AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067185

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067185.t1 MTR_1g035730 95.402 348 16 0 1 348 103 450 0.0 704
MS.gene067185.t1 MTR_1g069460 46.197 355 182 3 1 348 185 537 3.45e-107 327
MS.gene067185.t1 MTR_7g098650 45.352 355 185 3 1 348 110 462 1.33e-105 320
MS.gene067185.t1 MTR_5g055350 43.094 362 186 5 1 348 83 438 1.03e-96 295
MS.gene067185.t1 MTR_4g129930 42.897 359 191 4 1 348 102 457 2.97e-96 294
MS.gene067185.t1 MTR_3g084400 42.432 370 198 4 1 358 98 464 4.84e-96 294
MS.gene067185.t1 MTR_5g095940 41.667 360 197 3 1 348 125 483 5.11e-90 279
MS.gene067185.t1 MTR_5g010370 40.113 354 200 9 1 348 191 538 1.39e-85 269
MS.gene067185.t1 MTR_3g007840 40.000 360 180 4 1 348 53 388 9.48e-84 260
MS.gene067185.t1 MTR_1g102430 41.274 361 191 10 2 348 132 485 1.66e-83 262
MS.gene067185.t1 MTR_5g010350 39.266 354 203 9 1 348 167 514 5.22e-81 256
MS.gene067185.t1 MTR_4g119810 35.580 371 211 11 1 347 73 439 5.00e-65 213
MS.gene067185.t1 MTR_5g095950 34.444 360 192 4 1 348 98 425 1.21e-63 211
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067185.t1 AT1G68470 65.057 352 116 3 1 350 99 445 1.29e-174 493
MS.gene067185.t1 AT2G20370 45.352 355 185 3 1 348 182 534 3.11e-103 317
MS.gene067185.t1 AT2G29040 45.787 356 183 6 1 348 330 683 1.77e-102 318
MS.gene067185.t1 AT4G13990 43.697 357 188 6 1 348 128 480 5.45e-97 298
MS.gene067185.t1 AT4G13990 43.697 357 188 6 1 348 128 480 5.45e-97 298
MS.gene067185.t1 AT2G31990 41.989 362 193 9 1 348 106 464 1.46e-91 282
MS.gene067185.t1 AT2G31990 41.989 362 193 9 1 348 114 472 1.55e-91 283
MS.gene067185.t1 AT2G31990 41.989 362 193 9 1 348 152 510 3.52e-91 283
MS.gene067185.t1 AT5G62220 42.005 369 191 12 2 355 150 510 2.78e-90 280
MS.gene067185.t1 AT2G32750 40.000 360 195 8 1 345 114 467 3.49e-87 272
MS.gene067185.t1 AT2G32750 40.000 360 195 8 1 345 116 469 3.68e-87 272
MS.gene067185.t1 AT2G32740 38.798 366 198 9 2 348 98 456 1.18e-85 267
MS.gene067185.t1 AT5G41250 38.701 354 202 8 1 348 208 552 1.70e-82 261
MS.gene067185.t1 AT1G63450 39.377 353 203 9 1 348 310 656 2.42e-80 258
MS.gene067185.t1 AT4G22580 36.314 369 205 13 1 348 68 427 2.27e-66 216
MS.gene067185.t1 AT1G67410 27.273 264 132 10 25 264 103 330 1.88e-12 68.6

Find 83 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAATAAAATTGCTTGATT+TGG 0.211286 1.2:+20806254 None:intergenic
TCCTCAAGTGGGTCCGATTT+TGG 0.211507 1.2:-20806053 MS.gene067185:CDS
GGAGGTGTTAATGGGAATTA+AGG 0.251312 1.2:-20805487 MS.gene067185:CDS
TTGCACTTCAAGGAATTTCT+AGG 0.273213 1.2:-20805359 MS.gene067185:CDS
TATGATTGAGGAGGTGTTAA+TGG 0.285044 1.2:-20805496 MS.gene067185:CDS
ATGGAAGTGATGTTGGGTTT+AGG 0.291151 1.2:-20805395 MS.gene067185:CDS
TGGAAGTGATGTTGGGTTTA+GGG 0.307951 1.2:-20805394 MS.gene067185:CDS
TTTATTGGTGGTAAAAGAAA+AGG 0.356201 1.2:-20805843 MS.gene067185:CDS
AAATCATTTCTGCTAAGAAT+TGG 0.356315 1.2:+20806318 None:intergenic
TTGTGATTGGTTTGATCCCT+AGG 0.363693 1.2:-20805437 MS.gene067185:CDS
AAGCCATTGTTCTTCACATA+AGG 0.363823 1.2:+20806380 None:intergenic
TAATATGTTGGCTCCAAAAT+CGG 0.397853 1.2:+20806040 None:intergenic
CTTTGCAAGTTGGTTGATTG+TGG 0.403002 1.2:-20805765 MS.gene067185:CDS
ACCCAACATCACTTCCATTC+GGG 0.422139 1.2:+20805400 None:intergenic
TTTGCAAGTTGGTTGATTGT+GGG 0.424528 1.2:-20805764 MS.gene067185:CDS
TAAGCACTTCCATTGGTTGA+TGG 0.433760 1.2:+20805724 None:intergenic
AACCCAACATCACTTCCATT+CGG 0.447585 1.2:+20805399 None:intergenic
AACAGTTGAACGACAACCTT+GGG 0.449885 1.2:-20805982 MS.gene067185:CDS
GCTGTTGATGTTGCACTTCA+AGG 0.452646 1.2:-20805369 MS.gene067185:CDS
ATGATTGAGGAGGTGTTAAT+GGG 0.454804 1.2:-20805495 MS.gene067185:CDS
ACCCGAATGGAAGTGATGTT+GGG 0.466760 1.2:-20805401 MS.gene067185:CDS
AAAATGCGTGAAGTTGTGAT+TGG 0.474380 1.2:-20805450 MS.gene067185:CDS
TTATTGGTGGTAAAAGAAAA+GGG 0.481389 1.2:-20805842 MS.gene067185:CDS
AAAGAAGAGTAATATGATTG+AGG 0.481487 1.2:-20805508 MS.gene067185:CDS
AGCCATTGTTCTTCACATAA+GGG 0.484383 1.2:+20806381 None:intergenic
GGTGGTAAAAGAAAAGGGTT+AGG 0.485876 1.2:-20805837 MS.gene067185:CDS
GGATGAAAATACGACGGGTA+AGG 0.495809 1.2:+20805936 None:intergenic
TGCAAGTTGGTTGATTGTGG+GGG 0.509533 1.2:-20805762 MS.gene067185:CDS
AACGGCTAGGGCGTCGCGGA+GGG 0.513998 1.2:+20806175 None:intergenic
CACCCGAATGGAAGTGATGT+TGG 0.518128 1.2:-20805402 MS.gene067185:CDS
GATTTCATGCGGTCCTCAAG+TGG 0.526085 1.2:-20806065 MS.gene067185:CDS
TGAGTCATCTCTTTGCAAGT+TGG 0.526643 1.2:-20805775 MS.gene067185:CDS
ATCGATTAGATCAACGGCTA+GGG 0.529120 1.2:+20806163 None:intergenic
TATTCGGTTTATATTGAAGA+GGG 0.531841 1.2:-20805540 MS.gene067185:CDS
GTTAGTTATGCGCACCCGAA+TGG 0.531970 1.2:-20805414 MS.gene067185:CDS
TTATTCTACGTACCATTCTA+CGG 0.532676 1.2:-20806239 MS.gene067185:CDS
TCCAAAATCGGACCCACTTG+AGG 0.536553 1.2:+20806052 None:intergenic
TATGTGAAGAACAATGGCTT+AGG 0.537393 1.2:-20806377 MS.gene067185:CDS
GGAAGTGCTTAGTGTTATGA+TGG 0.538008 1.2:-20805712 MS.gene067185:CDS
TGTGATTGGTTTGATCCCTA+GGG 0.538386 1.2:-20805436 MS.gene067185:CDS
TCTCATCTGGCAAATACCAA+TGG 0.538751 1.2:+20805571 None:intergenic
GCGTGTAGTCCACCGTAGAA+TGG 0.539802 1.2:+20806227 None:intergenic
TTTCTCTGGGAAGGACCGCA+TGG 0.552309 1.2:-20806088 MS.gene067185:CDS
TTCGGTTTATATTGAAGAGG+GGG 0.555328 1.2:-20805538 MS.gene067185:CDS
TCGGTTTATATTGAAGAGGG+GGG 0.560733 1.2:-20805537 MS.gene067185:CDS
ACGTACAAAGTCTACCTTGG+TGG 0.563066 1.2:-20806139 MS.gene067185:CDS
GTGGAATCGTCACAATGGTA+AGG 0.566019 1.2:-20806120 MS.gene067185:CDS
TGGGAAGGTTATAATCAAAA+CGG 0.566648 1.2:-20805963 MS.gene067185:CDS
TTGCAAGTTGGTTGATTGTG+GGG 0.567948 1.2:-20805763 MS.gene067185:CDS
ATAACACTAAGCACTTCCAT+TGG 0.568604 1.2:+20805717 None:intergenic
TACGTGATCGATTAGATCAA+CGG 0.569790 1.2:+20806157 None:intergenic
TTCTCTGGGAAGGACCGCAT+GGG 0.570266 1.2:-20806087 MS.gene067185:CDS
TAACAGTTGAACGACAACCT+TGG 0.570721 1.2:-20805983 MS.gene067185:CDS
GTTAATGGGAATTAAGGAGG+TGG 0.571636 1.2:-20805481 MS.gene067185:CDS
GATCGATTAGATCAACGGCT+AGG 0.574905 1.2:+20806162 None:intergenic
TGGTAGGTTTAATAATATGT+TGG 0.579142 1.2:+20806028 None:intergenic
AAAATCACGTGTGTCGCACG+AGG 0.581729 1.2:-20806280 MS.gene067185:CDS
CAGCGTATACGCAATACCAT+TGG 0.583630 1.2:-20805587 MS.gene067185:CDS
ATAAAATGCGACAAAACGAC+AGG 0.586066 1.2:-20805881 MS.gene067185:CDS
GAAGAGTAATATGATTGAGG+AGG 0.587479 1.2:-20805505 MS.gene067185:CDS
GGGTGCGCATAACTAACCCT+AGG 0.588239 1.2:+20805420 None:intergenic
TAGTAAATGCCATCAACCAA+TGG 0.589401 1.2:-20805733 MS.gene067185:CDS
CAAAAGAAGAAATGCTGACG+TGG 0.592552 1.2:-20805908 MS.gene067185:CDS
CAACGGCTAGGGCGTCGCGG+AGG 0.596262 1.2:+20806174 None:intergenic
ATTTCATGCGGTCCTCAAGT+GGG 0.605471 1.2:-20806064 MS.gene067185:CDS
ATCACGTACAAAGTCTACCT+TGG 0.618880 1.2:-20806142 MS.gene067185:CDS
CTTCTAGTAAAAGAATCACC+TGG 0.626474 1.2:+20805666 None:intergenic
GGTGCGCATAACTAACCCTA+GGG 0.632069 1.2:+20805421 None:intergenic
GTTGAACGACAACCTTGGGA+AGG 0.641260 1.2:-20805978 MS.gene067185:CDS
CCTTGGTGGAATCGTCACAA+TGG 0.642551 1.2:-20806125 MS.gene067185:CDS
GTATTCGGTTTATATTGAAG+AGG 0.643890 1.2:-20805541 MS.gene067185:CDS
ATTCGGTTTATATTGAAGAG+GGG 0.647421 1.2:-20805539 MS.gene067185:CDS
GGTGTTAATGGGAATTAAGG+AGG 0.648081 1.2:-20805484 MS.gene067185:CDS
GGAGGGTGTGATTCGCCTCG+CGG 0.649710 1.2:+20806192 None:intergenic
TATTGCGTATACGCTGTATG+TGG 0.654666 1.2:+20805594 None:intergenic
TTCTACGTACCATTCTACGG+TGG 0.662207 1.2:-20806236 MS.gene067185:CDS
CGCTTCAAGCATGTTCCGCG+AGG 0.663884 1.2:-20806207 MS.gene067185:CDS
GGACCGCATGGGATTTCATG+CGG 0.671183 1.2:-20806076 MS.gene067185:CDS
AAATCACGTGTGTCGCACGA+GGG 0.671803 1.2:-20806279 MS.gene067185:CDS
TGCCCTTATGTGAAGAACAA+TGG 0.674537 1.2:-20806383 MS.gene067185:CDS
GATCAACGGCTAGGGCGTCG+CGG 0.682753 1.2:+20806171 None:intergenic
CCATTGTGACGATTCCACCA+AGG 0.707079 1.2:+20806125 None:intergenic
GGACCGCATGAAATCCCATG+CGG 0.771513 1.2:+20806073 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CCAATAAATGAAAACAAAAA+CGG + chr1.2:20805860-20805879 None:intergenic 20.0%
!! TAGAATAAAATTGCTTGATT+TGG + chr1.2:20805464-20805483 None:intergenic 20.0%
!!! TTTTTGTTTTCATTTATTGG+TGG - chr1.2:20805860-20805879 MS.gene067185:CDS 20.0%
! AAAGAAGAGTAATATGATTG+AGG - chr1.2:20806207-20806226 MS.gene067185:CDS 25.0%
! AAATCATTTCTGCTAAGAAT+TGG + chr1.2:20805400-20805419 None:intergenic 25.0%
! AGATGAGAAAAATACGTATT+CGG - chr1.2:20806159-20806178 MS.gene067185:CDS 25.0%
! TATTCGGTTTATATTGAAGA+GGG - chr1.2:20806175-20806194 MS.gene067185:CDS 25.0%
! TGGTAGGTTTAATAATATGT+TGG + chr1.2:20805690-20805709 None:intergenic 25.0%
!! TTATTGGTGGTAAAAGAAAA+GGG - chr1.2:20805873-20805892 MS.gene067185:CDS 25.0%
!! TTTATTGGTGGTAAAAGAAA+AGG - chr1.2:20805872-20805891 MS.gene067185:CDS 25.0%
!!! AAGGATCATTTTATTTCTCT+GGG - chr1.2:20805614-20805633 MS.gene067185:CDS 25.0%
!!! AGCATTTCTTCTTTTGTTTT+TGG + chr1.2:20805803-20805822 None:intergenic 25.0%
!!! CCGTTTTTGTTTTCATTTAT+TGG - chr1.2:20805857-20805876 MS.gene067185:CDS 25.0%
!!! TAAGGATCATTTTATTTCTC+TGG - chr1.2:20805613-20805632 MS.gene067185:CDS 25.0%
ATTCGGTTTATATTGAAGAG+GGG - chr1.2:20806176-20806195 MS.gene067185:CDS 30.0%
GTATTCGGTTTATATTGAAG+AGG - chr1.2:20806174-20806193 MS.gene067185:CDS 30.0%
TGGGAAGGTTATAATCAAAA+CGG - chr1.2:20805752-20805771 MS.gene067185:CDS 30.0%
TTATTCTACGTACCATTCTA+CGG - chr1.2:20805476-20805495 MS.gene067185:CDS 30.0%
! GAATACGTATTTTTCTCATC+TGG + chr1.2:20806160-20806179 None:intergenic 30.0%
! TTTTTGGATGAAAATACGAC+GGG + chr1.2:20805787-20805806 None:intergenic 30.0%
!! ATCATTTTATTTCTCTGGGA+AGG - chr1.2:20805618-20805637 MS.gene067185:CDS 30.0%
!! GTTTTTGGATGAAAATACGA+CGG + chr1.2:20805788-20805807 None:intergenic 30.0%
!! TAATATGTTGGCTCCAAAAT+CGG + chr1.2:20805678-20805697 None:intergenic 30.0%
!! TTTTGATTATAACCTTCCCA+AGG + chr1.2:20805752-20805771 None:intergenic 30.0%
AAAATGCGTGAAGTTGTGAT+TGG - chr1.2:20806265-20806284 MS.gene067185:CDS 35.0%
AAGCCATTGTTCTTCACATA+AGG + chr1.2:20805338-20805357 None:intergenic 35.0%
AGCCATTGTTCTTCACATAA+GGG + chr1.2:20805337-20805356 None:intergenic 35.0%
ATAAAATGCGACAAAACGAC+AGG - chr1.2:20805834-20805853 MS.gene067185:CDS 35.0%
ATAACACTAAGCACTTCCAT+TGG + chr1.2:20806001-20806020 None:intergenic 35.0%
CTTCTAGTAAAAGAATCACC+TGG + chr1.2:20806052-20806071 None:intergenic 35.0%
GAAGAGTAATATGATTGAGG+AGG - chr1.2:20806210-20806229 MS.gene067185:CDS 35.0%
GTATGTGGAGAGAAAAATAC+AGG + chr1.2:20806109-20806128 None:intergenic 35.0%
TACGTGATCGATTAGATCAA+CGG + chr1.2:20805561-20805580 None:intergenic 35.0%
TAGTAAATGCCATCAACCAA+TGG - chr1.2:20805982-20806001 MS.gene067185:CDS 35.0%
TATGTGAAGAACAATGGCTT+AGG - chr1.2:20805338-20805357 MS.gene067185:CDS 35.0%
TTCGGTTTATATTGAAGAGG+GGG - chr1.2:20806177-20806196 MS.gene067185:CDS 35.0%
TTGCACTTCAAGGAATTTCT+AGG - chr1.2:20806356-20806375 MS.gene067185:CDS 35.0%
! CAGAAATGATTTTCCATGCT+AGG - chr1.2:20805408-20805427 MS.gene067185:CDS 35.0%
! CAGGTGATTCTTTTACTAGA+AGG - chr1.2:20806050-20806069 MS.gene067185:CDS 35.0%
!! AATTTCTAGGCTTTTGTTCG+AGG - chr1.2:20806369-20806388 MS.gene067185:CDS 35.0%
!! ACTTTTGACTCTATACTTGC+TGG - chr1.2:20806076-20806095 MS.gene067185:CDS 35.0%
!! ATGATTGAGGAGGTGTTAAT+GGG - chr1.2:20806220-20806239 MS.gene067185:CDS 35.0%
!! GTACCATGATGTTTTTGAGA+GGG + chr1.2:20805369-20805388 None:intergenic 35.0%
!! TACCATGATGTTTTTGAGAG+GGG + chr1.2:20805368-20805387 None:intergenic 35.0%
!! TATGATTGAGGAGGTGTTAA+TGG - chr1.2:20806219-20806238 MS.gene067185:CDS 35.0%
!! TGTACCATGATGTTTTTGAG+AGG + chr1.2:20805370-20805389 None:intergenic 35.0%
!! TTTGCAAGTTGGTTGATTGT+GGG - chr1.2:20805951-20805970 MS.gene067185:CDS 35.0%
AACAGTTGAACGACAACCTT+GGG - chr1.2:20805733-20805752 MS.gene067185:CDS 40.0%
AACCCAACATCACTTCCATT+CGG + chr1.2:20806319-20806338 None:intergenic 40.0%
AACCCCTCTCAAAAACATCA+TGG - chr1.2:20805363-20805382 MS.gene067185:CDS 40.0%
ACCACCTGTCAAAAACATGT+CGG - chr1.2:20805706-20805725 MS.gene067185:CDS 40.0%
ATCACGTACAAAGTCTACCT+TGG - chr1.2:20805573-20805592 MS.gene067185:CDS 40.0%
ATCGATTAGATCAACGGCTA+GGG + chr1.2:20805555-20805574 None:intergenic 40.0%
ATGGAAGTGATGTTGGGTTT+AGG - chr1.2:20806320-20806339 MS.gene067185:CDS 40.0%
CAAAAGAAGAAATGCTGACG+TGG - chr1.2:20805807-20805826 MS.gene067185:CDS 40.0%
GGTGGTAAAAGAAAAGGGTT+AGG - chr1.2:20805878-20805897 MS.gene067185:CDS 40.0%
GGTGTTAATGGGAATTAAGG+AGG - chr1.2:20806231-20806250 MS.gene067185:CDS 40.0%
GTTAATGGGAATTAAGGAGG+TGG - chr1.2:20806234-20806253 MS.gene067185:CDS 40.0%
TAACAGTTGAACGACAACCT+TGG - chr1.2:20805732-20805751 MS.gene067185:CDS 40.0%
TATTGCGTATACGCTGTATG+TGG + chr1.2:20806124-20806143 None:intergenic 40.0%
TCGGTTTATATTGAAGAGGG+GGG - chr1.2:20806178-20806197 MS.gene067185:CDS 40.0%
TCTCATCTGGCAAATACCAA+TGG + chr1.2:20806147-20806166 None:intergenic 40.0%
TGAGTCATCTCTTTGCAAGT+TGG - chr1.2:20805940-20805959 MS.gene067185:CDS 40.0%
TGCCCTTATGTGAAGAACAA+TGG - chr1.2:20805332-20805351 MS.gene067185:CDS 40.0%
TGGAAGTGATGTTGGGTTTA+GGG - chr1.2:20806321-20806340 MS.gene067185:CDS 40.0%
! CGTGATTTTCTAACCTAGCA+TGG + chr1.2:20805424-20805443 None:intergenic 40.0%
! TAAGCACTTCCATTGGTTGA+TGG + chr1.2:20805994-20806013 None:intergenic 40.0%
!! ACATGTTTTTGACAGGTGGT+AGG + chr1.2:20805706-20805725 None:intergenic 40.0%
!! CTTTGCAAGTTGGTTGATTG+TGG - chr1.2:20805950-20805969 MS.gene067185:CDS 40.0%
!! GGAAGTGCTTAGTGTTATGA+TGG - chr1.2:20806003-20806022 MS.gene067185:CDS 40.0%
!! GGAGGTGTTAATGGGAATTA+AGG - chr1.2:20806228-20806247 MS.gene067185:CDS 40.0%
!! TGTGATTGGTTTGATCCCTA+GGG - chr1.2:20806279-20806298 MS.gene067185:CDS 40.0%
!! TTGCAAGTTGGTTGATTGTG+GGG - chr1.2:20805952-20805971 MS.gene067185:CDS 40.0%
!! TTGTGATTGGTTTGATCCCT+AGG - chr1.2:20806278-20806297 MS.gene067185:CDS 40.0%
ACCCAACATCACTTCCATTC+GGG + chr1.2:20806318-20806337 None:intergenic 45.0%
ACCCGAATGGAAGTGATGTT+GGG - chr1.2:20806314-20806333 MS.gene067185:CDS 45.0%
ACGTACAAAGTCTACCTTGG+TGG - chr1.2:20805576-20805595 MS.gene067185:CDS 45.0%
ATTTCATGCGGTCCTCAAGT+GGG - chr1.2:20805651-20805670 MS.gene067185:CDS 45.0%
CAGCGTATACGCAATACCAT+TGG - chr1.2:20806128-20806147 MS.gene067185:CDS 45.0%
GATCGATTAGATCAACGGCT+AGG + chr1.2:20805556-20805575 None:intergenic 45.0%
GCTGTTGATGTTGCACTTCA+AGG - chr1.2:20806346-20806365 MS.gene067185:CDS 45.0%
GGATGAAAATACGACGGGTA+AGG + chr1.2:20805782-20805801 None:intergenic 45.0%
GTGGAATCGTCACAATGGTA+AGG - chr1.2:20805595-20805614 MS.gene067185:CDS 45.0%
TTCTACGTACCATTCTACGG+TGG - chr1.2:20805479-20805498 MS.gene067185:CDS 45.0%
! CGTTTTTGTCTTCAAGCACC+AGG - chr1.2:20806031-20806050 MS.gene067185:CDS 45.0%
! TATATTGAAGAGGGGGGTGT+AGG - chr1.2:20806184-20806203 MS.gene067185:CDS 45.0%
!! ACCGACATGTTTTTGACAGG+TGG + chr1.2:20805710-20805729 None:intergenic 45.0%
!! TGCAAGTTGGTTGATTGTGG+GGG - chr1.2:20805953-20805972 MS.gene067185:CDS 45.0%
!!! AGCACCGACATGTTTTTGAC+AGG + chr1.2:20805713-20805732 None:intergenic 45.0%
AAAATCACGTGTGTCGCACG+AGG - chr1.2:20805435-20805454 MS.gene067185:CDS 50.0%
AAATCACGTGTGTCGCACGA+GGG - chr1.2:20805436-20805455 MS.gene067185:CDS 50.0%
AGTTGGTTGATTGTGGGGGT+GGG - chr1.2:20805957-20805976 MS.gene067185:CDS 50.0%
CACCCGAATGGAAGTGATGT+TGG - chr1.2:20806313-20806332 MS.gene067185:CDS 50.0%
CCATTGTGACGATTCCACCA+AGG + chr1.2:20805593-20805612 None:intergenic 50.0%
CCTTGGTGGAATCGTCACAA+TGG - chr1.2:20805590-20805609 MS.gene067185:CDS 50.0%
GATTTCATGCGGTCCTCAAG+TGG - chr1.2:20805650-20805669 MS.gene067185:CDS 50.0%
GGTGCGCATAACTAACCCTA+GGG + chr1.2:20806297-20806316 None:intergenic 50.0%
GTTAGTTATGCGCACCCGAA+TGG - chr1.2:20806301-20806320 MS.gene067185:CDS 50.0%
GTTGAACGACAACCTTGGGA+AGG - chr1.2:20805737-20805756 MS.gene067185:CDS 50.0%
TCCAAAATCGGACCCACTTG+AGG + chr1.2:20805666-20805685 None:intergenic 50.0%
! AAGTTGGTTGATTGTGGGGG+TGG - chr1.2:20805956-20805975 MS.gene067185:CDS 50.0%
! TCCTCAAGTGGGTCCGATTT+TGG - chr1.2:20805662-20805681 MS.gene067185:CDS 50.0%
GCGTGTAGTCCACCGTAGAA+TGG + chr1.2:20805491-20805510 None:intergenic 55.0%
GGACCGCATGAAATCCCATG+CGG + chr1.2:20805645-20805664 None:intergenic 55.0%
GGACCGCATGGGATTTCATG+CGG - chr1.2:20805639-20805658 MS.gene067185:CDS 55.0%
GGGTGCGCATAACTAACCCT+AGG + chr1.2:20806298-20806317 None:intergenic 55.0%
! TTCTCTGGGAAGGACCGCAT+GGG - chr1.2:20805628-20805647 MS.gene067185:CDS 55.0%
! TTTCTCTGGGAAGGACCGCA+TGG - chr1.2:20805627-20805646 MS.gene067185:CDS 55.0%
CGCTTCAAGCATGTTCCGCG+AGG - chr1.2:20805508-20805527 MS.gene067185:CDS 60.0%
! GGAGGGTGTGATTCGCCTCG+CGG + chr1.2:20805526-20805545 None:intergenic 65.0%
!! GATCAACGGCTAGGGCGTCG+CGG + chr1.2:20805547-20805566 None:intergenic 65.0%
!! AACGGCTAGGGCGTCGCGGA+GGG + chr1.2:20805543-20805562 None:intergenic 70.0%
!! CAACGGCTAGGGCGTCGCGG+AGG + chr1.2:20805544-20805563 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 20805329 20806408 20805329 ID=MS.gene067185
chr1.2 mRNA 20805329 20806408 20805329 ID=MS.gene067185.t1;Parent=MS.gene067185
chr1.2 exon 20805329 20806408 20805329 ID=MS.gene067185.t1.exon1;Parent=MS.gene067185.t1
chr1.2 CDS 20805329 20806408 20805329 ID=cds.MS.gene067185.t1;Parent=MS.gene067185.t1
Gene Sequence

>MS.gene067185

ATGTGCCCTTATGTGAAGAACAATGGCTTAGGTCAACCCCTCTCAAAAACATCATGGTACACAACACACCAATTCTTAGCAGAAATGATTTTCCATGCTAGGTTAGAAAATCACGTGTGTCGCACGAGGGATCCAAATCAAGCAATTTTATTCTACGTACCATTCTACGGTGGACTACACGCTTCAAGCATGTTCCGCGAGGCGAATCACACCCTCCGCGACGCCCTAGCCGTTGATCTAATCGATCACGTACAAAGTCTACCTTGGTGGAATCGTCACAATGGTAAGGATCATTTTATTTCTCTGGGAAGGACCGCATGGGATTTCATGCGGTCCTCAAGTGGGTCCGATTTTGGAGCCAACATATTATTAAACCTACCACCTGTCAAAAACATGTCGGTGCTAACAGTTGAACGACAACCTTGGGAAGGTTATAATCAAAACGGCATACCTTACCCGTCGTATTTTCATCCAAAAACAAAAGAAGAAATGCTGACGTGGCAGAATAAAATGCGACAAAACGACAGGCCGTTTTTGTTTTCATTTATTGGTGGTAAAAGAAAAGGGTTAGGAAAAGCAAAGATTCGTGATGAGTTGTTTAAACAATGTAATGAGTCATCTCTTTGCAAGTTGGTTGATTGTGGGGGTGGGAATAGTAAATGCCATCAACCAATGGAAGTGCTTAGTGTTATGATGGAGTCACGTTTTTGTCTTCAAGCACCAGGTGATTCTTTTACTAGAAGGTCAACTTTTGACTCTATACTTGCTGGTTGTATACCTGTATTTTTCTCTCCACATACAGCGTATACGCAATACCATTGGTATTTGCCAGATGAGAAAAATACGTATTCGGTTTATATTGAAGAGGGGGGTGTAGGAAAGAAGAGTAATATGATTGAGGAGGTGTTAATGGGAATTAAGGAGGTGGAAGTTGAAAAAATGCGTGAAGTTGTGATTGGTTTGATCCCTAGGGTTAGTTATGCGCACCCGAATGGAAGTGATGTTGGGTTTAGGGATGCTGTTGATGTTGCACTTCAAGGAATTTCTAGGCTTTTGTTCGAGGAAACATTGAGATTGTAG
Protein sequence

>MS.gene067185.t1

MCPYVKNNGLGQPLSKTSWYTTHQFLAEMIFHARLENHVCRTRDPNQAILFYVPFYGGLHASSMFREANHTLRDALAVDLIDHVQSLPWWNRHNGKDHFISLGRTAWDFMRSSSGSDFGANILLNLPPVKNMSVLTVERQPWEGYNQNGIPYPSYFHPKTKEEMLTWQNKMRQNDRPFLFSFIGGKRKGLGKAKIRDELFKQCNESSLCKLVDCGGGNSKCHQPMEVLSVMMESRFCLQAPGDSFTRRSTFDSILAGCIPVFFSPHTAYTQYHWYLPDEKNTYSVYIEEGGVGKKSNMIEEVLMGIKEVEVEKMREVVIGLIPRVSYAHPNGSDVGFRDAVDVALQGISRLLFEETLRL