Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071221.t1 | XP_003616688.1 | 95.5 | 245 | 11 | 0 | 1 | 245 | 1 | 245 | 2.10E-136 | 495 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071221.t1 | O82225 | 48.8 | 240 | 119 | 1 | 7 | 242 | 6 | 245 | 6.6e-67 | 255.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071221.t1 | G7K286 | 95.5 | 245 | 11 | 0 | 1 | 245 | 1 | 245 | 1.5e-136 | 495.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071221 | MS.gene002251 | PPI |
| MS.gene071221 | MS.gene90232 | PPI |
| MS.gene071221 | MS.gene053590 | PPI |
| MS.gene071221 | MS.gene02208 | PPI |
| MS.gene071221 | MS.gene068013 | PPI |
| MS.gene76089 | MS.gene071221 | PPI |
| MS.gene071221 | MS.gene028495 | PPI |
| MS.gene071221 | MS.gene94216 | PPI |
| MS.gene071221 | MS.gene01224 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071221.t1 | MTR_5g083210 | 95.510 | 245 | 11 | 0 | 1 | 245 | 1 | 245 | 2.30e-177 | 487 |
| MS.gene071221.t1 | MTR_4g093250 | 72.289 | 249 | 65 | 2 | 1 | 245 | 1 | 249 | 4.97e-122 | 348 |
| MS.gene071221.t1 | MTR_2g009720 | 59.917 | 242 | 96 | 1 | 1 | 242 | 2 | 242 | 9.55e-101 | 293 |
| MS.gene071221.t1 | MTR_2g009720 | 60.377 | 212 | 83 | 1 | 1 | 212 | 2 | 212 | 7.08e-87 | 258 |
| MS.gene071221.t1 | MTR_5g078650 | 69.231 | 52 | 16 | 0 | 38 | 89 | 49 | 100 | 7.09e-16 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071221.t1 | AT2G23970 | 48.548 | 241 | 120 | 1 | 6 | 242 | 5 | 245 | 4.90e-84 | 251 |
| MS.gene071221.t1 | AT4G30550 | 44.813 | 241 | 128 | 1 | 7 | 242 | 8 | 248 | 2.63e-77 | 234 |
| MS.gene071221.t1 | AT4G30540 | 47.059 | 238 | 124 | 1 | 7 | 242 | 6 | 243 | 7.84e-75 | 228 |
| MS.gene071221.t1 | AT4G30530 | 41.079 | 241 | 138 | 1 | 6 | 242 | 4 | 244 | 1.53e-68 | 211 |
| MS.gene071221.t1 | AT2G23960 | 41.909 | 241 | 136 | 1 | 6 | 242 | 4 | 244 | 5.34e-68 | 210 |
| MS.gene071221.t1 | AT2G23960 | 43.458 | 214 | 117 | 1 | 6 | 215 | 4 | 217 | 1.25e-60 | 190 |
Find 60 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATGCATGGAGGGTATTT+TGG | 0.139894 | 5.1:-65488813 | MS.gene071221:CDS |
| TAAATATGGAGATCATATTT+TGG | 0.165205 | 5.1:-65485305 | MS.gene071221:CDS |
| CTACGTGATAATGGAGAAAA+TGG | 0.180350 | 5.1:-65488889 | None:intergenic |
| CTCTTCCAGGCATTTGTATC+TGG | 0.247583 | 5.1:+65483296 | None:intergenic |
| AAAATCCTTGGCATTTGTTT+TGG | 0.269092 | 5.1:-65488591 | MS.gene071221:CDS |
| GGAATTGAGATGTTTAAATA+TGG | 0.288117 | 5.1:-65485319 | MS.gene071221:CDS |
| AAATCCATTCTTGAGAAAAC+TGG | 0.336448 | 5.1:+65483265 | None:intergenic |
| ACTGGTGCAAAGTCTCTTCC+AGG | 0.383119 | 5.1:+65483283 | None:intergenic |
| TCGATTATAGAAAGCTTTGT+TGG | 0.391349 | 5.1:+65485518 | None:intergenic |
| AAAATGGGTTCGAAGAGATT+TGG | 0.394261 | 5.1:-65488873 | MS.gene071221:CDS |
| GGTAGTTGCAATGATGCTTA+TGG | 0.400890 | 5.1:-65488675 | MS.gene071221:CDS |
| AAGGTACTTGGCCGTGCATT+GGG | 0.412227 | 5.1:-65485632 | MS.gene071221:CDS |
| ATGCTTATGGAAATGAGAAA+TGG | 0.439165 | 5.1:-65488662 | MS.gene071221:CDS |
| TGGGGTATTCTTGAAAATGT+TGG | 0.442512 | 5.1:-65488793 | MS.gene071221:CDS |
| CCGTGCATTGGGAGGAAAGG+TGG | 0.444436 | 5.1:-65485621 | MS.gene071221:CDS |
| TTTGGGAATTCAAGGTCATC+CGG | 0.454621 | 5.1:-65485287 | MS.gene071221:CDS |
| TCTCCTACTGGTTGGGACAT+TGG | 0.456529 | 5.1:-65485593 | MS.gene071221:CDS |
| TAAGGTACTTGGCCGTGCAT+TGG | 0.466217 | 5.1:-65485633 | MS.gene071221:intron |
| GGGTCGCTCTCCTACTGGTT+GGG | 0.466637 | 5.1:-65485600 | MS.gene071221:CDS |
| AGACTCAACTCATCATCCTT+AGG | 0.471374 | 5.1:+65488720 | None:intergenic |
| ATCATGTTTGATAAGGTACT+TGG | 0.487889 | 5.1:-65485644 | MS.gene071221:intron |
| GCAATTACCTCTGCCTTAGC+AGG | 0.488420 | 5.1:+65485358 | None:intergenic |
| TATGATGGGTTTGTGATCAC+TGG | 0.491412 | 5.1:-65488696 | MS.gene071221:CDS |
| TTGCTATAGGAGCAAGGGAG+AGG | 0.492692 | 5.1:-65483334 | MS.gene071221:CDS |
| TTTCTATAATCGAATGTCAC+AGG | 0.494866 | 5.1:-65485508 | MS.gene071221:CDS |
| TGGTGTGTTGTTATGTGCTG+AGG | 0.501318 | 5.1:-65488853 | MS.gene071221:CDS |
| AAGGTGGGTCGCTCTCCTAC+TGG | 0.509740 | 5.1:-65485605 | MS.gene071221:CDS |
| GATGAGTTGAGTCTTTATGA+TGG | 0.518930 | 5.1:-65488711 | MS.gene071221:CDS |
| GATACAAGAGTTACCTGCTA+AGG | 0.520008 | 5.1:-65485371 | MS.gene071221:CDS |
| TGGGTCGCTCTCCTACTGGT+TGG | 0.526632 | 5.1:-65485601 | MS.gene071221:CDS |
| GGTATTCTTGAAAATGTTGG+AGG | 0.537016 | 5.1:-65488790 | MS.gene071221:CDS |
| ATGAGTTGAGTCTTTATGAT+GGG | 0.544846 | 5.1:-65488710 | MS.gene071221:CDS |
| TGCTATAGGAGCAAGGGAGA+GGG | 0.545447 | 5.1:-65483333 | MS.gene071221:CDS |
| CGTGCATTGGGAGGAAAGGT+GGG | 0.545529 | 5.1:-65485620 | MS.gene071221:CDS |
| ATTGCTAGGTCAGATAAGAC+TGG | 0.554445 | 5.1:-65485340 | MS.gene071221:CDS |
| TAGAGCCAGATACAAATGCC+TGG | 0.563834 | 5.1:-65483301 | MS.gene071221:CDS |
| TTCATGTGGAGAGTTTCCTA+AGG | 0.566836 | 5.1:-65488736 | MS.gene071221:CDS |
| AATCGAATGTCACAGGGATG+AGG | 0.572822 | 5.1:-65485501 | MS.gene071221:intron |
| GAAGGGAAACAAATATGTGA+TGG | 0.575220 | 5.1:+65485551 | None:intergenic |
| CATCCAACGTAATTTCATCA+AGG | 0.575767 | 5.1:-65485224 | MS.gene071221:intron |
| TACGTGATAATGGAGAAAAT+GGG | 0.581288 | 5.1:-65488888 | None:intergenic |
| CCACCTTTCCTCCCAATGCA+CGG | 0.582342 | 5.1:+65485621 | None:intergenic |
| TTTGTTGGAAGATCAAGAGA+AGG | 0.582547 | 5.1:+65485533 | None:intergenic |
| AGAATATCTTTAGAGTACTC+CGG | 0.594538 | 5.1:+65485268 | None:intergenic |
| TGGCCGTGCATTGGGAGGAA+AGG | 0.597120 | 5.1:-65485624 | MS.gene071221:CDS |
| CTAAGGCAGAGGTAATTGCT+AGG | 0.598401 | 5.1:-65485354 | MS.gene071221:CDS |
| TTGTTGGAAGATCAAGAGAA+GGG | 0.600896 | 5.1:+65485534 | None:intergenic |
| ATACCTTGATGAAATTACGT+TGG | 0.603079 | 5.1:+65485221 | None:intergenic |
| ATGTGATAAAGATGCATGGA+GGG | 0.610169 | 5.1:-65488821 | MS.gene071221:CDS |
| ATTTCTTAATCAATGTGACA+AGG | 0.618688 | 5.1:+65488631 | None:intergenic |
| AGAGTTACCTGCTAAGGCAG+AGG | 0.620834 | 5.1:-65485365 | MS.gene071221:CDS |
| TTCTATAATCGAATGTCACA+GGG | 0.622205 | 5.1:-65485507 | MS.gene071221:CDS |
| GTACTTGGCCGTGCATTGGG+AGG | 0.623886 | 5.1:-65485629 | MS.gene071221:CDS |
| TGGAGGAAGAAAATGAGACA+TGG | 0.626432 | 5.1:-65488773 | MS.gene071221:CDS |
| GAGTATGTGATAAAGATGCA+TGG | 0.626622 | 5.1:-65488825 | MS.gene071221:CDS |
| GGTGGCCAAAACAAATGCCA+AGG | 0.630316 | 5.1:+65488586 | None:intergenic |
| GGAGGAAGAAAATGAGACAT+GGG | 0.638380 | 5.1:-65488772 | MS.gene071221:CDS |
| GACATGTACAAAGTTTCATG+TGG | 0.640249 | 5.1:-65488750 | MS.gene071221:CDS |
| ACACCAATGTCCCAACCAGT+AGG | 0.651774 | 5.1:+65485590 | None:intergenic |
| TATGTGATAAAGATGCATGG+AGG | 0.687190 | 5.1:-65488822 | MS.gene071221:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTATAAAAAAAATTT+CGG | - | chr5.1:65485161-65485180 | MS.gene071221:intron | 0.0% |
| !!! | TATTTTTTTTAAATTATTAT+CGG | + | chr5.1:65483655-65483674 | None:intergenic | 0.0% |
| !! | AAAATACATAATTAAGTTAT+AGG | - | chr5.1:65483669-65483688 | MS.gene071221:intron | 10.0% |
| !! | ACAAAAATTTACTTAAAAAT+AGG | - | chr5.1:65485234-65485253 | MS.gene071221:CDS | 10.0% |
| !! | CAAAAATTTACTTAAAAATA+GGG | - | chr5.1:65485235-65485254 | MS.gene071221:CDS | 10.0% |
| !! | CAAATATATATTATGTTAAT+GGG | + | chr5.1:65488130-65488149 | None:intergenic | 10.0% |
| !! | TAATATATAATAGTAATTGA+TGG | - | chr5.1:65486719-65486738 | MS.gene071221:intron | 10.0% |
| !! | TCAAATATATATTATGTTAA+TGG | + | chr5.1:65488131-65488150 | None:intergenic | 10.0% |
| !!! | AACAATTTTTTTTATCAATT+GGG | + | chr5.1:65488398-65488417 | None:intergenic | 10.0% |
| !!! | ATATATAATTTTGTTTACAA+TGG | - | chr5.1:65488320-65488339 | MS.gene071221:intron | 10.0% |
| !!! | GTTTTAAAAATCTATAATTA+AGG | - | chr5.1:65488216-65488235 | MS.gene071221:intron | 10.0% |
| !!! | TAACAATTTTTTTTATCAAT+TGG | + | chr5.1:65488399-65488418 | None:intergenic | 10.0% |
| !!! | TACTTTTAAATACAATTAAA+AGG | - | chr5.1:65488522-65488541 | MS.gene071221:intron | 10.0% |
| !!! | TTATTTCAACTTATTTTAAA+TGG | + | chr5.1:65488479-65488498 | None:intergenic | 10.0% |
| !!! | TTCATTAAAACTATATTTTA+GGG | - | chr5.1:65484849-65484868 | MS.gene071221:intron | 10.0% |
| !!! | TTTCATTAAAACTATATTTT+AGG | - | chr5.1:65484848-65484867 | MS.gene071221:intron | 10.0% |
| !! | AAAAAGTTGACATATTTATA+GGG | + | chr5.1:65484892-65484911 | None:intergenic | 15.0% |
| !! | AAAGTTGAAAAAAAAATTAG+AGG | + | chr5.1:65484924-65484943 | None:intergenic | 15.0% |
| !! | AAGTTGAAAAAAAAATTAGA+GGG | + | chr5.1:65484923-65484942 | None:intergenic | 15.0% |
| !! | AATGTTAAAAGGTAATAAAA+AGG | + | chr5.1:65487918-65487937 | None:intergenic | 15.0% |
| !! | AATTTGATTCATATATATCA+AGG | + | chr5.1:65487452-65487471 | None:intergenic | 15.0% |
| !! | ACTTTCTATAATATCTAATA+AGG | + | chr5.1:65484223-65484242 | None:intergenic | 15.0% |
| !! | ATAACATAACTCTATATAAA+TGG | + | chr5.1:65485370-65485389 | None:intergenic | 15.0% |
| !! | ATGAAAATGATTCTTAAATA+GGG | - | chr5.1:65487018-65487037 | MS.gene071221:intron | 15.0% |
| !! | ATGTTAAAAGGTAATAAAAA+GGG | + | chr5.1:65487917-65487936 | None:intergenic | 15.0% |
| !! | ATTATGATGAAAAATATTTG+AGG | + | chr5.1:65486703-65486722 | None:intergenic | 15.0% |
| !! | CTAAAAATAAAACTAGAAAT+TGG | + | chr5.1:65486948-65486967 | None:intergenic | 15.0% |
| !! | GTTAGAAATATGAATTAATT+TGG | - | chr5.1:65484787-65484806 | MS.gene071221:intron | 15.0% |
| !! | TAACATAACTCTATATAAAT+GGG | + | chr5.1:65485369-65485388 | None:intergenic | 15.0% |
| !! | TTGTTAATTTCTATTAAGTA+CGG | - | chr5.1:65483588-65483607 | MS.gene071221:intron | 15.0% |
| !!! | AAAAAGTTGGTATATTTATA+GGG | - | chr5.1:65485326-65485345 | MS.gene071221:CDS | 15.0% |
| !!! | ATGAATTTTTATATTTTTGG+CGG | - | chr5.1:65485106-65485125 | MS.gene071221:intron | 15.0% |
| !!! | ATTTCAATTTTCTATTACTT+TGG | - | chr5.1:65486969-65486988 | MS.gene071221:intron | 15.0% |
| !!! | ATTTGATAATTAGATTTCTA+TGG | - | chr5.1:65484394-65484413 | MS.gene071221:intron | 15.0% |
| !!! | GTACTACTTTTAAAAATAAA+TGG | - | chr5.1:65484335-65484354 | MS.gene071221:intron | 15.0% |
| !!! | TAAAAAGTTGGTATATTTAT+AGG | - | chr5.1:65485325-65485344 | MS.gene071221:CDS | 15.0% |
| !!! | TAGTGATAGAAAATTTTATA+GGG | - | chr5.1:65485266-65485285 | MS.gene071221:CDS | 15.0% |
| !!! | TCATATTTAATTCATGTTTT+TGG | + | chr5.1:65485090-65485109 | None:intergenic | 15.0% |
| !!! | TTCTTTTATTTGTGATTAAA+AGG | + | chr5.1:65485624-65485643 | None:intergenic | 15.0% |
| !! | AAATTAGATGACTAAAACAT+GGG | - | chr5.1:65487356-65487375 | MS.gene071221:intron | 20.0% |
| !! | ATACAATTAAAAGGATAGTT+TGG | - | chr5.1:65488531-65488550 | MS.gene071221:intron | 20.0% |
| !! | CAAAAAGTTGACATATTTAT+AGG | + | chr5.1:65484893-65484912 | None:intergenic | 20.0% |
| !! | GAAATTAACAATTAATTACC+TGG | + | chr5.1:65483579-65483598 | None:intergenic | 20.0% |
| !! | GATCATAATAACAATATTGT+AGG | + | chr5.1:65485597-65485616 | None:intergenic | 20.0% |
| !! | GATGAAAATGATTCTTAAAT+AGG | - | chr5.1:65487017-65487036 | MS.gene071221:intron | 20.0% |
| !! | GTTTAGAAAAGAAAGTAAAT+GGG | + | chr5.1:65488104-65488123 | None:intergenic | 20.0% |
| !! | TAAATTAGATGACTAAAACA+TGG | - | chr5.1:65487355-65487374 | MS.gene071221:intron | 20.0% |
| !! | TAGTTCACAAAAAATAAAGT+AGG | - | chr5.1:65485976-65485995 | MS.gene071221:intron | 20.0% |
| !! | TGAAAATGATTCTTAAATAG+GGG | - | chr5.1:65487019-65487038 | MS.gene071221:intron | 20.0% |
| !! | TGTAATCATAAATATTGTGT+CGG | + | chr5.1:65484524-65484543 | None:intergenic | 20.0% |
| !! | TGTTTAGAAAAGAAAGTAAA+TGG | + | chr5.1:65488105-65488124 | None:intergenic | 20.0% |
| !! | TGTTTGACATGTATATTTAA+AGG | - | chr5.1:65488194-65488213 | MS.gene071221:intron | 20.0% |
| !! | TTAATATTTCTCGTTTGATA+AGG | - | chr5.1:65486228-65486247 | MS.gene071221:intron | 20.0% |
| !!! | AAAGTGAATTGATTTATGTT+TGG | + | chr5.1:65488638-65488657 | None:intergenic | 20.0% |
| !!! | AAATATGGAGATCATATTTT+GGG | - | chr5.1:65486837-65486856 | MS.gene071221:intron | 20.0% |
| !!! | AAATGGGTTAAATATGTTTT+TGG | + | chr5.1:65485353-65485372 | None:intergenic | 20.0% |
| !!! | AAGTGAAGATGAATAATTTT+TGG | + | chr5.1:65484954-65484973 | None:intergenic | 20.0% |
| !!! | AAGTGAATTGATTTATGTTT+GGG | + | chr5.1:65488637-65488656 | None:intergenic | 20.0% |
| !!! | AAGTTGAAGGAAAATTTTAA+AGG | - | chr5.1:65485294-65485313 | MS.gene071221:CDS | 20.0% |
| !!! | ACTTCATAATGTTTTGTAAA+AGG | + | chr5.1:65486465-65486484 | None:intergenic | 20.0% |
| !!! | AGTTGAAGGAAAATTTTAAA+GGG | - | chr5.1:65485295-65485314 | MS.gene071221:CDS | 20.0% |
| !!! | GTAGTGATAGAAAATTTTAT+AGG | - | chr5.1:65485265-65485284 | MS.gene071221:CDS | 20.0% |
| !!! | TAAATATGGAGATCATATTT+TGG | - | chr5.1:65486836-65486855 | MS.gene071221:intron | 20.0% |
| !!! | TATCTACGTTTTTCTTATTT+TGG | + | chr5.1:65485513-65485532 | None:intergenic | 20.0% |
| !!! | TCTTGTTTATAAGACAAAAA+CGG | + | chr5.1:65484102-65484121 | None:intergenic | 20.0% |
| !!! | TGAAATTTAAGTTTTGAGTT+AGG | - | chr5.1:65484444-65484463 | MS.gene071221:intron | 20.0% |
| !!! | TTGAATTAAGTTTAGTTTCA+CGG | + | chr5.1:65486409-65486428 | None:intergenic | 20.0% |
| !!! | TTTTAAATTATTATCGGTGT+CGG | + | chr5.1:65483649-65483668 | None:intergenic | 20.0% |
| !!! | TTTTGTCTTATAAACAAGAT+CGG | - | chr5.1:65484103-65484122 | MS.gene071221:intron | 20.0% |
| ! | AAAGAAACACTAGAACTAAA+TGG | - | chr5.1:65486340-65486359 | MS.gene071221:intron | 25.0% |
| ! | AAGAAAAAGGAAATTAACCT+AGG | + | chr5.1:65483772-65483791 | None:intergenic | 25.0% |
| ! | AATGAAAATTTCGTGTTTGT+AGG | + | chr5.1:65484835-65484854 | None:intergenic | 25.0% |
| ! | AGTTATGAAATTGAATGCAA+TGG | + | chr5.1:65483884-65483903 | None:intergenic | 25.0% |
| ! | ATTAACAATTAATTACCTGG+TGG | + | chr5.1:65483576-65483595 | None:intergenic | 25.0% |
| ! | ATTTCTTAATCAATGTGACA+AGG | + | chr5.1:65483513-65483532 | None:intergenic | 25.0% |
| ! | CAATTGAGTCTAAAAGAAAA+AGG | + | chr5.1:65483785-65483804 | None:intergenic | 25.0% |
| ! | CAGTAAAAACATTCTTCAAA+AGG | + | chr5.1:65485656-65485675 | None:intergenic | 25.0% |
| ! | GAAAATGATTCTTAAATAGG+GGG | - | chr5.1:65487020-65487039 | MS.gene071221:intron | 25.0% |
| ! | GGAATTGAGATGTTTAAATA+TGG | - | chr5.1:65486822-65486841 | MS.gene071221:intron | 25.0% |
| ! | GGTAATAAAAAGGGTAATAA+AGG | + | chr5.1:65487908-65487927 | None:intergenic | 25.0% |
| ! | TCAACAAAAGTTAATGTATC+TGG | + | chr5.1:65484079-65484098 | None:intergenic | 25.0% |
| ! | TCATATATATCAAGGAGTTA+AGG | + | chr5.1:65487444-65487463 | None:intergenic | 25.0% |
| ! | TGTTAATTTCCTAATCTTTG+AGG | - | chr5.1:65483803-65483822 | MS.gene071221:intron | 25.0% |
| !! | AATTCAAGTTAGTGTATGTT+TGG | + | chr5.1:65488732-65488751 | None:intergenic | 25.0% |
| !! | ATGAAAAATATTTGAGGCTT+TGG | + | chr5.1:65486697-65486716 | None:intergenic | 25.0% |
| !! | ATTGATTGATTTACTCATAG+AGG | - | chr5.1:65488761-65488780 | MS.gene071221:CDS | 25.0% |
| !! | GACGTTTTTATAAACAAGTT+AGG | + | chr5.1:65485478-65485497 | None:intergenic | 25.0% |
| !! | TAAAGTCTTTTTCCCATAAA+CGG | - | chr5.1:65484632-65484651 | MS.gene071221:intron | 25.0% |
| !! | TACATATGAGTTTGCTTTAT+AGG | + | chr5.1:65484986-65485005 | None:intergenic | 25.0% |
| !! | TGATTTGAGATCAAAGAATT+TGG | - | chr5.1:65487093-65487112 | MS.gene071221:intron | 25.0% |
| !!! | CTTTTGAAGAATGTTTTTAC+TGG | - | chr5.1:65485654-65485673 | MS.gene071221:intron | 25.0% |
| !!! | GGTAATTTTTTTCCCATAAA+CGG | - | chr5.1:65484415-65484434 | MS.gene071221:intron | 25.0% |
| !!! | GTTGAAGGAAAATTTTAAAG+GGG | - | chr5.1:65485296-65485315 | MS.gene071221:CDS | 25.0% |
| !!! | TATGACTACTTTTATGTGTA+TGG | - | chr5.1:65485811-65485830 | MS.gene071221:intron | 25.0% |
| !!! | TGAAGATGAATAATTTTTGG+AGG | + | chr5.1:65484951-65484970 | None:intergenic | 25.0% |
| !!! | TTTCAATTTTCAAGTGTGTT+TGG | - | chr5.1:65487751-65487770 | MS.gene071221:intron | 25.0% |
| AAACTTGAGAATACCGTTTA+TGG | + | chr5.1:65484648-65484667 | None:intergenic | 30.0% | |
| AAAGGGTAATAAAGGAAGAA+AGG | + | chr5.1:65487900-65487919 | None:intergenic | 30.0% | |
| AAATCCATTCTTGAGAAAAC+TGG | + | chr5.1:65488879-65488898 | None:intergenic | 30.0% | |
| AACTTGAGAATACCGTTTAT+GGG | + | chr5.1:65484647-65484666 | None:intergenic | 30.0% | |
| AAGGGGCTAAAATAAAAAGT+TGG | - | chr5.1:65485313-65485332 | MS.gene071221:CDS | 30.0% | |
| AAGGGTAATAAAGGAAGAAA+GGG | + | chr5.1:65487899-65487918 | None:intergenic | 30.0% | |
| AAGTGATTCTTATGACTTGA+TGG | + | chr5.1:65488601-65488620 | None:intergenic | 30.0% | |
| AAGTTAGTGTATGTTTGGTA+CGG | + | chr5.1:65488727-65488746 | None:intergenic | 30.0% | |
| AATTTCAAACGTACCGTTTA+TGG | + | chr5.1:65484431-65484450 | None:intergenic | 30.0% | |
| ACAAGATCGTGAATGTTAAA+AGG | + | chr5.1:65487929-65487948 | None:intergenic | 30.0% | |
| ACATAAACCTACAACTCTAA+GGG | + | chr5.1:65487054-65487073 | None:intergenic | 30.0% | |
| ACTAAGCATCATGTTTGATA+AGG | - | chr5.1:65486490-65486509 | MS.gene071221:intron | 30.0% | |
| ACTTGTAACTTCTTATAGCA+AGG | - | chr5.1:65487168-65487187 | MS.gene071221:intron | 30.0% | |
| ATACCTTGATGAAATTACGT+TGG | + | chr5.1:65486923-65486942 | None:intergenic | 30.0% | |
| ATATAAATCGACAGAAGAGA+TGG | + | chr5.1:65487141-65487160 | None:intergenic | 30.0% | |
| ATCAAATCCACCTTATGTTT+GGG | - | chr5.1:65487483-65487502 | MS.gene071221:intron | 30.0% | |
| ATGCTTATGGAAATGAGAAA+TGG | - | chr5.1:65483479-65483498 | MS.gene071221:intron | 30.0% | |
| ATGTATGCTAGCATAAACAA+TGG | + | chr5.1:65483967-65483986 | None:intergenic | 30.0% | |
| ATTTCAAACGTACCGTTTAT+GGG | + | chr5.1:65484430-65484449 | None:intergenic | 30.0% | |
| CAAATCCCAATTCTTTATGA+TGG | + | chr5.1:65486997-65487016 | None:intergenic | 30.0% | |
| CACGTGAATGTACATATTAT+TGG | + | chr5.1:65485741-65485760 | None:intergenic | 30.0% | |
| CATCATAAAGAATTGGGATT+TGG | - | chr5.1:65486995-65487014 | MS.gene071221:intron | 30.0% | |
| CTTAGATCAAGATTGACAAA+TGG | - | chr5.1:65483845-65483864 | MS.gene071221:intron | 30.0% | |
| GAAATGTGTGAAGAAATGTA+AGG | - | chr5.1:65483934-65483953 | MS.gene071221:intron | 30.0% | |
| TAAGAGACAAACAATTTGAG+AGG | + | chr5.1:65486274-65486293 | None:intergenic | 30.0% | |
| TACATAAACCTACAACTCTA+AGG | + | chr5.1:65487055-65487074 | None:intergenic | 30.0% | |
| TACATTGTATATGACCTTTG+CGG | - | chr5.1:65487624-65487643 | MS.gene071221:intron | 30.0% | |
| TCATTAAATTGCCATGATTG+AGG | + | chr5.1:65486368-65486387 | None:intergenic | 30.0% | |
| TGGAACCATCATAAAGAATT+GGG | - | chr5.1:65486989-65487008 | MS.gene071221:intron | 30.0% | |
| TTAAAATGTCTCACATGATC+TGG | + | chr5.1:65484373-65484392 | None:intergenic | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr5.1:65485281-65485300 | MS.gene071221:CDS | 30.0% | |
| TTCTATAATCGAATGTCACA+GGG | - | chr5.1:65486634-65486653 | MS.gene071221:intron | 30.0% | |
| TTGAATACTGTCCAAACATA+TGG | + | chr5.1:65485570-65485589 | None:intergenic | 30.0% | |
| TTGACAAATGGTTTATGACT+TGG | - | chr5.1:65483857-65483876 | MS.gene071221:intron | 30.0% | |
| TTGGAACCATCATAAAGAAT+TGG | - | chr5.1:65486988-65487007 | MS.gene071221:intron | 30.0% | |
| TTTCTATAATCGAATGTCAC+AGG | - | chr5.1:65486633-65486652 | MS.gene071221:intron | 30.0% | |
| ! | AAAAGAAAGTAAATGGGCTT+TGG | + | chr5.1:65488098-65488117 | None:intergenic | 30.0% |
| ! | AAAATCCTTGGCATTTGTTT+TGG | - | chr5.1:65483550-65483569 | MS.gene071221:intron | 30.0% |
| ! | ATATGAGTTTGCTTTATAGG+AGG | + | chr5.1:65484983-65485002 | None:intergenic | 30.0% |
| ! | ATCATGTTTGATAAGGTACT+TGG | - | chr5.1:65486497-65486516 | MS.gene071221:intron | 30.0% |
| ! | ATGAGTTGAGTCTTTATGAT+GGG | - | chr5.1:65483431-65483450 | MS.gene071221:intron | 30.0% |
| ! | CTAGTATTTCTCATTTGCTA+GGG | - | chr5.1:65486162-65486181 | MS.gene071221:intron | 30.0% |
| ! | GACGCAAATATATGGATTTT+AGG | - | chr5.1:65487969-65487988 | MS.gene071221:intron | 30.0% |
| ! | TATGAGTTTGCTTTATAGGA+GGG | + | chr5.1:65484982-65485001 | None:intergenic | 30.0% |
| ! | TCGATTATAGAAAGCTTTGT+TGG | + | chr5.1:65486626-65486645 | None:intergenic | 30.0% |
| !! | AGAATATCTTTAGAGTACTC+CGG | + | chr5.1:65486876-65486895 | None:intergenic | 30.0% |
| !! | GATCATATTTTGGGAATTCA+AGG | - | chr5.1:65486846-65486865 | MS.gene071221:intron | 30.0% |
| !! | GTAAACGAGAATTGATTTTG+CGG | + | chr5.1:65487853-65487872 | None:intergenic | 30.0% |
| !! | TGAGCAAAAGTTGATGTATT+TGG | - | chr5.1:65484039-65484058 | MS.gene071221:intron | 30.0% |
| !!! | AAGTTTTGAGTTAGGAAGTA+CGG | - | chr5.1:65484452-65484471 | MS.gene071221:intron | 30.0% |
| AAGAACACGACGCAAATATA+TGG | - | chr5.1:65487961-65487980 | MS.gene071221:intron | 35.0% | |
| ACTAAATGGTTCCTCAATCA+TGG | - | chr5.1:65486354-65486373 | MS.gene071221:intron | 35.0% | |
| AGGGTAATAAAGGAAGAAAG+GGG | + | chr5.1:65487898-65487917 | None:intergenic | 35.0% | |
| AGGTTGAGGAAGGAATTATT+GGG | - | chr5.1:65488070-65488089 | MS.gene071221:intron | 35.0% | |
| ATAGATTCATCACCTAAGTG+AGG | + | chr5.1:65485764-65485783 | None:intergenic | 35.0% | |
| ATCTTCTATGCCTATGTAGT+TGG | - | chr5.1:65487658-65487677 | MS.gene071221:intron | 35.0% | |
| ATGAAACACAAACACAGACA+CGG | + | chr5.1:65484602-65484621 | None:intergenic | 35.0% | |
| ATGTGATAAAGATGCATGGA+GGG | - | chr5.1:65483320-65483339 | MS.gene071221:CDS | 35.0% | |
| ATGTTTCCATGATTGAAGTC+GGG | - | chr5.1:65484148-65484167 | MS.gene071221:intron | 35.0% | |
| CAATCAAAGCCTCAAAGATT+AGG | + | chr5.1:65483815-65483834 | None:intergenic | 35.0% | |
| CATCCAACGTAATTTCATCA+AGG | - | chr5.1:65486917-65486936 | MS.gene071221:intron | 35.0% | |
| GAAGGGAAACAAATATGTGA+TGG | + | chr5.1:65486593-65486612 | None:intergenic | 35.0% | |
| GACATGTACAAAGTTTCATG+TGG | - | chr5.1:65483391-65483410 | MS.gene071221:intron | 35.0% | |
| GAGTATGTGATAAAGATGCA+TGG | - | chr5.1:65483316-65483335 | MS.gene071221:CDS | 35.0% | |
| GATCAAATCCACCTTATGTT+TGG | - | chr5.1:65487482-65487501 | MS.gene071221:intron | 35.0% | |
| GATGTTTCCATGATTGAAGT+CGG | - | chr5.1:65484147-65484166 | MS.gene071221:intron | 35.0% | |
| GCTAGTATTTCTCATTTGCT+AGG | - | chr5.1:65486161-65486180 | MS.gene071221:intron | 35.0% | |
| GGTATTCTTGAAAATGTTGG+AGG | - | chr5.1:65483351-65483370 | MS.gene071221:intron | 35.0% | |
| GTCCATGTAGAATATAGACT+GGG | - | chr5.1:65484196-65484215 | MS.gene071221:intron | 35.0% | |
| GTCTTATAAACAAGATCGGT+GGG | - | chr5.1:65484107-65484126 | MS.gene071221:intron | 35.0% | |
| GTGAAGAAATGTAAGGCTTT+AGG | - | chr5.1:65483941-65483960 | MS.gene071221:intron | 35.0% | |
| TAATGCTCACAAGAAGACAA+AGG | + | chr5.1:65485405-65485424 | None:intergenic | 35.0% | |
| TAGAGGATGTTTCAAATGTC+AGG | - | chr5.1:65488778-65488797 | MS.gene071221:CDS | 35.0% | |
| TATGTGATAAAGATGCATGG+AGG | - | chr5.1:65483319-65483338 | MS.gene071221:CDS | 35.0% | |
| TCCATGTAGAATATAGACTG+GGG | - | chr5.1:65484197-65484216 | MS.gene071221:intron | 35.0% | |
| TCTTCTATGCCTATGTAGTT+GGG | - | chr5.1:65487659-65487678 | MS.gene071221:intron | 35.0% | |
| TGTCCATGTAGAATATAGAC+TGG | - | chr5.1:65484195-65484214 | MS.gene071221:intron | 35.0% | |
| TGTCTGTGTTTGTGTTTCAT+AGG | - | chr5.1:65484602-65484621 | MS.gene071221:intron | 35.0% | |
| TGTCTTATAAACAAGATCGG+TGG | - | chr5.1:65484106-65484125 | MS.gene071221:intron | 35.0% | |
| TTGTTGGAAGATCAAGAGAA+GGG | + | chr5.1:65486610-65486629 | None:intergenic | 35.0% | |
| TTTGCTAGGGTTTGAATTCA+AGG | - | chr5.1:65486175-65486194 | MS.gene071221:intron | 35.0% | |
| TTTGTTGGAAGATCAAGAGA+AGG | + | chr5.1:65486611-65486630 | None:intergenic | 35.0% | |
| ! | AAAATGGGTTCGAAGAGATT+TGG | - | chr5.1:65483268-65483287 | MS.gene071221:CDS | 35.0% |
| ! | AGTGTTTCTTTGTTTGCAGT+AGG | + | chr5.1:65486331-65486350 | None:intergenic | 35.0% |
| ! | CATAAATATTGTGTCGGTGT+CGG | + | chr5.1:65484518-65484537 | None:intergenic | 35.0% |
| ! | GATGAGTTGAGTCTTTATGA+TGG | - | chr5.1:65483430-65483449 | MS.gene071221:intron | 35.0% |
| ! | TGGGGTATTCTTGAAAATGT+TGG | - | chr5.1:65483348-65483367 | MS.gene071221:intron | 35.0% |
| ! | TTAAGTTATAGGTGTCGTGT+CGG | - | chr5.1:65483680-65483699 | MS.gene071221:intron | 35.0% |
| ! | TTCTTTGTTTGCAGTAGGTA+GGG | + | chr5.1:65486326-65486345 | None:intergenic | 35.0% |
| ! | TTTCTTTGTTTGCAGTAGGT+AGG | + | chr5.1:65486327-65486346 | None:intergenic | 35.0% |
| !! | TCTTATGACTTGATGGTGTT+TGG | + | chr5.1:65488594-65488613 | None:intergenic | 35.0% |
| AAAAGAAAACCAGGGATGCT+GGG | + | chr5.1:65488009-65488028 | None:intergenic | 40.0% | |
| ACTTAGTGTCCCAACTACAT+AGG | + | chr5.1:65487671-65487690 | None:intergenic | 40.0% | |
| AGACTCAACTCATCATCCTT+AGG | + | chr5.1:65483424-65483443 | None:intergenic | 40.0% | |
| AGTAGGTAGGGTAGTTCAAT+TGG | + | chr5.1:65486314-65486333 | None:intergenic | 40.0% | |
| AGTCACAACTAAGCTAAGTG+AGG | + | chr5.1:65485712-65485731 | None:intergenic | 40.0% | |
| ATGTTTGGCCTAGTTAGACA+AGG | - | chr5.1:65485853-65485872 | MS.gene071221:intron | 40.0% | |
| ATTGCAGTTCTGCAACTGAT+AGG | + | chr5.1:65488046-65488065 | None:intergenic | 40.0% | |
| ATTGCTAGGTCAGATAAGAC+TGG | - | chr5.1:65486801-65486820 | MS.gene071221:intron | 40.0% | |
| CAATAATTCCTTCCTCAACC+TGG | + | chr5.1:65488071-65488090 | None:intergenic | 40.0% | |
| CACATATCCCTTAGAGTTGT+AGG | - | chr5.1:65487044-65487063 | MS.gene071221:intron | 40.0% | |
| CTTAGCTTAGTTGTGACTTG+TGG | - | chr5.1:65485714-65485733 | MS.gene071221:intron | 40.0% | |
| GATACAAGAGTTACCTGCTA+AGG | - | chr5.1:65486770-65486789 | MS.gene071221:intron | 40.0% | |
| GATTAGGTGTGTCCTAGTAT+CGG | + | chr5.1:65483731-65483750 | None:intergenic | 40.0% | |
| GCTTGAAACGTAAAACCCTA+AGG | + | chr5.1:65485896-65485915 | None:intergenic | 40.0% | |
| GGAGGAAGAAAATGAGACAT+GGG | - | chr5.1:65483369-65483388 | MS.gene071221:intron | 40.0% | |
| GGCTGAGTAAAAGAAAACCA+GGG | + | chr5.1:65488017-65488036 | None:intergenic | 40.0% | |
| GGGTAATAAAGGAAGAAAGG+GGG | + | chr5.1:65487897-65487916 | None:intergenic | 40.0% | |
| GGTAGTTGCAATGATGCTTA+TGG | - | chr5.1:65483466-65483485 | MS.gene071221:intron | 40.0% | |
| TAAAAGAAAACCAGGGATGC+TGG | + | chr5.1:65488010-65488029 | None:intergenic | 40.0% | |
| TAGGCCAAACATTATCCCAA+AGG | + | chr5.1:65485845-65485864 | None:intergenic | 40.0% | |
| TAGTTAGACAAGGTCAGTGT+GGG | - | chr5.1:65485863-65485882 | MS.gene071221:intron | 40.0% | |
| TATAGTAAGCCACTAGGAAG+TGG | + | chr5.1:65487197-65487216 | None:intergenic | 40.0% | |
| TCATGCTATAGTAAGCCACT+AGG | + | chr5.1:65487203-65487222 | None:intergenic | 40.0% | |
| TCCATGCAGACAAAAATCCT+TGG | - | chr5.1:65483538-65483557 | MS.gene071221:intron | 40.0% | |
| TGGAGGAAGAAAATGAGACA+TGG | - | chr5.1:65483368-65483387 | MS.gene071221:intron | 40.0% | |
| TGTTTCCATGATTGAAGTCG+GGG | - | chr5.1:65484149-65484168 | MS.gene071221:intron | 40.0% | |
| TTAGTGTATGTTTGGTACGG+CGG | + | chr5.1:65488724-65488743 | None:intergenic | 40.0% | |
| TTCATGTGGAGAGTTTCCTA+AGG | - | chr5.1:65483405-65483424 | MS.gene071221:intron | 40.0% | |
| TTTGGGAATTCAAGGTCATC+CGG | - | chr5.1:65486854-65486873 | MS.gene071221:intron | 40.0% | |
| ! | CAGGTTGAGGAAGGAATTAT+TGG | - | chr5.1:65488069-65488088 | MS.gene071221:intron | 40.0% |
| ! | TGCACCAGTTTTCTCAAGAA+TGG | - | chr5.1:65488872-65488891 | MS.gene071221:CDS | 40.0% |
| !! | AAGCTTTTGCTATAGGAGCA+AGG | - | chr5.1:65488801-65488820 | MS.gene071221:CDS | 40.0% |
| !! | AGCTTTTGCTATAGGAGCAA+GGG | - | chr5.1:65488802-65488821 | MS.gene071221:CDS | 40.0% |
| !! | GCTACCTTTGGGATAATGTT+TGG | - | chr5.1:65485838-65485857 | MS.gene071221:intron | 40.0% |
| !! | TATGATGGGTTTGTGATCAC+TGG | - | chr5.1:65483445-65483464 | MS.gene071221:intron | 40.0% |
| !! | TGTATGGACTTGCTACCTTT+GGG | - | chr5.1:65485827-65485846 | MS.gene071221:intron | 40.0% |
| !! | TGTCAGGAAGCTTTTGCTAT+AGG | - | chr5.1:65488794-65488813 | MS.gene071221:CDS | 40.0% |
| !!! | AAGATGCATGGAGGGTATTT+TGG | - | chr5.1:65483328-65483347 | MS.gene071221:CDS | 40.0% |
| !!! | AGATGCATGGAGGGTATTTT+GGG | - | chr5.1:65483329-65483348 | MS.gene071221:CDS | 40.0% |
| AATCGAATGTCACAGGGATG+AGG | - | chr5.1:65486640-65486659 | MS.gene071221:intron | 45.0% | |
| ACCGCAAAAGCTAGGATTTG+TGG | + | chr5.1:65487827-65487846 | None:intergenic | 45.0% | |
| AGCCTTGCAAACGTGATTCT+AGG | - | chr5.1:65487796-65487815 | MS.gene071221:intron | 45.0% | |
| AGTTAGACAAGGTCAGTGTG+GGG | - | chr5.1:65485864-65485883 | MS.gene071221:intron | 45.0% | |
| CACACTGACCTTGTCTAACT+AGG | + | chr5.1:65485864-65485883 | None:intergenic | 45.0% | |
| CGGCTGAGTAAAAGAAAACC+AGG | + | chr5.1:65488018-65488037 | None:intergenic | 45.0% | |
| CTAACTCGTCGCCATATGTT+TGG | - | chr5.1:65485556-65485575 | MS.gene071221:CDS | 45.0% | |
| CTAAGGCAGAGGTAATTGCT+AGG | - | chr5.1:65486787-65486806 | MS.gene071221:intron | 45.0% | |
| CTAGTTAGACAAGGTCAGTG+TGG | - | chr5.1:65485862-65485881 | MS.gene071221:intron | 45.0% | |
| CTCCTAGAATCACGTTTGCA+AGG | + | chr5.1:65487801-65487820 | None:intergenic | 45.0% | |
| CTCTTCCAGGCATTTGTATC+TGG | + | chr5.1:65488848-65488867 | None:intergenic | 45.0% | |
| GCCCCAGTCTATATTCTACA+TGG | + | chr5.1:65484201-65484220 | None:intergenic | 45.0% | |
| GTCAGTGTCTGTGTCGTATT+CGG | - | chr5.1:65484573-65484592 | MS.gene071221:intron | 45.0% | |
| GTTAGTGTCTGTGTCGTGTT+CGG | + | chr5.1:65483623-65483642 | None:intergenic | 45.0% | |
| GTTTCCATGATTGAAGTCGG+GGG | - | chr5.1:65484150-65484169 | MS.gene071221:intron | 45.0% | |
| TACATTCACGTGCCTCACTT+AGG | - | chr5.1:65485749-65485768 | MS.gene071221:intron | 45.0% | |
| TAGAGCCAGATACAAATGCC+TGG | - | chr5.1:65488840-65488859 | MS.gene071221:CDS | 45.0% | |
| TCGTGTCTACGTTTCTGTGT+AGG | + | chr5.1:65487514-65487533 | None:intergenic | 45.0% | |
| TCTGCAACTGATAGGCATGT+CGG | + | chr5.1:65488038-65488057 | None:intergenic | 45.0% | |
| TTTCCATGATTGAAGTCGGG+GGG | - | chr5.1:65484151-65484170 | MS.gene071221:intron | 45.0% | |
| ! | AGGTTTCAGAGCTTTTGTCG+TGG | - | chr5.1:65487726-65487745 | MS.gene071221:intron | 45.0% |
| ! | GCCAAGGATTTTTGTCTGCA+TGG | + | chr5.1:65483542-65483561 | None:intergenic | 45.0% |
| ! | TAGGAAGCACGAACACTCTT+CGG | + | chr5.1:65483753-65483772 | None:intergenic | 45.0% |
| ! | TGGTGTGTTGTTATGTGCTG+AGG | - | chr5.1:65483288-65483307 | MS.gene071221:CDS | 45.0% |
| ! | TTGCAAGGCTGAATCGCTTT+TGG | + | chr5.1:65487786-65487805 | None:intergenic | 45.0% |
| !! | GCCACAAATCCTAGCTTTTG+CGG | - | chr5.1:65487823-65487842 | MS.gene071221:intron | 45.0% |
| !! | GTAGGACTAGCCCAAACATA+AGG | + | chr5.1:65487496-65487515 | None:intergenic | 45.0% |
| !! | GTGTATGGACTTGCTACCTT+TGG | - | chr5.1:65485826-65485845 | MS.gene071221:intron | 45.0% |
| !!! | GATGCATGGAGGGTATTTTG+GGG | - | chr5.1:65483330-65483349 | MS.gene071221:CDS | 45.0% |
| !! | AATTATAGATTAAAAATAAT+AGG | + | chr5.1:65488258-65488277 | None:intergenic | 5.0% |
| !! | GAAAAATATATAATAATATA+AGG | - | chr5.1:65485035-65485054 | MS.gene071221:intron | 5.0% |
| !!! | AATATGAATTTTTATATTTT+TGG | - | chr5.1:65485103-65485122 | MS.gene071221:intron | 5.0% |
| !!! | TAAAAAATTCTAATTTTTTT+TGG | + | chr5.1:65485067-65485086 | None:intergenic | 5.0% |
| !!! | TTATTTTTAATCTATAATTA+AGG | - | chr5.1:65488259-65488278 | MS.gene071221:intron | 5.0% |
| AAGTGTGTCTCGACATGCGT+CGG | - | chr5.1:65484489-65484508 | MS.gene071221:intron | 50.0% | |
| ACACCAATGTCCCAACCAGT+AGG | + | chr5.1:65486554-65486573 | None:intergenic | 50.0% | |
| ACTGGTGCAAAGTCTCTTCC+AGG | + | chr5.1:65488861-65488880 | None:intergenic | 50.0% | |
| AGAGTTACCTGCTAAGGCAG+AGG | - | chr5.1:65486776-65486795 | MS.gene071221:intron | 50.0% | |
| CATGACGTGTGTCCGATACT+AGG | - | chr5.1:65483716-65483735 | MS.gene071221:intron | 50.0% | |
| GAACTGCAATCACCAGGTTG+AGG | - | chr5.1:65488056-65488075 | MS.gene071221:intron | 50.0% | |
| GATCACATGTGATGCCGCAA+AGG | + | chr5.1:65487641-65487660 | None:intergenic | 50.0% | |
| GCAATTACCTCTGCCTTAGC+AGG | + | chr5.1:65486786-65486805 | None:intergenic | 50.0% | |
| GCACGAACACTCTTCGGATT+AGG | + | chr5.1:65483747-65483766 | None:intergenic | 50.0% | |
| GGTGGCCAAAACAAATGCCA+AGG | + | chr5.1:65483558-65483577 | None:intergenic | 50.0% | |
| GTTGCAGAACTGCAATCACC+AGG | - | chr5.1:65488050-65488069 | MS.gene071221:intron | 50.0% | |
| TATCCCCCCGACTTCAATCA+TGG | + | chr5.1:65484157-65484176 | None:intergenic | 50.0% | |
| TGCTATAGGAGCAAGGGAGA+GGG | - | chr5.1:65488808-65488827 | MS.gene071221:CDS | 50.0% | |
| TGGGACACTAAGTGCCTGTT+TGG | - | chr5.1:65487678-65487697 | MS.gene071221:intron | 50.0% | |
| TGTATGTTTGGTACGGCGGT+GGG | + | chr5.1:65488720-65488739 | None:intergenic | 50.0% | |
| TTGCTATAGGAGCAAGGGAG+AGG | - | chr5.1:65488807-65488826 | MS.gene071221:CDS | 50.0% | |
| ! | AAGGTACTTGGCCGTGCATT+GGG | - | chr5.1:65486509-65486528 | MS.gene071221:intron | 50.0% |
| ! | GCAAGGTATCCACTTCCTAG+TGG | - | chr5.1:65487185-65487204 | MS.gene071221:intron | 50.0% |
| ! | TAAGGTACTTGGCCGTGCAT+TGG | - | chr5.1:65486508-65486527 | MS.gene071221:intron | 50.0% |
| ! | TAAGTGCCTGTTTGGTTCCG+CGG | - | chr5.1:65487686-65487705 | MS.gene071221:intron | 50.0% |
| ! | TATAGGTGTCGTGTCGGTGT+TGG | - | chr5.1:65483686-65483705 | MS.gene071221:intron | 50.0% |
| ! | TCTCCTACTGGTTGGGACAT+TGG | - | chr5.1:65486548-65486567 | MS.gene071221:intron | 50.0% |
| ! | TGCAATCACCAGGTTGAGGA+AGG | - | chr5.1:65488060-65488079 | MS.gene071221:intron | 50.0% |
| !! | GAAGAGTGTTCGTGCTTCCT+AGG | - | chr5.1:65483752-65483771 | MS.gene071221:intron | 50.0% |
| !! | GGACTAGCCCAAACATAAGG+TGG | + | chr5.1:65487493-65487512 | None:intergenic | 50.0% |
| !!! | TGGCATTTGTTTTGGCCACC+AGG | - | chr5.1:65483558-65483577 | MS.gene071221:intron | 50.0% |
| CCACCTTTCCTCCCAATGCA+CGG | + | chr5.1:65486523-65486542 | None:intergenic | 55.0% | |
| CCAGGGATGCTGGGTGAATA+TGG | + | chr5.1:65488000-65488019 | None:intergenic | 55.0% | |
| CCATATTCACCCAGCATCCC+TGG | - | chr5.1:65487997-65488016 | MS.gene071221:intron | 55.0% | |
| CGTGCATTGGGAGGAAAGGT+GGG | - | chr5.1:65486521-65486540 | MS.gene071221:intron | 55.0% | |
| GTGTATGTTTGGTACGGCGG+TGG | + | chr5.1:65488721-65488740 | None:intergenic | 55.0% | |
| AAGGTGGGTCGCTCTCCTAC+TGG | - | chr5.1:65486536-65486555 | MS.gene071221:intron | 60.0% | |
| AGTGTGGGGCGCATGCCTTA+GGG | - | chr5.1:65485878-65485897 | MS.gene071221:intron | 60.0% | |
| CCGTGCATTGGGAGGAAAGG+TGG | - | chr5.1:65486520-65486539 | MS.gene071221:intron | 60.0% | |
| CGGTGGGAACGCTTAAACGC+AGG | - | chr5.1:65487706-65487725 | MS.gene071221:intron | 60.0% | |
| GCGTTTAAGCGTTCCCACCG+CGG | + | chr5.1:65487706-65487725 | None:intergenic | 60.0% | |
| GTACTTGGCCGTGCATTGGG+AGG | - | chr5.1:65486512-65486531 | MS.gene071221:intron | 60.0% | |
| TGCGGCTCACCGCAAAAGCT+AGG | + | chr5.1:65487835-65487854 | None:intergenic | 60.0% | |
| TGGCCGTGCATTGGGAGGAA+AGG | - | chr5.1:65486517-65486536 | MS.gene071221:intron | 60.0% | |
| TGGGTCGCTCTCCTACTGGT+TGG | - | chr5.1:65486540-65486559 | MS.gene071221:intron | 60.0% | |
| TTCCCACCGCGGAACCAAAC+AGG | + | chr5.1:65487695-65487714 | None:intergenic | 60.0% | |
| ! | GGGTCGCTCTCCTACTGGTT+GGG | - | chr5.1:65486541-65486560 | MS.gene071221:intron | 60.0% |
| ! | TGCCTGTTTGGTTCCGCGGT+GGG | - | chr5.1:65487690-65487709 | MS.gene071221:intron | 60.0% |
| CAGTGTGGGGCGCATGCCTT+AGG | - | chr5.1:65485877-65485896 | MS.gene071221:intron | 65.0% | |
| ! | GTGCCTGTTTGGTTCCGCGG+TGG | - | chr5.1:65487689-65487708 | MS.gene071221:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 65483262 | 65488901 | 65483262 | ID=MS.gene071221 |
| chr5.1 | mRNA | 65483262 | 65488901 | 65483262 | ID=MS.gene071221.t1;Parent=MS.gene071221 |
| chr5.1 | exon | 65488584 | 65488901 | 65488584 | ID=MS.gene071221.t1.exon1;Parent=MS.gene071221.t1 |
| chr5.1 | CDS | 65488584 | 65488901 | 65488584 | ID=cds.MS.gene071221.t1;Parent=MS.gene071221.t1 |
| chr5.1 | exon | 65485502 | 65485651 | 65485502 | ID=MS.gene071221.t1.exon2;Parent=MS.gene071221.t1 |
| chr5.1 | CDS | 65485502 | 65485651 | 65485502 | ID=cds.MS.gene071221.t1;Parent=MS.gene071221.t1 |
| chr5.1 | exon | 65485225 | 65485392 | 65485225 | ID=MS.gene071221.t1.exon3;Parent=MS.gene071221.t1 |
| chr5.1 | CDS | 65485225 | 65485392 | 65485225 | ID=cds.MS.gene071221.t1;Parent=MS.gene071221.t1 |
| chr5.1 | exon | 65483262 | 65483363 | 65483262 | ID=MS.gene071221.t1.exon4;Parent=MS.gene071221.t1 |
| chr5.1 | CDS | 65483262 | 65483363 | 65483262 | ID=cds.MS.gene071221.t1;Parent=MS.gene071221.t1 |
| Gene Sequence |
| Protein sequence |
