Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069088.t1 | XP_003611976.1 | 95.5 | 470 | 15 | 1 | 1 | 464 | 1 | 470 | 9.60E-244 | 852.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069088.t1 | Q8L7A0 | 62.4 | 466 | 159 | 5 | 12 | 462 | 8 | 472 | 1.4e-155 | 550.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069088.t1 | G7ZW19 | 95.5 | 470 | 15 | 1 | 1 | 464 | 1 | 470 | 6.9e-244 | 852.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050438 | MS.gene069088 | 0.802417 | 5.67E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene069088 | 0.838871 | 2.22E-57 | -1.69E-46 |
| MS.gene05288 | MS.gene069088 | 0.828113 | 1.08E-54 | -1.69E-46 |
| MS.gene053074 | MS.gene069088 | 0.832309 | 1.02E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene069088 | 0.803631 | 3.18E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene069088 | 0.805812 | 1.11E-49 | -1.69E-46 |
| MS.gene054185 | MS.gene069088 | 0.809465 | 1.87E-50 | -1.69E-46 |
| MS.gene054713 | MS.gene069088 | 0.887121 | 1.88E-72 | -1.69E-46 |
| MS.gene055860 | MS.gene069088 | 0.828683 | 7.85E-55 | -1.69E-46 |
| MS.gene058042 | MS.gene069088 | 0.848483 | 5.96E-60 | -1.69E-46 |
| MS.gene058168 | MS.gene069088 | 0.820723 | 5.90E-53 | -1.69E-46 |
| MS.gene059609 | MS.gene069088 | 0.80334 | 3.65E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene069088 | 0.808263 | 3.38E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069088.t1 | MTR_5g019950 | 95.532 | 470 | 15 | 1 | 1 | 464 | 1 | 470 | 0.0 | 902 |
| MS.gene069088.t1 | MTR_8g077830 | 72.458 | 472 | 110 | 4 | 1 | 464 | 8 | 467 | 0.0 | 629 |
| MS.gene069088.t1 | MTR_3g109950 | 63.755 | 458 | 157 | 5 | 12 | 462 | 11 | 466 | 0.0 | 552 |
| MS.gene069088.t1 | MTR_3g109950 | 63.218 | 435 | 151 | 5 | 12 | 439 | 11 | 443 | 1.07e-179 | 511 |
| MS.gene069088.t1 | MTR_3g109950 | 61.697 | 389 | 140 | 5 | 12 | 393 | 11 | 397 | 6.96e-154 | 444 |
| MS.gene069088.t1 | MTR_8g088080 | 60.682 | 440 | 154 | 4 | 34 | 463 | 44 | 474 | 2.01e-153 | 444 |
| MS.gene069088.t1 | MTR_8g088070 | 59.028 | 432 | 156 | 4 | 41 | 462 | 48 | 468 | 1.69e-149 | 434 |
| MS.gene069088.t1 | MTR_1g026910 | 50.433 | 462 | 205 | 6 | 11 | 462 | 8 | 455 | 2.18e-143 | 418 |
| MS.gene069088.t1 | MTR_1g026910 | 49.886 | 439 | 196 | 6 | 11 | 439 | 8 | 432 | 9.56e-131 | 385 |
| MS.gene069088.t1 | MTR_7g103300 | 52.542 | 413 | 182 | 4 | 64 | 464 | 51 | 461 | 6.84e-127 | 376 |
| MS.gene069088.t1 | MTR_7g103300 | 52.696 | 408 | 179 | 4 | 69 | 464 | 8 | 413 | 2.50e-124 | 368 |
| MS.gene069088.t1 | MTR_7g103300 | 53.093 | 388 | 168 | 4 | 64 | 439 | 51 | 436 | 7.41e-117 | 350 |
| MS.gene069088.t1 | MTR_7g103300 | 51.475 | 373 | 167 | 4 | 104 | 464 | 1 | 371 | 1.95e-114 | 341 |
| MS.gene069088.t1 | MTR_7g103300 | 52.770 | 343 | 148 | 4 | 64 | 394 | 51 | 391 | 1.54e-99 | 304 |
| MS.gene069088.t1 | MTR_7g103300 | 51.613 | 310 | 136 | 4 | 64 | 361 | 51 | 358 | 1.29e-81 | 256 |
| MS.gene069088.t1 | MTR_1g061710 | 50.579 | 259 | 122 | 1 | 61 | 313 | 49 | 307 | 3.79e-76 | 248 |
| MS.gene069088.t1 | MTR_1g061710 | 54.369 | 103 | 47 | 0 | 361 | 463 | 427 | 529 | 5.82e-29 | 119 |
| MS.gene069088.t1 | MTR_5g019970 | 97.143 | 105 | 3 | 0 | 360 | 464 | 6 | 110 | 4.08e-66 | 207 |
| MS.gene069088.t1 | MTR_2g010740 | 28.351 | 388 | 244 | 9 | 101 | 462 | 87 | 466 | 1.57e-39 | 148 |
| MS.gene069088.t1 | MTR_2g010740 | 27.458 | 295 | 180 | 9 | 101 | 369 | 87 | 373 | 2.40e-25 | 107 |
| MS.gene069088.t1 | MTR_3g110012 | 47.458 | 118 | 40 | 1 | 297 | 392 | 27 | 144 | 4.82e-20 | 87.0 |
| MS.gene069088.t1 | MTR_3g109980 | 47.458 | 118 | 40 | 1 | 297 | 392 | 27 | 144 | 4.82e-20 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069088.t1 | AT2G25737 | 62.179 | 468 | 161 | 5 | 10 | 462 | 6 | 472 | 0.0 | 543 |
| MS.gene069088.t1 | AT2G25737 | 57.766 | 367 | 139 | 5 | 10 | 361 | 6 | 371 | 2.79e-132 | 387 |
| MS.gene069088.t1 | AT2G36630 | 50.835 | 419 | 192 | 3 | 58 | 464 | 42 | 458 | 3.52e-125 | 372 |
| MS.gene069088.t1 | AT1G11540 | 33.911 | 404 | 240 | 6 | 77 | 462 | 56 | 450 | 8.10e-49 | 173 |
| MS.gene069088.t1 | AT1G11540 | 33.511 | 376 | 223 | 6 | 105 | 462 | 1 | 367 | 1.42e-48 | 171 |
| MS.gene069088.t1 | AT1G61740 | 29.087 | 416 | 266 | 8 | 68 | 462 | 51 | 458 | 3.51e-42 | 155 |
| MS.gene069088.t1 | AT4G21250 | 30.788 | 419 | 245 | 7 | 69 | 462 | 51 | 449 | 3.78e-42 | 155 |
| MS.gene069088.t1 | AT4G21260 | 26.000 | 450 | 267 | 9 | 13 | 462 | 10 | 393 | 2.14e-33 | 130 |
Find 116 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGGAGGTGGCTTCATTT+TGG | 0.160113 | 5.3:+11394970 | MS.gene069088:CDS |
| CTTTGCTAAAGAACATTTAT+TGG | 0.212510 | 5.3:+11394274 | MS.gene069088:CDS |
| GAGCAGTGGTTGATTTCTTA+TGG | 0.221654 | 5.3:+11392526 | MS.gene069088:CDS |
| GATAATTGCAGGTATGATTA+TGG | 0.245947 | 5.3:+11393039 | MS.gene069088:intron |
| CCTATGCTTGCTTTGATCAT+TGG | 0.246443 | 5.3:+11392821 | MS.gene069088:CDS |
| GTTGGAAAATCATGAGTATA+TGG | 0.251481 | 5.3:+11396310 | MS.gene069088:CDS |
| TATCACTCCTTGTATATGTT+TGG | 0.262731 | 5.3:+11394304 | MS.gene069088:CDS |
| GCGGAGGAATTCCCATTTCT+AGG | 0.293862 | 5.3:-11395003 | None:intergenic |
| TGGATTCTTGGGAGCAGCTT+TGG | 0.295899 | 5.3:+11392760 | MS.gene069088:CDS |
| AGGCATAAATACATGGAAAA+AGG | 0.303982 | 5.3:+11393668 | MS.gene069088:CDS |
| ACACATGGCAACAAAATCTT+TGG | 0.304038 | 5.3:+11392377 | None:intergenic |
| TGGATCAATCGTTGGATTCT+TGG | 0.309591 | 5.3:+11392748 | MS.gene069088:CDS |
| ATCACTCCTTGTATATGTTT+GGG | 0.317232 | 5.3:+11394305 | MS.gene069088:CDS |
| TTGGATTCTTAATTTCTTGC+AGG | 0.323072 | 5.3:+11394690 | MS.gene069088:CDS |
| GGGGCCACTGTTCCTAGAAA+TGG | 0.325621 | 5.3:+11394991 | MS.gene069088:CDS |
| AAAGGAAACAATGTTGAAAA+AGG | 0.328619 | 5.3:+11393686 | MS.gene069088:CDS |
| AGCAGGAAATGAAATTTGAT+TGG | 0.335221 | 5.3:+11392714 | MS.gene069088:intron |
| GCCACTTATAGATTATGATT+TGG | 0.337334 | 5.3:+11393120 | MS.gene069088:CDS |
| TGCAGCTTCATACTTTGTTT+TGG | 0.337370 | 5.3:+11396024 | MS.gene069088:intron |
| TTACTCATCATCTTATTCAT+AGG | 0.345297 | 5.3:+11393229 | MS.gene069088:CDS |
| AGCGATCTAAATAGTAATAT+TGG | 0.354255 | 5.3:-11395698 | None:intergenic |
| AGAGAACATGATTGTGAAGT+TGG | 0.357557 | 5.3:+11396292 | MS.gene069088:CDS |
| TTCATAAGTGCAATCAGTTT+AGG | 0.367029 | 5.3:+11396148 | MS.gene069088:CDS |
| TCTTTCTCAACAAACTTTGC+CGG | 0.370188 | 5.3:-11392486 | None:intergenic |
| GGATTCTTGGGAGCAGCTTT+GGG | 0.374949 | 5.3:+11392761 | MS.gene069088:CDS |
| GTTGGAGGGTTGCTTGGTCT+AGG | 0.378397 | 5.3:+11394953 | MS.gene069088:CDS |
| GCAACCATAGCTGCATTTGC+TGG | 0.378940 | 5.3:+11396049 | MS.gene069088:CDS |
| GGTATGGTTGGAGGGTTGCT+TGG | 0.380908 | 5.3:+11394947 | MS.gene069088:CDS |
| GGATCAATCGTTGGATTCTT+GGG | 0.380940 | 5.3:+11392749 | MS.gene069088:CDS |
| TTTGATTGGAAAATTATAGT+TGG | 0.391885 | 5.3:+11392728 | MS.gene069088:CDS |
| TGTATTTCACCTGGACCCTT+TGG | 0.393240 | 5.3:-11394143 | None:intergenic |
| CAACTGTTTACTACAATATG+AGG | 0.399306 | 5.3:+11393074 | MS.gene069088:CDS |
| TTGGGAAGTGTTGGAGGTGT+AGG | 0.403654 | 5.3:+11392779 | MS.gene069088:CDS |
| ATAATTGCAGGTATGATTAT+GGG | 0.421533 | 5.3:+11393040 | MS.gene069088:intron |
| TGGTTCTTCTTCCAACTGCT+TGG | 0.423091 | 5.3:-11393802 | None:intergenic |
| AGCAGTGGTTGATTTCTTAT+GGG | 0.424588 | 5.3:+11392527 | MS.gene069088:CDS |
| AACGCACTTACACTTGGAAA+TGG | 0.426738 | 5.3:-11392867 | None:intergenic |
| ATGTGGAGTAATGGCTGGTA+TGG | 0.429546 | 5.3:+11394931 | MS.gene069088:CDS |
| AGACTTGCTCCATTGAGTAT+TGG | 0.430494 | 5.3:+11394671 | MS.gene069088:CDS |
| TCTAATTGTTCAGATTGTTA+AGG | 0.430792 | 5.3:+11394335 | MS.gene069088:CDS |
| GGAGCAGCTTTGGGAAGTGT+TGG | 0.432259 | 5.3:+11392770 | MS.gene069088:CDS |
| TTCCAGCCTATGCTGATGCT+TGG | 0.432303 | 5.3:+11393151 | MS.gene069088:CDS |
| GGGCCACTGTTCCTAGAAAT+GGG | 0.439049 | 5.3:+11394992 | MS.gene069088:CDS |
| GTAATGTCATGTTTGCTGAT+TGG | 0.440823 | 5.3:+11393194 | MS.gene069088:CDS |
| GATCGCTTCCCCGTACCTTA+CGG | 0.441861 | 5.3:+11395714 | MS.gene069088:CDS |
| ACTGTAACAGAGATAGCAAT+AGG | 0.442311 | 5.3:-11394809 | None:intergenic |
| TTCACCTGGACCCTTTGGTA+GGG | 0.442360 | 5.3:-11394138 | None:intergenic |
| GTTGATTTCTTATGGGAAAG+TGG | 0.442564 | 5.3:+11392534 | MS.gene069088:CDS |
| TTGGAAAATCATGAGTATAT+GGG | 0.442966 | 5.3:+11396311 | MS.gene069088:CDS |
| GTAATGGCTGGTATGGTTGG+AGG | 0.443896 | 5.3:+11394938 | MS.gene069088:CDS |
| GGGTTGCTTGGTCTAGGAGG+TGG | 0.445245 | 5.3:+11394959 | MS.gene069088:CDS |
| ATATTGCTATATTGTTTATG+TGG | 0.446750 | 5.3:+11394914 | MS.gene069088:CDS |
| TAAGTGGCATGTCTAGTGTT+GGG | 0.453765 | 5.3:-11393105 | None:intergenic |
| AGTCTTCATATGAACCTGTT+TGG | 0.458365 | 5.3:+11392559 | MS.gene069088:CDS |
| ATTATAGTTGGATCAATCGT+TGG | 0.461626 | 5.3:+11392740 | MS.gene069088:CDS |
| GGAAGTGTTGGAGGTGTAGG+AGG | 0.462071 | 5.3:+11392782 | MS.gene069088:CDS |
| TTTCACCTGGACCCTTTGGT+AGG | 0.464163 | 5.3:-11394139 | None:intergenic |
| GTTGGAGGTGTAGGAGGTGG+TGG | 0.466176 | 5.3:+11392788 | MS.gene069088:CDS |
| TATGAACTCACAGGCCAAAC+AGG | 0.469346 | 5.3:-11392573 | None:intergenic |
| GGAGTAATGGCTGGTATGGT+TGG | 0.469457 | 5.3:+11394935 | MS.gene069088:CDS |
| TCACCTGGACCCTTTGGTAG+GGG | 0.471023 | 5.3:-11394137 | None:intergenic |
| AACTACTTACCGTAAGGTAC+GGG | 0.471948 | 5.3:-11395723 | None:intergenic |
| AACAAGAGTGATTAAATCAA+AGG | 0.473487 | 5.3:+11394859 | MS.gene069088:CDS |
| TAATGGCTGGTATGGTTGGA+GGG | 0.480577 | 5.3:+11394939 | MS.gene069088:CDS |
| GCAGCTTTGGGAAGTGTTGG+AGG | 0.480835 | 5.3:+11392773 | MS.gene069088:CDS |
| TTTGTTGAGAAAGAAACAAA+AGG | 0.481024 | 5.3:+11392495 | MS.gene069088:CDS |
| AGTGTTGGAGGTGTAGGAGG+TGG | 0.493934 | 5.3:+11392785 | MS.gene069088:CDS |
| GGAAATGGCTGTAGAAGACT+TGG | 0.494754 | 5.3:-11392852 | None:intergenic |
| GCCAAATCATAATCTATAAG+TGG | 0.496380 | 5.3:-11393121 | None:intergenic |
| ATTAAGAATCCAATACTCAA+TGG | 0.501230 | 5.3:-11394680 | None:intergenic |
| ACAAGAGTGATTAAATCAAA+GGG | 0.507110 | 5.3:+11394860 | MS.gene069088:CDS |
| CAATAAATGTTCTTTAGCAA+AGG | 0.508448 | 5.3:-11394273 | None:intergenic |
| AACAATCTGAACAATTAGAA+AGG | 0.520405 | 5.3:-11394331 | None:intergenic |
| TTCCAAGCATCAGCATAGGC+TGG | 0.520792 | 5.3:-11393153 | None:intergenic |
| CTGATGCTTGGAATAAGTAT+TGG | 0.521464 | 5.3:+11393163 | MS.gene069088:CDS |
| AGAAGGATAATTGCAATCCT+TGG | 0.524746 | 5.3:+11396085 | MS.gene069088:CDS |
| TTGTGTATCACAGGTGGAGT+AGG | 0.524929 | 5.3:+11396266 | MS.gene069088:intron |
| ACTGATTGCACTTATGAAGA+TGG | 0.531468 | 5.3:-11396143 | None:intergenic |
| CTGGCCAGCAAATGCAGCTA+TGG | 0.531946 | 5.3:-11396053 | None:intergenic |
| ATAAGTGGCATGTCTAGTGT+TGG | 0.532797 | 5.3:-11393106 | None:intergenic |
| ACTTCATCTTGTATTTCACC+TGG | 0.537361 | 5.3:-11394152 | None:intergenic |
| AAACTACTTACCGTAAGGTA+CGG | 0.538127 | 5.3:-11395724 | None:intergenic |
| GGAGGGTTGCTTGGTCTAGG+AGG | 0.540261 | 5.3:+11394956 | MS.gene069088:CDS |
| ATATTGTTTATGTGGAGTAA+TGG | 0.540286 | 5.3:+11394922 | MS.gene069088:CDS |
| ACTCCTTGTATATGTTTGGG+TGG | 0.542450 | 5.3:+11394308 | MS.gene069088:CDS |
| GACTACAAGCCCCTACCAAA+GGG | 0.543521 | 5.3:+11394128 | MS.gene069088:CDS |
| GCAGGAAGCAGCCAAGCAGT+TGG | 0.548673 | 5.3:+11393791 | MS.gene069088:intron |
| TGCATTTGCTGGCCAGCATG+TGG | 0.549794 | 5.3:+11396060 | MS.gene069088:CDS |
| TATTCAAAGGCATAAATACA+TGG | 0.555159 | 5.3:+11393661 | MS.gene069088:CDS |
| TGGAAAATCATGAGTATATG+GGG | 0.558196 | 5.3:+11396312 | MS.gene069088:CDS |
| TGTCATGTTTGCTGATTGGA+TGG | 0.558982 | 5.3:+11393198 | MS.gene069088:CDS |
| AAGCCCCTACCAAAGGGTCC+AGG | 0.559115 | 5.3:+11394134 | MS.gene069088:CDS |
| CCAATGATCAAAGCAAGCAT+AGG | 0.560848 | 5.3:-11392821 | None:intergenic |
| AGTGATTAAATCAAAGGGAA+AGG | 0.562365 | 5.3:+11394865 | MS.gene069088:CDS |
| TTATCCTTCTCACCACATGC+TGG | 0.565982 | 5.3:-11396072 | None:intergenic |
| CAATGATCAAAGCAAGCATA+GGG | 0.568436 | 5.3:-11392820 | None:intergenic |
| GATCATGTGTATCCTTGTTG+TGG | 0.572672 | 5.3:+11392419 | MS.gene069088:CDS |
| AGGTGAAATACAAGATGAAG+TGG | 0.578510 | 5.3:+11394154 | MS.gene069088:CDS |
| TCAACAAAAGCATTATTCAA+AGG | 0.585877 | 5.3:+11393648 | MS.gene069088:CDS |
| TGTTTATGTGGAGTAATGGC+TGG | 0.586217 | 5.3:+11394926 | MS.gene069088:CDS |
| AGAAATGGGAATTCCTCCGC+AGG | 0.587719 | 5.3:+11395006 | MS.gene069088:CDS |
| AGACTACAAGCCCCTACCAA+AGG | 0.602171 | 5.3:+11394127 | MS.gene069088:CDS |
| AAAAGGATTTCTAAGAGCAG+TGG | 0.604558 | 5.3:+11392512 | MS.gene069088:CDS |
| CTGGCCAGCATGTGGTGAGA+AGG | 0.606592 | 5.3:+11396068 | MS.gene069088:CDS |
| CTTATTCCAAGCATCAGCAT+AGG | 0.609800 | 5.3:-11393157 | None:intergenic |
| CTTTGGTTACTGCAGCAACA+TGG | 0.613177 | 5.3:+11392394 | MS.gene069088:CDS |
| TAATAATTGAAGCACGACCA+AGG | 0.618977 | 5.3:-11396102 | None:intergenic |
| GAAGCTGTATGCATATACAA+AGG | 0.625248 | 5.3:+11394836 | MS.gene069088:CDS |
| AGGCCACCCAAACATATACA+AGG | 0.626916 | 5.3:-11394311 | None:intergenic |
| ATTCCCATTTCTAGGAACAG+TGG | 0.643732 | 5.3:-11394995 | None:intergenic |
| GTAATATTGGACTACTGACA+TGG | 0.648060 | 5.3:-11395685 | None:intergenic |
| GAAATGGCTGTAGAAGACTT+GGG | 0.659724 | 5.3:-11392851 | None:intergenic |
| TATGAAGAGTGTACCTGCGG+AGG | 0.676375 | 5.3:-11395019 | None:intergenic |
| TGACATTGCAGACCACAACA+AGG | 0.687899 | 5.3:-11392431 | None:intergenic |
| ACTACTTACCGTAAGGTACG+GGG | 0.702257 | 5.3:-11395722 | None:intergenic |
| ATATTGGACTACTGACATGG+AGG | 0.734752 | 5.3:-11395682 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAAAAATAAAAAA+AGG | + | chr5.3:11395910-11395929 | MS.gene069088:intron | 0.0% |
| !! | TATATAAAAAATTTAAAAAA+TGG | - | chr5.3:11394617-11394636 | None:intergenic | 0.0% |
| !! | AAAACTTTCAAAATTTATAA+AGG | + | chr5.3:11395525-11395544 | MS.gene069088:intron | 10.0% |
| !!! | TTATTATTATGCTTTTTTAT+CGG | + | chr5.3:11392900-11392919 | MS.gene069088:intron | 10.0% |
| !!! | TTTTTTTTCTTTTAGATATA+AGG | - | chr5.3:11393350-11393369 | None:intergenic | 10.0% |
| !! | GTTAACATGAAATAATTAAT+TGG | + | chr5.3:11393614-11393633 | MS.gene069088:intron | 15.0% |
| !! | TGAAATAATTAATTGGTTAT+AGG | + | chr5.3:11393621-11393640 | MS.gene069088:intron | 15.0% |
| !! | TTTACAGATTTAAAAATACA+GGG | - | chr5.3:11395347-11395366 | None:intergenic | 15.0% |
| !!! | AAAATTGTCTACTAATTTTA+AGG | + | chr5.3:11395186-11395205 | MS.gene069088:intron | 15.0% |
| !!! | AAATTGTCTACTAATTTTAA+GGG | + | chr5.3:11395187-11395206 | MS.gene069088:intron | 15.0% |
| !!! | AATGAGAAATTTTAAAGTTT+TGG | - | chr5.3:11395467-11395486 | None:intergenic | 15.0% |
| !!! | ATTATGCATTAATTTTCATA+TGG | + | chr5.3:11392598-11392617 | MS.gene069088:intron | 15.0% |
| !!! | CTTTGAAATATAATTATTTG+AGG | + | chr5.3:11396228-11396247 | MS.gene069088:intron | 15.0% |
| !!! | TACTTTCTATGATTTTTAAT+TGG | + | chr5.3:11396171-11396190 | MS.gene069088:intron | 15.0% |
| !!! | TTAGTTTTTGAATTATCTAA+TGG | + | chr5.3:11394762-11394781 | MS.gene069088:intron | 15.0% |
| !!! | TTTTAACATTATCTCTTATT+AGG | - | chr5.3:11395888-11395907 | None:intergenic | 15.0% |
| !! | AAAGTTCCAACAATAAATAT+TGG | - | chr5.3:11394058-11394077 | None:intergenic | 20.0% |
| !! | ACAACTTATGAAAATATCTT+AGG | - | chr5.3:11393937-11393956 | None:intergenic | 20.0% |
| !! | AGAAAAAAAATGATCGAAAA+TGG | + | chr5.3:11393360-11393379 | MS.gene069088:intron | 20.0% |
| !! | ATATCTCCAATATTTATTGT+TGG | + | chr5.3:11394049-11394068 | MS.gene069088:intron | 20.0% |
| !! | ATATTGCTATATTGTTTATG+TGG | + | chr5.3:11394914-11394933 | MS.gene069088:CDS | 20.0% |
| !! | CTTTACAGATTTAAAAATAC+AGG | - | chr5.3:11395348-11395367 | None:intergenic | 20.0% |
| !! | GTAAAATGTTAATCACAAAT+TGG | + | chr5.3:11395258-11395277 | MS.gene069088:intron | 20.0% |
| !! | GTATCAAAGAATTTATTTAC+CGG | - | chr5.3:11394009-11394028 | None:intergenic | 20.0% |
| !! | TAAATACCACCTATAAATTA+AGG | + | chr5.3:11395214-11395233 | MS.gene069088:intron | 20.0% |
| !! | TATTAATCAAGAATATAAGC+AGG | - | chr5.3:11392999-11393018 | None:intergenic | 20.0% |
| !! | TTTGATTGGAAAATTATAGT+TGG | + | chr5.3:11392728-11392747 | MS.gene069088:CDS | 20.0% |
| !!! | AATTGTCTACTAATTTTAAG+GGG | + | chr5.3:11395188-11395207 | MS.gene069088:intron | 20.0% |
| !!! | ATCTTTCCTTTTTTTCAAAT+TGG | + | chr5.3:11395320-11395339 | MS.gene069088:intron | 20.0% |
| !!! | ATTGTAAAACTTGTTACTAT+TGG | + | chr5.3:11395973-11395992 | MS.gene069088:intron | 20.0% |
| !!! | ATTTGGAATCCTTAATTTAT+AGG | - | chr5.3:11395226-11395245 | None:intergenic | 20.0% |
| !!! | GTGTTTTTAATTTGCTTATA+AGG | - | chr5.3:11393844-11393863 | None:intergenic | 20.0% |
| !!! | TTTCTTTTAGATATAAGGTT+CGG | - | chr5.3:11393345-11393364 | None:intergenic | 20.0% |
| ! | AAACTAATTAAACATGTGCT+TGG | - | chr5.3:11394749-11394768 | None:intergenic | 25.0% |
| ! | AAAGGAAACAATGTTGAAAA+AGG | + | chr5.3:11393686-11393705 | MS.gene069088:CDS | 25.0% |
| ! | AACAAGAGTGATTAAATCAA+AGG | + | chr5.3:11394859-11394878 | MS.gene069088:CDS | 25.0% |
| ! | AACAATCTGAACAATTAGAA+AGG | - | chr5.3:11394334-11394353 | None:intergenic | 25.0% |
| ! | AACACTTGTAACTACTAATT+TGG | - | chr5.3:11393295-11393314 | None:intergenic | 25.0% |
| ! | AAGCAAATTAAAAACACCTT+AGG | + | chr5.3:11393847-11393866 | MS.gene069088:intron | 25.0% |
| ! | ACAAGAGTGATTAAATCAAA+GGG | + | chr5.3:11394860-11394879 | MS.gene069088:CDS | 25.0% |
| ! | AGCGATCTAAATAGTAATAT+TGG | - | chr5.3:11395701-11395720 | None:intergenic | 25.0% |
| ! | ATAAATTCTTTGATACGCAT+CGG | + | chr5.3:11394013-11394032 | MS.gene069088:intron | 25.0% |
| ! | ATAATTGCAGGTATGATTAT+GGG | + | chr5.3:11393040-11393059 | MS.gene069088:intron | 25.0% |
| ! | ATATTGTTTATGTGGAGTAA+TGG | + | chr5.3:11394922-11394941 | MS.gene069088:CDS | 25.0% |
| ! | ATTAAGAATCCAATACTCAA+TGG | - | chr5.3:11394683-11394702 | None:intergenic | 25.0% |
| ! | CAATAAATGTTCTTTAGCAA+AGG | - | chr5.3:11394276-11394295 | None:intergenic | 25.0% |
| ! | CTTTGCTAAAGAACATTTAT+TGG | + | chr5.3:11394274-11394293 | MS.gene069088:CDS | 25.0% |
| ! | GACTCAACTTCAAAAAATTT+AGG | - | chr5.3:11393729-11393748 | None:intergenic | 25.0% |
| ! | GTTCTAATAAAGATTCTTTG+AGG | + | chr5.3:11394410-11394429 | MS.gene069088:intron | 25.0% |
| ! | TCAAAAAATTTAGGTGTCTA+AGG | - | chr5.3:11393720-11393739 | None:intergenic | 25.0% |
| ! | TCTAATTGTTCAGATTGTTA+AGG | + | chr5.3:11394335-11394354 | MS.gene069088:CDS | 25.0% |
| ! | TTACTCATCATCTTATTCAT+AGG | + | chr5.3:11393229-11393248 | MS.gene069088:CDS | 25.0% |
| ! | TTATTAGGTAAAATGCATCT+GGG | - | chr5.3:11395873-11395892 | None:intergenic | 25.0% |
| ! | TTGGAAAATCATGAGTATAT+GGG | + | chr5.3:11396311-11396330 | MS.gene069088:CDS | 25.0% |
| ! | TTGTAGTTTCAAAAAGTTGA+AGG | - | chr5.3:11395437-11395456 | None:intergenic | 25.0% |
| ! | TTTACAGAGTAGAAGAAATT+TGG | - | chr5.3:11395243-11395262 | None:intergenic | 25.0% |
| ! | TTTGTTGAGAAAGAAACAAA+AGG | + | chr5.3:11392495-11392514 | MS.gene069088:CDS | 25.0% |
| !! | ATAAAGATTCTTTGAGGAAA+TGG | + | chr5.3:11394416-11394435 | MS.gene069088:intron | 25.0% |
| !! | CTGTTTGATCTTTTATCTAA+CGG | + | chr5.3:11393495-11393514 | MS.gene069088:intron | 25.0% |
| !! | TAAAGATTCTTTGAGGAAAT+GGG | + | chr5.3:11394417-11394436 | MS.gene069088:intron | 25.0% |
| !! | TATTCAAAGGCATAAATACA+TGG | + | chr5.3:11393661-11393680 | MS.gene069088:CDS | 25.0% |
| !!! | AACTGTTTTGTTATGTGTTT+TGG | + | chr5.3:11392627-11392646 | MS.gene069088:intron | 25.0% |
| !!! | AGTTTTGAAAGAAAAAGAAC+CGG | + | chr5.3:11392467-11392486 | MS.gene069088:CDS | 25.0% |
| !!! | ATCTTTGATTTGATAATTGC+AGG | + | chr5.3:11393028-11393047 | MS.gene069088:intron | 25.0% |
| !!! | CGAAATAATGTAGTTTTAGA+TGG | + | chr5.3:11395072-11395091 | MS.gene069088:intron | 25.0% |
| !!! | TATTATGCTTTTTTATCGGT+AGG | + | chr5.3:11392904-11392923 | MS.gene069088:intron | 25.0% |
| !!! | TCAACAAAAGCATTATTCAA+AGG | + | chr5.3:11393648-11393667 | MS.gene069088:CDS | 25.0% |
| !!! | TGTTATGTGTTTTGGTTAAT+TGG | + | chr5.3:11392635-11392654 | MS.gene069088:intron | 25.0% |
| AATACAAGATGAAGTGGTAA+TGG | + | chr5.3:11394160-11394179 | MS.gene069088:intron | 30.0% | |
| AATTAAACATGTGCTTGGTA+AGG | - | chr5.3:11394744-11394763 | None:intergenic | 30.0% | |
| AGCAGGAAATGAAATTTGAT+TGG | + | chr5.3:11392714-11392733 | MS.gene069088:intron | 30.0% | |
| AGCTAAAATAAGTTGTAAGC+CGG | + | chr5.3:11393987-11394006 | MS.gene069088:intron | 30.0% | |
| AGGCATAAATACATGGAAAA+AGG | + | chr5.3:11393668-11393687 | MS.gene069088:CDS | 30.0% | |
| AGGGAAAGGAAGTTAAAAAT+TGG | + | chr5.3:11394879-11394898 | MS.gene069088:CDS | 30.0% | |
| AGTGATAACCTATTATGGTT+TGG | + | chr5.3:11393568-11393587 | MS.gene069088:intron | 30.0% | |
| AGTGATTAAATCAAAGGGAA+AGG | + | chr5.3:11394865-11394884 | MS.gene069088:CDS | 30.0% | |
| ATCACTCCTTGTATATGTTT+GGG | + | chr5.3:11394305-11394324 | MS.gene069088:CDS | 30.0% | |
| ATTATAGTTGGATCAATCGT+TGG | + | chr5.3:11392740-11392759 | MS.gene069088:CDS | 30.0% | |
| CAACTGTTTACTACAATATG+AGG | + | chr5.3:11393074-11393093 | MS.gene069088:CDS | 30.0% | |
| CCATCAATAACGAATTGTTA+AGG | - | chr5.3:11394524-11394543 | None:intergenic | 30.0% | |
| CCTTAACAATTCGTTATTGA+TGG | + | chr5.3:11394521-11394540 | MS.gene069088:intron | 30.0% | |
| CTTATTAGGTAAAATGCATC+TGG | - | chr5.3:11395874-11395893 | None:intergenic | 30.0% | |
| GATAATTGCAGGTATGATTA+TGG | + | chr5.3:11393039-11393058 | MS.gene069088:intron | 30.0% | |
| GATGAAGTGATAACCTATTA+TGG | + | chr5.3:11393563-11393582 | MS.gene069088:intron | 30.0% | |
| GATGTCAAATTAACATCAAG+AGG | - | chr5.3:11395949-11395968 | None:intergenic | 30.0% | |
| GCCAAATCATAATCTATAAG+TGG | - | chr5.3:11393124-11393143 | None:intergenic | 30.0% | |
| GCCACTTATAGATTATGATT+TGG | + | chr5.3:11393120-11393139 | MS.gene069088:CDS | 30.0% | |
| GTTGGAAAATCATGAGTATA+TGG | + | chr5.3:11396310-11396329 | MS.gene069088:CDS | 30.0% | |
| TAGATAAGCCAAACCATAAT+AGG | - | chr5.3:11393579-11393598 | None:intergenic | 30.0% | |
| TAGTAGTTACAAGTGTTTGA+CGG | + | chr5.3:11393298-11393317 | MS.gene069088:intron | 30.0% | |
| TATCACTCCTTGTATATGTT+TGG | + | chr5.3:11394304-11394323 | MS.gene069088:CDS | 30.0% | |
| TCTGCATAGTAACACATAAA+AGG | - | chr5.3:11394642-11394661 | None:intergenic | 30.0% | |
| TGGAAAATCATGAGTATATG+GGG | + | chr5.3:11396312-11396331 | MS.gene069088:CDS | 30.0% | |
| TGGAATCCTTAATTTATAGG+TGG | - | chr5.3:11395223-11395242 | None:intergenic | 30.0% | |
| TGGCTTATCTATTATTGTGT+TGG | + | chr5.3:11393588-11393607 | MS.gene069088:intron | 30.0% | |
| TTAGAAAACTACTTACCGTA+AGG | - | chr5.3:11395732-11395751 | None:intergenic | 30.0% | |
| TTATAATAAACTGAGCGATC+AGG | - | chr5.3:11394566-11394585 | None:intergenic | 30.0% | |
| TTCATAAGTGCAATCAGTTT+AGG | + | chr5.3:11396148-11396167 | MS.gene069088:CDS | 30.0% | |
| TTGGATTCTTAATTTCTTGC+AGG | + | chr5.3:11394690-11394709 | MS.gene069088:CDS | 30.0% | |
| ! | GCATATGATTTTCCAATTCT+AGG | + | chr5.3:11394784-11394803 | MS.gene069088:intron | 30.0% |
| ! | TTCTTTCTTTTGTGTATCAC+AGG | + | chr5.3:11396257-11396276 | MS.gene069088:intron | 30.0% |
| ! | TTCTTTTGTGTTAGATTCTG+AGG | + | chr5.3:11394381-11394400 | MS.gene069088:intron | 30.0% |
| !!! | ATTTCCTGGAGTTTTATTCT+CGG | + | chr5.3:11393399-11393418 | MS.gene069088:intron | 30.0% |
| AAACTACTTACCGTAAGGTA+CGG | - | chr5.3:11395727-11395746 | None:intergenic | 35.0% | |
| AATGTATCACTTATCCATGC+AGG | + | chr5.3:11394248-11394267 | MS.gene069088:intron | 35.0% | |
| AATTTCATTTCCTGCTCAAC+AGG | - | chr5.3:11392710-11392729 | None:intergenic | 35.0% | |
| ACTGATTGCACTTATGAAGA+TGG | - | chr5.3:11396146-11396165 | None:intergenic | 35.0% | |
| ACTGTAACAGAGATAGCAAT+AGG | - | chr5.3:11394812-11394831 | None:intergenic | 35.0% | |
| ACTTCATCTTGTATTTCACC+TGG | - | chr5.3:11394155-11394174 | None:intergenic | 35.0% | |
| AGAAGGATAATTGCAATCCT+TGG | + | chr5.3:11396085-11396104 | MS.gene069088:CDS | 35.0% | |
| AGAGAACATGATTGTGAAGT+TGG | + | chr5.3:11396292-11396311 | MS.gene069088:CDS | 35.0% | |
| AGGTGAAATACAAGATGAAG+TGG | + | chr5.3:11394154-11394173 | MS.gene069088:CDS | 35.0% | |
| AGTCTTCATATGAACCTGTT+TGG | + | chr5.3:11392559-11392578 | MS.gene069088:CDS | 35.0% | |
| CAATGATCAAAGCAAGCATA+GGG | - | chr5.3:11392823-11392842 | None:intergenic | 35.0% | |
| CAGGGACCAATTTGAAAAAA+AGG | - | chr5.3:11395329-11395348 | None:intergenic | 35.0% | |
| CCTTAGGAAAATAGAGTGAA+AGG | + | chr5.3:11393863-11393882 | MS.gene069088:intron | 35.0% | |
| CTGATGCTTGGAATAAGTAT+TGG | + | chr5.3:11393163-11393182 | MS.gene069088:CDS | 35.0% | |
| CTTCATATCTCTTGTGTGTT+CGG | + | chr5.3:11395035-11395054 | MS.gene069088:intron | 35.0% | |
| GAAGCTGTATGCATATACAA+AGG | + | chr5.3:11394836-11394855 | MS.gene069088:CDS | 35.0% | |
| GCATAATGTTATGAACTCAC+AGG | - | chr5.3:11392585-11392604 | None:intergenic | 35.0% | |
| GTAATATTGGACTACTGACA+TGG | - | chr5.3:11395688-11395707 | None:intergenic | 35.0% | |
| TAATAATTGAAGCACGACCA+AGG | - | chr5.3:11396105-11396124 | None:intergenic | 35.0% | |
| TACTAATTTGGCGATATCAC+TGG | - | chr5.3:11393283-11393302 | None:intergenic | 35.0% | |
| TAGCAATAGGAACCTAGAAT+TGG | - | chr5.3:11394799-11394818 | None:intergenic | 35.0% | |
| TCAGTCTAAAAATCGAACTC+AGG | + | chr5.3:11394494-11394513 | MS.gene069088:intron | 35.0% | |
| TCTTTCTCAACAAACTTTGC+CGG | - | chr5.3:11392489-11392508 | None:intergenic | 35.0% | |
| TTGGAAGAAGAACCAAAAAC+TGG | + | chr5.3:11393810-11393829 | MS.gene069088:CDS | 35.0% | |
| ! | AAAAGGATTTCTAAGAGCAG+TGG | + | chr5.3:11392512-11392531 | MS.gene069088:CDS | 35.0% |
| ! | AGCAGTGGTTGATTTCTTAT+GGG | + | chr5.3:11392527-11392546 | MS.gene069088:CDS | 35.0% |
| ! | AGTGTGAGTGTTGTAAATTC+TGG | - | chr5.3:11392947-11392966 | None:intergenic | 35.0% |
| ! | CCTTTCACTCTATTTTCCTA+AGG | - | chr5.3:11393866-11393885 | None:intergenic | 35.0% |
| ! | GTAATGTCATGTTTGCTGAT+TGG | + | chr5.3:11393194-11393213 | MS.gene069088:CDS | 35.0% |
| ! | GTTGATTTCTTATGGGAAAG+TGG | + | chr5.3:11392534-11392553 | MS.gene069088:CDS | 35.0% |
| ! | TGTGTTAGATTCTGAGGAAA+GGG | + | chr5.3:11394387-11394406 | MS.gene069088:intron | 35.0% |
| ! | TTGTGTTAGATTCTGAGGAA+AGG | + | chr5.3:11394386-11394405 | MS.gene069088:intron | 35.0% |
| ! | TTTCTTTTGTGTATCACAGG+TGG | + | chr5.3:11396260-11396279 | MS.gene069088:intron | 35.0% |
| !! | TGCAGCTTCATACTTTGTTT+TGG | + | chr5.3:11396024-11396043 | MS.gene069088:intron | 35.0% |
| AACGCACTTACACTTGGAAA+TGG | - | chr5.3:11392870-11392889 | None:intergenic | 40.0% | |
| AACTACTTACCGTAAGGTAC+GGG | - | chr5.3:11395726-11395745 | None:intergenic | 40.0% | |
| AATTTGGCGATATCACTGGT+CGG | - | chr5.3:11393279-11393298 | None:intergenic | 40.0% | |
| ACTCCTTGTATATGTTTGGG+TGG | + | chr5.3:11394308-11394327 | MS.gene069088:CDS | 40.0% | |
| AGTAGCTTTCTTATCACCAG+AGG | - | chr5.3:11393764-11393783 | None:intergenic | 40.0% | |
| ATAAGTGGCATGTCTAGTGT+TGG | - | chr5.3:11393109-11393128 | None:intergenic | 40.0% | |
| ATATTGGACTACTGACATGG+AGG | - | chr5.3:11395685-11395704 | None:intergenic | 40.0% | |
| CATGGAGGATGAAAAAAGCA+TGG | - | chr5.3:11395670-11395689 | None:intergenic | 40.0% | |
| CCAATGATCAAAGCAAGCAT+AGG | - | chr5.3:11392824-11392843 | None:intergenic | 40.0% | |
| CCTATGCTTGCTTTGATCAT+TGG | + | chr5.3:11392821-11392840 | MS.gene069088:CDS | 40.0% | |
| CTTATTCCAAGCATCAGCAT+AGG | - | chr5.3:11393160-11393179 | None:intergenic | 40.0% | |
| GAAATGGCTGTAGAAGACTT+GGG | - | chr5.3:11392854-11392873 | None:intergenic | 40.0% | |
| GAAGAAGAACCAAAAACTGG+TGG | + | chr5.3:11393813-11393832 | MS.gene069088:CDS | 40.0% | |
| GATCATGTGTATCCTTGTTG+TGG | + | chr5.3:11392419-11392438 | MS.gene069088:CDS | 40.0% | |
| GGATCAATCGTTGGATTCTT+GGG | + | chr5.3:11392749-11392768 | MS.gene069088:CDS | 40.0% | |
| GGTTGTGAGCTAATTGAGTT+AGG | + | chr5.3:11393319-11393338 | MS.gene069088:intron | 40.0% | |
| TAAGTGGCATGTCTAGTGTT+GGG | - | chr5.3:11393108-11393127 | None:intergenic | 40.0% | |
| TATTTACTTGCCTGTTGAGC+AGG | + | chr5.3:11392697-11392716 | MS.gene069088:intron | 40.0% | |
| TGGATCAATCGTTGGATTCT+TGG | + | chr5.3:11392748-11392767 | MS.gene069088:CDS | 40.0% | |
| TGTTTATGTGGAGTAATGGC+TGG | + | chr5.3:11394926-11394945 | MS.gene069088:CDS | 40.0% | |
| TTCTTATCACCAGAGGATGA+AGG | - | chr5.3:11393757-11393776 | None:intergenic | 40.0% | |
| ! | AAGGACTTACCACCAGTTTT+TGG | - | chr5.3:11393825-11393844 | None:intergenic | 40.0% |
| ! | ACAAATTTGTTCTCTGCTGC+AGG | + | chr5.3:11395620-11395639 | MS.gene069088:intron | 40.0% |
| ! | AGAAAGCTACTTTGACATGC+AGG | + | chr5.3:11393773-11393792 | MS.gene069088:intron | 40.0% |
| ! | AGACTTGCTCCATTGAGTAT+TGG | + | chr5.3:11394671-11394690 | MS.gene069088:CDS | 40.0% |
| ! | AGATATGAAGAGTGTACCTG+CGG | - | chr5.3:11395025-11395044 | None:intergenic | 40.0% |
| ! | AGCGTGCTGTTAAAATTTCC+TGG | + | chr5.3:11393385-11393404 | MS.gene069088:intron | 40.0% |
| ! | ATTCCCATTTCTAGGAACAG+TGG | - | chr5.3:11394998-11395017 | None:intergenic | 40.0% |
| ! | GAGCAGTGGTTGATTTCTTA+TGG | + | chr5.3:11392526-11392545 | MS.gene069088:CDS | 40.0% |
| ! | GTGTTAGATTCTGAGGAAAG+GGG | + | chr5.3:11394388-11394407 | MS.gene069088:intron | 40.0% |
| ! | TGTCATGTTTGCTGATTGGA+TGG | + | chr5.3:11393198-11393217 | MS.gene069088:CDS | 40.0% |
| !!! | CTCATAGAGCTCTAGCTTTT+GGG | + | chr5.3:11395559-11395578 | MS.gene069088:intron | 40.0% |
| !!! | TCATAGAGCTCTAGCTTTTG+GGG | + | chr5.3:11395560-11395579 | MS.gene069088:intron | 40.0% |
| ACGACCGAGAATAAAACTCC+AGG | - | chr5.3:11393406-11393425 | None:intergenic | 45.0% | |
| ACTACTTACCGTAAGGTACG+GGG | - | chr5.3:11395725-11395744 | None:intergenic | 45.0% | |
| AGGCCACCCAAACATATACA+AGG | - | chr5.3:11394314-11394333 | None:intergenic | 45.0% | |
| AGTCTCATTCCTTCATCCTC+TGG | + | chr5.3:11393745-11393764 | MS.gene069088:intron | 45.0% | |
| ATGTGGAGTAATGGCTGGTA+TGG | + | chr5.3:11394931-11394950 | MS.gene069088:CDS | 45.0% | |
| CACACAAACGCACTTACACT+TGG | - | chr5.3:11392876-11392895 | None:intergenic | 45.0% | |
| CCAAAAGCTAGAGCTCTATG+AGG | - | chr5.3:11395561-11395580 | None:intergenic | 45.0% | |
| CTTTGGTTACTGCAGCAACA+TGG | + | chr5.3:11392394-11392413 | MS.gene069088:CDS | 45.0% | |
| GCAGGACTAACGCAATTAGT+TGG | - | chr5.3:11392981-11393000 | None:intergenic | 45.0% | |
| GGAAATGGCTGTAGAAGACT+TGG | - | chr5.3:11392855-11392874 | None:intergenic | 45.0% | |
| TAATGGCTGGTATGGTTGGA+GGG | + | chr5.3:11394939-11394958 | MS.gene069088:CDS | 45.0% | |
| TATGAACTCACAGGCCAAAC+AGG | - | chr5.3:11392576-11392595 | None:intergenic | 45.0% | |
| TGACATTGCAGACCACAACA+AGG | - | chr5.3:11392434-11392453 | None:intergenic | 45.0% | |
| TGGTTCTTCTTCCAACTGCT+TGG | - | chr5.3:11393805-11393824 | None:intergenic | 45.0% | |
| TGTATTTCACCTGGACCCTT+TGG | - | chr5.3:11394146-11394165 | None:intergenic | 45.0% | |
| TTATCCTTCTCACCACATGC+TGG | - | chr5.3:11396075-11396094 | None:intergenic | 45.0% | |
| TTGTGTATCACAGGTGGAGT+AGG | + | chr5.3:11396266-11396285 | MS.gene069088:intron | 45.0% | |
| ! | CTAGGAGGTGGCTTCATTTT+GGG | + | chr5.3:11394971-11394990 | MS.gene069088:CDS | 45.0% |
| ! | TAGGAGGTGGCTTCATTTTG+GGG | + | chr5.3:11394972-11394991 | MS.gene069088:CDS | 45.0% |
| ! | TCTAGGAGGTGGCTTCATTT+TGG | + | chr5.3:11394970-11394989 | MS.gene069088:CDS | 45.0% |
| !!! | CCTCATAGAGCTCTAGCTTT+TGG | + | chr5.3:11395558-11395577 | MS.gene069088:intron | 45.0% |
| !! | AAATTATGAAAAAAATAATT+AGG | - | chr5.3:11395376-11395395 | None:intergenic | 5.0% |
| !! | AATTATGAAAAAAATAATTA+GGG | - | chr5.3:11395375-11395394 | None:intergenic | 5.0% |
| !!! | CTTTAAATTTTTAAAATTTA+AGG | - | chr5.3:11395409-11395428 | None:intergenic | 5.0% |
| AGAAATGGGAATTCCTCCGC+AGG | + | chr5.3:11395006-11395025 | MS.gene069088:CDS | 50.0% | |
| AGACTACAAGCCCCTACCAA+AGG | + | chr5.3:11394127-11394146 | MS.gene069088:CDS | 50.0% | |
| CGTTGATCTAGATCGACTGC+AGG | - | chr5.3:11393535-11393554 | None:intergenic | 50.0% | |
| GACTACAAGCCCCTACCAAA+GGG | + | chr5.3:11394128-11394147 | MS.gene069088:CDS | 50.0% | |
| GCAACCATAGCTGCATTTGC+TGG | + | chr5.3:11396049-11396068 | MS.gene069088:CDS | 50.0% | |
| GCGGAGGAATTCCCATTTCT+AGG | - | chr5.3:11395006-11395025 | None:intergenic | 50.0% | |
| GGAGTAATGGCTGGTATGGT+TGG | + | chr5.3:11394935-11394954 | MS.gene069088:CDS | 50.0% | |
| GGATTCTTGGGAGCAGCTTT+GGG | + | chr5.3:11392761-11392780 | MS.gene069088:CDS | 50.0% | |
| GGGCCACTGTTCCTAGAAAT+GGG | + | chr5.3:11394992-11395011 | MS.gene069088:CDS | 50.0% | |
| GTAATGGCTGGTATGGTTGG+AGG | + | chr5.3:11394938-11394957 | MS.gene069088:CDS | 50.0% | |
| TGGATTCTTGGGAGCAGCTT+TGG | + | chr5.3:11392760-11392779 | MS.gene069088:CDS | 50.0% | |
| TTCACCTGGACCCTTTGGTA+GGG | - | chr5.3:11394141-11394160 | None:intergenic | 50.0% | |
| TTCCAAGCATCAGCATAGGC+TGG | - | chr5.3:11393156-11393175 | None:intergenic | 50.0% | |
| TTCCAGCCTATGCTGATGCT+TGG | + | chr5.3:11393151-11393170 | MS.gene069088:CDS | 50.0% | |
| TTTCACCTGGACCCTTTGGT+AGG | - | chr5.3:11394142-11394161 | None:intergenic | 50.0% | |
| ! | TATGAAGAGTGTACCTGCGG+AGG | - | chr5.3:11395022-11395041 | None:intergenic | 50.0% |
| !! | CTTTAGCAAAGGCACCTGCA+TGG | - | chr5.3:11394265-11394284 | None:intergenic | 50.0% |
| !! | TTGGGAAGTGTTGGAGGTGT+AGG | + | chr5.3:11392779-11392798 | MS.gene069088:CDS | 50.0% |
| ACTGAGCGATCAGGCTCAAG+TGG | - | chr5.3:11394557-11394576 | None:intergenic | 55.0% | |
| CTGGCCAGCAAATGCAGCTA+TGG | - | chr5.3:11396056-11396075 | None:intergenic | 55.0% | |
| GATCGCTTCCCCGTACCTTA+CGG | + | chr5.3:11395714-11395733 | MS.gene069088:CDS | 55.0% | |
| GGGGCCACTGTTCCTAGAAA+TGG | + | chr5.3:11394991-11395010 | MS.gene069088:CDS | 55.0% | |
| GGTATGGTTGGAGGGTTGCT+TGG | + | chr5.3:11394947-11394966 | MS.gene069088:CDS | 55.0% | |
| GTTGGAGGGTTGCTTGGTCT+AGG | + | chr5.3:11394953-11394972 | MS.gene069088:CDS | 55.0% | |
| TCACCTGGACCCTTTGGTAG+GGG | - | chr5.3:11394140-11394159 | None:intergenic | 55.0% | |
| ! | AGTGTTGGAGGTGTAGGAGG+TGG | + | chr5.3:11392785-11392804 | MS.gene069088:CDS | 55.0% |
| ! | TGCATTTGCTGGCCAGCATG+TGG | + | chr5.3:11396060-11396079 | MS.gene069088:CDS | 55.0% |
| !! | GCAGCTTTGGGAAGTGTTGG+AGG | + | chr5.3:11392773-11392792 | MS.gene069088:CDS | 55.0% |
| !! | GGAAGTGTTGGAGGTGTAGG+AGG | + | chr5.3:11392782-11392801 | MS.gene069088:CDS | 55.0% |
| !! | GGAGCAGCTTTGGGAAGTGT+TGG | + | chr5.3:11392770-11392789 | MS.gene069088:CDS | 55.0% |
| AAGCCCCTACCAAAGGGTCC+AGG | + | chr5.3:11394134-11394153 | MS.gene069088:CDS | 60.0% | |
| CTGGCCAGCATGTGGTGAGA+AGG | + | chr5.3:11396068-11396087 | MS.gene069088:CDS | 60.0% | |
| GCAGGAAGCAGCCAAGCAGT+TGG | + | chr5.3:11393791-11393810 | MS.gene069088:intron | 60.0% | |
| GGAGGGTTGCTTGGTCTAGG+AGG | + | chr5.3:11394956-11394975 | MS.gene069088:CDS | 60.0% | |
| GGGTTGCTTGGTCTAGGAGG+TGG | + | chr5.3:11394959-11394978 | MS.gene069088:CDS | 60.0% | |
| ! | GTTGGAGGTGTAGGAGGTGG+TGG | + | chr5.3:11392788-11392807 | MS.gene069088:CDS | 60.0% |
| GGCGATATCACTGGTCGGCG+TGG | - | chr5.3:11393274-11393293 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 11392381 | 11396358 | 11392381 | ID=MS.gene069088 |
| chr5.3 | mRNA | 11392381 | 11396358 | 11392381 | ID=MS.gene069088.t1;Parent=MS.gene069088 |
| chr5.3 | exon | 11392381 | 11392584 | 11392381 | ID=MS.gene069088.t1.exon1;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11392381 | 11392584 | 11392381 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11392719 | 11392878 | 11392719 | ID=MS.gene069088.t1.exon2;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11392719 | 11392878 | 11392719 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11393050 | 11393250 | 11393050 | ID=MS.gene069088.t1.exon3;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11393050 | 11393250 | 11393050 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11393643 | 11393707 | 11393643 | ID=MS.gene069088.t1.exon4;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11393643 | 11393707 | 11393643 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11393795 | 11393834 | 11393795 | ID=MS.gene069088.t1.exon5;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11393795 | 11393834 | 11393795 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11394126 | 11394175 | 11394126 | ID=MS.gene069088.t1.exon6;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11394126 | 11394175 | 11394126 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11394270 | 11394356 | 11394270 | ID=MS.gene069088.t1.exon7;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11394270 | 11394356 | 11394270 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11394661 | 11394711 | 11394661 | ID=MS.gene069088.t1.exon8;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11394661 | 11394711 | 11394661 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11394806 | 11395027 | 11394806 | ID=MS.gene069088.t1.exon9;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11394806 | 11395027 | 11394806 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11395642 | 11395735 | 11395642 | ID=MS.gene069088.t1.exon10;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11395642 | 11395735 | 11395642 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11396029 | 11396169 | 11396029 | ID=MS.gene069088.t1.exon11;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11396029 | 11396169 | 11396029 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| chr5.3 | exon | 11396279 | 11396358 | 11396279 | ID=MS.gene069088.t1.exon12;Parent=MS.gene069088.t1 |
| chr5.3 | CDS | 11396279 | 11396358 | 11396279 | ID=cds.MS.gene069088.t1;Parent=MS.gene069088.t1 |
| Gene Sequence |
| Protein sequence |
