AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041562

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041562.t1 MTR_4g119810 98.315 356 6 0 1 356 100 455 0.0 732
MS.gene041562.t1 MTR_7g098650 40.698 344 184 9 2 345 143 466 2.65e-72 234
MS.gene041562.t1 MTR_3g084400 38.968 349 188 9 1 347 133 458 3.69e-70 227
MS.gene041562.t1 MTR_1g069460 39.826 344 187 9 2 345 218 541 6.27e-70 230
MS.gene041562.t1 MTR_5g055350 39.316 351 180 10 2 345 118 442 1.16e-68 222
MS.gene041562.t1 MTR_1g102430 36.207 348 201 6 3 350 168 494 1.69e-67 221
MS.gene041562.t1 MTR_4g129930 38.109 349 191 8 2 347 137 463 2.44e-66 217
MS.gene041562.t1 MTR_5g095940 36.034 358 203 7 2 354 160 496 1.96e-64 213
MS.gene041562.t1 MTR_5g010370 32.659 346 209 8 2 345 219 542 9.06e-60 201
MS.gene041562.t1 MTR_5g010350 34.375 352 206 9 2 351 195 523 2.49e-58 197
MS.gene041562.t1 MTR_3g007840 34.270 356 185 7 2 352 88 399 6.84e-58 193
MS.gene041562.t1 MTR_1g035730 34.593 344 199 9 1 340 128 449 4.44e-55 187
MS.gene041562.t1 MTR_5g095950 29.775 356 193 10 2 352 133 436 3.92e-40 148
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041562.t1 AT4G22580 69.341 349 99 2 1 349 95 435 6.58e-178 501
MS.gene041562.t1 AT2G29040 40.282 355 189 8 2 351 360 696 1.77e-77 252
MS.gene041562.t1 AT4G13990 40.462 346 184 7 1 345 160 484 2.87e-76 244
MS.gene041562.t1 AT4G13990 40.462 346 184 7 1 345 160 484 2.87e-76 244
MS.gene041562.t1 AT2G32750 37.391 345 194 9 1 345 154 476 1.98e-71 231
MS.gene041562.t1 AT2G32750 37.391 345 194 9 1 345 152 474 2.62e-71 231
MS.gene041562.t1 AT5G62220 37.356 348 197 6 1 348 184 510 1.09e-70 229
MS.gene041562.t1 AT2G31990 38.571 350 192 9 1 345 137 468 1.57e-69 225
MS.gene041562.t1 AT2G31990 38.571 350 192 9 1 345 145 476 1.99e-69 225
MS.gene041562.t1 AT2G31990 38.571 350 192 9 1 345 183 514 5.21e-69 225
MS.gene041562.t1 AT2G20370 38.857 350 193 10 2 351 215 543 5.64e-69 228
MS.gene041562.t1 AT2G32740 35.159 347 201 10 1 345 136 460 1.11e-62 207
MS.gene041562.t1 AT5G41250 33.815 346 202 9 2 345 236 556 8.87e-61 204
MS.gene041562.t1 AT1G63450 33.913 345 205 7 2 345 338 660 1.22e-57 198
MS.gene041562.t1 AT1G68470 31.728 353 210 10 1 349 126 451 2.93e-54 185

Find 85 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATACTCCGCCGGATATT+TGG 0.193332 8.2:+10815004 None:intergenic
ATTGGTTTCATAAACCTAAT+TGG 0.213187 8.2:+10814872 None:intergenic
GAATGACGGTTCCATATTTC+AGG 0.213906 8.2:+10815319 None:intergenic
GATTCTCTCCGTTATCTTTA+CGG 0.217974 8.2:-10815409 MS.gene041562:CDS
GAGAATGAGGGAGAAAGTTT+TGG 0.240822 8.2:-10814603 MS.gene041562:CDS
AAGAAAATCACCCTGAAATA+TGG 0.260817 8.2:-10815330 MS.gene041562:CDS
TGGATAATGATCCTCATCTT+TGG 0.279722 8.2:-10815240 MS.gene041562:CDS
GGATAATGATCCTCATCTTT+GGG 0.312571 8.2:-10815239 MS.gene041562:CDS
TGATTCCTGGAGTTGTTTAT+AGG 0.323772 8.2:-10814577 MS.gene041562:CDS
GCAGTATTCGTGGCATTTAC+CGG 0.328562 8.2:-10814732 MS.gene041562:CDS
TAGGCTTCAAGAACTTGATT+TGG 0.343749 8.2:-10814471 MS.gene041562:CDS
GAAACTGTTGATTGTTCTAA+TGG 0.345989 8.2:-10814911 MS.gene041562:CDS
TGTTCACTGGAGTTATATTC+AGG 0.365262 8.2:+10815385 None:intergenic
AATGTGAATGGGAATTCATT+TGG 0.374128 8.2:-10814950 MS.gene041562:CDS
TTGGGATTTCTCTCAGCCTT+TGG 0.379568 8.2:-10815260 MS.gene041562:CDS
TTGTTATGGCCCGACCCGCT+TGG 0.380292 8.2:-10815279 MS.gene041562:CDS
TGAAATATGGAACCGTCATT+CGG 0.384570 8.2:-10815317 MS.gene041562:CDS
TGTTATGGCCCGACCCGCTT+GGG 0.405707 8.2:-10815278 MS.gene041562:CDS
TTTGTGAGCATGATCCAATT+AGG 0.409212 8.2:-10814886 MS.gene041562:CDS
AGAGAAATCCCAAGCGGGTC+GGG 0.410850 8.2:+10815270 None:intergenic
ATCTAGCGTTGTTGGATTCG+TGG 0.415701 8.2:-10815099 MS.gene041562:CDS
TAATGTAACCGCGTTAACTT+TGG 0.420643 8.2:-10815185 MS.gene041562:CDS
TTTAACAATCGACGGTACTT+TGG 0.421402 8.2:-10814507 MS.gene041562:CDS
TTTCTGCTACGCCAAATATC+CGG 0.426952 8.2:-10815015 MS.gene041562:CDS
GAAATATGGAACCGTCATTC+GGG 0.432157 8.2:-10815316 MS.gene041562:CDS
GGATGAAACGACGTTGGATA+AGG 0.439139 8.2:+10815127 None:intergenic
TCCACCGAATCTAGCGTTGT+TGG 0.444512 8.2:-10815107 MS.gene041562:CDS
TAGGTTTATGAAACCAATGT+TGG 0.446642 8.2:-10814867 MS.gene041562:CDS
CTTTGGATAAGATTCGATCT+AGG 0.452162 8.2:-10814490 MS.gene041562:CDS
TGGAATCTCGTGCTTGGCCG+TGG 0.453321 8.2:-10815165 MS.gene041562:CDS
AAGAGCAAGAGAAGATCTCT+TGG 0.457230 8.2:+10815057 None:intergenic
AGGAAGCATAATAGTTCTCC+TGG 0.459426 8.2:-10814557 MS.gene041562:CDS
TGCAAGAATCGCGTCAAAAG+TGG 0.464262 8.2:+10814796 None:intergenic
AACAATAGCAGTAATGTGAA+TGG 0.464376 8.2:-10814962 MS.gene041562:CDS
GAATCCAACAACGCTAGATT+CGG 0.468029 8.2:+10815103 None:intergenic
CTGCTAAATCGCAGTATTCG+TGG 0.470634 8.2:-10814742 MS.gene041562:CDS
TTGAAAACAACATCCTCCTT+AGG 0.471381 8.2:+10814677 None:intergenic
GAATCAAAGGCAGCGTAGTA+AGG 0.474977 8.2:+10815427 None:intergenic
GTTAGAATATCCATGCTTAA+CGG 0.477590 8.2:-10815482 MS.gene041562:CDS
TCCTGGTTTGAGAAATAAGA+AGG 0.481589 8.2:-10814540 MS.gene041562:CDS
GAATACCTAGAGCTAGGGTT+AGG 0.482401 8.2:-10814625 MS.gene041562:CDS
TAACTTTGGAATCTCGTGCT+TGG 0.483729 8.2:-10815171 MS.gene041562:CDS
AAACTATCAAATTCAATCTC+CGG 0.484033 8.2:+10814713 None:intergenic
CAGAAATTTGCACCCAACAT+TGG 0.489289 8.2:+10814854 None:intergenic
AGGTTTATGAAACCAATGTT+GGG 0.491816 8.2:-10814866 MS.gene041562:CDS
ATGAACACCGTGTTGTTCAC+TGG 0.496549 8.2:+10815372 None:intergenic
ACAATAGCAGTAATGTGAAT+GGG 0.507436 8.2:-10814961 MS.gene041562:CDS
GAGCTAGGGTTAGGAGAATG+AGG 0.508653 8.2:-10814616 MS.gene041562:CDS
TATCCGGCGGAGTATAAGAA+TGG 0.511989 8.2:-10814999 MS.gene041562:CDS
TCCTTCTTATTTCTCAAACC+AGG 0.512916 8.2:+10814539 None:intergenic
TGCTTCCTATAAACAACTCC+AGG 0.522766 8.2:+10814572 None:intergenic
GCATTTGATTTAACAATCGA+CGG 0.546377 8.2:-10814515 MS.gene041562:CDS
ATTCAGGACCGTAAAGATAA+CGG 0.546502 8.2:+10815401 None:intergenic
AATGACGGTTCCATATTTCA+GGG 0.548354 8.2:+10815320 None:intergenic
AGCATGGATATTCTAACATA+CGG 0.550288 8.2:+10815488 None:intergenic
TGCAGAGAATACCTAGAGCT+AGG 0.553397 8.2:-10814631 MS.gene041562:CDS
TTCTGTTACTATACCTAAGG+AGG 0.554561 8.2:-10814690 MS.gene041562:CDS
ATTCCATTCTTATACTCCGC+CGG 0.557044 8.2:+10814996 None:intergenic
TTAGGATCTTCCGTTAAGCA+TGG 0.563213 8.2:+10815472 None:intergenic
GATAATGATCCTCATCTTTG+GGG 0.563491 8.2:-10815238 MS.gene041562:CDS
ATTCTCCTAACCCTAGCTCT+AGG 0.569970 8.2:+10814620 None:intergenic
AGGAAGATAAACTGCGTTAG+CGG 0.574038 8.2:+10815447 None:intergenic
AATTTCTGTTTACAACCACC+AGG 0.574716 8.2:-10814839 MS.gene041562:CDS
AAGATAACGGAGAGAATCAA+AGG 0.575689 8.2:+10815414 None:intergenic
TCCAACAACGCTAGATTCGG+TGG 0.582112 8.2:+10815106 None:intergenic
GCAGAGAATACCTAGAGCTA+GGG 0.583042 8.2:-10814630 MS.gene041562:CDS
GAGAGAAATCCCAAGCGGGT+CGG 0.590735 8.2:+10815269 None:intergenic
GGCTGAGAGAAATCCCAAGC+GGG 0.599255 8.2:+10815265 None:intergenic
ATGGAAAATGAGTTCAAGCA+TGG 0.601996 8.2:+10815513 None:intergenic
TCAAAAGTGGATTTACGCGT+AGG 0.603942 8.2:+10814809 None:intergenic
AACGAAGTTCCCCAAAGATG+AGG 0.606107 8.2:+10815229 None:intergenic
AATGATCATGACCCGAATGA+CGG 0.613212 8.2:+10815305 None:intergenic
AGCTAGGGTTAGGAGAATGA+GGG 0.619880 8.2:-10814615 MS.gene041562:CDS
TTCGGTGGATGAAACGACGT+TGG 0.620909 8.2:+10815121 None:intergenic
GGAACAGCATGTTCTTGCCA+CGG 0.628694 8.2:+10815148 None:intergenic
GATATTCTAACATACGGCGA+TGG 0.630625 8.2:+10815494 None:intergenic
CGCGTAGGAGTATCCCCTGG+TGG 0.639296 8.2:+10814824 None:intergenic
AGATGAGGATCATTATCCAA+AGG 0.639572 8.2:+10815244 None:intergenic
TTTCTGTTTACAACCACCAG+GGG 0.640332 8.2:-10814837 MS.gene041562:CDS
CTGCTACGCCAAATATCCGG+CGG 0.662754 8.2:-10815012 MS.gene041562:CDS
TTACGCGTAGGAGTATCCCC+TGG 0.680611 8.2:+10814821 None:intergenic
ATTTCTGTTTACAACCACCA+GGG 0.682776 8.2:-10814838 MS.gene041562:CDS
ACGAGATTCCAAAGTTAACG+CGG 0.729351 8.2:+10815177 None:intergenic
TATAACTCCAGTGAACAACA+CGG 0.729772 8.2:-10815379 MS.gene041562:CDS
AGGCTGAGAGAAATCCCAAG+CGG 0.735314 8.2:+10815264 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAACTATCAAATTCAATCTC+CGG + chr8.2:10815264-10815283 None:intergenic 25.0%
!! ATTGGTTTCATAAACCTAAT+TGG + chr8.2:10815105-10815124 None:intergenic 25.0%
!! TCATGATCATTTTCTTGTTA+TGG - chr8.2:10814681-10814700 MS.gene041562:CDS 25.0%
!! TTTTTCTGTTACTATACCTA+AGG - chr8.2:10815281-10815300 MS.gene041562:CDS 25.0%
AACAATAGCAGTAATGTGAA+TGG - chr8.2:10815012-10815031 MS.gene041562:CDS 30.0%
AAGAAAATCACCCTGAAATA+TGG - chr8.2:10814644-10814663 MS.gene041562:CDS 30.0%
AATGTGAATGGGAATTCATT+TGG - chr8.2:10815024-10815043 MS.gene041562:CDS 30.0%
ACAATAGCAGTAATGTGAAT+GGG - chr8.2:10815013-10815032 MS.gene041562:CDS 30.0%
AGCATGGATATTCTAACATA+CGG + chr8.2:10814489-10814508 None:intergenic 30.0%
AGGTTTATGAAACCAATGTT+GGG - chr8.2:10815108-10815127 MS.gene041562:CDS 30.0%
GTTAGAATATCCATGCTTAA+CGG - chr8.2:10814492-10814511 MS.gene041562:CDS 30.0%
TAGGTTTATGAAACCAATGT+TGG - chr8.2:10815107-10815126 MS.gene041562:CDS 30.0%
! GAAACTGTTGATTGTTCTAA+TGG - chr8.2:10815063-10815082 MS.gene041562:CDS 30.0%
! GCATTTGATTTAACAATCGA+CGG - chr8.2:10815459-10815478 MS.gene041562:CDS 30.0%
! TATTTCAGGGTGATTTTCTT+TGG + chr8.2:10814644-10814663 None:intergenic 30.0%
AATGACGGTTCCATATTTCA+GGG + chr8.2:10814657-10814676 None:intergenic 35.0%
AATTTCTGTTTACAACCACC+AGG - chr8.2:10815135-10815154 MS.gene041562:CDS 35.0%
AGATGAGGATCATTATCCAA+AGG + chr8.2:10814733-10814752 None:intergenic 35.0%
ATTCAGGACCGTAAAGATAA+CGG + chr8.2:10814576-10814595 None:intergenic 35.0%
ATTTCTGTTTACAACCACCA+GGG - chr8.2:10815136-10815155 MS.gene041562:CDS 35.0%
CTTTGGATAAGATTCGATCT+AGG - chr8.2:10815484-10815503 MS.gene041562:CDS 35.0%
GATAAATCCTCGAAAAACAC+AGG + chr8.2:10815213-10815232 None:intergenic 35.0%
GATAATGATCCTCATCTTTG+GGG - chr8.2:10814736-10814755 MS.gene041562:CDS 35.0%
GATTCTCTCCGTTATCTTTA+CGG - chr8.2:10814565-10814584 MS.gene041562:CDS 35.0%
GCGGTTACATTAAAAAAGTG+TGG + chr8.2:10814781-10814800 None:intergenic 35.0%
GGATAATGATCCTCATCTTT+GGG - chr8.2:10814735-10814754 MS.gene041562:CDS 35.0%
TAATGTAACCGCGTTAACTT+TGG - chr8.2:10814789-10814808 MS.gene041562:CDS 35.0%
TAGGCTTCAAGAACTTGATT+TGG - chr8.2:10815503-10815522 MS.gene041562:CDS 35.0%
TATAACTCCAGTGAACAACA+CGG - chr8.2:10814595-10814614 MS.gene041562:CDS 35.0%
TGAAATATGGAACCGTCATT+CGG - chr8.2:10814657-10814676 MS.gene041562:CDS 35.0%
TGATTCCTGGAGTTGTTTAT+AGG - chr8.2:10815397-10815416 MS.gene041562:CDS 35.0%
TGGATAATGATCCTCATCTT+TGG - chr8.2:10814734-10814753 MS.gene041562:CDS 35.0%
TGTTCACTGGAGTTATATTC+AGG + chr8.2:10814592-10814611 None:intergenic 35.0%
TTCTGTTACTATACCTAAGG+AGG - chr8.2:10815284-10815303 MS.gene041562:CDS 35.0%
TTGAAAACAACATCCTCCTT+AGG + chr8.2:10815300-10815319 None:intergenic 35.0%
TTTAACAATCGACGGTACTT+TGG - chr8.2:10815467-10815486 MS.gene041562:CDS 35.0%
TTTGTGAGCATGATCCAATT+AGG - chr8.2:10815088-10815107 MS.gene041562:CDS 35.0%
! TCCTGGTTTGAGAAATAAGA+AGG - chr8.2:10815434-10815453 MS.gene041562:CDS 35.0%
! TCCTTCTTATTTCTCAAACC+AGG + chr8.2:10815438-10815457 None:intergenic 35.0%
! TTGTATACCTGTGTTTTTCG+AGG - chr8.2:10815203-10815222 MS.gene041562:CDS 35.0%
!! AAGATAACGGAGAGAATCAA+AGG + chr8.2:10814563-10814582 None:intergenic 35.0%
!!! AAAGTTTTGGAGTTGATTCC+TGG - chr8.2:10815384-10815403 MS.gene041562:CDS 35.0%
!!! AAGGAGGATGTTGTTTTCAA+GGG - chr8.2:10815300-10815319 MS.gene041562:CDS 35.0%
!!! TAAGGAGGATGTTGTTTTCA+AGG - chr8.2:10815299-10815318 MS.gene041562:CDS 35.0%
AAGAGCAAGAGAAGATCTCT+TGG + chr8.2:10814920-10814939 None:intergenic 40.0%
AATGATCATGACCCGAATGA+CGG + chr8.2:10814672-10814691 None:intergenic 40.0%
ACGAGATTCCAAAGTTAACG+CGG + chr8.2:10814800-10814819 None:intergenic 40.0%
AGGAAGATAAACTGCGTTAG+CGG + chr8.2:10814530-10814549 None:intergenic 40.0%
ATTCCATTCTTATACTCCGC+CGG + chr8.2:10814981-10815000 None:intergenic 40.0%
CAGAAATTTGCACCCAACAT+TGG + chr8.2:10815123-10815142 None:intergenic 40.0%
GAAATATGGAACCGTCATTC+GGG - chr8.2:10814658-10814677 MS.gene041562:CDS 40.0%
GAATCCAACAACGCTAGATT+CGG + chr8.2:10814874-10814893 None:intergenic 40.0%
GAATGACGGTTCCATATTTC+AGG + chr8.2:10814658-10814677 None:intergenic 40.0%
GATATTCTAACATACGGCGA+TGG + chr8.2:10814483-10814502 None:intergenic 40.0%
TGCTTCCTATAAACAACTCC+AGG + chr8.2:10815405-10815424 None:intergenic 40.0%
TTAGGATCTTCCGTTAAGCA+TGG + chr8.2:10814505-10814524 None:intergenic 40.0%
TTTCTGCTACGCCAAATATC+CGG - chr8.2:10814959-10814978 MS.gene041562:CDS 40.0%
TTTCTGTTTACAACCACCAG+GGG - chr8.2:10815137-10815156 MS.gene041562:CDS 40.0%
! AGGAAGCATAATAGTTCTCC+TGG - chr8.2:10815417-10815436 MS.gene041562:CDS 40.0%
! GAGAATGAGGGAGAAAGTTT+TGG - chr8.2:10815371-10815390 MS.gene041562:CDS 40.0%
! TAAACTGCGTTAGCGGTTTT+AGG + chr8.2:10814523-10814542 None:intergenic 40.0%
! TCAAAAGTGGATTTACGCGT+AGG + chr8.2:10815168-10815187 None:intergenic 40.0%
! TCTTCTCTTGCTCTTTTTGC+AGG - chr8.2:10814925-10814944 MS.gene041562:CDS 40.0%
!! TAACTTTGGAATCTCGTGCT+TGG - chr8.2:10814803-10814822 MS.gene041562:CDS 40.0%
AACGAAGTTCCCCAAAGATG+AGG + chr8.2:10814748-10814767 None:intergenic 45.0%
AGCTAGGGTTAGGAGAATGA+GGG - chr8.2:10815359-10815378 MS.gene041562:CDS 45.0%
ATCTAGCGTTGTTGGATTCG+TGG - chr8.2:10814875-10814894 MS.gene041562:CDS 45.0%
CTGCTAAATCGCAGTATTCG+TGG - chr8.2:10815232-10815251 MS.gene041562:CDS 45.0%
CTTATACTCCGCCGGATATT+TGG + chr8.2:10814973-10814992 None:intergenic 45.0%
GAATACCTAGAGCTAGGGTT+AGG - chr8.2:10815349-10815368 MS.gene041562:CDS 45.0%
GAATCAAAGGCAGCGTAGTA+AGG + chr8.2:10814550-10814569 None:intergenic 45.0%
GCAGAGAATACCTAGAGCTA+GGG - chr8.2:10815344-10815363 MS.gene041562:CDS 45.0%
GCAGTATTCGTGGCATTTAC+CGG - chr8.2:10815242-10815261 MS.gene041562:CDS 45.0%
GGATGAAACGACGTTGGATA+AGG + chr8.2:10814850-10814869 None:intergenic 45.0%
TATCCGGCGGAGTATAAGAA+TGG - chr8.2:10814975-10814994 MS.gene041562:CDS 45.0%
TGCAAGAATCGCGTCAAAAG+TGG + chr8.2:10815181-10815200 None:intergenic 45.0%
TGCAGAGAATACCTAGAGCT+AGG - chr8.2:10815343-10815362 MS.gene041562:CDS 45.0%
TTGGGATTTCTCTCAGCCTT+TGG - chr8.2:10814714-10814733 MS.gene041562:CDS 45.0%
! ACTTTTGACGCGATTCTTGC+AGG - chr8.2:10815180-10815199 MS.gene041562:CDS 45.0%
! ATGAACACCGTGTTGTTCAC+TGG + chr8.2:10814605-10814624 None:intergenic 45.0%
! ATTCTCCTAACCCTAGCTCT+AGG + chr8.2:10815357-10815376 None:intergenic 45.0%
! TCTCTTGCTCTTTTTGCAGG+TGG - chr8.2:10814928-10814947 MS.gene041562:CDS 45.0%
AGGCTGAGAGAAATCCCAAG+CGG + chr8.2:10814713-10814732 None:intergenic 50.0%
GAGCTAGGGTTAGGAGAATG+AGG - chr8.2:10815358-10815377 MS.gene041562:CDS 50.0%
GGAACAGCATGTTCTTGCCA+CGG + chr8.2:10814829-10814848 None:intergenic 50.0%
TCCAACAACGCTAGATTCGG+TGG + chr8.2:10814871-10814890 None:intergenic 50.0%
TCCACCGAATCTAGCGTTGT+TGG - chr8.2:10814867-10814886 MS.gene041562:CDS 50.0%
TTCGGTGGATGAAACGACGT+TGG + chr8.2:10814856-10814875 None:intergenic 50.0%
! CTTGCTCTTTTTGCAGGTGG+TGG - chr8.2:10814931-10814950 MS.gene041562:CDS 50.0%
AGAGAAATCCCAAGCGGGTC+GGG + chr8.2:10814707-10814726 None:intergenic 55.0%
CTGCTACGCCAAATATCCGG+CGG - chr8.2:10814962-10814981 MS.gene041562:CDS 55.0%
GAGAGAAATCCCAAGCGGGT+CGG + chr8.2:10814708-10814727 None:intergenic 55.0%
GGCTGAGAGAAATCCCAAGC+GGG + chr8.2:10814712-10814731 None:intergenic 55.0%
!! GCTCTTTTTGCAGGTGGTGG+TGG - chr8.2:10814934-10814953 MS.gene041562:CDS 55.0%
!! TTACGCGTAGGAGTATCCCC+TGG + chr8.2:10815156-10815175 None:intergenic 55.0%
TGGAATCTCGTGCTTGGCCG+TGG - chr8.2:10814809-10814828 MS.gene041562:CDS 60.0%
TGTTATGGCCCGACCCGCTT+GGG - chr8.2:10814696-10814715 MS.gene041562:CDS 60.0%
TTGTTATGGCCCGACCCGCT+TGG - chr8.2:10814695-10814714 MS.gene041562:CDS 60.0%
!! CGCGTAGGAGTATCCCCTGG+TGG + chr8.2:10815153-10815172 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 10814463 10815533 10814463 ID=MS.gene041562
chr8.2 mRNA 10814463 10815533 10814463 ID=MS.gene041562.t1;Parent=MS.gene041562
chr8.2 exon 10814463 10815533 10814463 ID=MS.gene041562.t1.exon1;Parent=MS.gene041562.t1
chr8.2 CDS 10814463 10815533 10814463 ID=cds.MS.gene041562.t1;Parent=MS.gene041562.t1
Gene Sequence

>MS.gene041562

ATGCTTGAACTCATTTTCCATCGCCGTATGTTAGAATATCCATGCTTAACGGAAGATCCTAAAACCGCTAACGCAGTTTATCTTCCTTACTACGCTGCCTTTGATTCTCTCCGTTATCTTTACGGTCCTGAATATAACTCCAGTGAACAACACGGTGTTCATCTTTTTCATTTTCTGACCAAAGAAAATCACCCTGAAATATGGAACCGTCATTCGGGTCATGATCATTTTCTTGTTATGGCCCGACCCGCTTGGGATTTCTCTCAGCCTTTGGATAATGATCCTCATCTTTGGGGAACTTCGTTTCTTGAATTACCACACTTTTTTAATGTAACCGCGTTAACTTTGGAATCTCGTGCTTGGCCGTGGCAAGAACATGCTGTTCCTTATCCAACGTCGTTTCATCCACCGAATCTAGCGTTGTTGGATTCGTGGATTCAGCGTGTTCGTCGTTCCAAGAGATCTTCTCTTGCTCTTTTTGCAGGTGGTGGTGGTTTTTCTGCTACGCCAAATATCCGGCGGAGTATAAGAATGGAATGTGATAATGATAACAATAGCAGTAATGTGAATGGGAATTCATTTGGTTATGAAAAGCTTTGTGAAACTGTTGATTGTTCTAATGGTGTTTGTGAGCATGATCCAATTAGGTTTATGAAACCAATGTTGGGTGCAAATTTCTGTTTACAACCACCAGGGGATACTCCTACGCGTAAATCCACTTTTGACGCGATTCTTGCAGGTTGTATACCTGTGTTTTTCGAGGATTTATCTGCTAAATCGCAGTATTCGTGGCATTTACCGGAGATTGAATTTGATAGTTTTTCTGTTACTATACCTAAGGAGGATGTTGTTTTCAAGGGATTGAAGATTTTTGATGTGTTGCAGAGAATACCTAGAGCTAGGGTTAGGAGAATGAGGGAGAAAGTTTTGGAGTTGATTCCTGGAGTTGTTTATAGGAAGCATAATAGTTCTCCTGGTTTGAGAAATAAGAAGGATGCATTTGATTTAACAATCGACGGTACTTTGGATAAGATTCGATCTAGGCTTCAAGAACTTGATTTGGTTTTGTAA
Protein sequence

>MS.gene041562.t1

MLELIFHRRMLEYPCLTEDPKTANAVYLPYYAAFDSLRYLYGPEYNSSEQHGVHLFHFLTKENHPEIWNRHSGHDHFLVMARPAWDFSQPLDNDPHLWGTSFLELPHFFNVTALTLESRAWPWQEHAVPYPTSFHPPNLALLDSWIQRVRRSKRSSLALFAGGGGFSATPNIRRSIRMECDNDNNSSNVNGNSFGYEKLCETVDCSNGVCEHDPIRFMKPMLGANFCLQPPGDTPTRKSTFDAILAGCIPVFFEDLSAKSQYSWHLPEIEFDSFSVTIPKEDVVFKGLKIFDVLQRIPRARVRRMREKVLELIPGVVYRKHNSSPGLRNKKDAFDLTIDGTLDKIRSRLQELDLVL