Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066269.t1 | XP_003592185.2 | 96.7 | 336 | 11 | 0 | 1 | 336 | 61 | 396 | 1.20E-176 | 629 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066269.t1 | Q9FLY0 | 63.2 | 323 | 117 | 1 | 11 | 333 | 1 | 321 | 3.4e-114 | 412.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066269.t1 | B7FJU0 | 96.7 | 336 | 11 | 0 | 1 | 336 | 1 | 336 | 9.0e-177 | 629.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene066269 | 0.851271 | 9.90E-61 | -1.69E-46 |
| MS.gene049669 | MS.gene066269 | 0.804173 | 2.45E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene066269 | 0.804046 | 2.61E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene066269 | 0.828571 | 8.35E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene066269 | 0.820626 | 6.21E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene066269 | 0.80862 | 2.83E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene066269 | 0.828244 | 1.00E-54 | -1.69E-46 |
| MS.gene050820 | MS.gene066269 | 0.807931 | 3.97E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene066269 | 0.842213 | 2.97E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene066269 | 0.81541 | 9.38E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene066269 | 0.803384 | 3.58E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene066269 | 0.859043 | 5.43E-63 | -1.69E-46 |
| MS.gene052302 | MS.gene066269 | 0.836552 | 8.75E-57 | -1.69E-46 |
| MS.gene052309 | MS.gene066269 | -0.835286 | 1.83E-56 | -1.69E-46 |
| MS.gene052376 | MS.gene066269 | 0.847122 | 1.41E-59 | -1.69E-46 |
| MS.gene052389 | MS.gene066269 | 0.83806 | 3.60E-57 | -1.69E-46 |
| MS.gene052586 | MS.gene066269 | 0.807034 | 6.15E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene066269 | 0.827277 | 1.71E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene066269 | 0.83206 | 1.17E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene066269 | 0.855586 | 5.71E-62 | -1.69E-46 |
| MS.gene054983 | MS.gene066269 | 0.814001 | 1.92E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene066269 | 0.822559 | 2.22E-53 | -1.69E-46 |
| MS.gene056087 | MS.gene066269 | 0.819119 | 1.37E-52 | -1.69E-46 |
| MS.gene05761 | MS.gene066269 | 0.809734 | 1.63E-50 | -1.69E-46 |
| MS.gene057967 | MS.gene066269 | 0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene059899 | MS.gene066269 | 0.80378 | 2.96E-49 | -1.69E-46 |
| MS.gene060879 | MS.gene066269 | 0.835399 | 1.72E-56 | -1.69E-46 |
| MS.gene061040 | MS.gene066269 | -0.839357 | 1.66E-57 | -1.69E-46 |
| MS.gene061114 | MS.gene066269 | -0.81601 | 6.89E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066269.t1 | MTR_1g099620 | 96.726 | 336 | 11 | 0 | 1 | 336 | 1 | 336 | 0.0 | 669 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066269.t1 | AT5G52810 | 63.158 | 323 | 117 | 1 | 11 | 333 | 1 | 321 | 7.56e-143 | 407 |
Find 88 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGAACCTCTTGTGTTTC+TGG | 0.038368 | 1.1:-71767956 | MS.gene066269:CDS |
| TTGGATGAGGTTGTTGGATT+TGG | 0.201511 | 1.1:-71767707 | MS.gene066269:CDS |
| TGGATGAGGTTGTTGGATTT+GGG | 0.215659 | 1.1:-71767706 | MS.gene066269:CDS |
| GCAGAAAGGTTGAAACTTTA+GGG | 0.248099 | 1.1:+71768203 | None:intergenic |
| GTGATCAAGGAAGATGAAAT+TGG | 0.263380 | 1.1:-71767476 | MS.gene066269:CDS |
| TGCAGAAAGGTTGAAACTTT+AGG | 0.282765 | 1.1:+71768202 | None:intergenic |
| CTCTCCTCCTCATGCCATCT+TGG | 0.286730 | 1.1:-71768138 | MS.gene066269:CDS |
| GATTGTAGTGTTGGCGAATT+GGG | 0.290280 | 1.1:+71768176 | None:intergenic |
| TGGTCAAACCCTAGCTTCTA+TGG | 0.293021 | 1.1:-71767999 | MS.gene066269:CDS |
| GTTGAAGGTTGGAGCTCATT+TGG | 0.304474 | 1.1:-71767630 | MS.gene066269:CDS |
| AGTTGGGAGAAGCAGTTTAG+AGG | 0.305193 | 1.1:-71767420 | MS.gene066269:CDS |
| GGTTGAAACTTTAGGGAGAT+TGG | 0.308036 | 1.1:+71768210 | None:intergenic |
| CTTATTAGAGGTGATAAAGT+TGG | 0.314713 | 1.1:-71767437 | MS.gene066269:CDS |
| AACCTCTTGTGTTTCTGGTT+TGG | 0.324737 | 1.1:-71767951 | MS.gene066269:CDS |
| ATTCTTGTTATGGTTGGTGC+TGG | 0.330095 | 1.1:-71767896 | MS.gene066269:CDS |
| AAACACAAGAGGTTCTATAA+AGG | 0.342979 | 1.1:+71767960 | None:intergenic |
| GGATAGTGATATTCTTGTTA+TGG | 0.347483 | 1.1:-71767906 | MS.gene066269:CDS |
| AGATTGTAGTGTTGGCGAAT+TGG | 0.347884 | 1.1:+71768175 | None:intergenic |
| GGATTGGATGTGATTGATTA+GGG | 0.349889 | 1.1:+71768231 | None:intergenic |
| TATGGTTGGTGCTGGGGCTC+TGG | 0.359468 | 1.1:-71767888 | MS.gene066269:CDS |
| CAAGGTTATTTCATCTTTGT+TGG | 0.364089 | 1.1:+71768312 | None:intergenic |
| TGGATTGGATGTGATTGATT+AGG | 0.366687 | 1.1:+71768230 | None:intergenic |
| TTCTTGTTATGGTTGGTGCT+GGG | 0.368256 | 1.1:-71767895 | MS.gene066269:CDS |
| GGTTGGAGCTCATTTGGATT+TGG | 0.375125 | 1.1:-71767624 | MS.gene066269:CDS |
| AACTTGTTGGAGCTTATTAG+AGG | 0.376708 | 1.1:-71767449 | MS.gene066269:CDS |
| TGTGATTGATTAGGGTTTGA+TGG | 0.384399 | 1.1:+71768239 | None:intergenic |
| GGGAATTTGGATGAGGTTGT+TGG | 0.406725 | 1.1:-71767713 | MS.gene066269:CDS |
| TGATCAAGGAAGATGAAATT+GGG | 0.408514 | 1.1:-71767475 | MS.gene066269:CDS |
| TTCTGCTGTTGTTGATATGC+TGG | 0.412608 | 1.1:-71767372 | MS.gene066269:CDS |
| AAAATGAGCTTTAATCAAAT+GGG | 0.414889 | 1.1:+71767862 | None:intergenic |
| TGTGAGCTGTGCTACTAATT+CGG | 0.423913 | 1.1:-71767678 | MS.gene066269:CDS |
| GTTGAAGCAGGGGAGCTTGT+GGG | 0.429786 | 1.1:-71767515 | MS.gene066269:CDS |
| TAGGGTTTGATGGGTGAGGA+TGG | 0.429813 | 1.1:+71768249 | None:intergenic |
| TTATTAGAGGTGATAAAGTT+GGG | 0.439432 | 1.1:-71767436 | MS.gene066269:CDS |
| GGAGCTCATTTGGATTTGGT+TGG | 0.440193 | 1.1:-71767620 | MS.gene066269:CDS |
| AACACAAGAGGTTCTATAAA+GGG | 0.442179 | 1.1:+71767961 | None:intergenic |
| AAACTTTAGGGAGATTGGAT+TGG | 0.446377 | 1.1:+71768215 | None:intergenic |
| AAGGAGAGAGATTGTAGTGT+TGG | 0.449638 | 1.1:+71768167 | None:intergenic |
| CAGAATTTACCAGGTGTTCA+AGG | 0.463641 | 1.1:-71768049 | MS.gene066269:CDS |
| CGATGATGAGGCTTTGAAAA+GGG | 0.466108 | 1.1:-71767570 | MS.gene066269:CDS |
| ACCCCTTCTTTCCCTTACAT+TGG | 0.466323 | 1.1:-71768109 | MS.gene066269:CDS |
| GCGAATTGGGGTTTGCAGAA+AGG | 0.466530 | 1.1:+71768189 | None:intergenic |
| GGATGAGGTTGTTGGATTTG+GGG | 0.471029 | 1.1:-71767705 | MS.gene066269:CDS |
| TGATTAGGGTTTGATGGGTG+AGG | 0.472118 | 1.1:+71768245 | None:intergenic |
| GGGTTGTGGGAATTTGGATG+AGG | 0.472644 | 1.1:-71767720 | MS.gene066269:CDS |
| TGTTGACAATGAGGCTGCAT+TGG | 0.473667 | 1.1:-71767537 | MS.gene066269:CDS |
| AGTGATATTCTTGTTATGGT+TGG | 0.474534 | 1.1:-71767902 | MS.gene066269:CDS |
| TTGGAATAGGACAGTTGAAA+AGG | 0.474625 | 1.1:-71767807 | MS.gene066269:CDS |
| AGTTGAAAAGGCGAAAACTT+TGG | 0.477139 | 1.1:-71767795 | MS.gene066269:CDS |
| GCGATGATGAGGCTTTGAAA+AGG | 0.487737 | 1.1:-71767571 | MS.gene066269:CDS |
| GAGGCTGCATTGGTTGAAGC+AGG | 0.488309 | 1.1:-71767527 | MS.gene066269:CDS |
| ACGCCAATGTAAGGGAAAGA+AGG | 0.489748 | 1.1:+71768106 | None:intergenic |
| CAGTGGAATCCATAGAAGCT+AGG | 0.498004 | 1.1:+71767990 | None:intergenic |
| TCTTGTTATGGTTGGTGCTG+GGG | 0.498913 | 1.1:-71767894 | MS.gene066269:CDS |
| CGCCAATGTAAGGGAAAGAA+GGG | 0.501170 | 1.1:+71768107 | None:intergenic |
| GGTTGAAGCAGGGGAGCTTG+TGG | 0.506759 | 1.1:-71767516 | MS.gene066269:CDS |
| GTGATTGATTAGGGTTTGAT+GGG | 0.510607 | 1.1:+71768240 | None:intergenic |
| ATGAGGAGGAGAGAAGAAGA+AGG | 0.525500 | 1.1:+71768148 | None:intergenic |
| GGTTATTTCATCTTTGTTGG+TGG | 0.525572 | 1.1:+71768315 | None:intergenic |
| TTCGGAGACAGCGCTTGTGA+AGG | 0.531883 | 1.1:-71767660 | MS.gene066269:CDS |
| AACTCTTCACAGAATTTACC+AGG | 0.535091 | 1.1:-71768058 | MS.gene066269:CDS |
| AAGGGTGAGAGGTTGAAGGT+TGG | 0.535869 | 1.1:-71767641 | MS.gene066269:CDS |
| TCGGAGACAGCGCTTGTGAA+GGG | 0.542077 | 1.1:-71767659 | MS.gene066269:CDS |
| ATTGTAGTGTTGGCGAATTG+GGG | 0.548453 | 1.1:+71768177 | None:intergenic |
| AGTGGAATCCATAGAAGCTA+GGG | 0.550169 | 1.1:+71767991 | None:intergenic |
| TGTGAAGGGTGAGAGGTTGA+AGG | 0.554444 | 1.1:-71767645 | MS.gene066269:CDS |
| TTCTAAGTATTTATCTAGAG+AGG | 0.559027 | 1.1:-71767927 | MS.gene066269:CDS |
| GGCTGCATTGGTTGAAGCAG+GGG | 0.573870 | 1.1:-71767525 | MS.gene066269:CDS |
| CAGCGCTTGTGAAGGGTGAG+AGG | 0.592375 | 1.1:-71767652 | MS.gene066269:CDS |
| TCTATAAAGGGTAAGTTCAG+TGG | 0.595025 | 1.1:+71767973 | None:intergenic |
| AGGCTGCATTGGTTGAAGCA+GGG | 0.600932 | 1.1:-71767526 | MS.gene066269:CDS |
| GATGAAGGAATGCGATGATG+AGG | 0.601681 | 1.1:-71767582 | MS.gene066269:CDS |
| ACATAGCTACCTTGAACACC+TGG | 0.601923 | 1.1:+71768040 | None:intergenic |
| TGAGACATACACAAGGACAT+AGG | 0.603141 | 1.1:-71767333 | None:intergenic |
| GATCAAGGAAGATGAAATTG+GGG | 0.606167 | 1.1:-71767474 | MS.gene066269:CDS |
| GATGATGAGGCTTTGAAAAG+GGG | 0.611939 | 1.1:-71767569 | MS.gene066269:CDS |
| TGGAAGACCAAGATGGCATG+AGG | 0.616337 | 1.1:+71768131 | None:intergenic |
| GAAGATTGGAGAAGAAGACA+AGG | 0.629073 | 1.1:+71768294 | None:intergenic |
| AAATGAGCTTTAATCAAATG+GGG | 0.636157 | 1.1:+71767863 | None:intergenic |
| GAAGGGGTGGAAGACCAAGA+TGG | 0.648922 | 1.1:+71768124 | None:intergenic |
| AAGACCAAGATGGCATGAGG+AGG | 0.652328 | 1.1:+71768134 | None:intergenic |
| ATGATGAGGCTTTGAAAAGG+GGG | 0.653133 | 1.1:-71767568 | MS.gene066269:CDS |
| AGCCAAACCAGAAACACAAG+AGG | 0.653819 | 1.1:+71767949 | None:intergenic |
| AATGTAAGGGAAAGAAGGGG+TGG | 0.662449 | 1.1:+71768111 | None:intergenic |
| ATCAAGGAAGATGAAATTGG+GGG | 0.695243 | 1.1:-71767473 | MS.gene066269:CDS |
| TCAAGGAAGATGAAATTGGG+GGG | 0.718689 | 1.1:-71767472 | MS.gene066269:CDS |
| TTGTTTATGAGACATACACA+AGG | 0.727977 | 1.1:-71767340 | MS.gene066269:CDS |
| GCCAATGTAAGGGAAAGAAG+GGG | 0.729180 | 1.1:+71768108 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTATTAATTTGGAAT+AGG | - | chr1.1:71767836-71767855 | MS.gene066269:CDS | 15.0% |
| !!! | AATTAATACTTTTTTCAAAC+TGG | + | chr1.1:71767830-71767849 | None:intergenic | 15.0% |
| !!! | ATTAATACTTTTTTCAAACT+GGG | + | chr1.1:71767829-71767848 | None:intergenic | 15.0% |
| !!! | GTTTGAAAAAAGTATTAATT+TGG | - | chr1.1:71767830-71767849 | MS.gene066269:CDS | 15.0% |
| !!! | AAAAATGAGCTTTAATCAAA+TGG | + | chr1.1:71767798-71767817 | None:intergenic | 20.0% |
| !!! | AAAATGAGCTTTAATCAAAT+GGG | + | chr1.1:71767797-71767816 | None:intergenic | 20.0% |
| ! | TTATTAGAGGTGATAAAGTT+GGG | - | chr1.1:71768220-71768239 | MS.gene066269:CDS | 25.0% |
| ! | TTCTAAGTATTTATCTAGAG+AGG | - | chr1.1:71767729-71767748 | MS.gene066269:CDS | 25.0% |
| !! | AAATGAGCTTTAATCAAATG+GGG | + | chr1.1:71767796-71767815 | None:intergenic | 25.0% |
| AAACACAAGAGGTTCTATAA+AGG | + | chr1.1:71767699-71767718 | None:intergenic | 30.0% | |
| AACACAAGAGGTTCTATAAA+GGG | + | chr1.1:71767698-71767717 | None:intergenic | 30.0% | |
| CTTATTAGAGGTGATAAAGT+TGG | - | chr1.1:71768219-71768238 | MS.gene066269:CDS | 30.0% | |
| GGATAGTGATATTCTTGTTA+TGG | - | chr1.1:71767750-71767769 | MS.gene066269:CDS | 30.0% | |
| TGATCAAGGAAGATGAAATT+GGG | - | chr1.1:71768181-71768200 | MS.gene066269:CDS | 30.0% | |
| TTGTTTATGAGACATACACA+AGG | - | chr1.1:71768316-71768335 | MS.gene066269:CDS | 30.0% | |
| ! | AAATTCTGTGAAGAGTTTTC+AGG | + | chr1.1:71767595-71767614 | None:intergenic | 30.0% |
| ! | AATTCTGTGAAGAGTTTTCA+GGG | + | chr1.1:71767594-71767613 | None:intergenic | 30.0% |
| ! | AGTGATATTCTTGTTATGGT+TGG | - | chr1.1:71767754-71767773 | MS.gene066269:CDS | 30.0% |
| ! | CAAGGTTATTTCATCTTTGT+TGG | + | chr1.1:71767347-71767366 | None:intergenic | 30.0% |
| ! | GAAAGTTTTTGTTGACAATG+AGG | - | chr1.1:71768110-71768129 | MS.gene066269:CDS | 30.0% |
| ! | GTTCTTTTCAATTCAACAAC+TGG | - | chr1.1:71767637-71767656 | MS.gene066269:CDS | 30.0% |
| ! | TTCTTTTAAGCATTCGATGA+AGG | - | chr1.1:71768059-71768078 | MS.gene066269:CDS | 30.0% |
| ! | TTTTCAGTGGATATGAAGAT+TGG | + | chr1.1:71767379-71767398 | None:intergenic | 30.0% |
| !! | TTAAAGCTCATTTTTCAGCT+AGG | - | chr1.1:71767803-71767822 | MS.gene066269:CDS | 30.0% |
| !!! | ATTACTGTTTTCAAGTCTGT+TGG | - | chr1.1:71768261-71768280 | MS.gene066269:CDS | 30.0% |
| AACTCTTCACAGAATTTACC+AGG | - | chr1.1:71767598-71767617 | MS.gene066269:CDS | 35.0% | |
| AGTTGAAAAGGCGAAAACTT+TGG | - | chr1.1:71767861-71767880 | MS.gene066269:CDS | 35.0% | |
| ATCAAGGAAGATGAAATTGG+GGG | - | chr1.1:71768183-71768202 | MS.gene066269:CDS | 35.0% | |
| GATCAAGGAAGATGAAATTG+GGG | - | chr1.1:71768182-71768201 | MS.gene066269:CDS | 35.0% | |
| GCAGAAAGGTTGAAACTTTA+GGG | + | chr1.1:71767456-71767475 | None:intergenic | 35.0% | |
| GGATTGGATGTGATTGATTA+GGG | + | chr1.1:71767428-71767447 | None:intergenic | 35.0% | |
| GTGATCAAGGAAGATGAAAT+TGG | - | chr1.1:71768180-71768199 | MS.gene066269:CDS | 35.0% | |
| GTGATTGATTAGGGTTTGAT+GGG | + | chr1.1:71767419-71767438 | None:intergenic | 35.0% | |
| TATAGAACCTCTTGTGTTTC+TGG | - | chr1.1:71767700-71767719 | MS.gene066269:CDS | 35.0% | |
| TCTATAAAGGGTAAGTTCAG+TGG | + | chr1.1:71767686-71767705 | None:intergenic | 35.0% | |
| TGCAGAAAGGTTGAAACTTT+AGG | + | chr1.1:71767457-71767476 | None:intergenic | 35.0% | |
| TGTGATTGATTAGGGTTTGA+TGG | + | chr1.1:71767420-71767439 | None:intergenic | 35.0% | |
| TTGGAATAGGACAGTTGAAA+AGG | - | chr1.1:71767849-71767868 | MS.gene066269:CDS | 35.0% | |
| ! | AAACTTTAGGGAGATTGGAT+TGG | + | chr1.1:71767444-71767463 | None:intergenic | 35.0% |
| ! | GGTTATTTCATCTTTGTTGG+TGG | + | chr1.1:71767344-71767363 | None:intergenic | 35.0% |
| ! | TGGATTGGATGTGATTGATT+AGG | + | chr1.1:71767429-71767448 | None:intergenic | 35.0% |
| !! | AACTTGTTGGAGCTTATTAG+AGG | - | chr1.1:71768207-71768226 | MS.gene066269:CDS | 35.0% |
| !! | TGAAGAGTTTTCAGGGAAAT+GGG | + | chr1.1:71767587-71767606 | None:intergenic | 35.0% |
| AAGGAGAGAGATTGTAGTGT+TGG | + | chr1.1:71767492-71767511 | None:intergenic | 40.0% | |
| AGTGGAATCCATAGAAGCTA+GGG | + | chr1.1:71767668-71767687 | None:intergenic | 40.0% | |
| CAGAATTTACCAGGTGTTCA+AGG | - | chr1.1:71767607-71767626 | MS.gene066269:CDS | 40.0% | |
| GAAGATTGGAGAAGAAGACA+AGG | + | chr1.1:71767365-71767384 | None:intergenic | 40.0% | |
| TCAAGGAAGATGAAATTGGG+GGG | - | chr1.1:71768184-71768203 | MS.gene066269:CDS | 40.0% | |
| TGGATGAGGTTGTTGGATTT+GGG | - | chr1.1:71767950-71767969 | MS.gene066269:CDS | 40.0% | |
| TTCTGCTGTTGTTGATATGC+TGG | - | chr1.1:71768284-71768303 | MS.gene066269:CDS | 40.0% | |
| TTGGATGAGGTTGTTGGATT+TGG | - | chr1.1:71767949-71767968 | MS.gene066269:CDS | 40.0% | |
| ! | ACGAGTTTTACGCCAATGTA+AGG | + | chr1.1:71767562-71767581 | None:intergenic | 40.0% |
| ! | AGCGATGAATTTTCGCTTTC+AGG | - | chr1.1:71767901-71767920 | MS.gene066269:CDS | 40.0% |
| ! | ATTCTTGTTATGGTTGGTGC+TGG | - | chr1.1:71767760-71767779 | MS.gene066269:CDS | 40.0% |
| ! | CGAGTTTTACGCCAATGTAA+GGG | + | chr1.1:71767561-71767580 | None:intergenic | 40.0% |
| ! | GATGGTTCGTAGATTTTCAG+TGG | + | chr1.1:71767392-71767411 | None:intergenic | 40.0% |
| ! | GCGATGAATTTTCGCTTTCA+GGG | - | chr1.1:71767902-71767921 | MS.gene066269:CDS | 40.0% |
| ! | GGTTGAAACTTTAGGGAGAT+TGG | + | chr1.1:71767449-71767468 | None:intergenic | 40.0% |
| ! | TGTGAGCTGTGCTACTAATT+CGG | - | chr1.1:71767978-71767997 | MS.gene066269:CDS | 40.0% |
| ! | TTCTTGTTATGGTTGGTGCT+GGG | - | chr1.1:71767761-71767780 | MS.gene066269:CDS | 40.0% |
| !! | AACCTCTTGTGTTTCTGGTT+TGG | - | chr1.1:71767705-71767724 | MS.gene066269:CDS | 40.0% |
| !! | AGATTGTAGTGTTGGCGAAT+TGG | + | chr1.1:71767484-71767503 | None:intergenic | 40.0% |
| !! | ATGATGAGGCTTTGAAAAGG+GGG | - | chr1.1:71768088-71768107 | MS.gene066269:CDS | 40.0% |
| !! | ATTGTAGTGTTGGCGAATTG+GGG | + | chr1.1:71767482-71767501 | None:intergenic | 40.0% |
| !! | CGATGATGAGGCTTTGAAAA+GGG | - | chr1.1:71768086-71768105 | MS.gene066269:CDS | 40.0% |
| !! | CTTTCAGGGTTGAGTTTTGA+GGG | - | chr1.1:71767916-71767935 | MS.gene066269:CDS | 40.0% |
| !! | GATGATGAGGCTTTGAAAAG+GGG | - | chr1.1:71768087-71768106 | MS.gene066269:CDS | 40.0% |
| !! | GATTGTAGTGTTGGCGAATT+GGG | + | chr1.1:71767483-71767502 | None:intergenic | 40.0% |
| !! | GTGAAGAGTTTTCAGGGAAA+TGG | + | chr1.1:71767588-71767607 | None:intergenic | 40.0% |
| !! | TTTTGAAAGGGGTGTGATCA+AGG | - | chr1.1:71768167-71768186 | MS.gene066269:CDS | 40.0% |
| !! | TTTTGAGGGTTGTGGGAATT+TGG | - | chr1.1:71767930-71767949 | MS.gene066269:CDS | 40.0% |
| AATGTAAGGGAAAGAAGGGG+TGG | + | chr1.1:71767548-71767567 | None:intergenic | 45.0% | |
| ACATAGCTACCTTGAACACC+TGG | + | chr1.1:71767619-71767638 | None:intergenic | 45.0% | |
| ACCCCTTCTTTCCCTTACAT+TGG | - | chr1.1:71767547-71767566 | MS.gene066269:CDS | 45.0% | |
| ACGCCAATGTAAGGGAAAGA+AGG | + | chr1.1:71767553-71767572 | None:intergenic | 45.0% | |
| AGCCAAACCAGAAACACAAG+AGG | + | chr1.1:71767710-71767729 | None:intergenic | 45.0% | |
| AGTTGGGAGAAGCAGTTTAG+AGG | - | chr1.1:71768236-71768255 | MS.gene066269:CDS | 45.0% | |
| ATGAGGAGGAGAGAAGAAGA+AGG | + | chr1.1:71767511-71767530 | None:intergenic | 45.0% | |
| CAGTGGAATCCATAGAAGCT+AGG | + | chr1.1:71767669-71767688 | None:intergenic | 45.0% | |
| CGCCAATGTAAGGGAAAGAA+GGG | + | chr1.1:71767552-71767571 | None:intergenic | 45.0% | |
| GATGAAGGAATGCGATGATG+AGG | - | chr1.1:71768074-71768093 | MS.gene066269:CDS | 45.0% | |
| GCCAATGTAAGGGAAAGAAG+GGG | + | chr1.1:71767551-71767570 | None:intergenic | 45.0% | |
| GGATGAGGTTGTTGGATTTG+GGG | - | chr1.1:71767951-71767970 | MS.gene066269:CDS | 45.0% | |
| GGGAATTTGGATGAGGTTGT+TGG | - | chr1.1:71767943-71767962 | MS.gene066269:CDS | 45.0% | |
| GGTTGGAGCTCATTTGGATT+TGG | - | chr1.1:71768032-71768051 | MS.gene066269:CDS | 45.0% | |
| GTTGAAGGTTGGAGCTCATT+TGG | - | chr1.1:71768026-71768045 | MS.gene066269:CDS | 45.0% | |
| TGAAATTGGGGGGAACTTGT+TGG | - | chr1.1:71768194-71768213 | MS.gene066269:CDS | 45.0% | |
| TGGTCAAACCCTAGCTTCTA+TGG | - | chr1.1:71767657-71767676 | MS.gene066269:CDS | 45.0% | |
| TGTTGACAATGAGGCTGCAT+TGG | - | chr1.1:71768119-71768138 | MS.gene066269:CDS | 45.0% | |
| ! | AGCTTGTGGGTGCTTTTGAA+AGG | - | chr1.1:71768154-71768173 | MS.gene066269:CDS | 45.0% |
| ! | GCTTTCAGGGTTGAGTTTTG+AGG | - | chr1.1:71767915-71767934 | MS.gene066269:CDS | 45.0% |
| ! | GGAGCTCATTTGGATTTGGT+TGG | - | chr1.1:71768036-71768055 | MS.gene066269:CDS | 45.0% |
| ! | TGATTAGGGTTTGATGGGTG+AGG | + | chr1.1:71767414-71767433 | None:intergenic | 45.0% |
| !! | CTTGTGGGTGCTTTTGAAAG+GGG | - | chr1.1:71768156-71768175 | MS.gene066269:CDS | 45.0% |
| !! | GCGATGATGAGGCTTTGAAA+AGG | - | chr1.1:71768085-71768104 | MS.gene066269:CDS | 45.0% |
| !! | GCTTGTGGGTGCTTTTGAAA+GGG | - | chr1.1:71768155-71768174 | MS.gene066269:CDS | 45.0% |
| !! | TCTTGTTATGGTTGGTGCTG+GGG | - | chr1.1:71767762-71767781 | MS.gene066269:CDS | 45.0% |
| !!! | GGTTGAGTTTTGAGGGTTGT+GGG | - | chr1.1:71767923-71767942 | MS.gene066269:CDS | 45.0% |
| AAGACCAAGATGGCATGAGG+AGG | + | chr1.1:71767525-71767544 | None:intergenic | 50.0% | |
| AAGGGTGAGAGGTTGAAGGT+TGG | - | chr1.1:71768015-71768034 | MS.gene066269:CDS | 50.0% | |
| GCGAATTGGGGTTTGCAGAA+AGG | + | chr1.1:71767470-71767489 | None:intergenic | 50.0% | |
| GGGTTGTGGGAATTTGGATG+AGG | - | chr1.1:71767936-71767955 | MS.gene066269:CDS | 50.0% | |
| TGGAAGACCAAGATGGCATG+AGG | + | chr1.1:71767528-71767547 | None:intergenic | 50.0% | |
| TGTGAAGGGTGAGAGGTTGA+AGG | - | chr1.1:71768011-71768030 | MS.gene066269:CDS | 50.0% | |
| ! | TAGGGTTTGATGGGTGAGGA+TGG | + | chr1.1:71767410-71767429 | None:intergenic | 50.0% |
| !! | AGGCTGCATTGGTTGAAGCA+GGG | - | chr1.1:71768130-71768149 | MS.gene066269:CDS | 50.0% |
| !!! | GGGTTGAGTTTTGAGGGTTG+TGG | - | chr1.1:71767922-71767941 | MS.gene066269:CDS | 50.0% |
| CTCTCCTCCTCATGCCATCT+TGG | - | chr1.1:71767518-71767537 | MS.gene066269:CDS | 55.0% | |
| GAAGGGGTGGAAGACCAAGA+TGG | + | chr1.1:71767535-71767554 | None:intergenic | 55.0% | |
| GTTGAAGCAGGGGAGCTTGT+GGG | - | chr1.1:71768141-71768160 | MS.gene066269:CDS | 55.0% | |
| TCGGAGACAGCGCTTGTGAA+GGG | - | chr1.1:71767997-71768016 | MS.gene066269:CDS | 55.0% | |
| TTCGGAGACAGCGCTTGTGA+AGG | - | chr1.1:71767996-71768015 | MS.gene066269:CDS | 55.0% | |
| !! | GAGGCTGCATTGGTTGAAGC+AGG | - | chr1.1:71768129-71768148 | MS.gene066269:CDS | 55.0% |
| !! | GGCTGCATTGGTTGAAGCAG+GGG | - | chr1.1:71768131-71768150 | MS.gene066269:CDS | 55.0% |
| CAGCGCTTGTGAAGGGTGAG+AGG | - | chr1.1:71768004-71768023 | MS.gene066269:CDS | 60.0% | |
| GGTTGAAGCAGGGGAGCTTG+TGG | - | chr1.1:71768140-71768159 | MS.gene066269:CDS | 60.0% | |
| !! | TATGGTTGGTGCTGGGGCTC+TGG | - | chr1.1:71767768-71767787 | MS.gene066269:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 71767334 | 71768344 | 71767334 | ID=MS.gene066269 |
| chr1.1 | mRNA | 71767334 | 71768344 | 71767334 | ID=MS.gene066269.t1;Parent=MS.gene066269 |
| chr1.1 | exon | 71767334 | 71768344 | 71767334 | ID=MS.gene066269.t1.exon1;Parent=MS.gene066269.t1 |
| chr1.1 | CDS | 71767334 | 71768344 | 71767334 | ID=cds.MS.gene066269.t1;Parent=MS.gene066269.t1 |
| Gene Sequence |
| Protein sequence |
