| MS.gene063279.t1 | MTR_1g090723 | 39.157 | 166 | 87 | 5 | 16 | 175 | 10 | 167 | 9.30e-32 | 120 |
| MS.gene063279.t1 | MTR_0036s0150 | 39.157 | 166 | 86 | 5 | 16 | 175 | 7 | 163 | 4.50e-31 | 118 |
| MS.gene063279.t1 | MTR_4g052620 | 40.000 | 160 | 86 | 4 | 14 | 166 | 5 | 161 | 4.91e-31 | 114 |
| MS.gene063279.t1 | MTR_2g086690 | 40.625 | 160 | 84 | 4 | 15 | 166 | 5 | 161 | 1.15e-30 | 112 |
| MS.gene063279.t1 | MTR_8g023900 | 40.523 | 153 | 75 | 4 | 17 | 164 | 196 | 337 | 6.74e-30 | 114 |
| MS.gene063279.t1 | MTR_8g023900 | 39.103 | 156 | 81 | 5 | 14 | 164 | 12 | 158 | 7.40e-28 | 108 |
| MS.gene063279.t1 | MTR_4g094302 | 41.732 | 127 | 66 | 3 | 14 | 139 | 11 | 130 | 7.62e-30 | 108 |
| MS.gene063279.t1 | MTR_4g094302 | 37.107 | 159 | 91 | 4 | 14 | 170 | 11 | 162 | 8.30e-30 | 108 |
| MS.gene063279.t1 | MTR_3g096140 | 39.610 | 154 | 76 | 5 | 31 | 175 | 3 | 148 | 1.01e-29 | 112 |
| MS.gene063279.t1 | MTR_7g070140 | 62.821 | 78 | 29 | 0 | 62 | 139 | 14 | 91 | 5.88e-29 | 105 |
| MS.gene063279.t1 | MTR_7g105170 | 37.500 | 160 | 89 | 4 | 14 | 164 | 4 | 161 | 2.48e-28 | 107 |
| MS.gene063279.t1 | MTR_8g094580 | 44.248 | 113 | 59 | 2 | 65 | 177 | 6 | 114 | 8.23e-27 | 102 |
| MS.gene063279.t1 | MTR_8g093790 | 32.934 | 167 | 83 | 7 | 13 | 177 | 9 | 148 | 6.54e-23 | 90.9 |
| MS.gene063279.t1 | MTR_8g023880 | 33.721 | 172 | 80 | 6 | 12 | 164 | 5 | 161 | 8.84e-22 | 89.7 |
| MS.gene063279.t1 | MTR_3g096400 | 31.902 | 163 | 90 | 7 | 13 | 164 | 6 | 158 | 7.85e-18 | 78.2 |
| MS.gene063279.t1 | MTR_7g070150 | 49.231 | 65 | 23 | 2 | 110 | 173 | 8 | 63 | 9.52e-16 | 69.7 |
| MS.gene063279.t1 | MTR_7g083330 | 27.957 | 186 | 110 | 8 | 13 | 194 | 17 | 182 | 4.84e-15 | 70.5 |
| MS.gene063279.t1 | MTR_7g083370 | 28.148 | 135 | 89 | 4 | 7 | 137 | 3 | 133 | 4.64e-14 | 66.6 |
| MS.gene063279.t1 | MTR_7g116460 | 29.825 | 171 | 98 | 6 | 20 | 180 | 11 | 169 | 3.14e-13 | 65.9 |
| MS.gene063279.t1 | MTR_2g014680 | 32.000 | 150 | 79 | 8 | 9 | 139 | 48 | 193 | 1.74e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063279.t1 | AT5G13180 | 61.628 | 172 | 57 | 3 | 1 | 171 | 1 | 164 | 1.49e-70 | 215 |
| MS.gene063279.t1 | AT2G33480 | 58.480 | 171 | 62 | 4 | 1 | 170 | 1 | 163 | 3.53e-64 | 199 |
| MS.gene063279.t1 | AT2G33480 | 57.895 | 171 | 61 | 4 | 1 | 170 | 1 | 161 | 2.14e-63 | 197 |
| MS.gene063279.t1 | AT3G04070 | 46.512 | 172 | 85 | 3 | 8 | 172 | 4 | 175 | 7.98e-51 | 167 |
| MS.gene063279.t1 | AT1G69490 | 51.613 | 155 | 70 | 3 | 12 | 164 | 7 | 158 | 9.04e-50 | 162 |
| MS.gene063279.t1 | AT1G77450 | 46.073 | 191 | 88 | 6 | 6 | 186 | 1 | 186 | 7.94e-48 | 157 |
| MS.gene063279.t1 | AT1G61110 | 50.595 | 168 | 71 | 5 | 7 | 164 | 9 | 174 | 1.10e-47 | 158 |
| MS.gene063279.t1 | AT3G15510 | 50.323 | 155 | 69 | 3 | 18 | 164 | 21 | 175 | 1.48e-47 | 159 |
| MS.gene063279.t1 | AT3G04070 | 42.553 | 188 | 85 | 4 | 8 | 172 | 4 | 191 | 2.25e-47 | 159 |
| MS.gene063279.t1 | AT1G01720 | 45.977 | 174 | 82 | 4 | 13 | 184 | 6 | 169 | 6.56e-46 | 153 |
| MS.gene063279.t1 | AT4G17980 | 46.541 | 159 | 78 | 2 | 10 | 164 | 2 | 157 | 8.71e-46 | 152 |
| MS.gene063279.t1 | AT4G17980 | 46.541 | 159 | 78 | 2 | 10 | 164 | 2 | 157 | 2.39e-45 | 152 |
| MS.gene063279.t1 | AT5G46590 | 46.914 | 162 | 77 | 3 | 10 | 167 | 2 | 158 | 5.47e-45 | 150 |
| MS.gene063279.t1 | AT5G39610 | 46.250 | 160 | 79 | 3 | 14 | 171 | 20 | 174 | 6.06e-44 | 148 |
| MS.gene063279.t1 | AT5G46590 | 49.669 | 151 | 70 | 3 | 10 | 156 | 2 | 150 | 1.06e-43 | 147 |
| MS.gene063279.t1 | AT1G12260 | 42.857 | 182 | 84 | 6 | 9 | 180 | 2 | 173 | 1.24e-43 | 149 |
| MS.gene063279.t1 | AT1G12260 | 42.857 | 182 | 84 | 6 | 9 | 180 | 2 | 173 | 4.11e-43 | 148 |
| MS.gene063279.t1 | AT1G62700 | 44.199 | 181 | 85 | 5 | 9 | 183 | 2 | 172 | 6.57e-43 | 148 |
| MS.gene063279.t1 | AT1G62700 | 44.199 | 181 | 85 | 5 | 9 | 183 | 2 | 172 | 6.57e-43 | 148 |
| MS.gene063279.t1 | AT1G33060 | 48.387 | 155 | 69 | 3 | 14 | 164 | 24 | 171 | 8.67e-43 | 151 |
| MS.gene063279.t1 | AT1G33060 | 48.387 | 155 | 69 | 3 | 14 | 164 | 24 | 171 | 9.49e-43 | 151 |
| MS.gene063279.t1 | AT4G27410 | 45.625 | 160 | 77 | 4 | 14 | 171 | 14 | 165 | 9.65e-43 | 145 |
| MS.gene063279.t1 | AT3G10490 | 45.283 | 159 | 75 | 4 | 11 | 164 | 24 | 175 | 1.67e-42 | 142 |
| MS.gene063279.t1 | AT1G52890 | 46.250 | 160 | 77 | 3 | 14 | 171 | 14 | 166 | 3.18e-42 | 144 |
| MS.gene063279.t1 | AT5G62380 | 44.253 | 174 | 83 | 5 | 11 | 179 | 4 | 168 | 4.07e-42 | 145 |
| MS.gene063279.t1 | AT5G62380 | 44.253 | 174 | 83 | 5 | 11 | 179 | 4 | 168 | 4.07e-42 | 145 |
| MS.gene063279.t1 | AT3G15500 | 46.250 | 160 | 77 | 3 | 14 | 171 | 14 | 166 | 4.39e-42 | 144 |
| MS.gene063279.t1 | AT5G63790 | 43.558 | 163 | 87 | 2 | 14 | 174 | 50 | 209 | 1.06e-41 | 143 |
| MS.gene063279.t1 | AT5G63790 | 43.558 | 163 | 87 | 2 | 14 | 174 | 60 | 219 | 1.29e-41 | 143 |
| MS.gene063279.t1 | AT3G10480 | 45.570 | 158 | 75 | 3 | 11 | 164 | 24 | 174 | 1.39e-41 | 145 |
| MS.gene063279.t1 | AT1G32770 | 41.989 | 181 | 85 | 4 | 2 | 168 | 4 | 178 | 1.44e-41 | 144 |
| MS.gene063279.t1 | AT1G71930 | 45.860 | 157 | 71 | 4 | 12 | 163 | 7 | 154 | 1.65e-41 | 142 |
| MS.gene063279.t1 | AT1G71930 | 45.860 | 157 | 71 | 4 | 12 | 163 | 7 | 154 | 1.65e-41 | 142 |
| MS.gene063279.t1 | AT2G18060 | 43.860 | 171 | 81 | 5 | 14 | 179 | 9 | 169 | 1.94e-41 | 143 |
| MS.gene063279.t1 | AT2G18060 | 43.860 | 171 | 81 | 5 | 14 | 179 | 9 | 169 | 1.94e-41 | 143 |
| MS.gene063279.t1 | AT1G65910 | 48.387 | 155 | 69 | 3 | 14 | 164 | 6 | 153 | 2.08e-41 | 147 |
| MS.gene063279.t1 | AT5G08790 | 44.172 | 163 | 86 | 2 | 14 | 174 | 7 | 166 | 2.34e-41 | 141 |
| MS.gene063279.t1 | AT5G39820 | 42.515 | 167 | 78 | 3 | 16 | 164 | 22 | 188 | 2.97e-41 | 142 |
| MS.gene063279.t1 | AT1G76420 | 45.098 | 153 | 76 | 2 | 14 | 164 | 22 | 168 | 6.32e-41 | 141 |
| MS.gene063279.t1 | AT5G07680 | 43.750 | 160 | 83 | 3 | 14 | 171 | 3 | 157 | 7.05e-41 | 140 |
| MS.gene063279.t1 | AT5G61430 | 43.750 | 160 | 83 | 3 | 14 | 171 | 16 | 170 | 7.27e-41 | 141 |
| MS.gene063279.t1 | AT5G07680 | 43.750 | 160 | 83 | 3 | 14 | 171 | 17 | 171 | 9.15e-41 | 140 |
| MS.gene063279.t1 | AT1G52880 | 46.914 | 162 | 75 | 4 | 18 | 170 | 21 | 180 | 1.69e-40 | 140 |
| MS.gene063279.t1 | AT3G10490 | 45.283 | 159 | 75 | 4 | 11 | 164 | 24 | 175 | 1.83e-40 | 142 |
| MS.gene063279.t1 | AT1G79580 | 45.181 | 166 | 73 | 4 | 10 | 168 | 13 | 167 | 1.84e-40 | 141 |
| MS.gene063279.t1 | AT1G79580 | 45.181 | 166 | 73 | 4 | 10 | 168 | 13 | 167 | 1.84e-40 | 141 |
| MS.gene063279.t1 | AT1G79580 | 45.181 | 166 | 73 | 4 | 10 | 168 | 13 | 167 | 1.84e-40 | 141 |
| MS.gene063279.t1 | AT1G79580 | 45.181 | 166 | 73 | 4 | 10 | 168 | 13 | 167 | 1.84e-40 | 141 |
| MS.gene063279.t1 | AT1G79580 | 45.181 | 166 | 73 | 4 | 10 | 168 | 13 | 167 | 1.84e-40 | 141 |
| MS.gene063279.t1 | AT4G10350 | 45.000 | 160 | 76 | 3 | 14 | 168 | 9 | 161 | 2.45e-40 | 140 |
| MS.gene063279.t1 | AT4G36160 | 44.375 | 160 | 75 | 4 | 14 | 168 | 10 | 160 | 2.90e-40 | 140 |
| MS.gene063279.t1 | AT4G36160 | 44.375 | 160 | 75 | 4 | 14 | 168 | 10 | 160 | 2.90e-40 | 140 |
| MS.gene063279.t1 | AT3G04060 | 44.586 | 157 | 79 | 4 | 11 | 164 | 17 | 168 | 3.06e-40 | 139 |
| MS.gene063279.t1 | AT4G36160 | 44.375 | 160 | 75 | 4 | 14 | 168 | 14 | 164 | 3.17e-40 | 140 |
| MS.gene063279.t1 | AT3G10480 | 45.283 | 159 | 75 | 4 | 11 | 164 | 24 | 175 | 3.81e-40 | 142 |
| MS.gene063279.t1 | AT2G24430 | 42.945 | 163 | 85 | 2 | 14 | 174 | 16 | 172 | 5.09e-40 | 138 |
| MS.gene063279.t1 | AT2G24430 | 42.945 | 163 | 85 | 2 | 14 | 174 | 16 | 172 | 5.09e-40 | 138 |
| MS.gene063279.t1 | AT1G26870 | 43.949 | 157 | 82 | 2 | 14 | 164 | 16 | 172 | 5.58e-40 | 140 |
| MS.gene063279.t1 | AT1G32510 | 45.029 | 171 | 81 | 3 | 12 | 173 | 4 | 170 | 5.79e-40 | 137 |
| MS.gene063279.t1 | AT5G66300 | 43.902 | 164 | 78 | 4 | 14 | 172 | 12 | 166 | 6.88e-40 | 137 |
| MS.gene063279.t1 | AT4G35580 | 46.497 | 157 | 69 | 4 | 14 | 164 | 9 | 156 | 6.93e-40 | 142 |
| MS.gene063279.t1 | AT4G35580 | 46.497 | 157 | 69 | 4 | 14 | 164 | 9 | 156 | 7.76e-40 | 142 |
| MS.gene063279.t1 | AT4G35580 | 46.497 | 157 | 69 | 4 | 14 | 164 | 9 | 156 | 8.01e-40 | 142 |
| MS.gene063279.t1 | AT4G27410 | 41.808 | 177 | 76 | 5 | 14 | 171 | 14 | 182 | 1.03e-39 | 137 |
| MS.gene063279.t1 | AT3G61910 | 40.223 | 179 | 82 | 4 | 4 | 164 | 1 | 172 | 1.29e-39 | 138 |
| MS.gene063279.t1 | AT3G29035 | 46.528 | 144 | 73 | 2 | 14 | 155 | 24 | 165 | 1.90e-39 | 137 |
| MS.gene063279.t1 | AT5G17260 | 45.614 | 171 | 81 | 5 | 14 | 180 | 6 | 168 | 1.96e-39 | 140 |
| MS.gene063279.t1 | AT3G15170 | 40.373 | 161 | 85 | 3 | 12 | 167 | 18 | 172 | 2.59e-39 | 136 |
| MS.gene063279.t1 | AT3G03200 | 46.452 | 155 | 73 | 4 | 14 | 164 | 6 | 154 | 3.12e-39 | 140 |
| MS.gene063279.t1 | AT1G33280 | 43.750 | 176 | 81 | 5 | 14 | 181 | 8 | 173 | 4.11e-39 | 136 |
| MS.gene063279.t1 | AT3G17730 | 44.172 | 163 | 78 | 4 | 14 | 172 | 6 | 159 | 4.37e-39 | 134 |
| MS.gene063279.t1 | AT2G46770 | 41.954 | 174 | 84 | 5 | 9 | 168 | 11 | 181 | 4.74e-39 | 137 |
| MS.gene063279.t1 | AT3G18400 | 43.137 | 153 | 77 | 3 | 14 | 164 | 5 | 149 | 5.43e-39 | 135 |
| MS.gene063279.t1 | AT2G02450 | 44.086 | 186 | 83 | 7 | 16 | 190 | 53 | 228 | 7.18e-39 | 137 |
| MS.gene063279.t1 | AT5G53950 | 43.590 | 156 | 77 | 3 | 14 | 164 | 17 | 166 | 7.48e-39 | 137 |
| MS.gene063279.t1 | AT2G02450 | 44.086 | 186 | 83 | 7 | 16 | 190 | 53 | 228 | 8.50e-39 | 137 |
| MS.gene063279.t1 | AT3G12977 | 39.378 | 193 | 93 | 6 | 12 | 191 | 16 | 197 | 5.05e-38 | 132 |
| MS.gene063279.t1 | AT5G18270 | 42.683 | 164 | 86 | 4 | 4 | 164 | 11 | 169 | 6.85e-38 | 133 |
| MS.gene063279.t1 | AT5G18270 | 42.683 | 164 | 86 | 4 | 4 | 164 | 11 | 169 | 7.46e-38 | 133 |
| MS.gene063279.t1 | AT2G17040 | 50.394 | 127 | 60 | 2 | 16 | 139 | 8 | 134 | 7.87e-38 | 132 |
| MS.gene063279.t1 | AT3G10500 | 41.954 | 174 | 86 | 4 | 8 | 175 | 3 | 167 | 1.09e-37 | 136 |
| MS.gene063279.t1 | AT2G43000 | 43.312 | 157 | 81 | 3 | 16 | 170 | 20 | 170 | 3.23e-37 | 130 |
| MS.gene063279.t1 | AT1G54330 | 45.255 | 137 | 69 | 2 | 14 | 146 | 6 | 140 | 3.08e-36 | 128 |
| MS.gene063279.t1 | AT3G12910 | 41.765 | 170 | 88 | 4 | 16 | 174 | 23 | 192 | 5.31e-36 | 128 |
| MS.gene063279.t1 | AT5G24590 | 44.304 | 158 | 78 | 4 | 11 | 164 | 10 | 161 | 1.10e-35 | 130 |
| MS.gene063279.t1 | AT1G56010 | 39.521 | 167 | 88 | 5 | 12 | 172 | 17 | 176 | 2.57e-35 | 126 |
| MS.gene063279.t1 | AT5G04410 | 38.418 | 177 | 94 | 4 | 8 | 176 | 3 | 172 | 4.26e-35 | 129 |
| MS.gene063279.t1 | AT3G10480 | 37.824 | 193 | 75 | 5 | 10 | 164 | 23 | 208 | 6.68e-35 | 129 |
| MS.gene063279.t1 | AT5G09330 | 42.938 | 177 | 82 | 6 | 10 | 176 | 2 | 169 | 1.63e-34 | 127 |
| MS.gene063279.t1 | AT5G09330 | 42.938 | 177 | 82 | 6 | 10 | 176 | 2 | 169 | 1.63e-34 | 127 |
| MS.gene063279.t1 | AT5G09330 | 42.938 | 177 | 82 | 6 | 10 | 176 | 2 | 169 | 1.63e-34 | 127 |
| MS.gene063279.t1 | AT5G09330 | 42.938 | 177 | 82 | 6 | 10 | 176 | 2 | 169 | 1.63e-34 | 127 |
| MS.gene063279.t1 | AT5G09330 | 42.938 | 177 | 82 | 6 | 10 | 176 | 2 | 169 | 1.63e-34 | 127 |
| MS.gene063279.t1 | AT5G04395 | 44.366 | 142 | 63 | 2 | 14 | 139 | 28 | 169 | 2.54e-34 | 120 |
| MS.gene063279.t1 | AT3G49530 | 46.512 | 129 | 64 | 2 | 14 | 138 | 13 | 140 | 4.25e-34 | 125 |
| MS.gene063279.t1 | AT3G49530 | 46.512 | 129 | 64 | 2 | 14 | 138 | 13 | 140 | 8.70e-34 | 125 |
| MS.gene063279.t1 | AT3G44290 | 36.702 | 188 | 97 | 5 | 7 | 191 | 7 | 175 | 1.35e-33 | 119 |
| MS.gene063279.t1 | AT5G64060 | 39.205 | 176 | 90 | 5 | 10 | 176 | 2 | 169 | 3.22e-33 | 122 |
| MS.gene063279.t1 | AT1G34180 | 50.000 | 132 | 60 | 2 | 16 | 143 | 18 | 147 | 3.51e-33 | 123 |
| MS.gene063279.t1 | AT1G34180 | 50.781 | 128 | 57 | 2 | 16 | 139 | 18 | 143 | 7.49e-33 | 123 |
| MS.gene063279.t1 | AT3G44290 | 36.702 | 188 | 97 | 5 | 7 | 191 | 7 | 175 | 1.05e-32 | 120 |
| MS.gene063279.t1 | AT2G27300 | 37.158 | 183 | 94 | 4 | 1 | 180 | 1 | 165 | 3.37e-32 | 119 |
| MS.gene063279.t1 | AT5G22290 | 37.143 | 175 | 89 | 5 | 16 | 186 | 23 | 180 | 3.53e-32 | 119 |
| MS.gene063279.t1 | AT1G34190 | 48.438 | 128 | 60 | 2 | 16 | 139 | 18 | 143 | 5.13e-32 | 121 |
| MS.gene063279.t1 | AT2G33480 | 51.786 | 112 | 46 | 3 | 59 | 170 | 3 | 106 | 8.46e-32 | 114 |
| MS.gene063279.t1 | AT1G34180 | 46.429 | 140 | 57 | 2 | 16 | 139 | 18 | 155 | 1.71e-31 | 119 |
| MS.gene063279.t1 | AT4G28530 | 37.569 | 181 | 86 | 4 | 7 | 169 | 3 | 174 | 2.16e-31 | 117 |
| MS.gene063279.t1 | AT1G34180 | 46.429 | 140 | 57 | 2 | 16 | 139 | 18 | 155 | 2.92e-31 | 119 |
| MS.gene063279.t1 | AT5G50820 | 37.209 | 172 | 98 | 6 | 6 | 173 | 8 | 173 | 4.38e-29 | 107 |
| MS.gene063279.t1 | AT4G01520 | 43.939 | 132 | 67 | 4 | 15 | 139 | 5 | 136 | 9.19e-28 | 106 |
| MS.gene063279.t1 | AT5G14000 | 34.940 | 166 | 96 | 3 | 7 | 170 | 8 | 163 | 4.36e-27 | 102 |
| MS.gene063279.t1 | AT4G01550 | 44.961 | 129 | 65 | 3 | 17 | 139 | 7 | 135 | 5.35e-27 | 106 |
| MS.gene063279.t1 | AT5G64530 | 41.732 | 127 | 62 | 3 | 14 | 139 | 3 | 118 | 1.39e-26 | 99.8 |
| MS.gene063279.t1 | AT5G14000 | 37.778 | 135 | 80 | 2 | 7 | 139 | 8 | 140 | 2.09e-26 | 99.4 |
| MS.gene063279.t1 | AT5G64530 | 36.025 | 161 | 82 | 4 | 14 | 164 | 3 | 152 | 2.36e-26 | 100 |
| MS.gene063279.t1 | AT1G32870 | 47.826 | 138 | 60 | 5 | 7 | 139 | 5 | 135 | 4.79e-26 | 104 |
| MS.gene063279.t1 | AT4G01540 | 43.077 | 130 | 67 | 4 | 17 | 139 | 7 | 136 | 4.82e-26 | 103 |
| MS.gene063279.t1 | AT1G32870 | 47.826 | 138 | 60 | 5 | 7 | 139 | 5 | 135 | 5.10e-26 | 104 |
| MS.gene063279.t1 | AT4G01540 | 43.077 | 130 | 67 | 4 | 17 | 139 | 7 | 136 | 5.37e-26 | 103 |
| MS.gene063279.t1 | AT1G32870 | 47.826 | 138 | 60 | 5 | 7 | 139 | 41 | 171 | 5.38e-26 | 104 |
| MS.gene063279.t1 | AT4G01540 | 43.077 | 130 | 67 | 4 | 17 | 139 | 7 | 136 | 1.02e-25 | 103 |
| MS.gene063279.t1 | AT4G01540 | 43.077 | 130 | 67 | 4 | 17 | 139 | 7 | 136 | 1.53e-25 | 102 |
| MS.gene063279.t1 | AT1G02230 | 33.721 | 172 | 94 | 6 | 15 | 179 | 4 | 162 | 7.91e-24 | 97.1 |
| MS.gene063279.t1 | AT3G12977 | 40.299 | 134 | 64 | 4 | 66 | 191 | 19 | 144 | 8.71e-24 | 94.4 |
| MS.gene063279.t1 | AT5G22380 | 35.484 | 186 | 102 | 6 | 17 | 194 | 8 | 183 | 1.62e-23 | 94.0 |
| MS.gene063279.t1 | AT4G10350 | 43.519 | 108 | 54 | 2 | 61 | 168 | 14 | 114 | 2.05e-23 | 94.7 |
| MS.gene063279.t1 | AT1G02250 | 34.946 | 186 | 89 | 7 | 15 | 184 | 4 | 173 | 3.14e-23 | 95.1 |
| MS.gene063279.t1 | AT3G44350 | 39.161 | 143 | 77 | 4 | 14 | 149 | 5 | 144 | 6.30e-23 | 90.5 |
| MS.gene063279.t1 | AT5G61430 | 42.056 | 107 | 57 | 2 | 65 | 171 | 6 | 107 | 1.49e-22 | 92.0 |
| MS.gene063279.t1 | AT3G44350 | 36.025 | 161 | 91 | 5 | 17 | 170 | 8 | 163 | 4.73e-22 | 90.1 |
| MS.gene063279.t1 | AT1G56010 | 41.346 | 104 | 57 | 2 | 69 | 172 | 10 | 109 | 9.70e-22 | 89.7 |
| MS.gene063279.t1 | AT3G04420 | 38.760 | 129 | 71 | 3 | 15 | 137 | 4 | 130 | 3.02e-21 | 89.0 |
| MS.gene063279.t1 | AT3G04420 | 38.931 | 131 | 68 | 4 | 15 | 137 | 4 | 130 | 4.05e-21 | 89.4 |
| MS.gene063279.t1 | AT1G01010 | 38.060 | 134 | 69 | 4 | 17 | 138 | 6 | 137 | 1.49e-20 | 88.6 |
| MS.gene063279.t1 | AT3G10490 | 46.341 | 82 | 36 | 3 | 84 | 164 | 1 | 75 | 7.18e-19 | 83.2 |
| MS.gene063279.t1 | AT3G10490 | 46.341 | 82 | 36 | 3 | 84 | 164 | 1 | 75 | 7.18e-19 | 83.2 |
| MS.gene063279.t1 | AT1G02220 | 38.760 | 129 | 68 | 4 | 15 | 137 | 4 | 127 | 5.94e-18 | 80.9 |
| MS.gene063279.t1 | AT2G18060 | 45.556 | 90 | 39 | 4 | 90 | 179 | 2 | 81 | 1.38e-17 | 79.0 |
| MS.gene063279.t1 | AT2G43000 | 43.617 | 94 | 47 | 2 | 77 | 170 | 5 | 92 | 1.52e-17 | 77.0 |
| MS.gene063279.t1 | AT3G56530 | 31.056 | 161 | 87 | 6 | 14 | 164 | 52 | 198 | 9.55e-17 | 77.0 |
| MS.gene063279.t1 | AT3G04430 | 33.333 | 177 | 95 | 7 | 20 | 175 | 6 | 180 | 9.33e-16 | 72.4 |
| MS.gene063279.t1 | AT4G28530 | 28.571 | 168 | 102 | 2 | 7 | 156 | 3 | 170 | 7.13e-15 | 71.6 |
| MS.gene063279.t1 | AT5G22290 | 38.144 | 97 | 42 | 4 | 91 | 186 | 2 | 81 | 3.11e-13 | 66.2 |
| MS.gene063279.t1 | AT1G28470 | 31.875 | 160 | 87 | 9 | 2 | 143 | 66 | 221 | 9.77e-13 | 65.9 |
| MS.gene063279.t1 | AT3G55210 | 24.855 | 173 | 103 | 4 | 14 | 170 | 11 | 172 | 4.39e-12 | 63.5 |
Find 45 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAACATTAATCTCGAATT+AGG | 0.265228 | 4.2:-7301909 | None:intergenic |
| AAAAGAAGTGGTATAGAATA+TGG | 0.284193 | 4.2:+7301861 | MS.gene063279:CDS |
| ATTTCTATACTTTGCTTCCT+TGG | 0.288379 | 4.2:-7301353 | None:intergenic |
| AATCAGTTCTAGACCCATTT+GGG | 0.329258 | 4.2:-7301507 | None:intergenic |
| GAACAACAAAATGTGGATAT+TGG | 0.340464 | 4.2:+7301392 | MS.gene063279:CDS |
| TCAACTTGTAATGGCATTGT+AGG | 0.349375 | 4.2:+7301448 | MS.gene063279:CDS |
| CAATCAGTTCTAGACCCATT+TGG | 0.376037 | 4.2:-7301508 | None:intergenic |
| ATTTCATCTTCAACTTGTAA+TGG | 0.394997 | 4.2:+7301439 | MS.gene063279:CDS |
| TGTGGATATTGGAAGGCAAC+AGG | 0.396475 | 4.2:+7301403 | MS.gene063279:CDS |
| CAGAACTATGGAAATGAGAT+AGG | 0.425461 | 4.2:+7301807 | MS.gene063279:intron |
| TGTTTGCAAGTATGATCCTT+GGG | 0.435717 | 4.2:+7300843 | MS.gene063279:CDS |
| CAAAGTATAGAAATAGTAAT+CGG | 0.458697 | 4.2:+7301362 | MS.gene063279:CDS |
| TTCTGTGTCGGTTATCTGTA+AGG | 0.460976 | 4.2:+7301838 | MS.gene063279:CDS |
| AACATTGACCTCAGGAATGA+TGG | 0.468324 | 4.2:-7300824 | None:intergenic |
| AACACAAGCTCTTCATCTGT+TGG | 0.471066 | 4.2:-7300757 | None:intergenic |
| CAAGCTCTTCATCTGTTGGT+TGG | 0.493179 | 4.2:-7300753 | None:intergenic |
| TATGAAGGGAAATCCCCAAA+TGG | 0.497265 | 4.2:+7301493 | MS.gene063279:CDS |
| TGGAAATGAGATAGGAGAAT+GGG | 0.504294 | 4.2:+7301815 | MS.gene063279:CDS |
| TATGATCCTTGGGATTTGCC+AGG | 0.504380 | 4.2:+7300853 | MS.gene063279:CDS |
| ATGTTTGCAAGTATGATCCT+TGG | 0.507170 | 4.2:+7300842 | MS.gene063279:CDS |
| AGGAATGATGGAAGCAGGCA+AGG | 0.516507 | 4.2:-7300812 | None:intergenic |
| ACCTCAGGAATGATGGAAGC+AGG | 0.516623 | 4.2:-7300817 | None:intergenic |
| ATGAAGGGAAATCCCCAAAT+GGG | 0.516990 | 4.2:+7301494 | MS.gene063279:CDS |
| AACAAAATGTGGATATTGGA+AGG | 0.533417 | 4.2:+7301396 | MS.gene063279:CDS |
| GCCTGCTTCCATCATTCCTG+AGG | 0.534650 | 4.2:+7300816 | MS.gene063279:CDS |
| CAACTTGTAATGGCATTGTA+GGG | 0.535602 | 4.2:+7301449 | MS.gene063279:CDS |
| ATGGAAATGAGATAGGAGAA+TGG | 0.536346 | 4.2:+7301814 | MS.gene063279:CDS |
| TACTTGCAAACATTGACCTC+AGG | 0.544904 | 4.2:-7300832 | None:intergenic |
| GGAATGATGGAAGCAGGCAA+GGG | 0.549247 | 4.2:-7300811 | None:intergenic |
| CAAATGGGTCTAGAACTGAT+TGG | 0.560786 | 4.2:+7301509 | MS.gene063279:CDS |
| ATGAGTAGAACAACAAAATG+TGG | 0.563550 | 4.2:+7301385 | MS.gene063279:CDS |
| AACATTAATCTCGAATTAGG+AGG | 0.573486 | 4.2:-7301906 | None:intergenic |
| TACTGACCTGGCAAATCCCA+AGG | 0.595838 | 4.2:-7300859 | None:intergenic |
| TAGGAGAATGGGTTCTGTGT+CGG | 0.601018 | 4.2:+7301826 | MS.gene063279:CDS |
| TAGTAGTTTCCACATTGATG+AGG | 0.604094 | 4.2:-7301549 | None:intergenic |
| GGAGTGAGTAGATTGCCTCC+TGG | 0.605400 | 4.2:+7300721 | MS.gene063279:CDS |
| GTGGATATTGGAAGGCAACA+GGG | 0.617430 | 4.2:+7301404 | MS.gene063279:CDS |
| ATCAGTTCTAGACCCATTTG+GGG | 0.628898 | 4.2:-7301506 | None:intergenic |
| GTTGGTTGGAAACGAAAACC+AGG | 0.630000 | 4.2:-7300739 | None:intergenic |
| GAATGATGGAAGCAGGCAAG+GGG | 0.638798 | 4.2:-7300810 | None:intergenic |
| TGAATATCGCCTCATCAATG+TGG | 0.647802 | 4.2:+7301540 | MS.gene063279:CDS |
| AACTACTAACAACTCAACCC+AGG | 0.658665 | 4.2:+7301564 | MS.gene063279:CDS |
| TTATCTGTAAGGAAAAGAAG+TGG | 0.666564 | 4.2:+7301849 | MS.gene063279:CDS |
| GAGGTTGTGATGAACAAGAG+AGG | 0.686120 | 4.2:+7301317 | MS.gene063279:CDS |
| GGTTGGAAACGAAAACCAGG+AGG | 0.757632 | 4.2:-7300736 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTATTTAGTGTAAAAA+AGG | - | chr4.2:7301125-7301144 | None:intergenic | 10.0% |
| !!! | CTTTTCTAAAAAAAAATTTA+TGG | + | chr4.2:7300990-7301009 | MS.gene063279:intron | 10.0% |
| !!! | AAGCTGAATTTTATTAAAAA+TGG | + | chr4.2:7300700-7300719 | MS.gene063279:CDS | 15.0% |
| !!! | TAAATCTTATTAACTAGTTT+TGG | + | chr4.2:7301195-7301214 | MS.gene063279:intron | 15.0% |
| !! | CAAAGTATAGAAATAGTAAT+CGG | + | chr4.2:7301362-7301381 | MS.gene063279:CDS | 20.0% |
| !! | GAAATTATAACTTTAAGCAA+CGG | + | chr4.2:7301614-7301633 | MS.gene063279:intron | 20.0% |
| !! | TAGCCATTAACAAATAATAA+AGG | + | chr4.2:7301245-7301264 | MS.gene063279:intron | 20.0% |
| !! | TTGTAAAAAAAAATCAACGT+TGG | + | chr4.2:7300960-7300979 | MS.gene063279:intron | 20.0% |
| !!! | TAATTTAACTTTTTTTGGGT+TGG | + | chr4.2:7301784-7301803 | MS.gene063279:intron | 20.0% |
| !!! | TCTCCTTTATTATTTGTTAA+TGG | - | chr4.2:7301251-7301270 | None:intergenic | 20.0% |
| !!! | TTAACATTGTTTTGTTTGAT+TGG | + | chr4.2:7301285-7301304 | MS.gene063279:intron | 20.0% |
| ! | AAAAAAAATTTATGGTAGCC+AGG | + | chr4.2:7300998-7301017 | MS.gene063279:intron | 25.0% |
| ! | AAAAGAAGTGGTATAGAATA+TGG | + | chr4.2:7301861-7301880 | MS.gene063279:CDS | 25.0% |
| ! | ATTTCATCTTCAACTTGTAA+TGG | + | chr4.2:7301439-7301458 | MS.gene063279:CDS | 25.0% |
| ! | GACAATGTATAATATATGCA+AGG | - | chr4.2:7301038-7301057 | None:intergenic | 25.0% |
| ! | TAACAAATTAATACTACACC+CGG | + | chr4.2:7300887-7300906 | MS.gene063279:intron | 25.0% |
| ! | TCAAACATTAATCTCGAATT+AGG | - | chr4.2:7301912-7301931 | None:intergenic | 25.0% |
| ! | TTTGTTTGATTGGTATGTAT+AGG | + | chr4.2:7301295-7301314 | MS.gene063279:intron | 25.0% |
| !!! | AAAACTTTGGTTTTCTATGA+AGG | + | chr4.2:7301478-7301497 | MS.gene063279:CDS | 25.0% |
| !!! | AAACTTTGGTTTTCTATGAA+GGG | + | chr4.2:7301479-7301498 | MS.gene063279:CDS | 25.0% |
| AAATGCGTAAGTAATTACCT+GGG | - | chr4.2:7301584-7301603 | None:intergenic | 30.0% | |
| AACAAAATGTGGATATTGGA+AGG | + | chr4.2:7301396-7301415 | MS.gene063279:CDS | 30.0% | |
| AACAAATTAATACTACACCC+GGG | + | chr4.2:7300888-7300907 | MS.gene063279:intron | 30.0% | |
| AACATTAATCTCGAATTAGG+AGG | - | chr4.2:7301909-7301928 | None:intergenic | 30.0% | |
| ATGAGTAGAACAACAAAATG+TGG | + | chr4.2:7301385-7301404 | MS.gene063279:CDS | 30.0% | |
| ATTTCTATACTTTGCTTCCT+TGG | - | chr4.2:7301356-7301375 | None:intergenic | 30.0% | |
| GAACAACAAAATGTGGATAT+TGG | + | chr4.2:7301392-7301411 | MS.gene063279:CDS | 30.0% | |
| TGTATAATATATGCAAGGTC+TGG | - | chr4.2:7301033-7301052 | None:intergenic | 30.0% | |
| TTATCTGTAAGGAAAAGAAG+TGG | + | chr4.2:7301849-7301868 | MS.gene063279:CDS | 30.0% | |
| ! | CTCATTTTCACAAAACTGAT+TGG | + | chr4.2:7300916-7300935 | MS.gene063279:intron | 30.0% |
| !! | TTTGTTATTAGTTACTGACC+TGG | - | chr4.2:7300874-7300893 | None:intergenic | 30.0% |
| ATGGAAATGAGATAGGAGAA+TGG | + | chr4.2:7301814-7301833 | MS.gene063279:CDS | 35.0% | |
| ATGTTTGCAAGTATGATCCT+TGG | + | chr4.2:7300842-7300861 | MS.gene063279:CDS | 35.0% | |
| CAAATGCGTAAGTAATTACC+TGG | - | chr4.2:7301585-7301604 | None:intergenic | 35.0% | |
| CAACTTGTAATGGCATTGTA+GGG | + | chr4.2:7301449-7301468 | MS.gene063279:CDS | 35.0% | |
| CAGAACTATGGAAATGAGAT+AGG | + | chr4.2:7301807-7301826 | MS.gene063279:intron | 35.0% | |
| GTTTGATTGGTATGTATAGG+AGG | + | chr4.2:7301298-7301317 | MS.gene063279:intron | 35.0% | |
| TAGTAGTTTCCACATTGATG+AGG | - | chr4.2:7301552-7301571 | None:intergenic | 35.0% | |
| TCAACTTGTAATGGCATTGT+AGG | + | chr4.2:7301448-7301467 | MS.gene063279:CDS | 35.0% | |
| TGGAAATGAGATAGGAGAAT+GGG | + | chr4.2:7301815-7301834 | MS.gene063279:CDS | 35.0% | |
| TGTAGGGCTAAGAAAAACTT+TGG | + | chr4.2:7301465-7301484 | MS.gene063279:CDS | 35.0% | |
| TGTTTGCAAGTATGATCCTT+GGG | + | chr4.2:7300843-7300862 | MS.gene063279:CDS | 35.0% | |
| TTGTGAAAATGAGTTAGACC+CGG | - | chr4.2:7300909-7300928 | None:intergenic | 35.0% | |
| !! | AATCAGTTCTAGACCCATTT+GGG | - | chr4.2:7301510-7301529 | None:intergenic | 35.0% |
| AACACAAGCTCTTCATCTGT+TGG | - | chr4.2:7300760-7300779 | None:intergenic | 40.0% | |
| AACATTGACCTCAGGAATGA+TGG | - | chr4.2:7300827-7300846 | None:intergenic | 40.0% | |
| AACTACTAACAACTCAACCC+AGG | + | chr4.2:7301564-7301583 | MS.gene063279:CDS | 40.0% | |
| ATGAAGGGAAATCCCCAAAT+GGG | + | chr4.2:7301494-7301513 | MS.gene063279:CDS | 40.0% | |
| TACTTGCAAACATTGACCTC+AGG | - | chr4.2:7300835-7300854 | None:intergenic | 40.0% | |
| TATGAAGGGAAATCCCCAAA+TGG | + | chr4.2:7301493-7301512 | MS.gene063279:CDS | 40.0% | |
| TGAATATCGCCTCATCAATG+TGG | + | chr4.2:7301540-7301559 | MS.gene063279:CDS | 40.0% | |
| TGTGAAAATGAGTTAGACCC+GGG | - | chr4.2:7300908-7300927 | None:intergenic | 40.0% | |
| ! | AAGGTCTGGAATTCAAATCC+TGG | - | chr4.2:7301019-7301038 | None:intergenic | 40.0% |
| ! | CAAATGGGTCTAGAACTGAT+TGG | + | chr4.2:7301509-7301528 | MS.gene063279:CDS | 40.0% |
| ! | TGAGCTTAGATCAGTTGGTA+GGG | - | chr4.2:7301060-7301079 | None:intergenic | 40.0% |
| !! | ATCAGTTCTAGACCCATTTG+GGG | - | chr4.2:7301509-7301528 | None:intergenic | 40.0% |
| !! | CAATCAGTTCTAGACCCATT+TGG | - | chr4.2:7301511-7301530 | None:intergenic | 40.0% |
| !! | TTCTGTGTCGGTTATCTGTA+AGG | + | chr4.2:7301838-7301857 | MS.gene063279:CDS | 40.0% |
| !!! | TTTTTGGGTTGGCAGAACTA+TGG | + | chr4.2:7301795-7301814 | MS.gene063279:intron | 40.0% |
| CAAGCTCTTCATCTGTTGGT+TGG | - | chr4.2:7300756-7300775 | None:intergenic | 45.0% | |
| GAGGTTGTGATGAACAAGAG+AGG | + | chr4.2:7301317-7301336 | MS.gene063279:CDS | 45.0% | |
| GTGAGCTTAGATCAGTTGGT+AGG | - | chr4.2:7301061-7301080 | None:intergenic | 45.0% | |
| GTGGATATTGGAAGGCAACA+GGG | + | chr4.2:7301404-7301423 | MS.gene063279:CDS | 45.0% | |
| GTTGGTTGGAAACGAAAACC+AGG | - | chr4.2:7300742-7300761 | None:intergenic | 45.0% | |
| TATGATCCTTGGGATTTGCC+AGG | + | chr4.2:7300853-7300872 | MS.gene063279:CDS | 45.0% | |
| TGTGGATATTGGAAGGCAAC+AGG | + | chr4.2:7301403-7301422 | MS.gene063279:CDS | 45.0% | |
| ! | TAGGAGAATGGGTTCTGTGT+CGG | + | chr4.2:7301826-7301845 | MS.gene063279:CDS | 45.0% |
| !!! | AATATAATTTAACTTTTTTT+GGG | + | chr4.2:7301780-7301799 | MS.gene063279:intron | 5.0% |
| !!! | TAATATAATTTAACTTTTTT+TGG | + | chr4.2:7301779-7301798 | MS.gene063279:intron | 5.0% |
| CCAACTGATCTAAGCTCACG+AGG | + | chr4.2:7301062-7301081 | MS.gene063279:intron | 50.0% | |
| CCTCGTGAGCTTAGATCAGT+TGG | - | chr4.2:7301065-7301084 | None:intergenic | 50.0% | |
| GGTTGGAAACGAAAACCAGG+AGG | - | chr4.2:7300739-7300758 | None:intergenic | 50.0% | |
| TACTGACCTGGCAAATCCCA+AGG | - | chr4.2:7300862-7300881 | None:intergenic | 50.0% | |
| ! | ACCTCAGGAATGATGGAAGC+AGG | - | chr4.2:7300820-7300839 | None:intergenic | 50.0% |
| ! | AGGAATGATGGAAGCAGGCA+AGG | - | chr4.2:7300815-7300834 | None:intergenic | 50.0% |
| ! | GAATGATGGAAGCAGGCAAG+GGG | - | chr4.2:7300813-7300832 | None:intergenic | 50.0% |
| ! | GGAATGATGGAAGCAGGCAA+GGG | - | chr4.2:7300814-7300833 | None:intergenic | 50.0% |
| !!! | GAGGCACTTTTTCAGCTCCA+AGG | + | chr4.2:7301336-7301355 | MS.gene063279:CDS | 50.0% |
| GCCTGCTTCCATCATTCCTG+AGG | + | chr4.2:7300816-7300835 | MS.gene063279:CDS | 55.0% | |
| GGAGTGAGTAGATTGCCTCC+TGG | + | chr4.2:7300721-7300740 | MS.gene063279:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 7300694 | 7301941 | 7300694 | ID=MS.gene063279 |
| chr4.2 | mRNA | 7300694 | 7301941 | 7300694 | ID=MS.gene063279.t1;Parent=MS.gene063279 |
| chr4.2 | exon | 7300694 | 7300874 | 7300694 | ID=MS.gene063279.t1.exon1;Parent=MS.gene063279.t1 |
| chr4.2 | CDS | 7300694 | 7300874 | 7300694 | ID=cds.MS.gene063279.t1;Parent=MS.gene063279.t1 |
| chr4.2 | exon | 7301317 | 7301585 | 7301317 | ID=MS.gene063279.t1.exon2;Parent=MS.gene063279.t1 |
| chr4.2 | CDS | 7301317 | 7301585 | 7301317 | ID=cds.MS.gene063279.t1;Parent=MS.gene063279.t1 |
| chr4.2 | exon | 7301810 | 7301941 | 7301810 | ID=MS.gene063279.t1.exon3;Parent=MS.gene063279.t1 |
| chr4.2 | CDS | 7301810 | 7301941 | 7301810 | ID=cds.MS.gene063279.t1;Parent=MS.gene063279.t1 |
| Gene Sequence |
| Protein sequence |
