Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071380.t1 | KEH21015.1 | 97.8 | 324 | 7 | 0 | 1 | 324 | 57 | 380 | 2.30E-180 | 641.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071380.t1 | Q8VY78 | 71.6 | 320 | 91 | 0 | 4 | 323 | 2 | 321 | 4.0e-136 | 485.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071380.t1 | A0A072U588 | 97.8 | 324 | 7 | 0 | 1 | 324 | 57 | 380 | 1.7e-180 | 641.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene071380 | 0.806948 | 6.42E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene071380 | 0.809873 | 1.53E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene071380 | 0.829932 | 3.90E-55 | -1.69E-46 |
| MS.gene051198 | MS.gene071380 | 0.829191 | 5.91E-55 | -1.69E-46 |
| MS.gene05157 | MS.gene071380 | 0.815786 | 7.74E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene071380 | 0.850982 | 1.19E-60 | -1.69E-46 |
| MS.gene051800 | MS.gene071380 | 0.819573 | 1.08E-52 | -1.69E-46 |
| MS.gene052036 | MS.gene071380 | 0.816972 | 4.20E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene071380 | 0.806396 | 8.40E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene071380 | 0.81226 | 4.64E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene071380 | 0.801573 | 8.45E-49 | -1.69E-46 |
| MS.gene053100 | MS.gene071380 | -0.811721 | 6.08E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene071380 | 0.811542 | 6.64E-51 | -1.69E-46 |
| MS.gene053542 | MS.gene071380 | 0.803523 | 3.35E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene071380 | 0.825058 | 5.76E-54 | -1.69E-46 |
| MS.gene055694 | MS.gene071380 | 0.828608 | 8.18E-55 | -1.69E-46 |
| MS.gene056050 | MS.gene071380 | 0.861004 | 1.39E-63 | -1.69E-46 |
| MS.gene056308 | MS.gene071380 | 0.823142 | 1.62E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene071380 | 0.819837 | 9.42E-53 | -1.69E-46 |
| MS.gene056507 | MS.gene071380 | 0.82992 | 3.93E-55 | -1.69E-46 |
| MS.gene056973 | MS.gene071380 | 0.80712 | 5.90E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene071380 | 0.807364 | 5.24E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene071380 | 0.816952 | 4.24E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene071380 | 0.82747 | 1.54E-54 | -1.69E-46 |
| MS.gene05847 | MS.gene071380 | 0.809644 | 1.71E-50 | -1.69E-46 |
| MS.gene058919 | MS.gene071380 | 0.803593 | 3.24E-49 | -1.69E-46 |
| MS.gene05894 | MS.gene071380 | 0.810447 | 1.15E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene071380 | 0.801479 | 8.83E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene071380 | 0.836257 | 1.04E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071380 | MS.gene030454 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071380.t1 | MTR_8g096740 | 97.840 | 324 | 7 | 0 | 1 | 324 | 57 | 380 | 0.0 | 659 |
| MS.gene071380.t1 | MTR_8g096740 | 97.909 | 287 | 6 | 0 | 1 | 287 | 1 | 287 | 0.0 | 585 |
| MS.gene071380.t1 | MTR_5g072480 | 35.669 | 157 | 95 | 3 | 15 | 171 | 176 | 326 | 1.72e-14 | 74.7 |
| MS.gene071380.t1 | MTR_5g072480 | 35.669 | 157 | 95 | 3 | 15 | 171 | 177 | 327 | 1.74e-14 | 74.7 |
| MS.gene071380.t1 | MTR_4g048220 | 28.358 | 201 | 128 | 6 | 10 | 207 | 2 | 189 | 3.14e-14 | 73.6 |
| MS.gene071380.t1 | MTR_4g048220 | 28.358 | 201 | 128 | 6 | 10 | 207 | 2 | 189 | 3.25e-14 | 72.8 |
| MS.gene071380.t1 | MTR_4g048220 | 28.358 | 201 | 128 | 6 | 10 | 207 | 2 | 189 | 4.02e-14 | 73.2 |
| MS.gene071380.t1 | MTR_4g048220 | 28.358 | 201 | 128 | 6 | 10 | 207 | 2 | 189 | 4.15e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071380.t1 | AT4G24940 | 71.562 | 320 | 91 | 0 | 4 | 323 | 2 | 321 | 4.01e-178 | 496 |
| MS.gene071380.t1 | AT5G50680 | 71.519 | 316 | 90 | 0 | 4 | 319 | 2 | 317 | 7.69e-174 | 484 |
| MS.gene071380.t1 | AT5G50580 | 71.519 | 316 | 90 | 0 | 4 | 319 | 2 | 317 | 7.69e-174 | 484 |
| MS.gene071380.t1 | AT5G50680 | 70.886 | 316 | 90 | 1 | 4 | 319 | 2 | 315 | 1.43e-170 | 476 |
| MS.gene071380.t1 | AT5G50580 | 70.886 | 316 | 90 | 1 | 4 | 319 | 2 | 315 | 1.43e-170 | 476 |
| MS.gene071380.t1 | AT2G30110 | 36.943 | 157 | 93 | 2 | 15 | 171 | 77 | 227 | 1.01e-16 | 81.6 |
| MS.gene071380.t1 | AT5G06460 | 34.395 | 157 | 97 | 3 | 15 | 171 | 74 | 224 | 1.46e-14 | 75.1 |
| MS.gene071380.t1 | AT2G32410 | 30.556 | 144 | 94 | 3 | 10 | 150 | 2 | 142 | 8.42e-13 | 68.9 |
| MS.gene071380.t1 | AT2G32410 | 30.556 | 144 | 94 | 3 | 10 | 150 | 2 | 142 | 9.10e-13 | 69.3 |
| MS.gene071380.t1 | AT2G32410 | 30.556 | 144 | 94 | 3 | 10 | 150 | 2 | 142 | 1.07e-12 | 68.9 |
| MS.gene071380.t1 | AT1G05180 | 29.371 | 143 | 95 | 3 | 16 | 155 | 24 | 163 | 2.30e-11 | 65.1 |
Find 0 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAAAGTTATATTGTT+TGG | + | 57542:13301-13320 | MS.gene071380:intron | 10.0% |
| !! | TAAATAAATTAGCAAAAATT+AGG | - | 57542:12994-13013 | MS.gene071380:intergenic | 10.0% |
| !!! | AAAATAGAAAAAGTTTTTTA+TGG | - | 57542:18477-18496 | MS.gene071380:intergenic | 10.0% |
| !!! | AAATAGAAAAAGTTTTTTAT+GGG | - | 57542:18476-18495 | MS.gene071380:intergenic | 10.0% |
| !! | AAAATCCATTAATTAAACTT+AGG | + | 57542:16805-16824 | MS.gene071380:intron | 15.0% |
| !! | AAATCCATTAATTAAACTTA+GGG | + | 57542:16806-16825 | MS.gene071380:intron | 15.0% |
| !! | TAGTAATTTAGAAAATAGAA+AGG | - | 57542:12938-12957 | MS.gene071380:intergenic | 15.0% |
| !! | TGAACAATTAAAATTACAAT+TGG | - | 57542:14855-14874 | MS.gene071380:intergenic | 15.0% |
| !! | TTCTTATAAAAAAAATGGTT+TGG | - | 57542:15227-15246 | MS.gene071380:intergenic | 15.0% |
| !!! | TTTTTTCCTAATGATTTATT+AGG | + | 57542:13606-13625 | MS.gene071380:intron | 15.0% |
| !! | AAAAAGAAAACAACTTGATA+AGG | - | 57542:13869-13888 | MS.gene071380:intergenic | 20.0% |
| !! | AAAAGAAAACAACTTGATAA+GGG | - | 57542:13868-13887 | MS.gene071380:intergenic | 20.0% |
| !! | AAAAGAGAAAAATCAGAAAA+TGG | - | 57542:15352-15371 | MS.gene071380:intergenic | 20.0% |
| !! | AAAGAAGATAATCAATGTAA+AGG | - | 57542:14497-14516 | MS.gene071380:intergenic | 20.0% |
| !! | AAGAAGATAATCAATGTAAA+GGG | - | 57542:14496-14515 | MS.gene071380:intergenic | 20.0% |
| !! | AATTTAGAAAATAGAAAGGA+AGG | - | 57542:12934-12953 | MS.gene071380:intergenic | 20.0% |
| !! | AGCAGTTCTTATAAAAAAAA+TGG | - | 57542:15232-15251 | MS.gene071380:intergenic | 20.0% |
| !! | AGTATTCTTAATGATGTTTA+TGG | + | 57542:14767-14786 | MS.gene071380:intron | 20.0% |
| !! | ATTTACTATTGTAACATTAC+AGG | + | 57542:18418-18437 | MS.gene071380:intron | 20.0% |
| !! | TAATGTTACAATAGTAAATC+TGG | - | 57542:18417-18436 | MS.gene071380:intergenic | 20.0% |
| !! | TTCCACATAAAAAATATCAT+TGG | - | 57542:16874-16893 | MS.gene071380:intergenic | 20.0% |
| !!! | AAAAGCTATTTCTATAACTA+AGG | + | 57542:13277-13296 | MS.gene071380:intron | 20.0% |
| !!! | AAAGTAACTTTTGTTAGTTT+AGG | + | 57542:12962-12981 | MS.gene071380:intron | 20.0% |
| !!! | AGACTTCAAGTTTTTTTTTT+TGG | + | 57542:13911-13930 | MS.gene071380:intron | 20.0% |
| !!! | CAATTTTTATAGACATAGTT+CGG | + | 57542:16378-16397 | MS.gene071380:intron | 20.0% |
| !!! | GACTTCAAGTTTTTTTTTTT+GGG | + | 57542:13912-13931 | MS.gene071380:intron | 20.0% |
| !!! | GGATTTTTAACAAAAGATAA+AGG | - | 57542:16792-16811 | MS.gene071380:intergenic | 20.0% |
| !!! | TTCCAATGATATTTTTTATG+TGG | + | 57542:16869-16888 | MS.gene071380:intron | 20.0% |
| ! | AAAATTGTATAGAGACAGAT+CGG | - | 57542:15197-15216 | MS.gene071380:intergenic | 25.0% |
| ! | AAAGAAAACAACTTGATAAG+GGG | - | 57542:13867-13886 | MS.gene071380:intergenic | 25.0% |
| ! | AAATAGAAGATCTGCAATTA+CGG | + | 57542:17190-17209 | MS.gene071380:intron | 25.0% |
| ! | AAGAAAAAGAATCAGAGATA+TGG | - | 57542:15275-15294 | MS.gene071380:intergenic | 25.0% |
| ! | AAGAACCTGTAAGATAATTT+CGG | - | 57542:13518-13537 | MS.gene071380:intergenic | 25.0% |
| ! | AAGACCCTAAGTTTAATTAA+TGG | - | 57542:16813-16832 | MS.gene071380:intergenic | 25.0% |
| ! | AATAGAGAGAATGAAAGAAA+AGG | + | 57542:16222-16241 | MS.gene071380:intron | 25.0% |
| ! | ACATAATTGCTTATGATAAG+TGG | - | 57542:13347-13366 | MS.gene071380:intergenic | 25.0% |
| ! | AGAAAAAGAATCAGAGATAT+GGG | - | 57542:15274-15293 | MS.gene071380:intergenic | 25.0% |
| ! | ATAGAGAGAATGAAAGAAAA+GGG | + | 57542:16223-16242 | MS.gene071380:intron | 25.0% |
| ! | ATCATGAAAATAAATGCATG+GGG | - | 57542:14536-14555 | MS.gene071380:intergenic | 25.0% |
| ! | ATTGATATCACATTTATCTC+AGG | + | 57542:14883-14902 | MS.gene071380:intron | 25.0% |
| ! | ATTTATGACACTGATGAATA+TGG | + | 57542:14586-14605 | MS.gene071380:intron | 25.0% |
| ! | CAAAAAAAGAATCAGATATG+TGG | + | 57542:16306-16325 | MS.gene071380:intron | 25.0% |
| ! | CAAAGTCCTAATAAATCATT+AGG | - | 57542:13615-13634 | MS.gene071380:intergenic | 25.0% |
| ! | CATCATGAAAATAAATGCAT+GGG | - | 57542:14537-14556 | MS.gene071380:intergenic | 25.0% |
| ! | CTAAAATGTTCATCACAATT+AGG | + | 57542:14918-14937 | MS.gene071380:intron | 25.0% |
| ! | CTAATGATTTATTAGGACTT+TGG | + | 57542:13613-13632 | MS.gene071380:intron | 25.0% |
| ! | GATCTTCTATGTATATGTTT+GGG | + | 57542:17237-17256 | MS.gene071380:intron | 25.0% |
| ! | GCAGTTCTTCATAAAATAAA+CGG | + | 57542:16349-16368 | MS.gene071380:intron | 25.0% |
| ! | GGATAAAATGTGTGAAATAA+AGG | + | 57542:17557-17576 | MS.gene071380:intron | 25.0% |
| ! | GTACTTCTAAACTATTGTTA+TGG | - | 57542:14983-15002 | MS.gene071380:intergenic | 25.0% |
| ! | TCATATGATAACCAATAGTT+AGG | + | 57542:14395-14414 | MS.gene071380:intron | 25.0% |
| ! | TCATCATGAAAATAAATGCA+TGG | - | 57542:14538-14557 | MS.gene071380:intergenic | 25.0% |
| ! | TCTTCATAAAATAAACGGTT+TGG | + | 57542:16354-16373 | MS.gene071380:intron | 25.0% |
| ! | TGATCTTCTATGTATATGTT+TGG | + | 57542:17236-17255 | MS.gene071380:intron | 25.0% |
| ! | TTAAACTGTTTATCCAAACA+TGG | - | 57542:13212-13231 | MS.gene071380:intergenic | 25.0% |
| ! | TTCTAAACTATTGTTATGGT+CGG | - | 57542:14979-14998 | MS.gene071380:intergenic | 25.0% |
| ! | TTGTGAAAAACAAGTTATCT+TGG | + | 57542:13428-13447 | MS.gene071380:intron | 25.0% |
| ! | TTTAATGTTCAATTCTTCCT+TGG | + | 57542:16665-16684 | MS.gene071380:intron | 25.0% |
| !! | TTAAATAAGGCATTCCAAAA+AGG | + | 57542:13554-13573 | MS.gene071380:intron | 25.0% |
| !!! | AACTGCTATACCATTTTTTT+TGG | + | 57542:15245-15264 | MS.gene071380:intron | 25.0% |
| !!! | ACAGTTTAATTTGAAGCTTA+TGG | + | 57542:13223-13242 | MS.gene071380:intron | 25.0% |
| !!! | AGCAATTTGTTACAAAGATA+TGG | - | 57542:16575-16594 | MS.gene071380:intergenic | 25.0% |
| !!! | GCAATTTGTTACAAAGATAT+GGG | - | 57542:16574-16593 | MS.gene071380:intergenic | 25.0% |
| !!! | TAGTTGATTTGGTTTCATTT+TGG | + | 57542:17753-17772 | MS.gene071380:intron | 25.0% |
| !!! | TGCATTTATTTTCATGATGA+TGG | + | 57542:14538-14557 | MS.gene071380:intron | 25.0% |
| !!! | TTTTACACTTGTTTTCTTTG+TGG | + | 57542:13886-13905 | MS.gene071380:intron | 25.0% |
| !!! | TTTTGGATTTACTGTTGATT+TGG | + | 57542:17770-17789 | MS.gene071380:intron | 25.0% |
| AAAAATAGACTCTTAAGTCG+TGG | - | 57542:15842-15861 | None:intergenic | 30.0% | |
| AAACCTATCACTTGTCTATA+TGG | + | 57542:13153-13172 | MS.gene071380:intron | 30.0% | |
| AAAGCTCATGTCTTAGTTTA+TGG | + | 57542:13106-13125 | MS.gene071380:CDS | 30.0% | |
| AACCAATAGTTAGGCATATA+CGG | + | 57542:14404-14423 | MS.gene071380:intron | 30.0% | |
| AACCTAAATACCTCAAAACT+TGG | - | 57542:16733-16752 | MS.gene071380:intergenic | 30.0% | |
| AATTGCAATCGATAAACTTC+AGG | - | 57542:17997-18016 | MS.gene071380:intergenic | 30.0% | |
| AGAGAAAAATCAGAAAATGG+TGG | - | 57542:15349-15368 | MS.gene071380:intergenic | 30.0% | |
| AGAGAATCTAATGTACAACA+TGG | - | 57542:17105-17124 | MS.gene071380:intergenic | 30.0% | |
| AGGTTATCAAAGCAATTTCT+GGG | + | 57542:18441-18460 | MS.gene071380:CDS | 30.0% | |
| AGTAATAGAGAAGTTTGAAG+AGG | + | 57542:18070-18089 | MS.gene071380:intron | 30.0% | |
| AGTATAAAATGCTACACGTT+TGG | - | 57542:14190-14209 | MS.gene071380:intergenic | 30.0% | |
| ATATGGGGAACCAAAAAAAA+TGG | - | 57542:15258-15277 | MS.gene071380:intergenic | 30.0% | |
| ATCCTGTAGCAAAAAGAAAA+AGG | - | 57542:17446-17465 | MS.gene071380:intergenic | 30.0% | |
| ATCTAATGCAAGTAAATGAC+TGG | - | 57542:16966-16985 | MS.gene071380:intergenic | 30.0% | |
| ATTAAACCACTAATCCAGTT+CGG | - | 57542:15039-15058 | MS.gene071380:intergenic | 30.0% | |
| CAATGTTCTTAAGCTGAAAA+AGG | + | 57542:18136-18155 | MS.gene071380:CDS | 30.0% | |
| CAGCTAACATTATAACAGTT+TGG | + | 57542:16421-16440 | MS.gene071380:intron | 30.0% | |
| CTACAAATGATTGTATTACG+AGG | + | 57542:15399-15418 | MS.gene071380:intron | 30.0% | |
| CTTAATGATGTTTATGGTAG+TGG | + | 57542:14773-14792 | MS.gene071380:intron | 30.0% | |
| GAAAAAGAATCAGAGATATG+GGG | - | 57542:15273-15292 | MS.gene071380:intergenic | 30.0% | |
| GAACATATTGAGAGTCTTTA+GGG | - | 57542:16852-16871 | MS.gene071380:intergenic | 30.0% | |
| GAATGAAAGAAAAGGGAAAA+TGG | + | 57542:16230-16249 | MS.gene071380:intron | 30.0% | |
| GACATATCTGATTCAAATAC+TGG | + | 57542:18527-18546 | MS.gene071380:CDS | 30.0% | |
| GCAGGACTATAAATATCAAA+AGG | + | 57542:14251-14270 | MS.gene071380:CDS | 30.0% | |
| GTCTTAGTTTATGGAATGAA+AGG | + | 57542:13115-13134 | MS.gene071380:CDS | 30.0% | |
| TAAAATGCAACAATGATGAC+AGG | - | 57542:16758-16777 | MS.gene071380:intergenic | 30.0% | |
| TACTATTGTAACATTACAGG+AGG | + | 57542:18421-18440 | MS.gene071380:intron | 30.0% | |
| TAGATTGGCAATGTGAAATT+AGG | + | 57542:16143-16162 | MS.gene071380:intron | 30.0% | |
| TATGTATGTCGAATTTGAAC+CGG | + | 57542:14348-14367 | MS.gene071380:intron | 30.0% | |
| TATTCAAGTCAATTAAGAGC+TGG | + | 57542:17586-17605 | MS.gene071380:intron | 30.0% | |
| TCAAATTCGACATACATACT+CGG | - | 57542:14346-14365 | MS.gene071380:intergenic | 30.0% | |
| TCAGTTGACAAGCTTAAATA+AGG | + | 57542:13541-13560 | MS.gene071380:intron | 30.0% | |
| TCTAATGCAAGTAAATGACT+GGG | - | 57542:16965-16984 | MS.gene071380:intergenic | 30.0% | |
| TGAAGTTAGAACTTGAAGAA+TGG | + | 57542:16033-16052 | MS.gene071380:intron | 30.0% | |
| TGACTTAGACCAACATAATT+AGG | + | 57542:13186-13205 | MS.gene071380:intron | 30.0% | |
| TGTAATGTAAACAGAAGGAT+TGG | - | 57542:18233-18252 | MS.gene071380:intergenic | 30.0% | |
| TGTTATAATGTTAGCTGAAC+CGG | - | 57542:16418-16437 | MS.gene071380:intergenic | 30.0% | |
| TTAAAAAAAAACGGTGGTGT+TGG | + | 57542:16089-16108 | MS.gene071380:intron | 30.0% | |
| TTACCATATAGACAAGTGAT+AGG | - | 57542:13159-13178 | MS.gene071380:intergenic | 30.0% | |
| TTCTTCTTCAAACTATGCTA+CGG | - | 57542:16204-16223 | MS.gene071380:intergenic | 30.0% | |
| ! | AAAAAGAAAAAGGCATACCT+AGG | - | 57542:17436-17455 | MS.gene071380:intergenic | 30.0% |
| ! | AGCTTTGATGTAGAATTCTT+CGG | + | 57542:13997-14016 | MS.gene071380:CDS | 30.0% |
| ! | AGGTATTTTATTGGTCATCA+TGG | + | 57542:18357-18376 | MS.gene071380:intron | 30.0% |
| ! | CCTAAAATATCCAAGTTTTG+AGG | + | 57542:16720-16739 | MS.gene071380:CDS | 30.0% |
| ! | CCTCAAAACTTGGATATTTT+AGG | - | 57542:16723-16742 | MS.gene071380:intergenic | 30.0% |
| ! | GTGCTAATTATCTAGAACTT+TGG | - | 57542:16608-16627 | MS.gene071380:intergenic | 30.0% |
| ! | GTTTAGAACTTCATATTCCT+AGG | + | 57542:17416-17435 | MS.gene071380:intron | 30.0% |
| ! | GTTTTGCAAGAATATTGTTC+TGG | + | 57542:13651-13670 | MS.gene071380:intron | 30.0% |
| ! | TACATAGCATGTGTTTGTTT+TGG | - | 57542:17341-17360 | MS.gene071380:intergenic | 30.0% |
| ! | TCATCAACTATGTTGATGAA+GGG | + | 57542:15590-15609 | MS.gene071380:intron | 30.0% |
| ! | TGTTGGCTATTTGACAATAA+TGG | + | 57542:16515-16534 | MS.gene071380:intron | 30.0% |
| !! | ACGAGATTTTGATAGAAGAT+AGG | - | 57542:15869-15888 | MS.gene071380:intergenic | 30.0% |
| !! | ATAGTTTAGAAGTACTGAAC+TGG | + | 57542:14988-15007 | MS.gene071380:intron | 30.0% |
| !! | ATGGAAGATGCAATTTTGAT+AGG | + | 57542:15667-15686 | MS.gene071380:intron | 30.0% |
| !! | CAAAACTTGGATATTTTAGG+TGG | - | 57542:16720-16739 | MS.gene071380:intergenic | 30.0% |
| !! | CGAGATTTTGATAGAAGATA+GGG | - | 57542:15868-15887 | MS.gene071380:intergenic | 30.0% |
| !! | TGTAACAAATTGCTTTTGCT+GGG | + | 57542:16581-16600 | MS.gene071380:intron | 30.0% |
| !! | TTGTAACAAATTGCTTTTGC+TGG | + | 57542:16580-16599 | MS.gene071380:intron | 30.0% |
| !!! | ATCCAAGTTTTGAGGTATTT+AGG | + | 57542:16728-16747 | MS.gene071380:intron | 30.0% |
| !!! | ATGTGTTTGTTTTGGACATA+AGG | - | 57542:17333-17352 | MS.gene071380:intergenic | 30.0% |
| !!! | CTTTTTCAGCTTAAGAACAT+TGG | - | 57542:18138-18157 | MS.gene071380:intergenic | 30.0% |
| !!! | TAAGCTATGCAACTTTTTTG+TGG | + | 57542:17536-17555 | MS.gene071380:intron | 30.0% |
| !!! | TCTATTTTGATGCTTCTGAT+GGG | + | 57542:18489-18508 | MS.gene071380:CDS | 30.0% |
| !!! | TTCTATTTTGATGCTTCTGA+TGG | + | 57542:18488-18507 | MS.gene071380:CDS | 30.0% |
| !!! | TTGGTAACGCATTTTGTTTT+CGG | - | 57542:14461-14480 | MS.gene071380:intergenic | 30.0% |
| !!! | TTGGTTTTGCTTTAAGACAA+TGG | + | 57542:17152-17171 | MS.gene071380:intron | 30.0% |
| AAAACAACTTGATAAGGGGA+GGG | - | 57542:13863-13882 | None:intergenic | 35.0% | |
| AAAAGGCTTAGTGTGTGAAA+TGG | + | 57542:13571-13590 | MS.gene071380:intron | 35.0% | |
| AAAGGCTTAGTGTGTGAAAT+GGG | + | 57542:13572-13591 | MS.gene071380:intron | 35.0% | |
| AACAAGAGATCAATTGTGAC+CGG | - | 57542:14370-14389 | MS.gene071380:intergenic | 35.0% | |
| AACTAGCCAATGAAAAATGC+CGG | + | 57542:14157-14176 | MS.gene071380:CDS | 35.0% | |
| AAGCGGTGATGTGAAAAATT+GGG | - | 57542:15315-15334 | MS.gene071380:intergenic | 35.0% | |
| AATAAATGCATGGGGATTGA+CGG | - | 57542:14528-14547 | MS.gene071380:intergenic | 35.0% | |
| AATCCAGTTCAGTTCAGTTT+GGG | - | 57542:15137-15156 | MS.gene071380:intergenic | 35.0% | |
| AATGAAAGGAACTATTGCTG+AGG | + | 57542:13129-13148 | MS.gene071380:CDS | 35.0% | |
| ACAAACACACAAGCTTCTAA+AGG | + | 57542:17288-17307 | MS.gene071380:intron | 35.0% | |
| ACCAAATATCCTTCATGTCA+AGG | - | 57542:16919-16938 | MS.gene071380:intergenic | 35.0% | |
| ACCAATAAAATACCTGTCCA+AGG | - | 57542:18352-18371 | MS.gene071380:intergenic | 35.0% | |
| ACCTTGACATGAAGGATATT+TGG | + | 57542:16915-16934 | MS.gene071380:intron | 35.0% | |
| AGATATGGGCAAAACAAACA+AGG | - | 57542:16560-16579 | MS.gene071380:intergenic | 35.0% | |
| AGTAGCAAAAACATGGAAGA+AGG | - | 57542:14083-14102 | MS.gene071380:intergenic | 35.0% | |
| AGTATAGAAACATGCCCTAA+TGG | + | 57542:17914-17933 | MS.gene071380:intron | 35.0% | |
| AGTCAGTAAGGGAAAATTTG+AGG | + | 57542:14675-14694 | MS.gene071380:intron | 35.0% | |
| ATCAACTAAAGCAATCAGGT+TGG | - | 57542:17741-17760 | MS.gene071380:intergenic | 35.0% | |
| ATCACAATTAGGACTGTTCA+TGG | + | 57542:14929-14948 | MS.gene071380:intron | 35.0% | |
| ATCCGTATATGCCTAACTAT+TGG | - | 57542:14409-14428 | MS.gene071380:intergenic | 35.0% | |
| ATGAATTGAACATAACCCCA+TGG | - | 57542:16991-17010 | MS.gene071380:intergenic | 35.0% | |
| ATGTGATAACCTTGACATGA+AGG | + | 57542:16907-16926 | MS.gene071380:intron | 35.0% | |
| CAAACATGGCCTAATTATGT+TGG | - | 57542:13198-13217 | MS.gene071380:intergenic | 35.0% | |
| CAACATAATTAGGCCATGTT+TGG | + | 57542:13196-13215 | MS.gene071380:intron | 35.0% | |
| CAATGTAAAGGGAAGTAACA+CGG | - | 57542:14485-14504 | MS.gene071380:intergenic | 35.0% | |
| CATAGAAGATCAACACAGAA+TGG | - | 57542:17228-17247 | MS.gene071380:intergenic | 35.0% | |
| CCAAATCAACTAAAGCAATC+AGG | - | 57542:17745-17764 | MS.gene071380:intergenic | 35.0% | |
| CCATTATACACATTCTCATC+AGG | - | 57542:13754-13773 | MS.gene071380:intergenic | 35.0% | |
| CCTGATGAGAATGTGTATAA+TGG | + | 57542:13751-13770 | MS.gene071380:CDS | 35.0% | |
| CCTGATTGCTTTAGTTGATT+TGG | + | 57542:17742-17761 | MS.gene071380:intron | 35.0% | |
| GAAACAATACTCTTAAGTCG+TGG | + | 57542:15700-15719 | MS.gene071380:intron | 35.0% | |
| GAGACTGTAATGTAAACAGA+AGG | - | 57542:18238-18257 | MS.gene071380:intergenic | 35.0% | |
| GAGGTTATCAAAGCAATTTC+TGG | + | 57542:18440-18459 | MS.gene071380:CDS | 35.0% | |
| GATGACACTTCATCATTGTT+CGG | - | 57542:15575-15594 | MS.gene071380:intergenic | 35.0% | |
| GCTTAAAGACTTCAATCCTA+TGG | + | 57542:13804-13823 | MS.gene071380:CDS | 35.0% | |
| GGAACATATTGAGAGTCTTT+AGG | - | 57542:16853-16872 | MS.gene071380:intergenic | 35.0% | |
| GGTGTCTGGTCTAATATATT+AGG | + | 57542:17623-17642 | MS.gene071380:intron | 35.0% | |
| GTTCTCCGAAATTATCTTAC+AGG | + | 57542:13510-13529 | MS.gene071380:intron | 35.0% | |
| GTTTCCTGCTTTATGTGATT+TGG | - | 57542:14702-14721 | MS.gene071380:intergenic | 35.0% | |
| TAAAGTCATCATCGTCTGTA+AGG | + | 57542:14620-14639 | MS.gene071380:intron | 35.0% | |
| TAATCCAGTTCAGTTCAGTT+TGG | - | 57542:15138-15157 | MS.gene071380:intergenic | 35.0% | |
| TCTTCCTTGGCAGAAAAAAA+TGG | + | 57542:16678-16697 | MS.gene071380:intron | 35.0% | |
| TCTTCTTCAAACTATGCTAC+GGG | - | 57542:16203-16222 | MS.gene071380:intergenic | 35.0% | |
| TGAAAGAAAAGGGAAAATGG+TGG | + | 57542:16233-16252 | MS.gene071380:intron | 35.0% | |
| TGAATTGAACATAACCCCAT+GGG | - | 57542:16990-17009 | MS.gene071380:intergenic | 35.0% | |
| TGCATCTTCCATTCTATCTA+CGG | - | 57542:15659-15678 | MS.gene071380:intergenic | 35.0% | |
| TGGCAATGTGAAATTAGGAA+GGG | + | 57542:16148-16167 | MS.gene071380:intron | 35.0% | |
| TGTACATTAGATTCTCTTGC+AGG | + | 57542:17108-17127 | MS.gene071380:intron | 35.0% | |
| TGTGACAAATTAGATCCACA+GGG | - | 57542:14283-14302 | MS.gene071380:intergenic | 35.0% | |
| TTATACACATTCTCATCAGG+AGG | - | 57542:13751-13770 | MS.gene071380:intergenic | 35.0% | |
| TTCTAGATAATTAGCACCTG+TGG | + | 57542:16611-16630 | MS.gene071380:intron | 35.0% | |
| TTGGCAATGTGAAATTAGGA+AGG | + | 57542:16147-16166 | MS.gene071380:intron | 35.0% | |
| TTTGTATGACCGTCAGATTA+GGG | + | 57542:12881-12900 | MS.gene071380:CDS | 35.0% | |
| ! | AAGGAGTTTTCACTGTACTT+TGG | - | 57542:14064-14083 | MS.gene071380:intergenic | 35.0% |
| ! | ACTCCTAATTTTTCACACCA+CGG | - | 57542:16272-16291 | MS.gene071380:intergenic | 35.0% |
| ! | ATCAAAGCAATTTCTGGGAA+AGG | + | 57542:18446-18465 | MS.gene071380:CDS | 35.0% |
| ! | CAGTTAATTTCAGTGCGTTT+TGG | - | 57542:14830-14849 | MS.gene071380:intergenic | 35.0% |
| ! | GTCATCAACTATGTTGATGA+AGG | + | 57542:15589-15608 | MS.gene071380:intron | 35.0% |
| ! | TCAAAGCAATTTCTGGGAAA+GGG | + | 57542:18447-18466 | MS.gene071380:CDS | 35.0% |
| ! | TCCTTGGACAGGTATTTTAT+TGG | + | 57542:18348-18367 | MS.gene071380:intron | 35.0% |
| ! | TGAAGTTTTTGTTGATCTGC+AGG | + | 57542:14233-14252 | MS.gene071380:CDS | 35.0% |
| ! | TGATACTCTTCTGGAAAGAT+TGG | + | 57542:18277-18296 | MS.gene071380:CDS | 35.0% |
| ! | TGCCTTTTTCTTTTTGCTAC+AGG | + | 57542:17441-17460 | MS.gene071380:intron | 35.0% |
| ! | TTTCACACACTAAGCCTTTT+TGG | - | 57542:13571-13590 | MS.gene071380:intergenic | 35.0% |
| !! | AATCTTTCCAGAAGAGTATC+AGG | - | 57542:18278-18297 | MS.gene071380:intergenic | 35.0% |
| !! | ATAGTTTAGAAGTACTGACC+TGG | + | 57542:15097-15116 | MS.gene071380:intron | 35.0% |
| !! | ATATTGAGAGTCTTTAGGGT+TGG | - | 57542:16848-16867 | MS.gene071380:intergenic | 35.0% |
| !! | CTGTTGATTTGGTTTCATCT+CGG | + | 57542:17781-17800 | MS.gene071380:intron | 35.0% |
| !! | GAACTGGATTAGTGGTTTAA+TGG | + | 57542:15038-15057 | MS.gene071380:intron | 35.0% |
| !! | TGATGTTTATGGTAGTGGAT+AGG | + | 57542:14778-14797 | MS.gene071380:intron | 35.0% |
| !!! | ATTTTCCCTTACTGACTTCT+AGG | - | 57542:14672-14691 | MS.gene071380:intergenic | 35.0% |
| !!! | CTTGTGTGTTTGTTTTGCAA+TGG | - | 57542:17281-17300 | MS.gene071380:intergenic | 35.0% |
| !!! | TTCACGGGTTAGTTTAGTTT+TGG | + | 57542:17704-17723 | MS.gene071380:intron | 35.0% |
| AAACAACTTGATAAGGGGAG+GGG | - | 57542:13862-13881 | MS.gene071380:intergenic | 40.0% | |
| AAGCCAGAGTAGCAAAAACA+TGG | - | 57542:14090-14109 | MS.gene071380:intergenic | 40.0% | |
| AAGCTGTACTTTGCAATGAG+AGG | + | 57542:17508-17527 | MS.gene071380:CDS | 40.0% | |
| AATCCAGTTCGGTTCAGTTT+GGG | - | 57542:15028-15047 | MS.gene071380:intergenic | 40.0% | |
| AATCTGACGGTCATACAAAG+CGG | - | 57542:12880-12899 | MS.gene071380:intergenic | 40.0% | |
| ACAAACTACAATCGACAGCT+AGG | - | 57542:16498-16517 | MS.gene071380:intergenic | 40.0% | |
| ACATTGCCAATCTACAAGTG+GGG | - | 57542:16137-16156 | MS.gene071380:intergenic | 40.0% | |
| ACCTAGTACATGACAGGAAA+AGG | - | 57542:17073-17092 | MS.gene071380:intergenic | 40.0% | |
| ACGGCGGCGTTAAAAAAAAA+CGG | + | 57542:16080-16099 | MS.gene071380:intron | 40.0% | |
| ACTAAGTTAAGCCAAGAGAG+AGG | + | 57542:17667-17686 | MS.gene071380:intron | 40.0% | |
| ACTGAACAGAACCATAACAG+TGG | - | 57542:16454-16473 | MS.gene071380:intergenic | 40.0% | |
| AGAGAAGTTGCCGGATTATT+TGG | + | 57542:15627-15646 | MS.gene071380:intron | 40.0% | |
| AGAGTGACAGTGTGTACAAA+TGG | + | 57542:15729-15748 | MS.gene071380:intron | 40.0% | |
| AGGACCAAATCACATAAAGC+AGG | + | 57542:14695-14714 | MS.gene071380:intron | 40.0% | |
| AGGCTCTATCACTAATTGCA+AGG | - | 57542:14652-14671 | MS.gene071380:intergenic | 40.0% | |
| ATAGAGCCTAGAAGTCAGTA+AGG | + | 57542:14663-14682 | MS.gene071380:intron | 40.0% | |
| ATCAACTTCTTCCTCACATC+TGG | + | 57542:15924-15943 | MS.gene071380:intron | 40.0% | |
| ATCACAACAAAGCTGAGCAA+TGG | - | 57542:13782-13801 | MS.gene071380:intergenic | 40.0% | |
| ATCCAGTTCAGTTCAGTTTG+GGG | - | 57542:15136-15155 | MS.gene071380:intergenic | 40.0% | |
| ATCTTCCATTCTATCTACGG+CGG | - | 57542:15656-15675 | MS.gene071380:intergenic | 40.0% | |
| ATGACGGTGAGTACAAATTG+TGG | - | 57542:15810-15829 | MS.gene071380:intergenic | 40.0% | |
| ATTGTTCAGAACCAATCGCT+TGG | + | 57542:15988-16007 | MS.gene071380:intron | 40.0% | |
| CACATTGCCAATCTACAAGT+GGG | - | 57542:16138-16157 | MS.gene071380:intergenic | 40.0% | |
| CGAGGTTTAGAAGAAGACAA+TGG | + | 57542:15417-15436 | MS.gene071380:intron | 40.0% | |
| CGGAAACAACCACTTGATTA+GGG | - | 57542:15555-15574 | MS.gene071380:intergenic | 40.0% | |
| CTCCAGTTTCTGCTGTTATT+GGG | + | 57542:18321-18340 | MS.gene071380:CDS | 40.0% | |
| CTGTGACAAATTAGATCCAC+AGG | - | 57542:14284-14303 | MS.gene071380:intergenic | 40.0% | |
| CTTCTTCAAACTATGCTACG+GGG | - | 57542:16202-16221 | MS.gene071380:intergenic | 40.0% | |
| CTTTGTATGACCGTCAGATT+AGG | + | 57542:12880-12899 | MS.gene071380:CDS | 40.0% | |
| GAAAACAACTTGATAAGGGG+AGG | - | 57542:13864-13883 | MS.gene071380:intergenic | 40.0% | |
| GAAGCGGTGATGTGAAAAAT+TGG | - | 57542:15316-15335 | MS.gene071380:intergenic | 40.0% | |
| GACAAGACGAACAAAAGAGA+AGG | - | 57542:13961-13980 | MS.gene071380:intergenic | 40.0% | |
| GACCTTAATTGACGATAGAC+CGG | + | 57542:13690-13709 | MS.gene071380:CDS | 40.0% | |
| GGAAACAACCACTTGATTAG+GGG | - | 57542:15554-15573 | MS.gene071380:intergenic | 40.0% | |
| GGCAATGTGAAATTAGGAAG+GGG | + | 57542:16149-16168 | MS.gene071380:intron | 40.0% | |
| GTGAAATTGTGAAGGGGTTT+GGG | - | 57542:15451-15470 | MS.gene071380:intergenic | 40.0% | |
| GTGACAAATTAGATCCACAG+GGG | - | 57542:14282-14301 | MS.gene071380:intergenic | 40.0% | |
| GTGATGTGAAAAATTGGGAG+TGG | - | 57542:15310-15329 | MS.gene071380:intergenic | 40.0% | |
| GTGGTGTGAAAAATTAGGAG+TGG | + | 57542:16271-16290 | MS.gene071380:intron | 40.0% | |
| GTTCGTGTCTTTGTGGAAAA+AGG | + | 57542:13826-13845 | MS.gene071380:CDS | 40.0% | |
| GTTGACTGTAGAGATTCTTG+CGG | + | 57542:14210-14229 | MS.gene071380:CDS | 40.0% | |
| TAAAGGGAAGTAACACGGTT+TGG | - | 57542:14480-14499 | MS.gene071380:intergenic | 40.0% | |
| TAAGCTCTCTCTCTCCATTA+GGG | - | 57542:17931-17950 | MS.gene071380:intergenic | 40.0% | |
| TAATCCAGTTCGGTTCAGTT+TGG | - | 57542:15029-15048 | MS.gene071380:intergenic | 40.0% | |
| TACTTGCATTAGATGCCCAT+GGG | + | 57542:16972-16991 | MS.gene071380:intron | 40.0% | |
| TAGAGCCTAGAAGTCAGTAA+GGG | + | 57542:14664-14683 | MS.gene071380:intron | 40.0% | |
| TCACATTGCCAATCTACAAG+TGG | - | 57542:16139-16158 | MS.gene071380:intergenic | 40.0% | |
| TCCAGTTTCTGCTGTTATTG+GGG | + | 57542:18322-18341 | MS.gene071380:CDS | 40.0% | |
| TCCTTGGCAGAAAAAAATGG+AGG | + | 57542:16681-16700 | MS.gene071380:intron | 40.0% | |
| TCGGAAACAACCACTTGATT+AGG | - | 57542:15556-15575 | MS.gene071380:intergenic | 40.0% | |
| TGAACAGCAATTGATACTGC+TGG | - | 57542:15499-15518 | MS.gene071380:intergenic | 40.0% | |
| TGCAAGAATATTGTTCTGGC+TGG | + | 57542:13655-13674 | MS.gene071380:CDS | 40.0% | |
| TGTGAAATTGTGAAGGGGTT+TGG | - | 57542:15452-15471 | MS.gene071380:intergenic | 40.0% | |
| TTACTTGCATTAGATGCCCA+TGG | + | 57542:16971-16990 | MS.gene071380:intron | 40.0% | |
| TTCGGTTCAAAATTCAGAGC+CGG | + | 57542:16396-16415 | MS.gene071380:intron | 40.0% | |
| TTTCACAGCACCAATGTCAT+CGG | + | 57542:15465-15484 | MS.gene071380:intron | 40.0% | |
| TTTGATGCTTCTGATGGGAA+GGG | + | 57542:18494-18513 | MS.gene071380:CDS | 40.0% | |
| ! | AATATTGTTCTGGCTGGAGT+TGG | + | 57542:13661-13680 | MS.gene071380:CDS | 40.0% |
| ! | ACTGAACTGAACTGGATTAG+CGG | + | 57542:15139-15158 | MS.gene071380:intron | 40.0% |
| ! | AGCTGTCGATTGTAGTTTGT+TGG | + | 57542:16498-16517 | MS.gene071380:intron | 40.0% |
| ! | AGCTTTCCGGCATTTTTCAT+TGG | - | 57542:14166-14185 | MS.gene071380:intergenic | 40.0% |
| ! | CAAAGCAATTTCTGGGAAAG+GGG | + | 57542:18448-18467 | MS.gene071380:CDS | 40.0% |
| ! | CTTTTGTTCGTCTTGTCTTC+AGG | + | 57542:13964-13983 | MS.gene071380:intron | 40.0% |
| ! | GCAGTATCAATTGCTGTTCA+AGG | + | 57542:15499-15518 | MS.gene071380:intron | 40.0% |
| ! | GGATTAGTGGTTTAATGGAG+CGG | + | 57542:15043-15062 | MS.gene071380:intron | 40.0% |
| ! | TCCTTTTCCTGTCATGTACT+AGG | + | 57542:17069-17088 | MS.gene071380:intron | 40.0% |
| ! | TTGGTTCTTCACCACTGTTA+TGG | + | 57542:16440-16459 | MS.gene071380:intron | 40.0% |
| ! | TTTTGATGCTTCTGATGGGA+AGG | + | 57542:18493-18512 | MS.gene071380:CDS | 40.0% |
| !! | AACTTTTAGTTGACGGTGTC+TGG | + | 57542:17609-17628 | MS.gene071380:intron | 40.0% |
| !! | CTTCCATGTTTTTGCTACTC+TGG | + | 57542:14084-14103 | MS.gene071380:intron | 40.0% |
| !! | GAGCTGGAACTTTTAGTTGA+CGG | + | 57542:17602-17621 | MS.gene071380:intron | 40.0% |
| !! | GTGGGTGGTCATTGATTTAT+TGG | - | 57542:15532-15551 | MS.gene071380:intergenic | 40.0% |
| !! | TGGTGCTGTGAAATTGTGAA+GGG | - | 57542:15458-15477 | MS.gene071380:intergenic | 40.0% |
| !! | TTGGTGCTGTGAAATTGTGA+AGG | - | 57542:15459-15478 | MS.gene071380:intergenic | 40.0% |
| !!! | AGTTGGGCAGTTTTTTTACC+AGG | - | 57542:14804-14823 | MS.gene071380:intergenic | 40.0% |
| !!! | TCCTCCATTTTTTTCTGCCA+AGG | - | 57542:16685-16704 | MS.gene071380:intergenic | 40.0% |
| !!! | TGGTGGTTTTAAGAGTGAAG+CGG | - | 57542:15332-15351 | MS.gene071380:intergenic | 40.0% |
| AAAGCAAGCACAGAATCCAC+AGG | - | 57542:16630-16649 | MS.gene071380:intergenic | 45.0% | |
| AACAACCACTTGATTAGGGG+TGG | - | 57542:15551-15570 | MS.gene071380:intergenic | 45.0% | |
| AACCTAGAGAACGCAAAGGT+TGG | + | 57542:14719-14738 | MS.gene071380:intron | 45.0% | |
| AAGTTAAGCCAAGAGAGAGG+TGG | + | 57542:17670-17689 | MS.gene071380:intron | 45.0% | |
| AATGACTGGGTAAGCCATCA+AGG | - | 57542:16952-16971 | MS.gene071380:intergenic | 45.0% | |
| ACAAATTAGATCCACAGGGG+TGG | - | 57542:14279-14298 | MS.gene071380:intergenic | 45.0% | |
| ACAACCACTTGATTAGGGGT+GGG | - | 57542:15550-15569 | MS.gene071380:intergenic | 45.0% | |
| ACCTAGACCTAGTACATGAC+AGG | - | 57542:17079-17098 | MS.gene071380:intergenic | 45.0% | |
| ACCTAGAGAACGCAAAGGTT+GGG | + | 57542:14720-14739 | MS.gene071380:intron | 45.0% | |
| ACGGCGGTTTCCAAATAATC+CGG | - | 57542:15640-15659 | MS.gene071380:intergenic | 45.0% | |
| ACTTGCATTAGATGCCCATG+GGG | + | 57542:16973-16992 | MS.gene071380:intron | 45.0% | |
| AGGAAACCTAGAGAACGCAA+AGG | + | 57542:14715-14734 | MS.gene071380:intron | 45.0% | |
| AGGATGCTCTATCAGTACCT+TGG | + | 57542:17461-17480 | MS.gene071380:intron | 45.0% | |
| AGTTGTGAGAGAGAAGTTGC+CGG | + | 57542:15618-15637 | MS.gene071380:intron | 45.0% | |
| ATCCAGTTCGGTTCAGTTTG+GGG | - | 57542:15027-15046 | MS.gene071380:intergenic | 45.0% | |
| ATCGCTGCAGGTTAAAGCAA+CGG | + | 57542:16061-16080 | MS.gene071380:intron | 45.0% | |
| ATGAAGGGATTCCAGATGTG+AGG | - | 57542:15938-15957 | MS.gene071380:intergenic | 45.0% | |
| ATGACCGTCAGATTAGGGTT+TGG | + | 57542:12886-12905 | MS.gene071380:CDS | 45.0% | |
| ATGCTCTATCAGTACCTTGG+AGG | + | 57542:17464-17483 | MS.gene071380:CDS | 45.0% | |
| CAAAGGTTGGGATGGATGAA+AGG | + | 57542:14732-14751 | MS.gene071380:intron | 45.0% | |
| CCAATAACAGCAGAAACTGG+AGG | - | 57542:18323-18342 | MS.gene071380:intergenic | 45.0% | |
| CCAGTTTCTGCTGTTATTGG+GGG | + | 57542:18323-18342 | MS.gene071380:CDS | 45.0% | |
| CCTCCAGTTTCTGCTGTTAT+TGG | + | 57542:18320-18339 | MS.gene071380:CDS | 45.0% | |
| CTACACGTTTGGAAGCTTTC+CGG | - | 57542:14179-14198 | MS.gene071380:intergenic | 45.0% | |
| GAAAGCAATTCCTCAGTGAC+CGG | - | 57542:13712-13731 | MS.gene071380:intergenic | 45.0% | |
| GAAGGACCTTCTTTGAGCAT+CGG | - | 57542:12916-12935 | MS.gene071380:intergenic | 45.0% | |
| GACCGGTCTATCGTCAATTA+AGG | - | 57542:13695-13714 | MS.gene071380:intergenic | 45.0% | |
| GAGAAGTTTGAAGAGGCTGA+AGG | + | 57542:18077-18096 | MS.gene071380:CDS | 45.0% | |
| GAGCCGTGGTGTGAAAAATT+AGG | + | 57542:16266-16285 | MS.gene071380:intron | 45.0% | |
| GCATGATCTATAAACCGCTG+CGG | - | 57542:15904-15923 | MS.gene071380:intergenic | 45.0% | |
| GCGGCGTTAAAAAAAAACGG+TGG | + | 57542:16083-16102 | MS.gene071380:intron | 45.0% | |
| GTAAGCTCTCTCTCTCCATT+AGG | - | 57542:17932-17951 | MS.gene071380:intergenic | 45.0% | |
| GTCGTGGAATCTGAGAATGA+CGG | - | 57542:15826-15845 | MS.gene071380:intergenic | 45.0% | |
| GTCTTTCATTCTATCCGCAG+CGG | + | 57542:15887-15906 | MS.gene071380:intron | 45.0% | |
| TACCCCAAACTGAACTGAAC+TGG | + | 57542:15131-15150 | MS.gene071380:intron | 45.0% | |
| TCAGAACCAATCGCTTGGTT+AGG | + | 57542:15993-16012 | MS.gene071380:intron | 45.0% | |
| TCATGTGCCTGATACTCTTC+TGG | + | 57542:18268-18287 | MS.gene071380:CDS | 45.0% | |
| TCCACAAAGACACGAACCAT+AGG | - | 57542:13823-13842 | MS.gene071380:intergenic | 45.0% | |
| TCCTATGGTTCGTGTCTTTG+TGG | + | 57542:13819-13838 | MS.gene071380:CDS | 45.0% | |
| TCCTGTCATGTACTAGGTCT+AGG | + | 57542:17075-17094 | MS.gene071380:intron | 45.0% | |
| TGACCGTCAGATTAGGGTTT+GGG | + | 57542:12887-12906 | MS.gene071380:CDS | 45.0% | |
| TGAGTTCCCCACTTGTAGAT+TGG | + | 57542:16128-16147 | MS.gene071380:intron | 45.0% | |
| TGCTCTATCAGTACCTTGGA+GGG | + | 57542:17465-17484 | MS.gene071380:CDS | 45.0% | |
| TGGGGTATAACTAACTGTCC+AGG | - | 57542:15009-15028 | MS.gene071380:intergenic | 45.0% | |
| ! | AAAGGAGCTTTGTACTGCAC+AGG | + | 57542:18154-18173 | MS.gene071380:CDS | 45.0% |
| ! | ACAGGTATGCTTGCTGGAAT+TGG | + | 57542:18172-18191 | MS.gene071380:intron | 45.0% |
| ! | ACTGAACCGAACTGGATTAG+TGG | + | 57542:15030-15049 | MS.gene071380:intron | 45.0% |
| ! | ATGGCGGCAATGATGATGAA+GGG | - | 57542:15953-15972 | MS.gene071380:intergenic | 45.0% |
| ! | GGTGCTGTGAAATTGTGAAG+GGG | - | 57542:15457-15476 | MS.gene071380:intergenic | 45.0% |
| ! | TGGTGCACTGATAACCTTGA+TGG | + | 57542:16935-16954 | MS.gene071380:intron | 45.0% |
| !! | GAACTGGATTAGCGGTTTGA+TGG | + | 57542:15147-15166 | MS.gene071380:intron | 45.0% |
| !! | TTTATGGTAGTGGATAGGCC+TGG | + | 57542:14783-14802 | MS.gene071380:intron | 45.0% |
| !!! | CAGTGCGTTTTGGTTCAGTT+GGG | - | 57542:14820-14839 | MS.gene071380:intergenic | 45.0% |
| !!! | TCAGTGCGTTTTGGTTCAGT+TGG | - | 57542:14821-14840 | MS.gene071380:intergenic | 45.0% |
| ACCAATCGCTTGGTTAGGTG+TGG | + | 57542:15998-16017 | MS.gene071380:intron | 50.0% | |
| ACCACACCTAACCAAGCGAT+TGG | - | 57542:16002-16021 | MS.gene071380:intergenic | 50.0% | |
| AGAATGGTGATCATCGCTGC+AGG | + | 57542:16049-16068 | MS.gene071380:intron | 50.0% | |
| AGAGAACGCAAAGGTTGGGA+TGG | + | 57542:14724-14743 | MS.gene071380:intron | 50.0% | |
| ATCATCATTGCCGCCATCGA+TGG | + | 57542:15956-15975 | MS.gene071380:intron | 50.0% | |
| CAATGACGAAGAGCCATCGA+TGG | - | 57542:15972-15991 | MS.gene071380:intergenic | 50.0% | |
| CACCCCAAACCCTAATCTGA+CGG | - | 57542:12893-12912 | MS.gene071380:intergenic | 50.0% | |
| CCCCCAATAACAGCAGAAAC+TGG | - | 57542:18326-18345 | MS.gene071380:intergenic | 50.0% | |
| GACCGTCAGATTAGGGTTTG+GGG | + | 57542:12888-12907 | MS.gene071380:CDS | 50.0% | |
| GGAAACCGCCGTAGATAGAA+TGG | + | 57542:15648-15667 | MS.gene071380:intron | 50.0% | |
| GGTTGAAGCTCCGATGACAT+TGG | - | 57542:15478-15497 | MS.gene071380:intergenic | 50.0% | |
| TACCCCAAACTGAACCGAAC+TGG | + | 57542:15022-15041 | MS.gene071380:intron | 50.0% | |
| TACTGCACAGGTATGCTTGC+TGG | + | 57542:18166-18185 | MS.gene071380:intron | 50.0% | |
| TCCCAACCTTTGCGTTCTCT+AGG | - | 57542:14724-14743 | MS.gene071380:intergenic | 50.0% | |
| ! | GATGGCGGCAATGATGATGA+AGG | - | 57542:15954-15973 | MS.gene071380:intergenic | 50.0% |
| ! | GGATTAGCGGTTTGATGGAG+CGG | + | 57542:15152-15171 | MS.gene071380:intron | 50.0% |
| ! | GGTGGAGAGCAAGGTATTCA+CGG | + | 57542:17688-17707 | MS.gene071380:intron | 50.0% |
| ! | GTGGAGAGCAAGGTATTCAC+GGG | + | 57542:17689-17708 | MS.gene071380:intron | 50.0% |
| !! | ATCAAAAGGTACCACCCCTG+TGG | + | 57542:14265-14284 | MS.gene071380:intron | 50.0% |
| ACCACCCACCCCTAATCAAG+TGG | + | 57542:15543-15562 | MS.gene071380:intron | 55.0% | |
| ACCACTTGATTAGGGGTGGG+TGG | - | 57542:15547-15566 | MS.gene071380:intergenic | 55.0% | |
| AGAGGCTGAAGGACGTAGTG+CGG | + | 57542:18088-18107 | MS.gene071380:CDS | 55.0% | |
| CAAGAGAGAGGTGGAGAGCA+AGG | + | 57542:17679-17698 | MS.gene071380:intron | 55.0% | |
| CTTGCTCTCCACCTCTCTCT+TGG | - | 57542:17681-17700 | MS.gene071380:intergenic | 55.0% | |
| GCTGCAGGTTAAAGCAACGG+CGG | + | 57542:16064-16083 | MS.gene071380:intron | 55.0% | |
| TACCTTGGAGGGCTCTTCAC+AGG | + | 57542:17476-17495 | MS.gene071380:CDS | 55.0% | |
| TGACGAAGAGCCATCGATGG+CGG | - | 57542:15969-15988 | MS.gene071380:intergenic | 55.0% | |
| TGACGATAGACCGGTCACTG+AGG | + | 57542:13699-13718 | MS.gene071380:CDS | 55.0% | |
| !! | GCTGTTATTGGGGGCATCCT+TGG | + | 57542:18332-18351 | MS.gene071380:CDS | 55.0% |
| !! | TATTGGGGGCATCCTTGGAC+AGG | + | 57542:18337-18356 | MS.gene071380:CDS | 55.0% |
| !!! | GTGGTTTTGAGAGTGAGCCG+TGG | + | 57542:16252-16271 | MS.gene071380:intron | 55.0% |
| CGGCGACGGCGAAGAGTTAA+CGG | + | 57542:12845-12864 | MS.gene071380:CDS | 60.0% | |
| CTCCTGTGAAGAGCCCTCCA+AGG | - | 57542:17481-17500 | MS.gene071380:intergenic | 60.0% | |
| GAGGCTGAAGGACGTAGTGC+GGG | + | 57542:18089-18108 | MS.gene071380:CDS | 60.0% | |
| !! | GGGGTGCCGATGCTCAAAGA+AGG | + | 57542:12907-12926 | MS.gene071380:CDS | 60.0% |
| CGGCGAAGAGTTAACGGCGC+AGG | + | 57542:12851-12870 | MS.gene071380:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57542 | gene | 12840 | 18556 | 12840 | ID=MS.gene071380 |
| 57542 | mRNA | 12840 | 18556 | 12840 | ID=MS.gene071380.t1;Parent=MS.gene071380 |
| 57542 | exon | 12840 | 12928 | 12840 | ID=MS.gene071380.t1.exon1;Parent=MS.gene071380.t1 |
| 57542 | CDS | 12840 | 12928 | 12840 | ID=cds.MS.gene071380.t1;Parent=MS.gene071380.t1 |
| 57542 | exon | 13099 | 13150 | 13099 | ID=MS.gene071380.t1.exon2;Parent=MS.gene071380.t1 |
| 57542 | CDS | 13099 | 13150 | 13099 | ID=cds.MS.gene071380.t1;Parent=MS.gene071380.t1 |
| 57542 | exon | 13652 | 13847 | 13652 | ID=MS.gene071380.t1.exon3;Parent=MS.gene071380.t1 |
| 57542 | CDS | 13652 | 13847 | 13652 | ID=cds.MS.gene071380.t1;Parent=MS.gene071380.t1 |
| 57542 | exon | 13986 | 14065 | 13986 | ID=MS.gene071380.t1.exon4;Parent=MS.gene071380.t1 |
| 57542 | CDS | 13986 | 14065 | 13986 | ID=cds.MS.gene071380.t1;Parent=MS.gene071380.t1 |
| 57542 | exon | 14156 | 14272 | 14156 | ID=MS.gene071380.t1.exon5;Parent=MS.gene071380.t1 |
| 57542 | CDS | 14156 | 14272 | 14156 | ID=cds.MS.gene071380.t1;Parent=MS.gene071380.t1 |
| 57542 | exon | 16691 | 16741 | 16691 | ID=MS.gene071380.t1.exon6;Parent=MS.gene071380.t1 |
| 57542 | CDS | 16691 | 16741 | 16691 | ID=cds.MS.gene071380.t1;Parent=MS.gene071380.t1 |
| 57542 | exon | 17463 | 17529 | 17463 | ID=MS.gene071380.t1.exon7;Parent=MS.gene071380.t1 |
| 57542 | CDS | 17463 | 17529 | 17463 | ID=cds.MS.gene071380.t1;Parent=MS.gene071380.t1 |
| 57542 | exon | 18072 | 18175 | 18072 | ID=MS.gene071380.t1.exon8;Parent=MS.gene071380.t1 |
| 57542 | CDS | 18072 | 18175 | 18072 | ID=cds.MS.gene071380.t1;Parent=MS.gene071380.t1 |
| 57542 | exon | 18254 | 18358 | 18254 | ID=MS.gene071380.t1.exon9;Parent=MS.gene071380.t1 |
| 57542 | CDS | 18254 | 18358 | 18254 | ID=cds.MS.gene071380.t1;Parent=MS.gene071380.t1 |
| 57542 | exon | 18440 | 18556 | 18440 | ID=MS.gene071380.t1.exon10;Parent=MS.gene071380.t1 |
| 57542 | CDS | 18440 | 18556 | 18440 | ID=cds.MS.gene071380.t1;Parent=MS.gene071380.t1 |
| Gene Sequence |
| Protein sequence |
