Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053204.t1 | XP_003604258.1 | 94.4 | 376 | 21 | 0 | 1 | 376 | 1 | 376 | 2.00E-199 | 704.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053204.t1 | P49243 | 65.7 | 388 | 113 | 4 | 6 | 375 | 18 | 403 | 1.6e-141 | 503.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053204.t1 | G7JEG5 | 94.4 | 376 | 21 | 0 | 1 | 376 | 1 | 376 | 1.4e-199 | 704.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene053204 | 0.805318 | 1.41E-49 | -1.69E-46 |
| MS.gene049260 | MS.gene053204 | 0.839476 | 1.55E-57 | -1.69E-46 |
| MS.gene050128 | MS.gene053204 | 0.813712 | 2.23E-51 | -1.69E-46 |
| MS.gene050584 | MS.gene053204 | 0.801075 | 1.07E-48 | -1.69E-46 |
| MS.gene050762 | MS.gene053204 | 0.808648 | 2.79E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene053204 | 0.811106 | 8.26E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene053204 | 0.803283 | 3.75E-49 | -1.69E-46 |
| MS.gene051789 | MS.gene053204 | 0.847112 | 1.42E-59 | -1.69E-46 |
| MS.gene052178 | MS.gene053204 | 0.806908 | 6.55E-50 | -1.69E-46 |
| MS.gene053074 | MS.gene053204 | 0.87366 | 1.24E-67 | -1.69E-46 |
| MS.gene053204 | MS.gene054010 | 0.806137 | 9.52E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene054011 | 0.814794 | 1.28E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene054012 | 0.81044 | 1.15E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene054013 | 0.811489 | 6.83E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene054184 | 0.816724 | 4.77E-52 | -1.69E-46 |
| MS.gene053204 | MS.gene054185 | 0.810534 | 1.10E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene054214 | 0.808392 | 3.17E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene054379 | 0.807398 | 5.15E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene05456 | 0.808928 | 2.43E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene054596 | 0.892156 | 2.06E-74 | -1.69E-46 |
| MS.gene053204 | MS.gene055207 | 0.823513 | 1.33E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene055604 | 0.82013 | 8.07E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene057754 | 0.802978 | 4.34E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene059006 | 0.835866 | 1.31E-56 | -1.69E-46 |
| MS.gene053204 | MS.gene061362 | 0.901926 | 1.63E-78 | -1.69E-46 |
| MS.gene053204 | MS.gene061893 | 0.803747 | 3.01E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene062354 | 0.800343 | 1.51E-48 | -1.69E-46 |
| MS.gene053204 | MS.gene06339 | 0.81333 | 2.70E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene06367 | 0.831402 | 1.70E-55 | -1.69E-46 |
| MS.gene053204 | MS.gene063807 | 0.811939 | 5.45E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene065369 | 0.804473 | 2.12E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene066337 | 0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene067305 | 0.821463 | 3.98E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene068614 | 0.814731 | 1.33E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene069147 | 0.81334 | 2.69E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene070594 | 0.857723 | 1.34E-62 | -1.69E-46 |
| MS.gene053204 | MS.gene070595 | 0.851861 | 6.73E-61 | -1.69E-46 |
| MS.gene053204 | MS.gene070597 | 0.827574 | 1.45E-54 | -1.69E-46 |
| MS.gene053204 | MS.gene073340 | -0.811861 | 5.66E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene07942 | 0.839426 | 1.60E-57 | -1.69E-46 |
| MS.gene053204 | MS.gene08691 | 0.803 | 4.30E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene20359 | 0.815639 | 8.34E-52 | -1.69E-46 |
| MS.gene053204 | MS.gene20988 | 0.814203 | 1.74E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene21053 | 0.813832 | 2.10E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene22587 | 0.816642 | 4.98E-52 | -1.69E-46 |
| MS.gene053204 | MS.gene22855 | 0.806932 | 6.47E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene22856 | 0.800171 | 1.63E-48 | -1.69E-46 |
| MS.gene053204 | MS.gene23012 | 0.850378 | 1.77E-60 | -1.69E-46 |
| MS.gene053204 | MS.gene24039 | 0.832237 | 1.06E-55 | -1.69E-46 |
| MS.gene053204 | MS.gene24114 | 0.80606 | 9.88E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene25868 | 0.814154 | 1.78E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene28341 | 0.823508 | 1.33E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene29146 | 0.831813 | 1.35E-55 | -1.69E-46 |
| MS.gene053204 | MS.gene29822 | 0.815121 | 1.09E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene31609 | 0.80363 | 3.18E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene32000 | 0.804617 | 1.98E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene34106 | 0.806466 | 8.11E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene35428 | 0.859182 | 4.94E-63 | -1.69E-46 |
| MS.gene053204 | MS.gene35514 | 0.82586 | 3.72E-54 | -1.69E-46 |
| MS.gene053204 | MS.gene35592 | 0.812499 | 4.11E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene35695 | 0.854107 | 1.53E-61 | -1.69E-46 |
| MS.gene053204 | MS.gene35805 | 0.808189 | 3.50E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene38528 | 0.820222 | 7.69E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene38772 | 0.811156 | 8.06E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene39496 | 0.812097 | 5.03E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene39805 | 0.805534 | 1.27E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene40169 | 0.800519 | 1.39E-48 | -1.69E-46 |
| MS.gene053204 | MS.gene40751 | 0.818708 | 1.70E-52 | -1.69E-46 |
| MS.gene053204 | MS.gene40923 | 0.827667 | 1.38E-54 | -1.69E-46 |
| MS.gene053204 | MS.gene40950 | 0.801998 | 6.91E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene41839 | 0.820103 | 8.18E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene41915 | 0.812094 | 5.04E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene43899 | 0.820005 | 8.62E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene44055 | 0.801535 | 8.60E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene44274 | 0.809558 | 1.78E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene45085 | 0.86629 | 3.18E-65 | -1.69E-46 |
| MS.gene053204 | MS.gene46110 | 0.811986 | 5.32E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene48577 | 0.822561 | 2.22E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene49304 | 0.832383 | 9.75E-56 | -1.69E-46 |
| MS.gene053204 | MS.gene50621 | 0.830438 | 2.94E-55 | -1.69E-46 |
| MS.gene053204 | MS.gene51304 | 0.829842 | 4.10E-55 | -1.69E-46 |
| MS.gene053204 | MS.gene52621 | 0.803138 | 4.02E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene53305 | 0.811244 | 7.71E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene54407 | 0.810602 | 1.06E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene57643 | 0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene053204 | MS.gene57945 | 0.800691 | 1.28E-48 | -1.69E-46 |
| MS.gene053204 | MS.gene58270 | 0.84326 | 1.56E-58 | -1.69E-46 |
| MS.gene053204 | MS.gene59149 | 0.805627 | 1.22E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene62594 | 0.84282 | 2.05E-58 | -1.69E-46 |
| MS.gene053204 | MS.gene62720 | 0.841494 | 4.59E-58 | -1.69E-46 |
| MS.gene053204 | MS.gene64049 | 0.800198 | 1.61E-48 | -1.69E-46 |
| MS.gene053204 | MS.gene65399 | 0.886185 | 4.26E-72 | -1.69E-46 |
| MS.gene053204 | MS.gene66736 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene053204 | MS.gene67002 | 0.831832 | 1.33E-55 | -1.69E-46 |
| MS.gene053204 | MS.gene67384 | 0.805683 | 1.19E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene68151 | 0.824878 | 6.36E-54 | -1.69E-46 |
| MS.gene053204 | MS.gene68338 | 0.807243 | 5.56E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene71353 | 0.81117 | 8.00E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene71551 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene74992 | 0.806956 | 6.39E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene75321 | 0.840026 | 1.11E-57 | -1.69E-46 |
| MS.gene053204 | MS.gene77022 | 0.827759 | 1.31E-54 | -1.69E-46 |
| MS.gene053204 | MS.gene80996 | 0.811198 | 7.89E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene82214 | 0.843072 | 1.75E-58 | -1.69E-46 |
| MS.gene053204 | MS.gene82256 | 0.801003 | 1.11E-48 | -1.69E-46 |
| MS.gene053204 | MS.gene82810 | 0.855464 | 6.20E-62 | -1.69E-46 |
| MS.gene053204 | MS.gene83582 | 0.801602 | 8.33E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene84726 | 0.804724 | 1.88E-49 | -1.69E-46 |
| MS.gene053204 | MS.gene84833 | 0.823556 | 1.30E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene86114 | 0.833346 | 5.62E-56 | -1.69E-46 |
| MS.gene053204 | MS.gene86236 | 0.823395 | 1.42E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene89326 | 0.80886 | 2.52E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene89630 | 0.821624 | 3.66E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene95539 | 0.821979 | 3.03E-53 | -1.69E-46 |
| MS.gene053204 | MS.gene95739 | 0.800564 | 1.36E-48 | -1.69E-46 |
| MS.gene053204 | MS.gene96503 | 0.807007 | 6.24E-50 | -1.69E-46 |
| MS.gene053204 | MS.gene98318 | 0.811844 | 5.71E-51 | -1.69E-46 |
| MS.gene053204 | MS.gene99375 | 0.815969 | 7.04E-52 | -1.69E-46 |
| MS.gene053204 | MS.gene99735 | 0.83188 | 1.30E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053204.t1 | MTR_4g007180 | 94.415 | 376 | 21 | 0 | 1 | 376 | 1 | 376 | 0.0 | 699 |
| MS.gene053204.t1 | MTR_2g105100 | 72.543 | 346 | 95 | 0 | 31 | 376 | 51 | 396 | 0.0 | 526 |
| MS.gene053204.t1 | MTR_5g009640 | 65.217 | 207 | 53 | 1 | 170 | 376 | 168 | 355 | 1.37e-88 | 271 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053204.t1 | AT1G62640 | 65.722 | 388 | 113 | 4 | 6 | 375 | 18 | 403 | 0.0 | 520 |
| MS.gene053204.t1 | AT1G62640 | 65.722 | 388 | 113 | 4 | 6 | 375 | 18 | 403 | 0.0 | 520 |
Find 76 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTAAACGTCGAGTTCTTTC+AGG | 0.225004 | 4.2:+92480967 | MS.gene053204:CDS |
| CATGAATATGAATACTTCTT+TGG | 0.249673 | 4.2:-92482940 | None:intergenic |
| CCACTACATCAATAATTCTT+TGG | 0.266849 | 4.2:-92483251 | None:intergenic |
| ATTATTGCTGCTTCTGGCTT+TGG | 0.274041 | 4.2:+92483402 | MS.gene053204:CDS |
| TAATGCATCAGACTCAATTA+AGG | 0.282247 | 4.2:+92482900 | MS.gene053204:CDS |
| AGTGCTGACTCAATTGAATT+TGG | 0.291729 | 4.2:-92483012 | None:intergenic |
| AGTTAGAAGTGGAAAGATTA+AGG | 0.293816 | 4.2:+92483371 | MS.gene053204:CDS |
| GGACAAATTATTGCTGCTTC+TGG | 0.294045 | 4.2:+92483396 | MS.gene053204:CDS |
| GCTTTGGTGCTGGTCTTACT+TGG | 0.297418 | 4.2:+92483418 | MS.gene053204:CDS |
| TTTCAAAATGTTCTTGTAAT+CGG | 0.300523 | 4.2:+92482278 | MS.gene053204:CDS |
| GCATGTAGTGGATTTATCTT+TGG | 0.313034 | 4.2:+92482135 | MS.gene053204:CDS |
| TATCAGCTGCTAGTCACATT+AGG | 0.325626 | 4.2:+92482163 | MS.gene053204:CDS |
| ATCAGCTGCTAGTCACATTA+GGG | 0.332459 | 4.2:+92482164 | MS.gene053204:CDS |
| ATATCAAATGTGGCTGATTA+TGG | 0.349357 | 4.2:+92483306 | MS.gene053204:CDS |
| AGAAGTTCATGTATTCTGTT+TGG | 0.357805 | 4.2:+92482338 | MS.gene053204:CDS |
| AGGAAATGGAAGGTGATAAG+AGG | 0.375453 | 4.2:-92479777 | None:intergenic |
| GCTGCTTCTGGCTTTGGTGC+TGG | 0.385323 | 4.2:+92483408 | MS.gene053204:CDS |
| GGAAGATGAAGGAGTGAAGT+TGG | 0.386428 | 4.2:-92479754 | None:intergenic |
| CTTTGGTGCTGGTCTTACTT+GGG | 0.392366 | 4.2:+92483419 | MS.gene053204:CDS |
| GCAAAGGAGGTTGGGAATCA+TGG | 0.411841 | 4.2:-92479828 | None:intergenic |
| TGATTGGTTACTTCTCCATC+AGG | 0.428078 | 4.2:+92483065 | MS.gene053204:CDS |
| TACCTGCATCCAGCATTGAT+TGG | 0.433675 | 4.2:+92483049 | MS.gene053204:CDS |
| CTCTTTCGAGATATATCGAT+TGG | 0.434773 | 4.2:+92482309 | MS.gene053204:CDS |
| ATACCTTGGCAAAGGAGGTT+GGG | 0.472067 | 4.2:-92479836 | None:intergenic |
| GAATATGAATACTTCTTTGG+AGG | 0.473078 | 4.2:-92482937 | None:intergenic |
| AATTGAGTCAGCACTTCAAA+AGG | 0.479873 | 4.2:+92483020 | MS.gene053204:CDS |
| TAGTTGATACTTCTGATGAA+TGG | 0.482232 | 4.2:+92480923 | MS.gene053204:CDS |
| TGCTGCCTCTACTGATAAAG+TGG | 0.490848 | 4.2:-92481717 | None:intergenic |
| AATGCATCAGACTCAATTAA+GGG | 0.492850 | 4.2:+92482901 | MS.gene053204:CDS |
| GTGATAAGAGGGGAAGATGA+AGG | 0.493811 | 4.2:-92479765 | None:intergenic |
| GCTGTAATGTTATAAGCTGC+TGG | 0.494699 | 4.2:-92482111 | None:intergenic |
| TAGATGAACACACCAAGATT+AGG | 0.495759 | 4.2:-92481784 | None:intergenic |
| AGAAGTGGAAAGATTAAGGA+AGG | 0.501824 | 4.2:+92483375 | MS.gene053204:CDS |
| CCAAAGAATTATTGATGTAG+TGG | 0.502244 | 4.2:+92483251 | MS.gene053204:CDS |
| TTTCAGATTTCAAAACAGCT+TGG | 0.504851 | 4.2:+92482075 | MS.gene053204:intron |
| CATACCTTGGCAAAGGAGGT+TGG | 0.506757 | 4.2:-92479837 | None:intergenic |
| AATGCAGCATATAAAGAAGA+AGG | 0.507598 | 4.2:+92482871 | MS.gene053204:CDS |
| TTTGGTGCTGGTCTTACTTG+GGG | 0.514017 | 4.2:+92483420 | MS.gene053204:CDS |
| GGAAATGGAAGGTGATAAGA+GGG | 0.514373 | 4.2:-92479776 | None:intergenic |
| AACCAATCAATGCTGGATGC+AGG | 0.515256 | 4.2:-92483051 | None:intergenic |
| AGACTCAATTAAGGGTGAGT+TGG | 0.516652 | 4.2:+92482909 | MS.gene053204:CDS |
| GAGAAGTAACCAATCAATGC+TGG | 0.517393 | 4.2:-92483058 | None:intergenic |
| TATTCATGCATACATATGAA+TGG | 0.524043 | 4.2:+92482955 | MS.gene053204:CDS |
| AAGTGCAGCTTCCATTCCAT+TGG | 0.525636 | 4.2:+92483335 | MS.gene053204:CDS |
| GGCTGCAAGCTGGTAGGATG+TGG | 0.526765 | 4.2:+92480853 | MS.gene053204:CDS |
| CTTTGCAGACTTGTTAGTCA+AGG | 0.528713 | 4.2:+92480832 | MS.gene053204:intron |
| AACTCGACGTTTACGAATCC+CGG | 0.530634 | 4.2:-92480959 | None:intergenic |
| TGCTGGTGCTATTCTAGTAC+AGG | 0.531902 | 4.2:+92482367 | MS.gene053204:CDS |
| AACATTACAGCTGCATGTAG+TGG | 0.532984 | 4.2:+92482123 | MS.gene053204:CDS |
| ATTCTGTTTGGAGATGCTGC+TGG | 0.537982 | 4.2:+92482350 | MS.gene053204:CDS |
| GAGATGGCAAAGGTTGATCC+AGG | 0.538042 | 4.2:+92481752 | MS.gene053204:CDS |
| TCATTAGTAATCTCAAGAGT+TGG | 0.547090 | 4.2:-92480886 | None:intergenic |
| GAGTCAGCACTTCAAAAGGC+TGG | 0.548884 | 4.2:+92483024 | MS.gene053204:CDS |
| TTAGATGAATCAGTTAGAAG+TGG | 0.549460 | 4.2:+92483360 | MS.gene053204:CDS |
| ACTGATTCATCTAAAGCCAA+TGG | 0.554412 | 4.2:-92483351 | None:intergenic |
| TTCATCTAAAGCCAATGGAA+TGG | 0.563272 | 4.2:-92483346 | None:intergenic |
| CTTGACCACTTTATCAGTAG+AGG | 0.564880 | 4.2:+92481712 | MS.gene053204:CDS |
| AATGGATAAGTGTTCGCACC+GGG | 0.577062 | 4.2:+92480941 | MS.gene053204:CDS |
| AGGTGATGTTGACCTAATCT+TGG | 0.581165 | 4.2:+92481772 | MS.gene053204:CDS |
| GAATGGATAAGTGTTCGCAC+CGG | 0.581811 | 4.2:+92480940 | MS.gene053204:CDS |
| AAGACATACCTTGGCAAAGG+AGG | 0.582045 | 4.2:-92479841 | None:intergenic |
| ATGCAGCATATAAAGAAGAA+GGG | 0.586575 | 4.2:+92482872 | MS.gene053204:CDS |
| CTTTATCAGTAGAGGCAGCA+AGG | 0.593587 | 4.2:+92481720 | MS.gene053204:CDS |
| TGTTAGTCAAGGCTGCAAGC+TGG | 0.594953 | 4.2:+92480843 | MS.gene053204:CDS |
| TCTAAGACATACCTTGGCAA+AGG | 0.596664 | 4.2:-92479844 | None:intergenic |
| AGTCAAGGCTGCAAGCTGGT+AGG | 0.597236 | 4.2:+92480847 | MS.gene053204:CDS |
| AAGATTAGGTCAACATCACC+TGG | 0.602574 | 4.2:-92481770 | None:intergenic |
| TGCAGCATATAAAGAAGAAG+GGG | 0.606045 | 4.2:+92482873 | MS.gene053204:CDS |
| ATTCCCAACCTCCTTTGCCA+AGG | 0.606866 | 4.2:+92479833 | MS.gene053204:CDS |
| CAGAATACATGAACTTCTGT+CGG | 0.609245 | 4.2:-92482333 | None:intergenic |
| AGCAAGGAAAGCTCTTGAGA+TGG | 0.614431 | 4.2:+92481736 | MS.gene053204:CDS |
| GATTTGAATAGTGATGGTGA+TGG | 0.616422 | 4.2:+92482615 | MS.gene053204:CDS |
| TCAGCTGCTAGTCACATTAG+GGG | 0.630404 | 4.2:+92482165 | MS.gene053204:CDS |
| GAAAGCTCTTGAGATGGCAA+AGG | 0.633878 | 4.2:+92481742 | MS.gene053204:CDS |
| GAAATGGAAGGTGATAAGAG+GGG | 0.692819 | 4.2:-92479775 | None:intergenic |
| ATTGCAGGCGTGCAACTACG+AGG | 0.723991 | 4.2:+92482572 | MS.gene053204:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAGTAATATATTTGATT+AGG | + | chr4.2:92483166-92483185 | MS.gene053204:intron | 10.0% |
| !! | TAATCAAATATATTACTATA+TGG | - | chr4.2:92483167-92483186 | None:intergenic | 10.0% |
| !! | TATAGTAATATATTTGATTA+GGG | + | chr4.2:92483167-92483186 | MS.gene053204:intron | 10.0% |
| !! | TATATTGATAAAAGATTAAT+AGG | + | chr4.2:92480292-92480311 | MS.gene053204:intron | 10.0% |
| !!! | AATTTAGAGAAATTTATTTT+TGG | - | chr4.2:92483097-92483116 | None:intergenic | 10.0% |
| !!! | CTTTTTACTTATATAAAAAT+TGG | - | chr4.2:92481893-92481912 | None:intergenic | 10.0% |
| !!! | TTAATCATAAAAAAAAGTTT+TGG | - | chr4.2:92483127-92483146 | None:intergenic | 10.0% |
| !! | AAGAAAAAAAAAATGTAGTT+TGG | - | chr4.2:92481303-92481322 | None:intergenic | 15.0% |
| !! | ACAAATTATTTACAACATTT+AGG | - | chr4.2:92482233-92482252 | None:intergenic | 15.0% |
| !!! | ATTATTTGTTATAAGATGTA+AGG | - | chr4.2:92480051-92480070 | None:intergenic | 15.0% |
| !!! | TAATAGTTCAATTTAGTTTT+CGG | + | chr4.2:92481445-92481464 | MS.gene053204:intron | 15.0% |
| !!! | TATTTTCATTGAGATTTAAA+TGG | + | chr4.2:92482498-92482517 | MS.gene053204:intron | 15.0% |
| !! | AAATTAAAATCAAACCATGA+TGG | + | chr4.2:92480705-92480724 | MS.gene053204:intron | 20.0% |
| !! | ATATATTTGATTAGGGAAAA+AGG | + | chr4.2:92483174-92483193 | MS.gene053204:intron | 20.0% |
| !! | CTATTCATTATAAACAAATG+TGG | + | chr4.2:92480432-92480451 | MS.gene053204:intron | 20.0% |
| !! | TAAATACTGAATTATTAGCA+TGG | - | chr4.2:92483209-92483228 | None:intergenic | 20.0% |
| !! | TATACAAATTATAACCATCA+TGG | - | chr4.2:92480722-92480741 | None:intergenic | 20.0% |
| !! | TATATATCCAATGTCTTATA+AGG | + | chr4.2:92481558-92481577 | MS.gene053204:intron | 20.0% |
| !! | TTTCAAAATGTTCTTGTAAT+CGG | + | chr4.2:92482278-92482297 | MS.gene053204:CDS | 20.0% |
| !!! | AAATTGTTTTGAGATATTGT+TGG | + | chr4.2:92481115-92481134 | MS.gene053204:intron | 20.0% |
| !!! | AAGTAAAAAGTACATATATC+TGG | + | chr4.2:92481903-92481922 | MS.gene053204:intron | 20.0% |
| !!! | AATAGTTCAATTTAGTTTTC+GGG | + | chr4.2:92481446-92481465 | MS.gene053204:intron | 20.0% |
| !!! | AGTTACTTTTTGTTGAATTA+AGG | + | chr4.2:92482196-92482215 | MS.gene053204:intron | 20.0% |
| !!! | ATCAGTTGATAATATAAGTT+TGG | - | chr4.2:92481360-92481379 | None:intergenic | 20.0% |
| !!! | ATTCACATTTTCATCTAATA+TGG | - | chr4.2:92481511-92481530 | None:intergenic | 20.0% |
| !!! | ATTCTGTTTTCAATTATTGA+TGG | + | chr4.2:92481145-92481164 | MS.gene053204:intron | 20.0% |
| !!! | ATTTACTTGTTGATAAATGT+AGG | + | chr4.2:92483224-92483243 | MS.gene053204:intron | 20.0% |
| !!! | GGTTTTTTATATAAGCAAAA+AGG | - | chr4.2:92481938-92481957 | None:intergenic | 20.0% |
| !!! | TTCACATTTTCATCTAATAT+GGG | - | chr4.2:92481510-92481529 | None:intergenic | 20.0% |
| !!! | TTCATTTTATATCATACACT+AGG | + | chr4.2:92479896-92479915 | MS.gene053204:intron | 20.0% |
| !!! | TTCTGTTTTCAATTATTGAT+GGG | + | chr4.2:92481146-92481165 | MS.gene053204:intron | 20.0% |
| !!! | TTTTGCTTATATAAAAAACC+AGG | + | chr4.2:92481938-92481957 | MS.gene053204:intron | 20.0% |
| ! | AAATTGAACCAAATCGTTAA+TGG | + | chr4.2:92481244-92481263 | MS.gene053204:intron | 25.0% |
| ! | AATGTAATCACATATATCAC+CGG | - | chr4.2:92482697-92482716 | None:intergenic | 25.0% |
| ! | ACTTTACTATGAGTCTTTAT+GGG | - | chr4.2:92480267-92480286 | None:intergenic | 25.0% |
| ! | AGAAAAAGTGATATCAAATG+TGG | + | chr4.2:92483296-92483315 | MS.gene053204:CDS | 25.0% |
| ! | ATCCTCATTATTACACTAAT+AGG | - | chr4.2:92481172-92481191 | None:intergenic | 25.0% |
| ! | CAATTTCTTCTACATACTTA+TGG | - | chr4.2:92481101-92481120 | None:intergenic | 25.0% |
| ! | CATGAATATGAATACTTCTT+TGG | - | chr4.2:92482943-92482962 | None:intergenic | 25.0% |
| ! | CGTAAACATCATAAATAGAA+TGG | + | chr4.2:92481012-92481031 | MS.gene053204:intron | 25.0% |
| ! | GTGTAATAAAAAAATTGCAC+AGG | - | chr4.2:92480629-92480648 | None:intergenic | 25.0% |
| ! | GTTATATATGTTTACATTGC+AGG | + | chr4.2:92482557-92482576 | MS.gene053204:intron | 25.0% |
| ! | GTTTAGTTATCAACTAACTA+TGG | + | chr4.2:92480394-92480413 | MS.gene053204:intron | 25.0% |
| ! | TAAAATATGGTTCCAAGTTA+TGG | - | chr4.2:92480789-92480808 | None:intergenic | 25.0% |
| ! | TAATAAAAAAATTGCACAGG+AGG | - | chr4.2:92480626-92480645 | None:intergenic | 25.0% |
| ! | TATGATGAAAACCATAAACA+TGG | - | chr4.2:92482441-92482460 | None:intergenic | 25.0% |
| ! | TATTCATGCATACATATGAA+TGG | + | chr4.2:92482955-92482974 | MS.gene053204:CDS | 25.0% |
| ! | TCTTACTCACATTTATTACT+AGG | - | chr4.2:92481484-92481503 | None:intergenic | 25.0% |
| !! | AAGATTAATAGGAAGTACAA+TGG | + | chr4.2:92480303-92480322 | MS.gene053204:intron | 25.0% |
| !! | GGTTTTCATCATAGTAAATA+GGG | + | chr4.2:92482448-92482467 | MS.gene053204:intron | 25.0% |
| !! | GTTTTCTCTAAATATAGTTC+TGG | - | chr4.2:92481281-92481300 | None:intergenic | 25.0% |
| !! | TGGTTTTCATCATAGTAAAT+AGG | + | chr4.2:92482447-92482466 | MS.gene053204:intron | 25.0% |
| !! | TTGATAACTGTTACAAATCA+TGG | + | chr4.2:92480174-92480193 | MS.gene053204:intron | 25.0% |
| !! | TTGATTTTGCTTGATGTTTA+TGG | + | chr4.2:92481673-92481692 | MS.gene053204:intron | 25.0% |
| !! | TTTGTTCATTTTATGAATGC+AGG | + | chr4.2:92482248-92482267 | MS.gene053204:intron | 25.0% |
| !!! | ACATTTGATATCACTTTTTC+TGG | - | chr4.2:92483297-92483316 | None:intergenic | 25.0% |
| !!! | AGTTTTGATTTGAATAGTGA+TGG | + | chr4.2:92482609-92482628 | MS.gene053204:CDS | 25.0% |
| !!! | CACTAGGTTTTAATAAGTTA+TGG | + | chr4.2:92479912-92479931 | MS.gene053204:intron | 25.0% |
| !!! | CTATATGGTATATCACTTTT+AGG | - | chr4.2:92483152-92483171 | None:intergenic | 25.0% |
| !!! | CTGTAACAAACTCTAAAATA+TGG | - | chr4.2:92480802-92480821 | None:intergenic | 25.0% |
| !!! | GTTAGTTGATAACTAAACTA+TGG | - | chr4.2:92480392-92480411 | None:intergenic | 25.0% |
| !!! | TGAATTGAATTTGGCTTTTA+TGG | + | chr4.2:92481042-92481061 | MS.gene053204:intron | 25.0% |
| !!! | TTAAATTTTGATGATCGCAA+TGG | + | chr4.2:92480573-92480592 | MS.gene053204:intron | 25.0% |
| AAATCAAGTCAAACCTTGTT+AGG | - | chr4.2:92481660-92481679 | None:intergenic | 30.0% | |
| AATCAAGTCAAACCTTGTTA+GGG | - | chr4.2:92481659-92481678 | None:intergenic | 30.0% | |
| AATGAGGATTGTTCATGATT+CGG | + | chr4.2:92481183-92481202 | MS.gene053204:intron | 30.0% | |
| AATGCAGCATATAAAGAAGA+AGG | + | chr4.2:92482871-92482890 | MS.gene053204:CDS | 30.0% | |
| AATGCATCAGACTCAATTAA+GGG | + | chr4.2:92482901-92482920 | MS.gene053204:CDS | 30.0% | |
| AGAAGTTCATGTATTCTGTT+TGG | + | chr4.2:92482338-92482357 | MS.gene053204:CDS | 30.0% | |
| AGTTAGAAGTGGAAAGATTA+AGG | + | chr4.2:92483371-92483390 | MS.gene053204:CDS | 30.0% | |
| ATATCAAATGTGGCTGATTA+TGG | + | chr4.2:92483306-92483325 | MS.gene053204:CDS | 30.0% | |
| ATCATTATGACCTTTATCTC+TGG | - | chr4.2:92480204-92480223 | None:intergenic | 30.0% | |
| ATGCAGCATATAAAGAAGAA+GGG | + | chr4.2:92482872-92482891 | MS.gene053204:CDS | 30.0% | |
| ATTTAACATAATAGTCGCCT+TGG | - | chr4.2:92480559-92480578 | None:intergenic | 30.0% | |
| ATTTGATTAGGGAAAAAGGT+TGG | + | chr4.2:92483178-92483197 | MS.gene053204:intron | 30.0% | |
| CAATGGTGAGAGTTATTTAT+AGG | + | chr4.2:92480320-92480339 | MS.gene053204:intron | 30.0% | |
| CACTTTACTATGAGTCTTTA+TGG | - | chr4.2:92480268-92480287 | None:intergenic | 30.0% | |
| CATGTAAATGAAATTGTGGT+TGG | + | chr4.2:92480461-92480480 | MS.gene053204:intron | 30.0% | |
| CCAAAGAATTATTGATGTAG+TGG | + | chr4.2:92483251-92483270 | MS.gene053204:CDS | 30.0% | |
| CCACTACATCAATAATTCTT+TGG | - | chr4.2:92483254-92483273 | None:intergenic | 30.0% | |
| CCTCAAAAACCTTAATATTG+AGG | + | chr4.2:92480500-92480519 | MS.gene053204:intron | 30.0% | |
| CTGAAATGATTCTATGTGAA+CGG | + | chr4.2:92481327-92481346 | MS.gene053204:intron | 30.0% | |
| GAATATGAATACTTCTTTGG+AGG | - | chr4.2:92482940-92482959 | None:intergenic | 30.0% | |
| GATGCATGTAAATGAAATTG+TGG | + | chr4.2:92480457-92480476 | MS.gene053204:intron | 30.0% | |
| TAATGCATCAGACTCAATTA+AGG | + | chr4.2:92482900-92482919 | MS.gene053204:CDS | 30.0% | |
| TCATTAGTAATCTCAAGAGT+TGG | - | chr4.2:92480889-92480908 | None:intergenic | 30.0% | |
| TCATTATGACCTTTATCTCT+GGG | - | chr4.2:92480203-92480222 | None:intergenic | 30.0% | |
| TCTACATACTTATGGAAACA+TGG | - | chr4.2:92481093-92481112 | None:intergenic | 30.0% | |
| TGTTATAAGATGTAAGGTGT+GGG | - | chr4.2:92480045-92480064 | None:intergenic | 30.0% | |
| TTAGATGAATCAGTTAGAAG+TGG | + | chr4.2:92483360-92483379 | MS.gene053204:CDS | 30.0% | |
| TTGTTATAAGATGTAAGGTG+TGG | - | chr4.2:92480046-92480065 | None:intergenic | 30.0% | |
| TTTCAGATTTCAAAACAGCT+TGG | + | chr4.2:92482075-92482094 | MS.gene053204:intron | 30.0% | |
| ! | ACTAAAGCAAACAAGTTTTG+AGG | - | chr4.2:92479800-92479819 | None:intergenic | 30.0% |
| ! | ATATAAGCAAAAAGGTGCAT+TGG | - | chr4.2:92481930-92481949 | None:intergenic | 30.0% |
| ! | CCTCAATATTAAGGTTTTTG+AGG | - | chr4.2:92480503-92480522 | None:intergenic | 30.0% |
| ! | CTAAACTATGGTTAGTTGAT+AGG | - | chr4.2:92480380-92480399 | None:intergenic | 30.0% |
| ! | GTATCGACATTTCTAATCAA+AGG | + | chr4.2:92482666-92482685 | MS.gene053204:intron | 30.0% |
| ! | TAAGGTTTCAGGTAAAAATG+TGG | + | chr4.2:92481576-92481595 | MS.gene053204:intron | 30.0% |
| ! | TAGTTGATACTTCTGATGAA+TGG | + | chr4.2:92480923-92480942 | MS.gene053204:CDS | 30.0% |
| ! | TCTACTTCAGATGATCTTTT+TGG | + | chr4.2:92481803-92481822 | MS.gene053204:CDS | 30.0% |
| !! | AGAAATTCTAAGACATACCT+TGG | - | chr4.2:92479853-92479872 | None:intergenic | 30.0% |
| !! | CTAAATATAGTTCTGGTTCA+GGG | - | chr4.2:92481274-92481293 | None:intergenic | 30.0% |
| !! | TCTAAATATAGTTCTGGTTC+AGG | - | chr4.2:92481275-92481294 | None:intergenic | 30.0% |
| !!! | TTGATATCACTTTTTCTGGA+GGG | - | chr4.2:92483293-92483312 | None:intergenic | 30.0% |
| !!! | TTTGATATCACTTTTTCTGG+AGG | - | chr4.2:92483294-92483313 | None:intergenic | 30.0% |
| AAAAAAATTGCACAGGAGGA+AGG | - | chr4.2:92480622-92480641 | None:intergenic | 35.0% | |
| AATTGAGTCAGCACTTCAAA+AGG | + | chr4.2:92483020-92483039 | MS.gene053204:CDS | 35.0% | |
| ACACCAAAGAATCATAACAC+TGG | - | chr4.2:92481621-92481640 | None:intergenic | 35.0% | |
| ACCAAACCATTGTAACAGTT+CGG | - | chr4.2:92481223-92481242 | None:intergenic | 35.0% | |
| ACCAAAGAATCATAACACTG+GGG | - | chr4.2:92481619-92481638 | None:intergenic | 35.0% | |
| AGAAAACCGAACTGTTACAA+TGG | + | chr4.2:92481214-92481233 | MS.gene053204:intron | 35.0% | |
| AGAAGTGGAAAGATTAAGGA+AGG | + | chr4.2:92483375-92483394 | MS.gene053204:CDS | 35.0% | |
| AGTGCATAAGAGTCTTCATA+TGG | + | chr4.2:92480235-92480254 | MS.gene053204:intron | 35.0% | |
| CAAATGCGACCTCAATATTA+AGG | - | chr4.2:92480512-92480531 | None:intergenic | 35.0% | |
| CACCAAAGAATCATAACACT+GGG | - | chr4.2:92481620-92481639 | None:intergenic | 35.0% | |
| CAGAATACATGAACTTCTGT+CGG | - | chr4.2:92482336-92482355 | None:intergenic | 35.0% | |
| CCAATGTCTTATAAGGTTTC+AGG | + | chr4.2:92481565-92481584 | MS.gene053204:intron | 35.0% | |
| CCTGAAACCTTATAAGACAT+TGG | - | chr4.2:92481568-92481587 | None:intergenic | 35.0% | |
| CTATAACCAATACTAACCTG+AGG | - | chr4.2:92481836-92481855 | None:intergenic | 35.0% | |
| CTCTTTCGAGATATATCGAT+TGG | + | chr4.2:92482309-92482328 | MS.gene053204:CDS | 35.0% | |
| GAGATGAAAATTCGTCTCAT+AGG | - | chr4.2:92480116-92480135 | None:intergenic | 35.0% | |
| GGCCTATTAGTGTAATAATG+AGG | + | chr4.2:92481167-92481186 | MS.gene053204:intron | 35.0% | |
| GGCTAACTATACCATGTTTA+TGG | + | chr4.2:92482427-92482446 | MS.gene053204:intron | 35.0% | |
| GGTTACAGCTGAATTGAATT+TGG | + | chr4.2:92481033-92481052 | MS.gene053204:intron | 35.0% | |
| GTAAGAGTCCAAATTCAACA+AGG | - | chr4.2:92480758-92480777 | None:intergenic | 35.0% | |
| GTGCATAAGAGTCTTCATAT+GGG | + | chr4.2:92480236-92480255 | MS.gene053204:intron | 35.0% | |
| TAGAAATGTCGATACTGCAA+AGG | - | chr4.2:92482661-92482680 | None:intergenic | 35.0% | |
| TAGATGAACACACCAAGATT+AGG | - | chr4.2:92481787-92481806 | None:intergenic | 35.0% | |
| TGATAGAGAAAACTCATTCG+AGG | - | chr4.2:92480082-92480101 | None:intergenic | 35.0% | |
| TGCAGCATATAAAGAAGAAG+GGG | + | chr4.2:92482873-92482892 | MS.gene053204:CDS | 35.0% | |
| TTGATCAGTTCGTGAACTAT+CGG | + | chr4.2:92481386-92481405 | MS.gene053204:intron | 35.0% | |
| ! | AACAGTTCGGTTTTCTTTCT+TGG | - | chr4.2:92481210-92481229 | None:intergenic | 35.0% |
| ! | ACTGATTCATCTAAAGCCAA+TGG | - | chr4.2:92483354-92483373 | None:intergenic | 35.0% |
| ! | GATTTGAATAGTGATGGTGA+TGG | + | chr4.2:92482615-92482634 | MS.gene053204:CDS | 35.0% |
| ! | TTCATCTAAAGCCAATGGAA+TGG | - | chr4.2:92483349-92483368 | None:intergenic | 35.0% |
| ! | TTGACGACAATTTAAAGCCA+AGG | + | chr4.2:92480539-92480558 | MS.gene053204:intron | 35.0% |
| !! | AAGCACTGACACATATACAT+TGG | - | chr4.2:92482775-92482794 | None:intergenic | 35.0% |
| !! | ACTTTTGTTTGTCAACACTG+AGG | - | chr4.2:92482407-92482426 | None:intergenic | 35.0% |
| !! | AGTGCTGACTCAATTGAATT+TGG | - | chr4.2:92483015-92483034 | None:intergenic | 35.0% |
| !! | CTATGGTTAGTTGATAGGTT+AGG | - | chr4.2:92480375-92480394 | None:intergenic | 35.0% |
| !! | CTCAGGTTAGTATTGGTTAT+AGG | + | chr4.2:92481834-92481853 | MS.gene053204:intron | 35.0% |
| !! | GCATGTAGTGGATTTATCTT+TGG | + | chr4.2:92482135-92482154 | MS.gene053204:CDS | 35.0% |
| !! | GTGTGGGTTGATTACATATT+CGG | - | chr4.2:92480029-92480048 | None:intergenic | 35.0% |
| !! | TCAGTGTTGACAAACAAAAG+TGG | + | chr4.2:92482406-92482425 | MS.gene053204:intron | 35.0% |
| !!! | ACAAGTTTTGAGGAAATGGA+AGG | - | chr4.2:92479790-92479809 | None:intergenic | 35.0% |
| !!! | GCAAACAAGTTTTGAGGAAA+TGG | - | chr4.2:92479794-92479813 | None:intergenic | 35.0% |
| !!! | GGATCAGCTATTTTTCAATG+GGG | + | chr4.2:92483441-92483460 | MS.gene053204:CDS | 35.0% |
| !!! | GGGATCAGCTATTTTTCAAT+GGG | + | chr4.2:92483440-92483459 | MS.gene053204:CDS | 35.0% |
| !!! | TATTTTTGGTCCTTACCTGA+TGG | - | chr4.2:92483083-92483102 | None:intergenic | 35.0% |
| !!! | TGAATTTGGCTTTTATGGAG+TGG | + | chr4.2:92481047-92481066 | MS.gene053204:intron | 35.0% |
| AACATTACAGCTGCATGTAG+TGG | + | chr4.2:92482123-92482142 | MS.gene053204:CDS | 40.0% | |
| AAGATTAGGTCAACATCACC+TGG | - | chr4.2:92481773-92481792 | None:intergenic | 40.0% | |
| ACCATAGTTTCGCTTCATGT+AGG | + | chr4.2:92482842-92482861 | MS.gene053204:intron | 40.0% | |
| ACCGAACTGTTACAATGGTT+TGG | + | chr4.2:92481219-92481238 | MS.gene053204:intron | 40.0% | |
| AGACTCAATTAAGGGTGAGT+TGG | + | chr4.2:92482909-92482928 | MS.gene053204:CDS | 40.0% | |
| AGGAAATGGAAGGTGATAAG+AGG | - | chr4.2:92479780-92479799 | None:intergenic | 40.0% | |
| AGGTGATGTTGACCTAATCT+TGG | + | chr4.2:92481772-92481791 | MS.gene053204:CDS | 40.0% | |
| AGTTTCTCTCTTCCCTAACA+AGG | + | chr4.2:92481644-92481663 | MS.gene053204:intron | 40.0% | |
| AGTTTCTGCAATGTACTTCC+TGG | - | chr4.2:92481959-92481978 | None:intergenic | 40.0% | |
| ATCAGCTGCTAGTCACATTA+GGG | + | chr4.2:92482164-92482183 | MS.gene053204:CDS | 40.0% | |
| ATGTCGATACTGCAAAGGTA+AGG | - | chr4.2:92482656-92482675 | None:intergenic | 40.0% | |
| CAATCACAATCGTCATCACT+AGG | + | chr4.2:92479992-92480011 | MS.gene053204:intron | 40.0% | |
| CTTGACCACTTTATCAGTAG+AGG | + | chr4.2:92481712-92481731 | MS.gene053204:CDS | 40.0% | |
| GAAATGGAAGGTGATAAGAG+GGG | - | chr4.2:92479778-92479797 | None:intergenic | 40.0% | |
| GAGAAGTAACCAATCAATGC+TGG | - | chr4.2:92483061-92483080 | None:intergenic | 40.0% | |
| GCTGTAATGTTATAAGCTGC+TGG | - | chr4.2:92482114-92482133 | None:intergenic | 40.0% | |
| GGAAATGGAAGGTGATAAGA+GGG | - | chr4.2:92479779-92479798 | None:intergenic | 40.0% | |
| TATCAGCTGCTAGTCACATT+AGG | + | chr4.2:92482163-92482182 | MS.gene053204:CDS | 40.0% | |
| TCATGGAATCCCAGAGATAA+AGG | + | chr4.2:92480191-92480210 | MS.gene053204:intron | 40.0% | |
| TCCAAATTCAACAAGGATGC+AGG | - | chr4.2:92480751-92480770 | None:intergenic | 40.0% | |
| TCCTGCATCCTTGTTGAATT+TGG | + | chr4.2:92480747-92480766 | MS.gene053204:intron | 40.0% | |
| TGAACCAAATCGTTAATGGC+CGG | + | chr4.2:92481248-92481267 | MS.gene053204:intron | 40.0% | |
| TGCTTGATGTTTATGGTTGC+AGG | + | chr4.2:92481680-92481699 | MS.gene053204:intron | 40.0% | |
| TTACTCTCAGTGCCATAACT+TGG | + | chr4.2:92480774-92480793 | MS.gene053204:intron | 40.0% | |
| TTGATGTTTATGGTTGCAGG+TGG | + | chr4.2:92481683-92481702 | MS.gene053204:intron | 40.0% | |
| TTGTTTGTCAACACTGAGGA+AGG | - | chr4.2:92482403-92482422 | None:intergenic | 40.0% | |
| ! | GGACAAATTATTGCTGCTTC+TGG | + | chr4.2:92483396-92483415 | MS.gene053204:CDS | 40.0% |
| ! | TCTAAGACATACCTTGGCAA+AGG | - | chr4.2:92479847-92479866 | None:intergenic | 40.0% |
| ! | TGATTGGTTACTTCTCCATC+AGG | + | chr4.2:92483065-92483084 | MS.gene053204:CDS | 40.0% |
| ! | TTTCTAATCAAAGGCGTGTC+CGG | + | chr4.2:92482675-92482694 | MS.gene053204:intron | 40.0% |
| !! | AGTTGATAGGTTAGGTGGTT+AGG | - | chr4.2:92480367-92480386 | None:intergenic | 40.0% |
| !! | ATTATTGCTGCTTCTGGCTT+TGG | + | chr4.2:92483402-92483421 | MS.gene053204:CDS | 40.0% |
| !! | CTTTGCAGACTTGTTAGTCA+AGG | + | chr4.2:92480832-92480851 | MS.gene053204:intron | 40.0% |
| !! | TCAGATGATCTTTTTGGCAC+TGG | + | chr4.2:92481809-92481828 | MS.gene053204:CDS | 40.0% |
| !! | TGGTTAGTTGATAGGTTAGG+TGG | - | chr4.2:92480372-92480391 | None:intergenic | 40.0% |
| !!! | GGGGATCAGCTATTTTTCAA+TGG | + | chr4.2:92483439-92483458 | MS.gene053204:CDS | 40.0% |
| AACCAATCAATGCTGGATGC+AGG | - | chr4.2:92483054-92483073 | None:intergenic | 45.0% | |
| AACTCGACGTTTACGAATCC+CGG | - | chr4.2:92480962-92480981 | None:intergenic | 45.0% | |
| AAGACATACCTTGGCAAAGG+AGG | - | chr4.2:92479844-92479863 | None:intergenic | 45.0% | |
| AAGTGCAGCTTCCATTCCAT+TGG | + | chr4.2:92483335-92483354 | MS.gene053204:CDS | 45.0% | |
| AATGGATAAGTGTTCGCACC+GGG | + | chr4.2:92480941-92480960 | MS.gene053204:CDS | 45.0% | |
| ACTGGTCCTCAGGTTAGTAT+TGG | + | chr4.2:92481827-92481846 | MS.gene053204:intron | 45.0% | |
| AGCAAGGAAAGCTCTTGAGA+TGG | + | chr4.2:92481736-92481755 | MS.gene053204:CDS | 45.0% | |
| ATACCTTGGCAAAGGAGGTT+GGG | - | chr4.2:92479839-92479858 | None:intergenic | 45.0% | |
| ATTCTGTTTGGAGATGCTGC+TGG | + | chr4.2:92482350-92482369 | MS.gene053204:CDS | 45.0% | |
| CGTAAACGTCGAGTTCTTTC+AGG | + | chr4.2:92480967-92480986 | MS.gene053204:CDS | 45.0% | |
| CTTTATCAGTAGAGGCAGCA+AGG | + | chr4.2:92481720-92481739 | MS.gene053204:CDS | 45.0% | |
| GAAAGCTCTTGAGATGGCAA+AGG | + | chr4.2:92481742-92481761 | MS.gene053204:CDS | 45.0% | |
| GAATGGATAAGTGTTCGCAC+CGG | + | chr4.2:92480940-92480959 | MS.gene053204:CDS | 45.0% | |
| GCCCCAGTGTTATGATTCTT+TGG | + | chr4.2:92481615-92481634 | MS.gene053204:intron | 45.0% | |
| GCCTACATGAAGCGAAACTA+TGG | - | chr4.2:92482846-92482865 | None:intergenic | 45.0% | |
| GGAAGATGAAGGAGTGAAGT+TGG | - | chr4.2:92479757-92479776 | None:intergenic | 45.0% | |
| GGTTACTTCTCCATCAGGTA+AGG | + | chr4.2:92483070-92483089 | MS.gene053204:intron | 45.0% | |
| GTGATAAGAGGGGAAGATGA+AGG | - | chr4.2:92479768-92479787 | None:intergenic | 45.0% | |
| TCAGCTGCTAGTCACATTAG+GGG | + | chr4.2:92482165-92482184 | MS.gene053204:CDS | 45.0% | |
| TGCTGCCTCTACTGATAAAG+TGG | - | chr4.2:92481720-92481739 | None:intergenic | 45.0% | |
| TTCAGCTCTTTCGTGCGATT+TGG | + | chr4.2:92481415-92481434 | MS.gene053204:intron | 45.0% | |
| !! | ATATAGTTCTGGTTCAGGGC+CGG | - | chr4.2:92481270-92481289 | None:intergenic | 45.0% |
| !! | CTCTTTCGTGCGATTTGGTT+TGG | + | chr4.2:92481420-92481439 | MS.gene053204:intron | 45.0% |
| !! | CTTTGGTGCTGGTCTTACTT+GGG | + | chr4.2:92483419-92483438 | MS.gene053204:CDS | 45.0% |
| !! | TACCTGCATCCAGCATTGAT+TGG | + | chr4.2:92483049-92483068 | MS.gene053204:CDS | 45.0% |
| !! | TGCTGGTGCTATTCTAGTAC+AGG | + | chr4.2:92482367-92482386 | MS.gene053204:CDS | 45.0% |
| !! | TTTGGTGCTGGTCTTACTTG+GGG | + | chr4.2:92483420-92483439 | MS.gene053204:CDS | 45.0% |
| ATTCCCAACCTCCTTTGCCA+AGG | + | chr4.2:92479833-92479852 | MS.gene053204:CDS | 50.0% | |
| CATACCTTGGCAAAGGAGGT+TGG | - | chr4.2:92479840-92479859 | None:intergenic | 50.0% | |
| GAGTCAGCACTTCAAAAGGC+TGG | + | chr4.2:92483024-92483043 | MS.gene053204:CDS | 50.0% | |
| GCAAAGGAGGTTGGGAATCA+TGG | - | chr4.2:92479831-92479850 | None:intergenic | 50.0% | |
| TGTTAGTCAAGGCTGCAAGC+TGG | + | chr4.2:92480843-92480862 | MS.gene053204:CDS | 50.0% | |
| ! | GAGATGGCAAAGGTTGATCC+AGG | + | chr4.2:92481752-92481771 | MS.gene053204:CDS | 50.0% |
| !! | GCTTTGGTGCTGGTCTTACT+TGG | + | chr4.2:92483418-92483437 | MS.gene053204:CDS | 50.0% |
| !!! | TCTTTTTGGCACTGGTCCTC+AGG | + | chr4.2:92481817-92481836 | MS.gene053204:CDS | 50.0% |
| AGGGCCGGCCATTAACGATT+TGG | - | chr4.2:92481255-92481274 | None:intergenic | 55.0% | |
| AGTCAAGGCTGCAAGCTGGT+AGG | + | chr4.2:92480847-92480866 | MS.gene053204:CDS | 55.0% | |
| ATTGCAGGCGTGCAACTACG+AGG | + | chr4.2:92482572-92482591 | MS.gene053204:intron | 55.0% | |
| TTGCACAGGAGGAAGGCAAG+CGG | - | chr4.2:92480615-92480634 | None:intergenic | 55.0% | |
| GGCTGCAAGCTGGTAGGATG+TGG | + | chr4.2:92480853-92480872 | MS.gene053204:CDS | 60.0% | |
| TGCACAGGAGGAAGGCAAGC+GGG | - | chr4.2:92480614-92480633 | None:intergenic | 60.0% | |
| !! | GCTGCTTCTGGCTTTGGTGC+TGG | + | chr4.2:92483408-92483427 | MS.gene053204:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 92479745 | 92483467 | 92479745 | ID=MS.gene053204 |
| chr4.2 | mRNA | 92479745 | 92483467 | 92479745 | ID=MS.gene053204.t1;Parent=MS.gene053204 |
| chr4.2 | exon | 92479745 | 92479854 | 92479745 | ID=MS.gene053204.t1.exon1;Parent=MS.gene053204.t1 |
| chr4.2 | CDS | 92479745 | 92479854 | 92479745 | ID=cds.MS.gene053204.t1;Parent=MS.gene053204.t1 |
| chr4.2 | exon | 92480840 | 92480988 | 92480840 | ID=MS.gene053204.t1.exon2;Parent=MS.gene053204.t1 |
| chr4.2 | CDS | 92480840 | 92480988 | 92480840 | ID=cds.MS.gene053204.t1;Parent=MS.gene053204.t1 |
| chr4.2 | exon | 92481702 | 92481838 | 92481702 | ID=MS.gene053204.t1.exon3;Parent=MS.gene053204.t1 |
| chr4.2 | CDS | 92481702 | 92481838 | 92481702 | ID=cds.MS.gene053204.t1;Parent=MS.gene053204.t1 |
| chr4.2 | exon | 92482081 | 92482186 | 92482081 | ID=MS.gene053204.t1.exon4;Parent=MS.gene053204.t1 |
| chr4.2 | CDS | 92482081 | 92482186 | 92482081 | ID=cds.MS.gene053204.t1;Parent=MS.gene053204.t1 |
| chr4.2 | exon | 92482270 | 92482388 | 92482270 | ID=MS.gene053204.t1.exon5;Parent=MS.gene053204.t1 |
| chr4.2 | CDS | 92482270 | 92482388 | 92482270 | ID=cds.MS.gene053204.t1;Parent=MS.gene053204.t1 |
| chr4.2 | exon | 92482579 | 92482643 | 92482579 | ID=MS.gene053204.t1.exon6;Parent=MS.gene053204.t1 |
| chr4.2 | CDS | 92482579 | 92482643 | 92482579 | ID=cds.MS.gene053204.t1;Parent=MS.gene053204.t1 |
| chr4.2 | exon | 92482864 | 92483086 | 92482864 | ID=MS.gene053204.t1.exon7;Parent=MS.gene053204.t1 |
| chr4.2 | CDS | 92482864 | 92483086 | 92482864 | ID=cds.MS.gene053204.t1;Parent=MS.gene053204.t1 |
| chr4.2 | exon | 92483246 | 92483467 | 92483246 | ID=MS.gene053204.t1.exon8;Parent=MS.gene053204.t1 |
| chr4.2 | CDS | 92483246 | 92483467 | 92483246 | ID=cds.MS.gene053204.t1;Parent=MS.gene053204.t1 |
| Gene Sequence |
| Protein sequence |
