Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070278.t1 | XP_003610062.1 | 87.2 | 384 | 45 | 3 | 5 | 387 | 2 | 382 | 3.10E-195 | 691 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070278.t1 | Q9LVD4 | 50.9 | 381 | 179 | 4 | 5 | 384 | 2 | 375 | 1.5e-110 | 401.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070278.t1 | G7JUB4 | 87.2 | 384 | 45 | 3 | 5 | 387 | 2 | 382 | 2.2e-195 | 691.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene070278 | 0.858551 | 7.62E-63 | -1.69E-46 |
| MS.gene049915 | MS.gene070278 | 0.800432 | 1.45E-48 | -1.69E-46 |
| MS.gene050099 | MS.gene070278 | 0.811629 | 6.36E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene070278 | 0.802114 | 6.54E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene070278 | 0.806672 | 7.34E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene070278 | 0.847479 | 1.13E-59 | -1.69E-46 |
| MS.gene053836 | MS.gene070278 | 0.824627 | 7.29E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene070278 | 0.82555 | 4.41E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene070278 | 0.813172 | 2.93E-51 | -1.69E-46 |
| MS.gene055428 | MS.gene070278 | 0.811209 | 7.85E-51 | -1.69E-46 |
| MS.gene057439 | MS.gene070278 | 0.806379 | 8.47E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene070278 | 0.834171 | 3.50E-56 | -1.69E-46 |
| MS.gene058182 | MS.gene070278 | 0.803953 | 2.72E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene070278 | 0.814563 | 1.45E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene070278 | 0.81057 | 1.08E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene070278 | 0.817315 | 3.51E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene070278 | 0.822413 | 2.40E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99026 | MS.gene070278 | PPI |
| MS.gene032779 | MS.gene070278 | PPI |
| MS.gene070278 | MS.gene49595 | PPI |
| MS.gene066288 | MS.gene070278 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070278.t1 | MTR_4g127510 | 87.240 | 384 | 45 | 3 | 5 | 387 | 2 | 382 | 0.0 | 686 |
| MS.gene070278.t1 | MTR_2g037770 | 68.504 | 381 | 116 | 3 | 7 | 387 | 6 | 382 | 0.0 | 536 |
| MS.gene070278.t1 | MTR_2g037790 | 63.918 | 388 | 133 | 4 | 1 | 387 | 3 | 384 | 1.51e-179 | 504 |
| MS.gene070278.t1 | MTR_2g037790 | 63.918 | 388 | 133 | 4 | 1 | 387 | 6 | 387 | 1.88e-179 | 504 |
| MS.gene070278.t1 | MTR_4g127490 | 62.141 | 383 | 140 | 4 | 5 | 384 | 13 | 393 | 9.16e-170 | 480 |
| MS.gene070278.t1 | MTR_4g127490 | 62.141 | 383 | 140 | 4 | 5 | 384 | 11 | 391 | 9.21e-170 | 480 |
| MS.gene070278.t1 | MTR_2g037770 | 68.421 | 304 | 92 | 3 | 1 | 304 | 1 | 300 | 1.02e-147 | 421 |
| MS.gene070278.t1 | MTR_2g037770 | 69.128 | 298 | 88 | 3 | 7 | 304 | 6 | 299 | 8.37e-147 | 419 |
| MS.gene070278.t1 | MTR_2g037770 | 69.663 | 267 | 77 | 3 | 7 | 273 | 6 | 268 | 3.63e-132 | 380 |
| MS.gene070278.t1 | MTR_4g064110 | 27.035 | 344 | 208 | 12 | 47 | 364 | 78 | 404 | 8.74e-21 | 94.0 |
| MS.gene070278.t1 | MTR_7g061830 | 26.879 | 346 | 206 | 14 | 47 | 364 | 82 | 408 | 9.73e-17 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070278.t1 | AT5G57240 | 50.653 | 383 | 181 | 4 | 5 | 386 | 2 | 377 | 1.17e-136 | 395 |
| MS.gene070278.t1 | AT5G57240 | 50.653 | 383 | 181 | 4 | 5 | 386 | 2 | 377 | 1.17e-136 | 395 |
| MS.gene070278.t1 | AT5G57240 | 50.653 | 383 | 181 | 4 | 5 | 386 | 2 | 377 | 1.17e-136 | 395 |
| MS.gene070278.t1 | AT4G25850 | 52.231 | 381 | 174 | 4 | 6 | 385 | 8 | 381 | 5.89e-136 | 394 |
| MS.gene070278.t1 | AT4G25850 | 52.231 | 381 | 174 | 4 | 6 | 385 | 110 | 483 | 3.20e-134 | 393 |
| MS.gene070278.t1 | AT5G57240 | 47.549 | 408 | 181 | 5 | 5 | 386 | 2 | 402 | 1.34e-130 | 381 |
| MS.gene070278.t1 | AT5G57240 | 47.549 | 408 | 181 | 5 | 5 | 386 | 2 | 402 | 1.34e-130 | 381 |
| MS.gene070278.t1 | AT4G25860 | 49.606 | 381 | 184 | 4 | 6 | 385 | 9 | 382 | 9.26e-127 | 370 |
| MS.gene070278.t1 | AT4G25860 | 49.606 | 381 | 184 | 4 | 6 | 385 | 3 | 376 | 1.21e-126 | 370 |
| MS.gene070278.t1 | AT4G25850 | 53.008 | 266 | 118 | 3 | 6 | 270 | 8 | 267 | 2.18e-90 | 273 |
| MS.gene070278.t1 | AT5G59420 | 26.531 | 343 | 209 | 12 | 47 | 363 | 77 | 402 | 9.07e-18 | 85.1 |
| MS.gene070278.t1 | AT5G02100 | 27.801 | 241 | 144 | 11 | 47 | 275 | 77 | 299 | 3.73e-14 | 73.2 |
Find 103 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAGTCAAAAGGGGAAATT+TGG | 0.145591 | 8.2:+5658632 | MS.gene070278:CDS |
| AGTACTTGCTGTAATGTATT+TGG | 0.169490 | 8.2:-5654775 | None:intergenic |
| ACTACACGACCACAGAAATT+TGG | 0.188123 | 8.2:+5655211 | MS.gene070278:CDS |
| AACAGAATCTGCTCTTGTTT+GGG | 0.210716 | 8.2:+5658513 | MS.gene070278:CDS |
| AGACAATCTTTCTTTGGATT+TGG | 0.216954 | 8.2:+5657783 | MS.gene070278:CDS |
| AGAAATCTGAATAAGAAATT+TGG | 0.242852 | 8.2:-5657678 | None:intergenic |
| CAACAGAATCTGCTCTTGTT+TGG | 0.245208 | 8.2:+5658512 | MS.gene070278:CDS |
| CATATGTCTCTCCATGATTA+TGG | 0.251319 | 8.2:-5657644 | None:intergenic |
| CTGCTACCAGGCCTGTTTCT+AGG | 0.260032 | 8.2:-5657746 | None:intergenic |
| GCTCCCTACAATCCCATTCT+TGG | 0.262230 | 8.2:+5655238 | MS.gene070278:CDS |
| TTCCAATTCCTGGTATTGAT+TGG | 0.273123 | 8.2:+5657700 | MS.gene070278:CDS |
| TACACTAGACAATCTTTCTT+TGG | 0.278088 | 8.2:+5657777 | MS.gene070278:CDS |
| GGAAATCGAAGACGGATAAA+AGG | 0.297030 | 8.2:+5657810 | MS.gene070278:CDS |
| GACAATCTTTCTTTGGATTT+GGG | 0.297690 | 8.2:+5657784 | MS.gene070278:CDS |
| TTCAGATTTCTTCCAATTCC+TGG | 0.299189 | 8.2:+5657690 | MS.gene070278:CDS |
| TTTATAACATTGACGGTCAT+TGG | 0.319680 | 8.2:+5657865 | MS.gene070278:CDS |
| AGGGTGGCAATAGGAGCATT+TGG | 0.340915 | 8.2:-5658727 | None:intergenic |
| TCCAATTCCTGGTATTGATT+GGG | 0.344320 | 8.2:+5657701 | MS.gene070278:CDS |
| GATCCTTAACAAAAGGAGTA+TGG | 0.346607 | 8.2:-5658289 | None:intergenic |
| ATCTGATCTGTCACGCTTCA+AGG | 0.378726 | 8.2:+5654825 | MS.gene070278:CDS |
| TCCCCAATCGTTGCTTATGA+TGG | 0.379990 | 8.2:-5658551 | None:intergenic |
| GATCCAGATAAATAATTATA+GGG | 0.385472 | 8.2:-5658746 | None:intergenic |
| ACCCAATCAATACCAGGAAT+TGG | 0.388589 | 8.2:-5657702 | None:intergenic |
| AATAATTATAGGGTGGCAAT+AGG | 0.420289 | 8.2:-5658736 | None:intergenic |
| TCTCCACTTCCAAAGTTTGT+TGG | 0.426253 | 8.2:+5657431 | MS.gene070278:CDS |
| ACTATCCGGTGCCTAGAAAC+AGG | 0.426852 | 8.2:+5657735 | MS.gene070278:CDS |
| TGAGTCACTATAAAATGTTT+AGG | 0.427110 | 8.2:-5658658 | None:intergenic |
| ACAGTTCCAGCCATCTTCAT+TGG | 0.435258 | 8.2:-5658683 | None:intergenic |
| AATGTTCTTTATAACATTGA+CGG | 0.438522 | 8.2:+5657858 | MS.gene070278:CDS |
| TTATAACATTGACGGTCATT+GGG | 0.448664 | 8.2:+5657866 | MS.gene070278:CDS |
| ATGGTGGGTTTCACCAAGAA+TGG | 0.451451 | 8.2:-5655251 | None:intergenic |
| TTAGAGAAAGAGAGTCAAAA+GGG | 0.454350 | 8.2:+5658623 | MS.gene070278:CDS |
| AGCCATCATAAGCAACGATT+GGG | 0.455090 | 8.2:+5658549 | MS.gene070278:CDS |
| AGAGTCAAAAGGGGAAATTT+GGG | 0.456782 | 8.2:+5658633 | MS.gene070278:CDS |
| AATCGTTGCTTATGATGGCT+TGG | 0.457816 | 8.2:-5658546 | None:intergenic |
| CTTAGAGAAAGAGAGTCAAA+AGG | 0.461372 | 8.2:+5658622 | MS.gene070278:CDS |
| CCTTAACGTCTTGCTCGAAC+AGG | 0.465737 | 8.2:+5655288 | MS.gene070278:CDS |
| TCTTTCTTTGGATTTGGGTC+GGG | 0.467324 | 8.2:+5657789 | MS.gene070278:CDS |
| GGGTGGCAATAGGAGCATTT+GGG | 0.468418 | 8.2:-5658726 | None:intergenic |
| ATCTTTCTTTGGATTTGGGT+CGG | 0.469873 | 8.2:+5657788 | MS.gene070278:CDS |
| TAAGTCTCTTCAAGAATGTT+CGG | 0.473557 | 8.2:+5654797 | MS.gene070278:CDS |
| ACCTCTAGATCCTTAACAAA+AGG | 0.474417 | 8.2:-5658296 | None:intergenic |
| CAAGTCTACTCCTGTGGCTG+TGG | 0.475561 | 8.2:-5655119 | None:intergenic |
| TACCATTGAAGCTGTGACTT+AGG | 0.485158 | 8.2:-5655079 | None:intergenic |
| TTCACCAAGAATGGGATTGT+AGG | 0.487044 | 8.2:-5655242 | None:intergenic |
| CTCTTCAAGAATGTTCGGTT+AGG | 0.494318 | 8.2:+5654802 | MS.gene070278:CDS |
| GAAACCCACCATGTTTCTAA+AGG | 0.495301 | 8.2:+5655262 | MS.gene070278:CDS |
| AAACCCACCATGTTTCTAAA+GGG | 0.496469 | 8.2:+5655263 | MS.gene070278:CDS |
| TTACCAACAAACTTTGGAAG+TGG | 0.498053 | 8.2:-5657434 | None:intergenic |
| TGGTGGGTTTCACCAAGAAT+GGG | 0.499357 | 8.2:-5655250 | None:intergenic |
| GCAGGTTTCACACCATCCTC+AGG | 0.503834 | 8.2:+5657352 | MS.gene070278:intron |
| CTGTGACTTAGGCATGTTGA+AGG | 0.504962 | 8.2:-5655068 | None:intergenic |
| CCTGTTCGAGCAAGACGTTA+AGG | 0.505938 | 8.2:-5655288 | None:intergenic |
| AAGCCATCATAAGCAACGAT+TGG | 0.513927 | 8.2:+5658548 | MS.gene070278:CDS |
| TCACCAAGAATGGGATTGTA+GGG | 0.514686 | 8.2:-5655241 | None:intergenic |
| CTCATACCAATGAAGATGGC+TGG | 0.515393 | 8.2:+5658677 | MS.gene070278:CDS |
| CAACTGCACCTCCATAATCA+TGG | 0.525416 | 8.2:+5657633 | MS.gene070278:CDS |
| TGCCTAAGTCACAGCTTCAA+TGG | 0.525691 | 8.2:+5655077 | MS.gene070278:CDS |
| AAGTCACAGCTTCAATGGTA+TGG | 0.534057 | 8.2:+5655082 | MS.gene070278:CDS |
| GGGTTGGCAATGTCACTATC+CGG | 0.534777 | 8.2:+5657721 | MS.gene070278:CDS |
| AACAAATCATCGGATTCTGA+TGG | 0.535295 | 8.2:+5654739 | MS.gene070278:CDS |
| GAAATCGAAGACGGATAAAA+GGG | 0.537567 | 8.2:+5657811 | MS.gene070278:CDS |
| TGTGTATATTCCACAGCCAC+AGG | 0.543811 | 8.2:+5655109 | MS.gene070278:CDS |
| ACTGTTCACCAATTCAAAAG+TGG | 0.544922 | 8.2:+5658701 | MS.gene070278:CDS |
| GTGACTCATACCAATGAAGA+TGG | 0.549751 | 8.2:+5658673 | MS.gene070278:CDS |
| ATTCCTGGTATTGATTGGGT+TGG | 0.551107 | 8.2:+5657705 | MS.gene070278:CDS |
| GACTTATATCAGTTGTAGCA+TGG | 0.557193 | 8.2:+5655179 | MS.gene070278:CDS |
| ACAGAATCTGCTCTTGTTTG+GGG | 0.557754 | 8.2:+5658514 | MS.gene070278:CDS |
| ACAAATCATCGGATTCTGAT+GGG | 0.561719 | 8.2:+5654740 | MS.gene070278:CDS |
| ACATTGACGGTCATTGGGAT+AGG | 0.562966 | 8.2:+5657871 | MS.gene070278:CDS |
| TGTAGCTCAATTCTGCTACC+AGG | 0.567744 | 8.2:-5657758 | None:intergenic |
| TTTCCATCTGATCAGTGGCA+TGG | 0.571356 | 8.2:-5657385 | None:intergenic |
| CCAGGCCTGTTTCTAGGCAC+CGG | 0.578301 | 8.2:-5657740 | None:intergenic |
| AAATTATAAATGCAGGTACA+GGG | 0.580423 | 8.2:+5657583 | MS.gene070278:intron |
| TAAGGTTCCCTTTAGAAACA+TGG | 0.582927 | 8.2:-5655270 | None:intergenic |
| AATAGACAACAACAAATCAT+CGG | 0.591062 | 8.2:+5654729 | MS.gene070278:CDS |
| ATTCCATGCCACTGATCAGA+TGG | 0.593014 | 8.2:+5657382 | MS.gene070278:CDS |
| GTTTAGCAAGTCTACTCCTG+TGG | 0.609510 | 8.2:-5655125 | None:intergenic |
| TTGTTGTCTATTGTTGCGAG+TGG | 0.612182 | 8.2:-5654718 | None:intergenic |
| CCGGTGCCTAGAAACAGGCC+TGG | 0.615502 | 8.2:+5657740 | MS.gene070278:CDS |
| CTGTTCACCAATTCAAAAGT+GGG | 0.616115 | 8.2:+5658702 | MS.gene070278:CDS |
| GTTCCCTTTAGAAACATGGT+GGG | 0.616437 | 8.2:-5655266 | None:intergenic |
| CAAACAAGAGCAGATTCTGT+TGG | 0.621500 | 8.2:-5658511 | None:intergenic |
| CGATTGGGGAAAAGCAAGAG+AGG | 0.622181 | 8.2:+5658564 | MS.gene070278:CDS |
| TTGCTAAACAACATCAACAA+TGG | 0.626138 | 8.2:+5655139 | MS.gene070278:CDS |
| GGTTCCCTTTAGAAACATGG+TGG | 0.629919 | 8.2:-5655267 | None:intergenic |
| GGGGTAGAAGTTGACATGCA+TGG | 0.630449 | 8.2:+5657603 | MS.gene070278:CDS |
| AAGAGAGGCAAAGAACACTC+TGG | 0.634477 | 8.2:+5658579 | MS.gene070278:CDS |
| CAAACTTTGGAAGTGGAGAG+TGG | 0.635431 | 8.2:-5657427 | None:intergenic |
| TTGCCAACCCAATCAATACC+AGG | 0.642684 | 8.2:-5657708 | None:intergenic |
| TTGGGTCGGGAAATCGAAGA+CGG | 0.645859 | 8.2:+5657802 | MS.gene070278:CDS |
| CCAGATAAATAATTATAGGG+TGG | 0.646503 | 8.2:-5658743 | None:intergenic |
| TTAGGCATGTTGAAGGTAGG+TGG | 0.647292 | 8.2:-5655061 | None:intergenic |
| ATGTCTCTCCATGATTATGG+AGG | 0.650308 | 8.2:-5657641 | None:intergenic |
| GCCATCATAAGCAACGATTG+GGG | 0.655456 | 8.2:+5658550 | MS.gene070278:CDS |
| GACTTAGGCATGTTGAAGGT+AGG | 0.658758 | 8.2:-5655064 | None:intergenic |
| AATTATAAATGCAGGTACAG+GGG | 0.662926 | 8.2:+5657584 | MS.gene070278:intron |
| TAGAGAAAGAGAGTCAAAAG+GGG | 0.666484 | 8.2:+5658624 | MS.gene070278:CDS |
| GGAGCAAATCCAAATTTCTG+TGG | 0.677683 | 8.2:-5655220 | None:intergenic |
| AGAGGCAAAGAACACTCTGG+AGG | 0.685308 | 8.2:+5658582 | MS.gene070278:CDS |
| GGAATGCAGATACCTGAGGA+TGG | 0.705504 | 8.2:-5657364 | None:intergenic |
| ACACTCTGGAGGAAACTCAG+AGG | 0.724153 | 8.2:+5658593 | MS.gene070278:CDS |
| GCATGGAATGCAGATACCTG+AGG | 0.732347 | 8.2:-5657368 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTACGTAAATAATATAT+AGG | - | chr8.2:5658150-5658169 | None:intergenic | 10.0% |
| !!! | AATAAAACTTTTAAATGATA+GGG | + | chr8.2:5655736-5655755 | MS.gene070278:intron | 10.0% |
| !!! | ATTTAAATTTAAAGTGATAA+TGG | - | chr8.2:5655663-5655682 | None:intergenic | 10.0% |
| !!! | TTTTATTATTATTGATTTTG+AGG | - | chr8.2:5657562-5657581 | None:intergenic | 10.0% |
| !! | AAAAATGAAAAAGGATATAA+AGG | - | chr8.2:5658398-5658417 | None:intergenic | 15.0% |
| !! | AATTGGTCAATAAAAATATA+TGG | - | chr8.2:5654979-5654998 | None:intergenic | 15.0% |
| !! | ACTAGTTAAAGATTAAAAAA+TGG | - | chr8.2:5655938-5655957 | None:intergenic | 15.0% |
| !! | ACTTAAAATTATAATTCTTG+TGG | + | chr8.2:5656456-5656475 | MS.gene070278:intron | 15.0% |
| !! | ATAAAACAAATTATAAATGC+AGG | + | chr8.2:5657576-5657595 | MS.gene070278:intron | 15.0% |
| !! | TATCTCATAATGTATTTATT+TGG | + | chr8.2:5654610-5654629 | MS.gene070278:intron | 15.0% |
| !! | TCAATAAAAATATATGGATT+AGG | - | chr8.2:5654973-5654992 | None:intergenic | 15.0% |
| !! | TCACATTAAAAAAATGAAAA+AGG | - | chr8.2:5658407-5658426 | None:intergenic | 15.0% |
| !! | TTAAACATTTAAAAGTGATA+GGG | - | chr8.2:5655774-5655793 | None:intergenic | 15.0% |
| !!! | ACAAGAATTATAATTTTAAG+TGG | - | chr8.2:5656457-5656476 | None:intergenic | 15.0% |
| !!! | ATATGATTCAATTTTAGATA+TGG | + | chr8.2:5656406-5656425 | MS.gene070278:intron | 15.0% |
| !!! | ATTTTATATGATTAGGATTT+AGG | - | chr8.2:5658184-5658203 | None:intergenic | 15.0% |
| !!! | CAATAAAACTTTTAAATGAT+AGG | + | chr8.2:5655735-5655754 | MS.gene070278:intron | 15.0% |
| !!! | TATTTTGCTGTTATTTATTT+TGG | + | chr8.2:5655631-5655650 | MS.gene070278:intron | 15.0% |
| !!! | TTTGTATTTTGTTTAAAACT+TGG | + | chr8.2:5655392-5655411 | MS.gene070278:intron | 15.0% |
| !! | AAATTAATTTCGATACTTCA+TGG | - | chr8.2:5656240-5656259 | None:intergenic | 20.0% |
| !! | AATAACAGCAAAATACATAA+AGG | - | chr8.2:5655626-5655645 | None:intergenic | 20.0% |
| !! | AATCTTTAACTAGTATCTTA+AGG | + | chr8.2:5655944-5655963 | MS.gene070278:intron | 20.0% |
| !! | AATGTTCTTTATAACATTGA+CGG | + | chr8.2:5657858-5657877 | MS.gene070278:CDS | 20.0% |
| !! | AATTAATTTCGATACTTCAT+GGG | - | chr8.2:5656239-5656258 | None:intergenic | 20.0% |
| !! | AGAAATCTGAATAAGAAATT+TGG | - | chr8.2:5657681-5657700 | None:intergenic | 20.0% |
| !! | AGATCAAATGTAAATTTCAT+AGG | - | chr8.2:5654874-5654893 | None:intergenic | 20.0% |
| !! | ATACATTATGAGATATACAT+TGG | - | chr8.2:5654605-5654624 | None:intergenic | 20.0% |
| !! | ATATTATATTTGCACATGTT+GGG | - | chr8.2:5656527-5656546 | None:intergenic | 20.0% |
| !! | CATATATGTAAATGTTCTAT+CGG | - | chr8.2:5657134-5657153 | None:intergenic | 20.0% |
| !! | CTTAAACATTTAAAAGTGAT+AGG | - | chr8.2:5655775-5655794 | None:intergenic | 20.0% |
| !! | TACTTATTATCTTTGATATG+AGG | + | chr8.2:5656108-5656127 | MS.gene070278:intron | 20.0% |
| !!! | AGATTTTAGGTTCAATTTTA+TGG | - | chr8.2:5655532-5655551 | None:intergenic | 20.0% |
| !!! | AGTTTTATTGTATAAGTGAT+AGG | - | chr8.2:5655725-5655744 | None:intergenic | 20.0% |
| !!! | AGTTTTGTTCTAACTTTAAA+TGG | - | chr8.2:5655478-5655497 | None:intergenic | 20.0% |
| !!! | ATTATTATTGATTTTGAGGA+TGG | - | chr8.2:5657558-5657577 | None:intergenic | 20.0% |
| !!! | CAGCATTATTTTATATGATT+AGG | - | chr8.2:5658191-5658210 | None:intergenic | 20.0% |
| !!! | GTTTTATTGTATAAGTGATA+GGG | - | chr8.2:5655724-5655743 | None:intergenic | 20.0% |
| !!! | TATGCGATTCTTTTTAATTT+AGG | - | chr8.2:5657205-5657224 | None:intergenic | 20.0% |
| !!! | TTGCTGTTATTTATTTTCTT+AGG | + | chr8.2:5655846-5655865 | MS.gene070278:intron | 20.0% |
| ! | AAAATGAAAATGTTCATGCA+TGG | + | chr8.2:5658426-5658445 | MS.gene070278:intron | 25.0% |
| ! | AAACAACTAAGTTAAAAGAC+CGG | - | chr8.2:5655371-5655390 | None:intergenic | 25.0% |
| ! | AAATTATAAATGCAGGTACA+GGG | + | chr8.2:5657583-5657602 | MS.gene070278:intron | 25.0% |
| ! | AAATTTACATTTGATCTGCT+GGG | + | chr8.2:5654877-5654896 | MS.gene070278:intron | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr8.2:5656794-5656813 | None:intergenic | 25.0% |
| ! | AATAGACAACAACAAATCAT+CGG | + | chr8.2:5654729-5654748 | MS.gene070278:CDS | 25.0% |
| ! | ACATATATGTAAAATGCTTG+AGG | - | chr8.2:5656659-5656678 | None:intergenic | 25.0% |
| ! | ATCATATAAAATAATGCTGC+AGG | + | chr8.2:5658192-5658211 | MS.gene070278:intron | 25.0% |
| ! | ATTATAATTCTTGTGGATGA+AGG | + | chr8.2:5656463-5656482 | MS.gene070278:intron | 25.0% |
| ! | CAACATGTGCAAATATAATA+TGG | + | chr8.2:5656526-5656545 | MS.gene070278:intron | 25.0% |
| ! | CAATATGAAATGTGCTAAAT+AGG | + | chr8.2:5658102-5658121 | MS.gene070278:intron | 25.0% |
| ! | CATATTATATTTGCACATGT+TGG | - | chr8.2:5656528-5656547 | None:intergenic | 25.0% |
| ! | GTATCTTAAGGAAAATTGTT+AGG | + | chr8.2:5655956-5655975 | MS.gene070278:intron | 25.0% |
| ! | TATTTGTGTATTTGTAATGC+AGG | + | chr8.2:5654672-5654691 | MS.gene070278:intron | 25.0% |
| ! | TCATATAAAATAATGCTGCA+GGG | + | chr8.2:5658193-5658212 | MS.gene070278:intron | 25.0% |
| ! | TGAGTCACTATAAAATGTTT+AGG | - | chr8.2:5658661-5658680 | None:intergenic | 25.0% |
| ! | TTAAGATGTATCAACATTGT+AGG | + | chr8.2:5655685-5655704 | MS.gene070278:intron | 25.0% |
| !! | ATAAATGCTTATGCTTTGAA+GGG | + | chr8.2:5655990-5656009 | MS.gene070278:intron | 25.0% |
| !! | CAATACCAAAACATGTTTTT+AGG | + | chr8.2:5658368-5658387 | MS.gene070278:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | + | chr8.2:5656811-5656830 | MS.gene070278:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr8.2:5656936-5656955 | None:intergenic | 25.0% |
| !!! | TTAATTTGTTTATACGACCA+TGG | + | chr8.2:5656018-5656037 | MS.gene070278:intron | 25.0% |
| !!! | TTTTGTTTACCAACAAACTT+TGG | - | chr8.2:5657443-5657462 | None:intergenic | 25.0% |
| AAAGACAGTTAAATTTGTGC+AGG | + | chr8.2:5657334-5657353 | MS.gene070278:intron | 30.0% | |
| AAAGCATAAGCATTTATCGT+AGG | - | chr8.2:5655987-5656006 | None:intergenic | 30.0% | |
| AACAACTAAGTTAAAAGACC+GGG | - | chr8.2:5655370-5655389 | None:intergenic | 30.0% | |
| AATTATAAATGCAGGTACAG+GGG | + | chr8.2:5657584-5657603 | MS.gene070278:intron | 30.0% | |
| AATTCCACAACCAATTTATG+GGG | + | chr8.2:5655450-5655469 | MS.gene070278:intron | 30.0% | |
| AGACAATCTTTCTTTGGATT+TGG | + | chr8.2:5657783-5657802 | MS.gene070278:CDS | 30.0% | |
| AGTTAGAACAAAACTCTGTA+TGG | + | chr8.2:5655483-5655502 | MS.gene070278:intron | 30.0% | |
| CAAATTATAAATGCAGGTAC+AGG | + | chr8.2:5657582-5657601 | MS.gene070278:intron | 30.0% | |
| CAATTCCACAACCAATTTAT+GGG | + | chr8.2:5655449-5655468 | MS.gene070278:intron | 30.0% | |
| GAAATTTACATTTGATCTGC+TGG | + | chr8.2:5654876-5654895 | MS.gene070278:intron | 30.0% | |
| GACAATCTTTCTTTGGATTT+GGG | + | chr8.2:5657784-5657803 | MS.gene070278:CDS | 30.0% | |
| GATAAATGCTTATGCTTTGA+AGG | + | chr8.2:5655989-5656008 | MS.gene070278:intron | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | + | chr8.2:5656754-5656773 | MS.gene070278:intron | 30.0% | |
| TAAGTCTCTTCAAGAATGTT+CGG | + | chr8.2:5654797-5654816 | MS.gene070278:CDS | 30.0% | |
| TACACTAGACAATCTTTCTT+TGG | + | chr8.2:5657777-5657796 | MS.gene070278:CDS | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | - | chr8.2:5656747-5656766 | None:intergenic | 30.0% | |
| TGGATTTGAATTGTGAAAAC+CGG | + | chr8.2:5654630-5654649 | MS.gene070278:intron | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr8.2:5656750-5656769 | None:intergenic | 30.0% | |
| TTAGAGAAAGAGAGTCAAAA+GGG | + | chr8.2:5658623-5658642 | MS.gene070278:CDS | 30.0% | |
| TTATAACATTGACGGTCATT+GGG | + | chr8.2:5657866-5657885 | MS.gene070278:CDS | 30.0% | |
| TTGCTAAACAACATCAACAA+TGG | + | chr8.2:5655139-5655158 | MS.gene070278:CDS | 30.0% | |
| TTTATAACATTGACGGTCAT+TGG | + | chr8.2:5657865-5657884 | MS.gene070278:CDS | 30.0% | |
| ! | ATTGGTTCCCTCAAATTAAT+CGG | - | chr8.2:5655433-5655452 | None:intergenic | 30.0% |
| ! | ATTTAGGATACGATACAACT+AGG | - | chr8.2:5657189-5657208 | None:intergenic | 30.0% |
| ! | CCAATAACCGATTAATTTGA+GGG | + | chr8.2:5655423-5655442 | MS.gene070278:intron | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr8.2:5656789-5656808 | MS.gene070278:intron | 30.0% |
| ! | GATCACCTAAAAACATGTTT+TGG | - | chr8.2:5658376-5658395 | None:intergenic | 30.0% |
| ! | TCCAATAACCGATTAATTTG+AGG | + | chr8.2:5655422-5655441 | MS.gene070278:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr8.2:5656940-5656959 | MS.gene070278:intron | 30.0% |
| !! | ACACTCTAAAACAATACATC+AGG | - | chr8.2:5658487-5658506 | None:intergenic | 30.0% |
| !! | AGTACTTGCTGTAATGTATT+TGG | - | chr8.2:5654778-5654797 | None:intergenic | 30.0% |
| !! | ATTCATGCCAACTGTTTTAA+AGG | + | chr8.2:5655572-5655591 | MS.gene070278:intron | 30.0% |
| !! | CACTCTAAAACAATACATCA+GGG | - | chr8.2:5658486-5658505 | None:intergenic | 30.0% |
| !! | TTCATGCCAACTGTTTTAAA+GGG | + | chr8.2:5655573-5655592 | MS.gene070278:intron | 30.0% |
| !! | TTTTGAGGATGGAAAAGTTT+TGG | - | chr8.2:5657547-5657566 | None:intergenic | 30.0% |
| !!! | AGATTTTACAAGAAGTGTTC+CGG | - | chr8.2:5654652-5654671 | None:intergenic | 30.0% |
| !!! | ATGCAAAAGAAGTGTTTTCT+GGG | + | chr8.2:5658264-5658283 | MS.gene070278:CDS | 30.0% |
| !!! | CAATTTTATGGTGTCGATTT+TGG | - | chr8.2:5655520-5655539 | None:intergenic | 30.0% |
| !!! | TGCGCTTTTTTCAAGATTTT+AGG | - | chr8.2:5655545-5655564 | None:intergenic | 30.0% |
| AACAAATCATCGGATTCTGA+TGG | + | chr8.2:5654739-5654758 | MS.gene070278:CDS | 35.0% | |
| AAGAAGAGTAGATCAAATGG+CGG | - | chr8.2:5656866-5656885 | None:intergenic | 35.0% | |
| ACAAATCATCGGATTCTGAT+GGG | + | chr8.2:5654740-5654759 | MS.gene070278:CDS | 35.0% | |
| ACCTCTAGATCCTTAACAAA+AGG | - | chr8.2:5658299-5658318 | None:intergenic | 35.0% | |
| ACTGTTCACCAATTCAAAAG+TGG | + | chr8.2:5658701-5658720 | MS.gene070278:CDS | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | chr8.2:5656999-5657018 | None:intergenic | 35.0% | |
| AGAGTCAAAAGGGGAAATTT+GGG | + | chr8.2:5658633-5658652 | MS.gene070278:CDS | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr8.2:5656782-5656801 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr8.2:5656947-5656966 | None:intergenic | 35.0% | |
| ATCTTTCTTTGGATTTGGGT+CGG | + | chr8.2:5657788-5657807 | MS.gene070278:CDS | 35.0% | |
| CATATGTCTCTCCATGATTA+TGG | - | chr8.2:5657647-5657666 | None:intergenic | 35.0% | |
| CCAATTCCACAACCAATTTA+TGG | + | chr8.2:5655448-5655467 | MS.gene070278:intron | 35.0% | |
| CCATAAATTGGTTGTGGAAT+TGG | - | chr8.2:5655451-5655470 | None:intergenic | 35.0% | |
| CCCTCAAATTAATCGGTTAT+TGG | - | chr8.2:5655426-5655445 | None:intergenic | 35.0% | |
| CTGTTCACCAATTCAAAAGT+GGG | + | chr8.2:5658702-5658721 | MS.gene070278:CDS | 35.0% | |
| CTTAGAGAAAGAGAGTCAAA+AGG | + | chr8.2:5658622-5658641 | MS.gene070278:CDS | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr8.2:5656922-5656941 | None:intergenic | 35.0% | |
| GAAATATCTTTGCGTATCTG+TGG | - | chr8.2:5656304-5656323 | None:intergenic | 35.0% | |
| GAAATCGAAGACGGATAAAA+GGG | + | chr8.2:5657811-5657830 | MS.gene070278:CDS | 35.0% | |
| GACTTATATCAGTTGTAGCA+TGG | + | chr8.2:5655179-5655198 | MS.gene070278:CDS | 35.0% | |
| GATCCTTAACAAAAGGAGTA+TGG | - | chr8.2:5658292-5658311 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr8.2:5656869-5656888 | None:intergenic | 35.0% | |
| GTATCCTAGAAAAAGACGAA+GGG | + | chr8.2:5656343-5656362 | MS.gene070278:intron | 35.0% | |
| TAGAGAAAGAGAGTCAAAAG+GGG | + | chr8.2:5658624-5658643 | MS.gene070278:CDS | 35.0% | |
| TCAGGGTAATAGTCACATAT+GGG | + | chr8.2:5656043-5656062 | MS.gene070278:intron | 35.0% | |
| TGGAATATCGGTATCTGATA+CGG | - | chr8.2:5656202-5656221 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr8.2:5656927-5656946 | None:intergenic | 35.0% | |
| TGTCATATCAAGTGTCCATA+CGG | - | chr8.2:5657975-5657994 | None:intergenic | 35.0% | |
| TTAAATGGAGCCCCATAAAT+TGG | - | chr8.2:5655463-5655482 | None:intergenic | 35.0% | |
| TTCAGATTTCTTCCAATTCC+TGG | + | chr8.2:5657690-5657709 | MS.gene070278:CDS | 35.0% | |
| TTCAGGGTAATAGTCACATA+TGG | + | chr8.2:5656042-5656061 | MS.gene070278:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr8.2:5656870-5656889 | MS.gene070278:intron | 35.0% | |
| TTTCATATTGAAGACGCATC+TGG | - | chr8.2:5658092-5658111 | None:intergenic | 35.0% | |
| ! | AAACCCACCATGTTTCTAAA+GGG | + | chr8.2:5655263-5655282 | MS.gene070278:CDS | 35.0% |
| ! | AACAGAATCTGCTCTTGTTT+GGG | + | chr8.2:5658513-5658532 | MS.gene070278:CDS | 35.0% |
| ! | AATCTTGAAAAAAGCGCACT+CGG | + | chr8.2:5655547-5655566 | MS.gene070278:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr8.2:5656770-5656789 | None:intergenic | 35.0% |
| ! | TAAGGTTCCCTTTAGAAACA+TGG | - | chr8.2:5655273-5655292 | None:intergenic | 35.0% |
| ! | TATGTTTTCCATCTGATCAG+TGG | - | chr8.2:5657393-5657412 | None:intergenic | 35.0% |
| ! | TCCTTTTGTTAAGGATCTAG+AGG | + | chr8.2:5658295-5658314 | MS.gene070278:CDS | 35.0% |
| ! | TTACCAACAAACTTTGGAAG+TGG | - | chr8.2:5657437-5657456 | None:intergenic | 35.0% |
| ! | TTTACCCTTCGTCTTTTTCT+AGG | - | chr8.2:5656350-5656369 | None:intergenic | 35.0% |
| !! | ATGAGACCCTTTAAAACAGT+TGG | - | chr8.2:5655582-5655601 | None:intergenic | 35.0% |
| !! | CTTTTGACTCTCTTTCTCTA+AGG | - | chr8.2:5658624-5658643 | None:intergenic | 35.0% |
| !! | GCATATATATCAAGCACTGA+CGG | + | chr8.2:5657949-5657968 | MS.gene070278:intron | 35.0% |
| !! | TCCAATTCCTGGTATTGATT+GGG | + | chr8.2:5657701-5657720 | MS.gene070278:CDS | 35.0% |
| !! | TTCCAATTCCTGGTATTGAT+TGG | + | chr8.2:5657700-5657719 | MS.gene070278:CDS | 35.0% |
| !!! | GATGCAAAAGAAGTGTTTTC+TGG | + | chr8.2:5658263-5658282 | MS.gene070278:CDS | 35.0% |
| !!! | TTTATGGTGTCGATTTTGGT+TGG | - | chr8.2:5655516-5655535 | None:intergenic | 35.0% |
| AAAAAACTTGTGGTCCCACT+TGG | - | chr8.2:5655342-5655361 | None:intergenic | 40.0% | |
| AAGCCATCATAAGCAACGAT+TGG | + | chr8.2:5658548-5658567 | MS.gene070278:CDS | 40.0% | |
| AAGTCACAGCTTCAATGGTA+TGG | + | chr8.2:5655082-5655101 | MS.gene070278:CDS | 40.0% | |
| AATCGTTGCTTATGATGGCT+TGG | - | chr8.2:5658549-5658568 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | - | chr8.2:5656972-5656991 | None:intergenic | 40.0% | |
| ACCCAATCAATACCAGGAAT+TGG | - | chr8.2:5657705-5657724 | None:intergenic | 40.0% | |
| ACCGATATTCCACAGATAGT+CGG | + | chr8.2:5656210-5656229 | MS.gene070278:intron | 40.0% | |
| ACTACACGACCACAGAAATT+TGG | + | chr8.2:5655211-5655230 | MS.gene070278:CDS | 40.0% | |
| ACTTCTCAGCATATAGTGTG+CGG | + | chr8.2:5654931-5654950 | MS.gene070278:intron | 40.0% | |
| AGCCATCATAAGCAACGATT+GGG | + | chr8.2:5658549-5658568 | MS.gene070278:CDS | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr8.2:5656841-5656860 | None:intergenic | 40.0% | |
| ATCTGGTATCCGACATTGAT+AGG | - | chr8.2:5658075-5658094 | None:intergenic | 40.0% | |
| ATGTCTCTCCATGATTATGG+AGG | - | chr8.2:5657644-5657663 | None:intergenic | 40.0% | |
| CAAACAAGAGCAGATTCTGT+TGG | - | chr8.2:5658514-5658533 | None:intergenic | 40.0% | |
| CAACAGAATCTGCTCTTGTT+TGG | + | chr8.2:5658512-5658531 | MS.gene070278:CDS | 40.0% | |
| CGTATCCTAGAAAAAGACGA+AGG | + | chr8.2:5656342-5656361 | MS.gene070278:intron | 40.0% | |
| CTCTTCAAGAATGTTCGGTT+AGG | + | chr8.2:5654802-5654821 | MS.gene070278:CDS | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | - | chr8.2:5656973-5656992 | None:intergenic | 40.0% | |
| GAGAGTCAAAAGGGGAAATT+TGG | + | chr8.2:5658632-5658651 | MS.gene070278:CDS | 40.0% | |
| GGAAATCGAAGACGGATAAA+AGG | + | chr8.2:5657810-5657829 | MS.gene070278:CDS | 40.0% | |
| GGAATATCGGTATCTGATAC+GGG | - | chr8.2:5656201-5656220 | None:intergenic | 40.0% | |
| GGAGCAAATCCAAATTTCTG+TGG | - | chr8.2:5655223-5655242 | None:intergenic | 40.0% | |
| GTGACTCATACCAATGAAGA+TGG | + | chr8.2:5658673-5658692 | MS.gene070278:CDS | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | chr8.2:5657005-5657024 | None:intergenic | 40.0% | |
| TACATTTGATCTGCTGGGAT+GGG | + | chr8.2:5654882-5654901 | MS.gene070278:intron | 40.0% | |
| TACCATTGAAGCTGTGACTT+AGG | - | chr8.2:5655082-5655101 | None:intergenic | 40.0% | |
| TCACCAAGAATGGGATTGTA+GGG | - | chr8.2:5655244-5655263 | None:intergenic | 40.0% | |
| TCATGTCCACTCAATAGTGT+TGG | + | chr8.2:5657281-5657300 | MS.gene070278:intron | 40.0% | |
| TCCGACTATCTGTGGAATAT+CGG | - | chr8.2:5656214-5656233 | None:intergenic | 40.0% | |
| TCTCCACTTCCAAAGTTTGT+TGG | + | chr8.2:5657431-5657450 | MS.gene070278:CDS | 40.0% | |
| TCTTTCTTTGGATTTGGGTC+GGG | + | chr8.2:5657789-5657808 | MS.gene070278:CDS | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | - | chr8.2:5656974-5656993 | None:intergenic | 40.0% | |
| TGATAGGACAGTGACACATA+TGG | - | chr8.2:5658059-5658078 | None:intergenic | 40.0% | |
| TGCTGAGAAGTGAAGAATTG+CGG | - | chr8.2:5654922-5654941 | None:intergenic | 40.0% | |
| TGTCACTGTCCTATCAATGT+CGG | + | chr8.2:5658063-5658082 | MS.gene070278:intron | 40.0% | |
| TTACATTTGATCTGCTGGGA+TGG | + | chr8.2:5654881-5654900 | MS.gene070278:intron | 40.0% | |
| TTCACCAAGAATGGGATTGT+AGG | - | chr8.2:5655245-5655264 | None:intergenic | 40.0% | |
| TTGTTGTCTATTGTTGCGAG+TGG | - | chr8.2:5654721-5654740 | None:intergenic | 40.0% | |
| TTTATACGACCATGGCTTCA+GGG | + | chr8.2:5656026-5656045 | MS.gene070278:intron | 40.0% | |
| TTTGTGCCAACACTATTGAG+TGG | - | chr8.2:5657290-5657309 | None:intergenic | 40.0% | |
| ! | ACAGAATCTGCTCTTGTTTG+GGG | + | chr8.2:5658514-5658533 | MS.gene070278:CDS | 40.0% |
| ! | GAAACCCACCATGTTTCTAA+AGG | + | chr8.2:5655262-5655281 | MS.gene070278:CDS | 40.0% |
| ! | GCTCCATACTCCTTTTGTTA+AGG | + | chr8.2:5658286-5658305 | MS.gene070278:CDS | 40.0% |
| ! | GTTCCCTTTAGAAACATGGT+GGG | - | chr8.2:5655269-5655288 | None:intergenic | 40.0% |
| !! | ATTCCTGGTATTGATTGGGT+TGG | + | chr8.2:5657705-5657724 | MS.gene070278:CDS | 40.0% |
| !! | TTTGGGACCCACTTTTGAAT+TGG | - | chr8.2:5658712-5658731 | None:intergenic | 40.0% |
| AACGCCTTATCCCACTAAGT+GGG | + | chr8.2:5656700-5656719 | MS.gene070278:intron | 45.0% | |
| ACAGTTCCAGCCATCTTCAT+TGG | - | chr8.2:5658686-5658705 | None:intergenic | 45.0% | |
| ACATTGACGGTCATTGGGAT+AGG | + | chr8.2:5657871-5657890 | MS.gene070278:CDS | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr8.2:5657100-5657119 | None:intergenic | 45.0% | |
| ATCTGATCTGTCACGCTTCA+AGG | + | chr8.2:5654825-5654844 | MS.gene070278:CDS | 45.0% | |
| ATTCCATGCCACTGATCAGA+TGG | + | chr8.2:5657382-5657401 | MS.gene070278:CDS | 45.0% | |
| CAACTGCACCTCCATAATCA+TGG | + | chr8.2:5657633-5657652 | MS.gene070278:CDS | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | - | chr8.2:5656971-5656990 | None:intergenic | 45.0% | |
| CCACTTGGAACACGAACAAT+GGG | - | chr8.2:5655327-5655346 | None:intergenic | 45.0% | |
| CCATTGTTCGTGTTCCAAGT+GGG | + | chr8.2:5655325-5655344 | MS.gene070278:intron | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr8.2:5657052-5657071 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr8.2:5657055-5657074 | MS.gene070278:intron | 45.0% | |
| CTCATACCAATGAAGATGGC+TGG | + | chr8.2:5658677-5658696 | MS.gene070278:CDS | 45.0% | |
| CTGTGACTTAGGCATGTTGA+AGG | - | chr8.2:5655071-5655090 | None:intergenic | 45.0% | |
| GACTTAGGCATGTTGAAGGT+AGG | - | chr8.2:5655067-5655086 | None:intergenic | 45.0% | |
| GCCATCATAAGCAACGATTG+GGG | + | chr8.2:5658550-5658569 | MS.gene070278:CDS | 45.0% | |
| GCTGAGAAGTGAAGAATTGC+GGG | - | chr8.2:5654921-5654940 | None:intergenic | 45.0% | |
| GGAACACGAACAATGGGAAA+AGG | - | chr8.2:5655321-5655340 | None:intergenic | 45.0% | |
| GGTTTGGACATGTAGAGAGA+AGG | - | chr8.2:5656906-5656925 | None:intergenic | 45.0% | |
| GTTTAGCAAGTCTACTCCTG+TGG | - | chr8.2:5655128-5655147 | None:intergenic | 45.0% | |
| GTTTATACGACCATGGCTTC+AGG | + | chr8.2:5656025-5656044 | MS.gene070278:intron | 45.0% | |
| TCCCCAATCGTTGCTTATGA+TGG | - | chr8.2:5658554-5658573 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr8.2:5657096-5657115 | MS.gene070278:intron | 45.0% | |
| TGACTATTACCCTGAAGCCA+TGG | - | chr8.2:5656038-5656057 | None:intergenic | 45.0% | |
| TGAGGAAATCCACTCAACAG+TGG | + | chr8.2:5656126-5656145 | MS.gene070278:intron | 45.0% | |
| TGCCTAAGTCACAGCTTCAA+TGG | + | chr8.2:5655077-5655096 | MS.gene070278:CDS | 45.0% | |
| TGTAGCTCAATTCTGCTACC+AGG | - | chr8.2:5657761-5657780 | None:intergenic | 45.0% | |
| TGTGTATATTCCACAGCCAC+AGG | + | chr8.2:5655109-5655128 | MS.gene070278:CDS | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr8.2:5657092-5657111 | None:intergenic | 45.0% | |
| TTAGGCATGTTGAAGGTAGG+TGG | - | chr8.2:5655064-5655083 | None:intergenic | 45.0% | |
| TTGAGTGGACATGAGTACTC+TGG | - | chr8.2:5657275-5657294 | None:intergenic | 45.0% | |
| TTGCCAACCCAATCAATACC+AGG | - | chr8.2:5657711-5657730 | None:intergenic | 45.0% | |
| TTTCCATCTGATCAGTGGCA+TGG | - | chr8.2:5657388-5657407 | None:intergenic | 45.0% | |
| ! | CAAACTTTGGAAGTGGAGAG+TGG | - | chr8.2:5657430-5657449 | None:intergenic | 45.0% |
| ! | GGTTCCCTTTAGAAACATGG+TGG | - | chr8.2:5655270-5655289 | None:intergenic | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr8.2:5657091-5657110 | None:intergenic | 45.0% |
| ! | TTGGAGTATCCGGACTTCAT+AGG | - | chr8.2:5656166-5656185 | None:intergenic | 45.0% |
| !! | ATGGTGGGTTTCACCAAGAA+TGG | - | chr8.2:5655254-5655273 | None:intergenic | 45.0% |
| !! | TGGTGGGTTTCACCAAGAAT+GGG | - | chr8.2:5655253-5655272 | None:intergenic | 45.0% |
| !!! | CCACAAGTTTTTTCGTCACC+CGG | + | chr8.2:5655349-5655368 | MS.gene070278:intron | 45.0% |
| !!! | AAAATAAATTCATTTTTAAT+TGG | - | chr8.2:5654996-5655015 | None:intergenic | 5.0% |
| ACGCCTTATCCCACTAAGTG+GGG | + | chr8.2:5656701-5656720 | MS.gene070278:intron | 50.0% | |
| ACTATCCGGTGCCTAGAAAC+AGG | + | chr8.2:5657735-5657754 | MS.gene070278:CDS | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr8.2:5657024-5657043 | None:intergenic | 50.0% | |
| ATACGGGTACGATACGTACG+GGG | - | chr8.2:5657235-5657254 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | + | chr8.2:5656699-5656718 | MS.gene070278:intron | 50.0% | |
| CAAGCCACTCCTATGAAGTC+CGG | + | chr8.2:5656154-5656173 | MS.gene070278:intron | 50.0% | |
| CATGGGTATCCGACTATCTG+TGG | - | chr8.2:5656222-5656241 | None:intergenic | 50.0% | |
| CCCACTTGGAACACGAACAA+TGG | - | chr8.2:5655328-5655347 | None:intergenic | 50.0% | |
| CCCATTGTTCGTGTTCCAAG+TGG | + | chr8.2:5655324-5655343 | MS.gene070278:intron | 50.0% | |
| CCGGGTGACGAAAAAACTTG+TGG | - | chr8.2:5655352-5655371 | None:intergenic | 50.0% | |
| CCTGTTCGAGCAAGACGTTA+AGG | - | chr8.2:5655291-5655310 | None:intergenic | 50.0% | |
| CCTTAACGTCTTGCTCGAAC+AGG | + | chr8.2:5655288-5655307 | MS.gene070278:CDS | 50.0% | |
| CGATTGGGGAAAAGCAAGAG+AGG | + | chr8.2:5658564-5658583 | MS.gene070278:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr8.2:5656705-5656724 | MS.gene070278:intron | 50.0% | |
| CTTGTGACACCACTGTTGAG+TGG | - | chr8.2:5656138-5656157 | None:intergenic | 50.0% | |
| GAAGTCCGGATACTCCAAGA+CGG | + | chr8.2:5656168-5656187 | MS.gene070278:intron | 50.0% | |
| GATACGGGTACGATACGTAC+GGG | - | chr8.2:5657236-5657255 | None:intergenic | 50.0% | |
| GCATGGAATGCAGATACCTG+AGG | - | chr8.2:5657371-5657390 | None:intergenic | 50.0% | |
| GCGGAGAGTCAGGTTAAAAG+AGG | - | chr8.2:5656847-5656866 | None:intergenic | 50.0% | |
| GCTCCCTACAATCCCATTCT+TGG | + | chr8.2:5655238-5655257 | MS.gene070278:CDS | 50.0% | |
| GGAATGCAGATACCTGAGGA+TGG | - | chr8.2:5657367-5657386 | None:intergenic | 50.0% | |
| GGAGCCCCATAAATTGGTTG+TGG | - | chr8.2:5655457-5655476 | None:intergenic | 50.0% | |
| GGATACGGGTACGATACGTA+CGG | - | chr8.2:5657237-5657256 | None:intergenic | 50.0% | |
| GGGGTAGAAGTTGACATGCA+TGG | + | chr8.2:5657603-5657622 | MS.gene070278:CDS | 50.0% | |
| GTACGTATCGTACCCGTATC+CGG | + | chr8.2:5657236-5657255 | MS.gene070278:intron | 50.0% | |
| GTATCCGGACTTCATAGGAG+TGG | - | chr8.2:5656161-5656180 | None:intergenic | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr8.2:5657105-5657124 | None:intergenic | 50.0% | |
| GTGGATGAAGGTAACGAGAG+AGG | + | chr8.2:5656475-5656494 | MS.gene070278:intron | 50.0% | |
| TACGTATCGTACCCGTATCC+GGG | + | chr8.2:5657237-5657256 | MS.gene070278:intron | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | + | chr8.2:5656879-5656898 | MS.gene070278:intron | 50.0% | |
| TTGAAGGTAGGTGGTAGCTG+TGG | - | chr8.2:5655055-5655074 | None:intergenic | 50.0% | |
| TTGCTATGAAGCCCGGATAC+GGG | - | chr8.2:5657251-5657270 | None:intergenic | 50.0% | |
| TTGGGTCGGGAAATCGAAGA+CGG | + | chr8.2:5657802-5657821 | MS.gene070278:CDS | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr8.2:5657044-5657063 | None:intergenic | 50.0% |
| ! | AGATCAAATGGCGGAGAGTC+AGG | - | chr8.2:5656857-5656876 | None:intergenic | 50.0% |
| ! | CTTGCTATGAAGCCCGGATA+CGG | - | chr8.2:5657252-5657271 | None:intergenic | 50.0% |
| ! | GGGTTGGCAATGTCACTATC+CGG | + | chr8.2:5657721-5657740 | MS.gene070278:CDS | 50.0% |
| !! | AGGGTGGCAATAGGAGCATT+TGG | - | chr8.2:5658730-5658749 | None:intergenic | 50.0% |
| !! | GGGTGGCAATAGGAGCATTT+GGG | - | chr8.2:5658729-5658748 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr8.2:5656713-5656732 | MS.gene070278:intron | 55.0% | |
| ATACGGGTACGTCTCCGTCT+TGG | - | chr8.2:5656185-5656204 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr8.2:5656714-5656733 | None:intergenic | 55.0% | |
| CAAGTCTACTCCTGTGGCTG+TGG | - | chr8.2:5655122-5655141 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr8.2:5656707-5656726 | None:intergenic | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr8.2:5657032-5657051 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr8.2:5657118-5657137 | None:intergenic | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | + | chr8.2:5656880-5656899 | MS.gene070278:intron | 55.0% | |
| GCAGGTTTCACACCATCCTC+AGG | + | chr8.2:5657352-5657371 | MS.gene070278:intron | 55.0% | |
| GTACGATACGTACGGGGATG+CGG | - | chr8.2:5657229-5657248 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr8.2:5656713-5656732 | None:intergenic | 55.0% | |
| ! | CGTCTCCGTCTTGGAGTATC+CGG | - | chr8.2:5656176-5656195 | None:intergenic | 55.0% |
| ! | CTGCTACCAGGCCTGTTTCT+AGG | - | chr8.2:5657749-5657768 | None:intergenic | 55.0% |
| !! | ATCAAGCACTGACGGCCGTA+TGG | + | chr8.2:5657957-5657976 | MS.gene070278:intron | 55.0% |
| !! | CTCTGGCTTGCTATGAAGCC+CGG | - | chr8.2:5657258-5657277 | None:intergenic | 55.0% |
| !! | CCAGGCCTGTTTCTAGGCAC+CGG | - | chr8.2:5657743-5657762 | None:intergenic | 60.0% |
| CCGGTGCCTAGAAACAGGCC+TGG | + | chr8.2:5657740-5657759 | MS.gene070278:CDS | 65.0% | |
| GAGAAGGCCCGTAGACGCCG+TGG | - | chr8.2:5656890-5656909 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 5654595 | 5658753 | 5654595 | ID=MS.gene070278 |
| chr8.2 | mRNA | 5654595 | 5658753 | 5654595 | ID=MS.gene070278.t1;Parent=MS.gene070278 |
| chr8.2 | exon | 5654595 | 5654606 | 5654595 | ID=MS.gene070278.t1.exon1;Parent=MS.gene070278.t1 |
| chr8.2 | CDS | 5654595 | 5654606 | 5654595 | ID=cds.MS.gene070278.t1;Parent=MS.gene070278.t1 |
| chr8.2 | exon | 5654694 | 5654846 | 5654694 | ID=MS.gene070278.t1.exon2;Parent=MS.gene070278.t1 |
| chr8.2 | CDS | 5654694 | 5654846 | 5654694 | ID=cds.MS.gene070278.t1;Parent=MS.gene070278.t1 |
| chr8.2 | exon | 5655058 | 5655309 | 5655058 | ID=MS.gene070278.t1.exon3;Parent=MS.gene070278.t1 |
| chr8.2 | CDS | 5655058 | 5655309 | 5655058 | ID=cds.MS.gene070278.t1;Parent=MS.gene070278.t1 |
| chr8.2 | exon | 5657356 | 5657452 | 5657356 | ID=MS.gene070278.t1.exon4;Parent=MS.gene070278.t1 |
| chr8.2 | CDS | 5657356 | 5657452 | 5657356 | ID=cds.MS.gene070278.t1;Parent=MS.gene070278.t1 |
| chr8.2 | exon | 5657598 | 5657892 | 5657598 | ID=MS.gene070278.t1.exon5;Parent=MS.gene070278.t1 |
| chr8.2 | CDS | 5657598 | 5657892 | 5657598 | ID=cds.MS.gene070278.t1;Parent=MS.gene070278.t1 |
| chr8.2 | exon | 5658214 | 5658316 | 5658214 | ID=MS.gene070278.t1.exon6;Parent=MS.gene070278.t1 |
| chr8.2 | CDS | 5658214 | 5658316 | 5658214 | ID=cds.MS.gene070278.t1;Parent=MS.gene070278.t1 |
| chr8.2 | exon | 5658502 | 5658753 | 5658502 | ID=MS.gene070278.t1.exon7;Parent=MS.gene070278.t1 |
| chr8.2 | CDS | 5658502 | 5658753 | 5658502 | ID=cds.MS.gene070278.t1;Parent=MS.gene070278.t1 |
| Gene Sequence |
| Protein sequence |
