Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065369.t1 | ABN05708.1 | 96.7 | 241 | 8 | 0 | 3 | 243 | 11 | 251 | 1.10E-122 | 449.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065369.t1 | A2RVM0 | 61.5 | 234 | 89 | 1 | 5 | 238 | 8 | 240 | 5.0e-76 | 285.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065369.t1 | G7L0K2 | 96.7 | 241 | 8 | 0 | 3 | 243 | 11 | 251 | 7.8e-123 | 449.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene065369 | 0.814618 | 1.41E-51 | -1.69E-46 |
| MS.gene050020 | MS.gene065369 | 0.878197 | 3.41E-69 | -1.69E-46 |
| MS.gene05016 | MS.gene065369 | 0.810131 | 1.34E-50 | -1.69E-46 |
| MS.gene050584 | MS.gene065369 | 0.851349 | 9.40E-61 | -1.69E-46 |
| MS.gene050585 | MS.gene065369 | 0.828951 | 6.76E-55 | -1.69E-46 |
| MS.gene050586 | MS.gene065369 | 0.850954 | 1.22E-60 | -1.69E-46 |
| MS.gene050587 | MS.gene065369 | 0.835036 | 2.12E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene065369 | 0.832221 | 1.07E-55 | -1.69E-46 |
| MS.gene051789 | MS.gene065369 | 0.872498 | 3.04E-67 | -1.69E-46 |
| MS.gene052142 | MS.gene065369 | 0.80632 | 8.71E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene065369 | 0.828413 | 9.11E-55 | -1.69E-46 |
| MS.gene053074 | MS.gene065369 | 0.843438 | 1.40E-58 | -1.69E-46 |
| MS.gene053204 | MS.gene065369 | 0.804473 | 2.12E-49 | -1.69E-46 |
| MS.gene053383 | MS.gene065369 | 0.801212 | 1.00E-48 | -1.69E-46 |
| MS.gene05456 | MS.gene065369 | 0.860631 | 1.81E-63 | -1.69E-46 |
| MS.gene054596 | MS.gene065369 | 0.817393 | 3.37E-52 | -1.69E-46 |
| MS.gene055359 | MS.gene065369 | 0.805125 | 1.55E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene065369 | -0.808196 | 3.49E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene065369 | 0.802875 | 4.56E-49 | -1.69E-46 |
| MS.gene059006 | MS.gene065369 | 0.857364 | 1.72E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065369.t1 | MTR_7g099850 | 96.281 | 242 | 9 | 0 | 3 | 244 | 11 | 252 | 1.21e-172 | 479 |
| MS.gene065369.t1 | MTR_1g068970 | 85.477 | 241 | 34 | 1 | 3 | 243 | 11 | 250 | 1.92e-150 | 423 |
| MS.gene065369.t1 | MTR_1g068970 | 83.696 | 184 | 29 | 1 | 60 | 243 | 1 | 183 | 1.04e-110 | 320 |
| MS.gene065369.t1 | MTR_8g098415 | 60.759 | 237 | 92 | 1 | 5 | 241 | 8 | 243 | 4.63e-101 | 297 |
| MS.gene065369.t1 | MTR_8g098415 | 60.759 | 237 | 92 | 1 | 5 | 241 | 8 | 243 | 5.22e-101 | 297 |
| MS.gene065369.t1 | MTR_1g100335 | 58.039 | 255 | 106 | 1 | 5 | 259 | 8 | 261 | 8.41e-101 | 295 |
| MS.gene065369.t1 | MTR_1g100335 | 57.692 | 260 | 96 | 3 | 5 | 254 | 8 | 263 | 2.10e-100 | 294 |
| MS.gene065369.t1 | MTR_1g100395 | 61.966 | 234 | 88 | 1 | 5 | 238 | 8 | 240 | 7.97e-100 | 294 |
| MS.gene065369.t1 | MTR_1g100335 | 61.441 | 236 | 90 | 1 | 5 | 240 | 8 | 242 | 8.99e-100 | 294 |
| MS.gene065369.t1 | MTR_1g100305 | 59.746 | 236 | 94 | 1 | 5 | 240 | 8 | 242 | 1.05e-98 | 291 |
| MS.gene065369.t1 | MTR_1g100315 | 60.169 | 236 | 93 | 1 | 5 | 240 | 8 | 242 | 6.25e-98 | 290 |
| MS.gene065369.t1 | MTR_6g053600 | 60.870 | 230 | 89 | 1 | 7 | 236 | 4 | 232 | 4.03e-91 | 271 |
| MS.gene065369.t1 | MTR_6g053550 | 60.173 | 231 | 91 | 1 | 6 | 236 | 17 | 246 | 1.09e-90 | 271 |
| MS.gene065369.t1 | MTR_8g098415 | 61.033 | 213 | 82 | 1 | 5 | 217 | 8 | 219 | 2.41e-89 | 264 |
| MS.gene065369.t1 | MTR_3g077410 | 52.941 | 238 | 108 | 2 | 3 | 237 | 11 | 247 | 1.79e-80 | 246 |
| MS.gene065369.t1 | MTR_4g105310 | 51.681 | 238 | 111 | 2 | 3 | 237 | 22 | 258 | 7.90e-78 | 237 |
| MS.gene065369.t1 | MTR_4g105310 | 51.681 | 238 | 111 | 2 | 3 | 237 | 22 | 258 | 6.05e-77 | 237 |
| MS.gene065369.t1 | MTR_8g099995 | 52.697 | 241 | 102 | 3 | 4 | 237 | 12 | 247 | 2.62e-76 | 235 |
| MS.gene065369.t1 | MTR_8g098415 | 58.824 | 187 | 76 | 1 | 55 | 241 | 1 | 186 | 2.73e-73 | 225 |
| MS.gene065369.t1 | MTR_2g079710 | 34.156 | 243 | 119 | 8 | 28 | 237 | 88 | 322 | 4.82e-24 | 100 |
| MS.gene065369.t1 | MTR_6g081020 | 34.375 | 224 | 126 | 6 | 25 | 237 | 60 | 273 | 1.04e-23 | 99.0 |
| MS.gene065369.t1 | MTR_3g009190 | 31.839 | 223 | 130 | 6 | 30 | 237 | 66 | 281 | 4.35e-20 | 89.0 |
| MS.gene065369.t1 | MTR_3g009190 | 31.839 | 223 | 130 | 6 | 30 | 237 | 84 | 299 | 4.39e-20 | 89.0 |
| MS.gene065369.t1 | MTR_6g453040 | 30.942 | 223 | 132 | 6 | 30 | 237 | 44 | 259 | 2.97e-19 | 86.3 |
| MS.gene065369.t1 | MTR_8g022500 | 42.478 | 113 | 40 | 1 | 31 | 143 | 431 | 518 | 1.24e-17 | 82.4 |
| MS.gene065369.t1 | MTR_3g009190 | 30.942 | 223 | 132 | 6 | 30 | 237 | 65 | 280 | 1.38e-17 | 81.6 |
| MS.gene065369.t1 | MTR_6g041980 | 26.341 | 205 | 141 | 3 | 30 | 234 | 70 | 264 | 8.73e-17 | 79.3 |
| MS.gene065369.t1 | MTR_3g091070 | 29.439 | 214 | 129 | 7 | 30 | 237 | 44 | 241 | 1.03e-16 | 79.0 |
| MS.gene065369.t1 | MTR_6g453040 | 29.412 | 204 | 120 | 5 | 30 | 218 | 66 | 260 | 1.27e-15 | 75.5 |
| MS.gene065369.t1 | MTR_6g041980 | 26.562 | 192 | 127 | 3 | 30 | 215 | 70 | 253 | 7.97e-15 | 72.8 |
| MS.gene065369.t1 | MTR_6g453040 | 30.405 | 148 | 93 | 3 | 30 | 171 | 66 | 209 | 6.87e-13 | 67.0 |
| MS.gene065369.t1 | MTR_7g106800 | 31.395 | 172 | 102 | 5 | 29 | 194 | 11 | 172 | 1.41e-11 | 63.5 |
| MS.gene065369.t1 | MTR_1g100345 | 45.455 | 66 | 36 | 0 | 30 | 95 | 4 | 69 | 1.74e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065369.t1 | AT2G37540 | 69.710 | 241 | 72 | 1 | 5 | 245 | 12 | 251 | 8.72e-125 | 356 |
| MS.gene065369.t1 | AT2G37540 | 68.980 | 245 | 75 | 1 | 5 | 249 | 12 | 255 | 1.56e-123 | 355 |
| MS.gene065369.t1 | AT5G02540 | 68.333 | 240 | 75 | 1 | 5 | 244 | 12 | 250 | 4.15e-110 | 321 |
| MS.gene065369.t1 | AT4G11410 | 62.025 | 237 | 89 | 1 | 5 | 241 | 8 | 243 | 3.59e-105 | 306 |
| MS.gene065369.t1 | AT4G11410 | 62.025 | 237 | 89 | 1 | 5 | 241 | 8 | 243 | 2.82e-104 | 306 |
| MS.gene065369.t1 | AT4G23430 | 61.538 | 234 | 89 | 1 | 5 | 238 | 8 | 240 | 8.40e-104 | 305 |
| MS.gene065369.t1 | AT4G23420 | 60.684 | 234 | 91 | 1 | 5 | 238 | 8 | 240 | 6.18e-102 | 298 |
| MS.gene065369.t1 | AT4G23420 | 60.684 | 234 | 91 | 1 | 5 | 238 | 8 | 240 | 7.89e-102 | 298 |
| MS.gene065369.t1 | AT4G23420 | 60.684 | 234 | 91 | 1 | 5 | 238 | 8 | 240 | 2.94e-101 | 298 |
| MS.gene065369.t1 | AT4G23420 | 60.684 | 234 | 91 | 1 | 5 | 238 | 8 | 240 | 2.94e-101 | 298 |
| MS.gene065369.t1 | AT4G23430 | 61.111 | 234 | 88 | 2 | 5 | 238 | 8 | 238 | 8.83e-101 | 297 |
| MS.gene065369.t1 | AT4G23420 | 60.776 | 232 | 90 | 1 | 7 | 238 | 27 | 257 | 2.62e-100 | 296 |
| MS.gene065369.t1 | AT4G23430 | 57.692 | 234 | 88 | 2 | 5 | 238 | 8 | 230 | 1.53e-93 | 278 |
| MS.gene065369.t1 | AT4G23430 | 57.265 | 234 | 87 | 3 | 5 | 238 | 8 | 228 | 1.67e-90 | 271 |
| MS.gene065369.t1 | AT4G24050 | 55.085 | 236 | 103 | 2 | 4 | 237 | 12 | 246 | 5.62e-82 | 248 |
| MS.gene065369.t1 | AT4G24050 | 55.085 | 236 | 103 | 2 | 4 | 237 | 12 | 246 | 1.90e-81 | 248 |
| MS.gene065369.t1 | AT5G50130 | 51.899 | 237 | 111 | 2 | 3 | 237 | 11 | 246 | 3.50e-77 | 235 |
| MS.gene065369.t1 | AT5G50130 | 51.899 | 237 | 111 | 2 | 3 | 237 | 11 | 246 | 1.58e-76 | 235 |
| MS.gene065369.t1 | AT5G50130 | 51.681 | 238 | 111 | 3 | 3 | 237 | 11 | 247 | 4.97e-76 | 232 |
| MS.gene065369.t1 | AT5G50130 | 51.681 | 238 | 111 | 3 | 3 | 237 | 11 | 247 | 2.22e-75 | 233 |
| MS.gene065369.t1 | AT5G50130 | 51.681 | 238 | 111 | 3 | 3 | 237 | 11 | 247 | 3.64e-75 | 233 |
| MS.gene065369.t1 | AT1G64590 | 51.754 | 228 | 103 | 3 | 14 | 237 | 22 | 246 | 1.95e-65 | 207 |
| MS.gene065369.t1 | AT5G50130 | 49.519 | 208 | 104 | 1 | 30 | 237 | 7 | 213 | 3.43e-64 | 203 |
| MS.gene065369.t1 | AT5G50130 | 49.519 | 208 | 104 | 1 | 30 | 237 | 7 | 213 | 4.30e-64 | 203 |
| MS.gene065369.t1 | AT5G50130 | 49.282 | 209 | 104 | 2 | 30 | 237 | 7 | 214 | 4.64e-63 | 200 |
| MS.gene065369.t1 | AT5G50130 | 49.282 | 209 | 104 | 2 | 30 | 237 | 7 | 214 | 5.04e-63 | 200 |
| MS.gene065369.t1 | AT5G54190 | 32.917 | 240 | 122 | 8 | 30 | 237 | 96 | 328 | 2.08e-26 | 107 |
| MS.gene065369.t1 | AT4G27440 | 32.824 | 262 | 135 | 8 | 11 | 237 | 69 | 324 | 4.67e-25 | 103 |
| MS.gene065369.t1 | AT4G27440 | 32.824 | 262 | 135 | 8 | 11 | 237 | 69 | 324 | 4.67e-25 | 103 |
| MS.gene065369.t1 | AT5G53090 | 35.160 | 219 | 129 | 5 | 25 | 237 | 55 | 266 | 1.07e-23 | 99.0 |
| MS.gene065369.t1 | AT1G03630 | 35.000 | 240 | 120 | 8 | 28 | 237 | 89 | 322 | 5.89e-23 | 97.4 |
| MS.gene065369.t1 | AT1G03630 | 35.000 | 240 | 120 | 8 | 28 | 237 | 91 | 324 | 6.12e-23 | 97.4 |
| MS.gene065369.t1 | AT4G27760 | 32.618 | 233 | 142 | 6 | 25 | 250 | 56 | 280 | 7.92e-23 | 96.7 |
| MS.gene065369.t1 | AT5G54190 | 32.178 | 202 | 107 | 6 | 55 | 233 | 1 | 195 | 3.86e-20 | 87.8 |
| MS.gene065369.t1 | AT5G53100 | 36.937 | 222 | 123 | 6 | 25 | 237 | 43 | 256 | 3.95e-20 | 89.0 |
| MS.gene065369.t1 | AT4G09750 | 27.805 | 205 | 138 | 4 | 30 | 234 | 47 | 241 | 7.23e-20 | 87.8 |
| MS.gene065369.t1 | AT5G15940 | 27.419 | 248 | 152 | 7 | 9 | 237 | 41 | 279 | 1.73e-18 | 84.0 |
| MS.gene065369.t1 | AT5G15940 | 27.419 | 248 | 152 | 7 | 9 | 237 | 40 | 278 | 1.77e-18 | 84.3 |
| MS.gene065369.t1 | AT5G15940 | 27.419 | 248 | 152 | 7 | 9 | 237 | 41 | 279 | 1.81e-18 | 84.3 |
| MS.gene065369.t1 | AT5G15940 | 27.419 | 248 | 152 | 7 | 9 | 237 | 41 | 279 | 1.81e-18 | 84.3 |
| MS.gene065369.t1 | AT5G04070 | 26.009 | 223 | 143 | 6 | 30 | 237 | 62 | 277 | 2.82e-15 | 75.1 |
| MS.gene065369.t1 | AT5G61830 | 26.693 | 251 | 134 | 8 | 29 | 239 | 39 | 279 | 1.44e-11 | 63.9 |
| MS.gene065369.t1 | AT5G61830 | 26.693 | 251 | 134 | 8 | 29 | 239 | 39 | 279 | 1.44e-11 | 63.9 |
Find 63 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAAGAGTGTTGGCTCTT+AGG | 0.271288 | 7.4:-10401230 | MS.gene065369:CDS |
| ATGGCTGGTCCAAGTGGGTT+TGG | 0.308042 | 7.4:-10405671 | MS.gene065369:CDS |
| CCAAGCTTGAAAGGTGTAAC+TGG | 0.309880 | 7.4:-10398296 | MS.gene065369:CDS |
| GCAGGAGGAGCAAGTGGTAT+AGG | 0.327892 | 7.4:-10401261 | MS.gene065369:intron |
| CAGTTACACCTTTCAAGCTT+GGG | 0.356891 | 7.4:+10398297 | None:intergenic |
| TGCAAAAGCAACTGGAATAG+AGG | 0.360987 | 7.4:-10399741 | MS.gene065369:CDS |
| CCAGTTACACCTTTCAAGCT+TGG | 0.371917 | 7.4:+10398296 | None:intergenic |
| GAAGATTTGTCAAGAGGAAA+TGG | 0.402419 | 7.4:+10399786 | None:intergenic |
| CAGGAGGAGCAAGTGGTATA+GGG | 0.417261 | 7.4:-10401260 | MS.gene065369:CDS |
| ATGTAATATGTTGGCTAACT+TGG | 0.417541 | 7.4:+10399502 | None:intergenic |
| TAGATACACTTACTTTAGAA+AGG | 0.428762 | 7.4:-10399687 | MS.gene065369:CDS |
| AAACAAACTGCAAAAGCAAC+TGG | 0.438605 | 7.4:-10399749 | MS.gene065369:CDS |
| AGAGGAGTCATTATCACTCC+TGG | 0.445561 | 7.4:+10399218 | None:intergenic |
| TCCCTCCTCTGAGAGTTTGA+AGG | 0.466137 | 7.4:+10400202 | None:intergenic |
| TTCATTTGCATGTAATATGT+TGG | 0.469410 | 7.4:+10399493 | None:intergenic |
| ATCAGCTTCAACTGCAGAGC+AGG | 0.470999 | 7.4:-10405648 | MS.gene065369:CDS |
| CAATTTGCAACAAACCATCT+TGG | 0.474711 | 7.4:-10400170 | MS.gene065369:intron |
| TGTAACTGGGAAGTACTTTG+TGG | 0.484126 | 7.4:-10398282 | MS.gene065369:CDS |
| TATTCTAGCAAGAAGGCCTA+TGG | 0.494558 | 7.4:-10399530 | MS.gene065369:CDS |
| TATCAGTTATTCTAGCAAGA+AGG | 0.496219 | 7.4:-10399537 | MS.gene065369:intron |
| AAAGTCTGTCCGATCATTCG+TGG | 0.498241 | 7.4:-10401088 | MS.gene065369:CDS |
| CAAGAAGAAGATTTGTCAAG+AGG | 0.511567 | 7.4:+10399780 | None:intergenic |
| TGAACTCTCTCGTCGCCTGC+AGG | 0.512345 | 7.4:-10399474 | MS.gene065369:intron |
| CCCTCCTCTGAGAGTTTGAA+GGG | 0.512532 | 7.4:+10400203 | None:intergenic |
| AGGAGCAAGTGGTATAGGGT+TGG | 0.516651 | 7.4:-10401256 | MS.gene065369:CDS |
| GCAAAAGCAACTGGAATAGA+GGG | 0.523925 | 7.4:-10399740 | MS.gene065369:CDS |
| CACTCCTGGGTGGACAGAGT+TGG | 0.526311 | 7.4:+10399232 | None:intergenic |
| AGATACACTTACTTTAGAAA+GGG | 0.527699 | 7.4:-10399686 | MS.gene065369:CDS |
| GCACTCCACCCAAGCTTGAA+AGG | 0.529412 | 7.4:-10398305 | MS.gene065369:CDS |
| TCGTTGATAACAGGGATGGC+TGG | 0.541160 | 7.4:-10405686 | MS.gene065369:intron |
| GGCTAACTTGGACTGTCCAT+AGG | 0.541676 | 7.4:+10399514 | None:intergenic |
| TAAATGAGACATTACCAAGA+TGG | 0.541735 | 7.4:+10400156 | None:intergenic |
| AATATTGGCAGAAACAATGC+TGG | 0.547510 | 7.4:-10400239 | MS.gene065369:intron |
| TGAAGTTGTCCACGAATGAT+CGG | 0.551458 | 7.4:+10401079 | None:intergenic |
| TTACACCTTTCAAGCTTGGG+TGG | 0.554418 | 7.4:+10398300 | None:intergenic |
| CCCCTTCAAACTCTCAGAGG+AGG | 0.559987 | 7.4:-10400204 | MS.gene065369:CDS |
| AACCTTACCGCAATTATCAC+AGG | 0.568859 | 7.4:-10405602 | MS.gene065369:intron |
| GAAGCTGATCCAAACCCACT+TGG | 0.575613 | 7.4:+10405662 | None:intergenic |
| AAGAGTGTTGGCTCTTAGGA+AGG | 0.576770 | 7.4:-10401226 | MS.gene065369:CDS |
| CCCTTCAAACTCTCAGAGGA+GGG | 0.579093 | 7.4:-10400203 | MS.gene065369:CDS |
| CAAGCTTGAAAGGTGTAACT+GGG | 0.589171 | 7.4:-10398295 | MS.gene065369:CDS |
| ATTAATGCAGGAGGAGCAAG+TGG | 0.593577 | 7.4:-10401267 | MS.gene065369:intron |
| GGAGAACAAATGTGCACGAG+TGG | 0.593781 | 7.4:-10401139 | MS.gene065369:CDS |
| GAGGAGTCATTATCACTCCT+GGG | 0.595234 | 7.4:+10399219 | None:intergenic |
| ACTGCAGAGCAGGTTACTGA+AGG | 0.606028 | 7.4:-10405638 | MS.gene065369:CDS |
| CACATTTGTCAACAGGAAGA+GGG | 0.607675 | 7.4:-10399269 | MS.gene065369:intron |
| TACCTGTGATAATTGCGGTA+AGG | 0.607899 | 7.4:+10405600 | None:intergenic |
| GTTGGAGACAACAAGAGTGT+TGG | 0.608274 | 7.4:-10401238 | MS.gene065369:CDS |
| ACAAACATTAAGATGTTGAG+AGG | 0.608894 | 7.4:+10401042 | None:intergenic |
| GGACAGACTTTGTTGAGCAT+AGG | 0.619279 | 7.4:+10401100 | None:intergenic |
| ACAGGGATGGCTGGTCCAAG+TGG | 0.620606 | 7.4:-10405677 | MS.gene065369:intron |
| TAAGAAGAATATCTCATGAG+AGG | 0.620624 | 7.4:+10399200 | None:intergenic |
| AACACTACCTGTGATAATTG+CGG | 0.627482 | 7.4:+10405595 | None:intergenic |
| TTCTTGCAGCAATGATAACA+CGG | 0.629325 | 7.4:+10401202 | None:intergenic |
| CTGCCCCTTCAAACTCTCAG+AGG | 0.632914 | 7.4:-10400207 | MS.gene065369:CDS |
| GAGTGCAACATAACATGTCG+TGG | 0.635678 | 7.4:+10398322 | None:intergenic |
| CAGGGATGGCTGGTCCAAGT+GGG | 0.650176 | 7.4:-10405676 | MS.gene065369:CDS |
| CCTCCTCTGAGAGTTTGAAG+GGG | 0.662584 | 7.4:+10400204 | None:intergenic |
| AAGAAACATTGAATCTGCAG+AGG | 0.666255 | 7.4:-10401184 | MS.gene065369:CDS |
| ACAGCCAACTCTGTCCACCC+AGG | 0.685876 | 7.4:-10399236 | MS.gene065369:CDS |
| AAGCAACTGGAATAGAGGGG+AGG | 0.690942 | 7.4:-10399736 | MS.gene065369:CDS |
| CAAAAGCAACTGGAATAGAG+GGG | 0.709374 | 7.4:-10399739 | MS.gene065369:CDS |
| GAGTCATTATCACTCCTGGG+TGG | 0.734865 | 7.4:+10399222 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 10398272 | 10406318 | 10398272 | ID=MS.gene065369 |
| chr7.4 | mRNA | 10398272 | 10406318 | 10398272 | ID=MS.gene065369.t1;Parent=MS.gene065369 |
| chr7.4 | exon | 10406315 | 10406318 | 10406315 | ID=MS.gene065369.t1.exon1;Parent=MS.gene065369.t1 |
| chr7.4 | CDS | 10406315 | 10406318 | 10406315 | ID=cds.MS.gene065369.t1;Parent=MS.gene065369.t1 |
| chr7.4 | exon | 10405603 | 10405695 | 10405603 | ID=MS.gene065369.t1.exon2;Parent=MS.gene065369.t1 |
| chr7.4 | CDS | 10405603 | 10405695 | 10405603 | ID=cds.MS.gene065369.t1;Parent=MS.gene065369.t1 |
| chr7.4 | exon | 10401048 | 10401279 | 10401048 | ID=MS.gene065369.t1.exon3;Parent=MS.gene065369.t1 |
| chr7.4 | CDS | 10401048 | 10401279 | 10401048 | ID=cds.MS.gene065369.t1;Parent=MS.gene065369.t1 |
| chr7.4 | exon | 10400171 | 10400250 | 10400171 | ID=MS.gene065369.t1.exon4;Parent=MS.gene065369.t1 |
| chr7.4 | CDS | 10400171 | 10400250 | 10400171 | ID=cds.MS.gene065369.t1;Parent=MS.gene065369.t1 |
| chr7.4 | exon | 10399653 | 10399809 | 10399653 | ID=MS.gene065369.t1.exon5;Parent=MS.gene065369.t1 |
| chr7.4 | CDS | 10399653 | 10399809 | 10399653 | ID=cds.MS.gene065369.t1;Parent=MS.gene065369.t1 |
| chr7.4 | exon | 10399475 | 10399553 | 10399475 | ID=MS.gene065369.t1.exon6;Parent=MS.gene065369.t1 |
| chr7.4 | CDS | 10399475 | 10399553 | 10399475 | ID=cds.MS.gene065369.t1;Parent=MS.gene065369.t1 |
| chr7.4 | exon | 10399192 | 10399276 | 10399192 | ID=MS.gene065369.t1.exon7;Parent=MS.gene065369.t1 |
| chr7.4 | CDS | 10399192 | 10399276 | 10399192 | ID=cds.MS.gene065369.t1;Parent=MS.gene065369.t1 |
| chr7.4 | exon | 10398272 | 10398351 | 10398272 | ID=MS.gene065369.t1.exon8;Parent=MS.gene065369.t1 |
| chr7.4 | CDS | 10398272 | 10398351 | 10398272 | ID=cds.MS.gene065369.t1;Parent=MS.gene065369.t1 |
| Gene Sequence |
| Protein sequence |
