Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071746.t1 | XP_003627797.2 | 95.6 | 367 | 15 | 1 | 1 | 366 | 1 | 367 | 2.80E-198 | 701 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071746.t1 | Q8L7A4 | 65.4 | 353 | 111 | 3 | 14 | 366 | 44 | 385 | 5.0e-127 | 455.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071746.t1 | G7LFA5 | 95.6 | 367 | 15 | 1 | 1 | 366 | 1 | 367 | 2.0e-198 | 701.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47863 | MS.gene071746 | PPI |
| MS.gene03069 | MS.gene071746 | PPI |
| MS.gene003302 | MS.gene071746 | PPI |
| MS.gene27907 | MS.gene071746 | PPI |
| MS.gene058821 | MS.gene071746 | PPI |
| MS.gene023667 | MS.gene071746 | PPI |
| MS.gene74542 | MS.gene071746 | PPI |
| MS.gene058831 | MS.gene071746 | PPI |
| MS.gene02100 | MS.gene071746 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071746.t1 | MTR_8g038400 | 95.640 | 367 | 15 | 1 | 1 | 366 | 1 | 367 | 0.0 | 706 |
| MS.gene071746.t1 | MTR_3g017500 | 73.077 | 364 | 96 | 2 | 4 | 366 | 8 | 370 | 0.0 | 537 |
| MS.gene071746.t1 | MTR_3g017500 | 74.648 | 355 | 88 | 2 | 13 | 366 | 47 | 400 | 0.0 | 535 |
| MS.gene071746.t1 | MTR_8g088320 | 46.110 | 347 | 151 | 3 | 18 | 364 | 10 | 320 | 1.60e-110 | 326 |
| MS.gene071746.t1 | MTR_2g030230 | 44.957 | 347 | 153 | 3 | 18 | 364 | 19 | 327 | 1.32e-105 | 313 |
| MS.gene071746.t1 | MTR_3g067585 | 46.203 | 158 | 84 | 1 | 205 | 362 | 1 | 157 | 2.47e-39 | 137 |
| MS.gene071746.t1 | MTR_8g107340 | 40.625 | 160 | 94 | 1 | 205 | 364 | 17 | 175 | 7.48e-38 | 134 |
| MS.gene071746.t1 | MTR_2g011590 | 43.312 | 157 | 88 | 1 | 206 | 362 | 1 | 156 | 1.17e-37 | 133 |
| MS.gene071746.t1 | MTR_1g031650 | 42.581 | 155 | 87 | 2 | 209 | 362 | 6 | 159 | 2.67e-35 | 127 |
| MS.gene071746.t1 | MTR_6g069470 | 41.916 | 167 | 95 | 2 | 199 | 364 | 6 | 171 | 2.15e-33 | 122 |
| MS.gene071746.t1 | MTR_2g027100 | 43.312 | 157 | 88 | 1 | 205 | 360 | 1 | 157 | 4.95e-33 | 121 |
| MS.gene071746.t1 | MTR_4g084280 | 39.241 | 158 | 95 | 1 | 205 | 362 | 1 | 157 | 9.89e-31 | 115 |
| MS.gene071746.t1 | MTR_6g080710 | 45.161 | 124 | 63 | 3 | 11 | 130 | 9 | 131 | 3.08e-25 | 103 |
| MS.gene071746.t1 | MTR_8g464390 | 43.902 | 123 | 60 | 4 | 11 | 132 | 9 | 123 | 1.51e-24 | 104 |
| MS.gene071746.t1 | MTR_2g080950 | 43.902 | 123 | 60 | 3 | 11 | 132 | 9 | 123 | 2.26e-24 | 104 |
| MS.gene071746.t1 | MTR_1g031650 | 40.984 | 122 | 71 | 1 | 241 | 362 | 2 | 122 | 3.83e-23 | 94.0 |
| MS.gene071746.t1 | MTR_7g020860 | 37.500 | 144 | 65 | 3 | 28 | 147 | 513 | 655 | 9.90e-21 | 94.4 |
| MS.gene071746.t1 | MTR_8g100100 | 39.259 | 135 | 57 | 3 | 28 | 138 | 511 | 644 | 1.06e-20 | 94.4 |
| MS.gene071746.t1 | MTR_8g100100 | 39.259 | 135 | 57 | 3 | 28 | 138 | 505 | 638 | 1.13e-20 | 94.0 |
| MS.gene071746.t1 | MTR_1g069000 | 48.718 | 78 | 39 | 1 | 18 | 95 | 5 | 81 | 5.90e-19 | 88.2 |
| MS.gene071746.t1 | MTR_7g020860 | 53.165 | 79 | 34 | 2 | 28 | 104 | 513 | 590 | 6.44e-19 | 88.6 |
| MS.gene071746.t1 | MTR_7g099830 | 48.718 | 78 | 39 | 1 | 18 | 95 | 5 | 81 | 1.88e-18 | 86.7 |
| MS.gene071746.t1 | MTR_3g098680 | 36.923 | 130 | 57 | 3 | 27 | 132 | 507 | 635 | 1.42e-17 | 84.7 |
| MS.gene071746.t1 | MTR_8g067090 | 50.000 | 64 | 31 | 1 | 29 | 92 | 22 | 84 | 2.24e-16 | 80.1 |
| MS.gene071746.t1 | MTR_8g471120 | 50.000 | 64 | 31 | 1 | 29 | 92 | 22 | 84 | 2.24e-16 | 80.1 |
| MS.gene071746.t1 | MTR_4g074170 | 36.434 | 129 | 58 | 4 | 20 | 125 | 481 | 608 | 4.60e-16 | 80.1 |
| MS.gene071746.t1 | MTR_8g067080 | 45.714 | 70 | 37 | 1 | 23 | 92 | 16 | 84 | 2.07e-15 | 77.4 |
| MS.gene071746.t1 | MTR_8g067080 | 45.714 | 70 | 37 | 1 | 23 | 92 | 16 | 84 | 2.11e-15 | 77.4 |
| MS.gene071746.t1 | MTR_8g471110 | 45.714 | 70 | 37 | 1 | 23 | 92 | 16 | 84 | 2.11e-15 | 77.4 |
| MS.gene071746.t1 | MTR_1g008950 | 36.264 | 91 | 56 | 2 | 210 | 298 | 4 | 94 | 1.18e-11 | 62.0 |
| MS.gene071746.t1 | MTR_8g464390 | 43.750 | 80 | 37 | 3 | 53 | 132 | 1 | 72 | 1.47e-11 | 65.9 |
| MS.gene071746.t1 | MTR_2g080950 | 43.750 | 80 | 37 | 2 | 53 | 132 | 1 | 72 | 2.74e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071746.t1 | AT3G07940 | 65.439 | 353 | 111 | 3 | 14 | 366 | 44 | 385 | 8.72e-168 | 474 |
| MS.gene071746.t1 | AT4G21160 | 44.475 | 362 | 174 | 4 | 5 | 366 | 3 | 337 | 9.55e-112 | 329 |
| MS.gene071746.t1 | AT4G21160 | 44.475 | 362 | 174 | 4 | 5 | 366 | 3 | 337 | 9.55e-112 | 329 |
| MS.gene071746.t1 | AT4G21160 | 44.475 | 362 | 174 | 4 | 5 | 366 | 3 | 337 | 9.55e-112 | 329 |
| MS.gene071746.t1 | AT4G21160 | 44.475 | 362 | 174 | 4 | 5 | 366 | 3 | 337 | 9.55e-112 | 329 |
| MS.gene071746.t1 | AT4G05330 | 45.000 | 360 | 170 | 4 | 7 | 366 | 5 | 336 | 3.11e-110 | 325 |
| MS.gene071746.t1 | AT4G05330 | 45.000 | 360 | 170 | 4 | 7 | 366 | 5 | 336 | 3.11e-110 | 325 |
| MS.gene071746.t1 | AT4G05330 | 45.820 | 323 | 147 | 4 | 44 | 366 | 7 | 301 | 5.14e-97 | 291 |
| MS.gene071746.t1 | AT3G07940 | 58.744 | 223 | 81 | 3 | 19 | 241 | 49 | 260 | 2.31e-89 | 270 |
| MS.gene071746.t1 | AT1G70790 | 44.444 | 153 | 84 | 1 | 209 | 360 | 6 | 158 | 6.16e-38 | 135 |
| MS.gene071746.t1 | AT1G70790 | 44.444 | 153 | 84 | 1 | 209 | 360 | 6 | 158 | 6.16e-38 | 135 |
| MS.gene071746.t1 | AT1G70790 | 44.444 | 153 | 84 | 1 | 209 | 360 | 6 | 158 | 6.16e-38 | 135 |
| MS.gene071746.t1 | AT1G70800 | 41.463 | 164 | 95 | 1 | 197 | 360 | 2 | 164 | 1.22e-37 | 134 |
| MS.gene071746.t1 | AT1G73580 | 41.875 | 160 | 92 | 1 | 205 | 364 | 4 | 162 | 5.23e-37 | 132 |
| MS.gene071746.t1 | AT1G66360 | 43.125 | 160 | 88 | 2 | 205 | 362 | 1 | 159 | 1.10e-35 | 128 |
| MS.gene071746.t1 | AT1G70810 | 40.506 | 158 | 93 | 1 | 205 | 362 | 1 | 157 | 3.20e-35 | 127 |
| MS.gene071746.t1 | AT5G37740 | 40.373 | 161 | 92 | 2 | 205 | 362 | 1 | 160 | 1.06e-32 | 120 |
| MS.gene071746.t1 | AT2G01540 | 40.523 | 153 | 90 | 1 | 209 | 360 | 6 | 158 | 1.26e-32 | 120 |
| MS.gene071746.t1 | AT3G17980 | 35.882 | 170 | 106 | 2 | 195 | 364 | 5 | 171 | 3.03e-32 | 119 |
| MS.gene071746.t1 | AT5G47710 | 39.623 | 159 | 95 | 1 | 205 | 362 | 1 | 159 | 3.76e-32 | 119 |
| MS.gene071746.t1 | AT5G47710 | 39.623 | 159 | 95 | 1 | 205 | 362 | 1 | 159 | 3.76e-32 | 119 |
| MS.gene071746.t1 | AT5G47710 | 39.623 | 159 | 95 | 1 | 205 | 362 | 1 | 159 | 3.76e-32 | 119 |
| MS.gene071746.t1 | AT5G47710 | 39.623 | 159 | 95 | 1 | 205 | 362 | 1 | 159 | 3.76e-32 | 119 |
| MS.gene071746.t1 | AT1G48590 | 39.429 | 175 | 99 | 4 | 192 | 364 | 26 | 195 | 6.98e-32 | 119 |
| MS.gene071746.t1 | AT1G48590 | 40.123 | 162 | 92 | 3 | 205 | 364 | 6 | 164 | 1.17e-31 | 117 |
| MS.gene071746.t1 | AT1G48590 | 40.123 | 162 | 92 | 3 | 205 | 364 | 6 | 164 | 1.17e-31 | 117 |
| MS.gene071746.t1 | AT1G23140 | 37.342 | 158 | 98 | 1 | 205 | 362 | 1 | 157 | 2.07e-30 | 114 |
| MS.gene071746.t1 | AT5G37740 | 38.012 | 171 | 92 | 3 | 205 | 362 | 1 | 170 | 9.13e-30 | 113 |
| MS.gene071746.t1 | AT5G54310 | 42.857 | 140 | 71 | 4 | 11 | 149 | 9 | 140 | 1.59e-26 | 110 |
| MS.gene071746.t1 | AT3G17660 | 41.463 | 123 | 63 | 3 | 11 | 132 | 9 | 123 | 1.65e-24 | 99.4 |
| MS.gene071746.t1 | AT3G17660 | 41.463 | 123 | 63 | 3 | 11 | 132 | 9 | 123 | 3.35e-24 | 99.8 |
| MS.gene071746.t1 | AT3G17660 | 41.463 | 123 | 63 | 3 | 11 | 132 | 9 | 123 | 6.55e-24 | 99.4 |
| MS.gene071746.t1 | AT1G70790 | 42.857 | 119 | 67 | 1 | 243 | 360 | 3 | 121 | 1.20e-23 | 95.9 |
| MS.gene071746.t1 | AT1G10870 | 27.304 | 293 | 172 | 9 | 28 | 281 | 478 | 768 | 2.53e-19 | 90.1 |
| MS.gene071746.t1 | AT5G13300 | 40.310 | 129 | 55 | 3 | 28 | 135 | 512 | 639 | 2.66e-19 | 90.1 |
| MS.gene071746.t1 | AT5G61980 | 49.462 | 93 | 44 | 2 | 12 | 102 | 493 | 584 | 3.66e-19 | 89.7 |
| MS.gene071746.t1 | AT1G10870 | 26.846 | 298 | 172 | 9 | 28 | 281 | 478 | 773 | 1.08e-18 | 88.2 |
| MS.gene071746.t1 | AT3G53710 | 46.835 | 79 | 41 | 1 | 18 | 96 | 5 | 82 | 1.75e-17 | 84.0 |
| MS.gene071746.t1 | AT3G53710 | 46.835 | 79 | 41 | 1 | 18 | 96 | 5 | 82 | 1.75e-17 | 84.0 |
| MS.gene071746.t1 | AT3G53710 | 46.835 | 79 | 41 | 1 | 18 | 96 | 5 | 82 | 1.75e-17 | 84.0 |
| MS.gene071746.t1 | AT3G17660 | 36.585 | 123 | 59 | 3 | 11 | 132 | 9 | 113 | 2.81e-17 | 80.5 |
| MS.gene071746.t1 | AT2G37550 | 46.154 | 78 | 41 | 1 | 18 | 95 | 5 | 81 | 2.93e-17 | 83.2 |
| MS.gene071746.t1 | AT2G37550 | 46.154 | 78 | 41 | 1 | 18 | 95 | 5 | 81 | 2.93e-17 | 83.2 |
| MS.gene071746.t1 | AT1G48590 | 29.480 | 173 | 87 | 3 | 192 | 364 | 26 | 163 | 5.82e-17 | 78.2 |
| MS.gene071746.t1 | AT1G60860 | 38.462 | 117 | 55 | 3 | 28 | 128 | 307 | 422 | 1.25e-16 | 81.6 |
| MS.gene071746.t1 | AT1G60860 | 38.462 | 117 | 55 | 3 | 28 | 128 | 367 | 482 | 1.48e-16 | 81.6 |
| MS.gene071746.t1 | AT1G60860 | 38.462 | 117 | 55 | 3 | 28 | 128 | 478 | 593 | 1.51e-16 | 81.6 |
| MS.gene071746.t1 | AT2G35210 | 47.826 | 69 | 35 | 1 | 23 | 91 | 16 | 83 | 8.10e-16 | 78.6 |
| MS.gene071746.t1 | AT2G35210 | 47.826 | 69 | 35 | 1 | 23 | 91 | 16 | 83 | 1.66e-15 | 77.8 |
| MS.gene071746.t1 | AT5G46750 | 47.826 | 69 | 35 | 1 | 23 | 91 | 16 | 83 | 1.73e-15 | 77.8 |
| MS.gene071746.t1 | AT4G17890 | 46.377 | 69 | 36 | 1 | 23 | 91 | 19 | 86 | 6.81e-15 | 75.9 |
| MS.gene071746.t1 | AT4G17890 | 46.377 | 69 | 36 | 1 | 23 | 91 | 19 | 86 | 9.04e-15 | 75.5 |
Find 67 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCGAACTTACCACTTTA+AGG | 0.091974 | 8.1:+65437658 | None:intergenic |
| CCCTTATGTCATCCTTTCTT+TGG | 0.175750 | 8.1:-65437871 | MS.gene071746:CDS |
| ACCAACACTTACACCCATTT+TGG | 0.208803 | 8.1:+65439529 | None:intergenic |
| TATCCAAGCTATTGAATTAG+AGG | 0.240207 | 8.1:+65436586 | None:intergenic |
| TGAATTTGTTGGGTTGATTA+AGG | 0.275476 | 8.1:-65437946 | MS.gene071746:CDS |
| TCGATTGAGGTATGTGGTTT+TGG | 0.276970 | 8.1:+65438537 | None:intergenic |
| GCGGAACTCCAGAGCCAAAA+TGG | 0.294574 | 8.1:-65439543 | MS.gene071746:CDS |
| CCTTATGTCATCCTTTCTTT+GGG | 0.326292 | 8.1:-65437870 | MS.gene071746:CDS |
| TTTATTTGCATCAAGTGTTC+TGG | 0.328020 | 8.1:-65439341 | MS.gene071746:CDS |
| GGAACAATTTGAATCCAGTT+TGG | 0.337343 | 8.1:-65437722 | MS.gene071746:CDS |
| TCTGGCATACATAGAAGTTT+AGG | 0.375842 | 8.1:-65439323 | MS.gene071746:CDS |
| AATCGAACTTACCACTTTAA+GGG | 0.376433 | 8.1:+65437659 | None:intergenic |
| GCAGGTATGGTTGAATTTGT+TGG | 0.389459 | 8.1:-65437957 | MS.gene071746:CDS |
| TGATGCATCAAGCTGGAAAC+AGG | 0.392763 | 8.1:-65439579 | MS.gene071746:CDS |
| AAAATCAGATCTTCAAGTCT+TGG | 0.398805 | 8.1:-65439368 | MS.gene071746:intron |
| CAGGTATGGTTGAATTTGTT+GGG | 0.410672 | 8.1:-65437956 | MS.gene071746:CDS |
| AAGAGCGCTCTGAATATATC+AGG | 0.411157 | 8.1:-65438515 | MS.gene071746:intron |
| AGTTGATGCATTAGAGAAGT+TGG | 0.412436 | 8.1:-65438619 | MS.gene071746:CDS |
| TTAAGGGGAGGAATGTTCTC+TGG | 0.431886 | 8.1:+65437675 | None:intergenic |
| CCTGGTATGAAAGATGTATC+AGG | 0.434654 | 8.1:-65440031 | MS.gene071746:intron |
| CAAGGAAGAAGTGTATCATT+AGG | 0.434906 | 8.1:-65438334 | MS.gene071746:CDS |
| ATTAGACTTTCATTCCAAAC+TGG | 0.450148 | 8.1:+65437708 | None:intergenic |
| CTTCCTTGAGATGGTACAAA+TGG | 0.455222 | 8.1:+65438349 | None:intergenic |
| TGGCTCTGGAGTTCCGCAAT+CGG | 0.472934 | 8.1:+65439549 | None:intergenic |
| CCCAAAGAAAGGATGACATA+AGG | 0.480442 | 8.1:+65437870 | None:intergenic |
| TTTACTGTTATAGGCAGGTA+TGG | 0.481028 | 8.1:-65437970 | MS.gene071746:intron |
| CGCTCTTCGATTGAGGTATG+TGG | 0.485418 | 8.1:+65438531 | None:intergenic |
| TTCAGAGCGCTCTTCGATTG+AGG | 0.487339 | 8.1:+65438524 | None:intergenic |
| CGAGGAACTGCAGTTTATGA+TGG | 0.487985 | 8.1:-65438395 | MS.gene071746:CDS |
| AGCTTCACCCATAAAATCAT+CGG | 0.500073 | 8.1:+65436825 | None:intergenic |
| TCAAATTTGATGCATCAAGC+TGG | 0.501569 | 8.1:-65439586 | MS.gene071746:CDS |
| TTCAAAGAAGAGTACCTCAT+TGG | 0.502303 | 8.1:-65438188 | MS.gene071746:intron |
| TCACTTGGTGTCCCAAAGAA+AGG | 0.502315 | 8.1:+65437859 | None:intergenic |
| GTTGATGCATTAGAGAAGTT+GGG | 0.502430 | 8.1:-65438618 | MS.gene071746:CDS |
| CCAAAGAAAGGATGACATAA+GGG | 0.504098 | 8.1:+65437871 | None:intergenic |
| AATTATTAGGTACACACAAA+AGG | 0.506680 | 8.1:-65439612 | MS.gene071746:intron |
| CGGAACTCCAGAGCCAAAAT+GGG | 0.516197 | 8.1:-65439542 | MS.gene071746:CDS |
| ATTAAGGTTAAAGTTATGAA+AGG | 0.516242 | 8.1:-65437930 | MS.gene071746:CDS |
| CTCGAGCTGCATGGACTCGT+TGG | 0.525843 | 8.1:+65436747 | None:intergenic |
| TATGCAGCTAGTGTATGATA+AGG | 0.533070 | 8.1:-65436860 | MS.gene071746:intron |
| TCCTCAAGGCATGAAAGTCC+TGG | 0.540402 | 8.1:-65440049 | MS.gene071746:CDS |
| CATCATTGAAGCTAGATCAA+TGG | 0.540544 | 8.1:-65438653 | MS.gene071746:CDS |
| GAACATTCCTCCCCTTAAAG+TGG | 0.545423 | 8.1:-65437670 | MS.gene071746:intron |
| AAGGATGACATAAGGGTCAC+TGG | 0.548413 | 8.1:+65437878 | None:intergenic |
| GTGTCATATCTCTTGATGAC+GGG | 0.550663 | 8.1:-65436684 | MS.gene071746:CDS |
| AGTAACATACCTTTGATATG+TGG | 0.551071 | 8.1:+65439297 | None:intergenic |
| CCTGATACATCTTTCATACC+AGG | 0.553792 | 8.1:+65440031 | None:intergenic |
| TCACTACATCTCTAATTGCT+AGG | 0.565921 | 8.1:+65437901 | None:intergenic |
| GCGCTGACAAGACATCATAT+CGG | 0.569887 | 8.1:-65438259 | MS.gene071746:CDS |
| ATCGAACTTACCACTTTAAG+GGG | 0.570980 | 8.1:+65437660 | None:intergenic |
| TACAAATTTCTCGAGCTGCA+TGG | 0.578821 | 8.1:+65436738 | None:intergenic |
| CGAGAAATTTGTAGCAAGCA+AGG | 0.579213 | 8.1:-65436728 | MS.gene071746:CDS |
| TGTCCATTTGTACCATCTCA+AGG | 0.588611 | 8.1:-65438352 | MS.gene071746:CDS |
| GATACACTTCTTCCTTGAGA+TGG | 0.597028 | 8.1:+65438340 | None:intergenic |
| TAAATGAAACATTACCAATG+AGG | 0.599438 | 8.1:+65438174 | None:intergenic |
| GACATGCATTCCGAAAGAGC+TGG | 0.610586 | 8.1:-65438237 | MS.gene071746:CDS |
| AAAGGCTAGAAATGTCCTCA+AGG | 0.614230 | 8.1:-65440063 | None:intergenic |
| TTTAGGAGTCCACATATCAA+AGG | 0.615847 | 8.1:-65439306 | MS.gene071746:intron |
| GACAACAGTCTTGTTAGAGA+TGG | 0.617464 | 8.1:-65436706 | MS.gene071746:CDS |
| GAACTTACCACTTTAAGGGG+AGG | 0.620270 | 8.1:+65437663 | None:intergenic |
| ACCAGGACTTTCATGCCTTG+AGG | 0.620692 | 8.1:+65440048 | None:intergenic |
| AATTGCATACGAGAAATCTA+CGG | 0.625889 | 8.1:-65436770 | MS.gene071746:CDS |
| GCAATTGCAGCTAAAACTAG+TGG | 0.635267 | 8.1:+65436787 | None:intergenic |
| GATGCATTAGAGAAGTTGGG+TGG | 0.652196 | 8.1:-65438615 | MS.gene071746:CDS |
| GGTGTCATATCTCTTGATGA+CGG | 0.662024 | 8.1:-65436685 | MS.gene071746:CDS |
| AGACTACAGAATGTTGAGAG+AGG | 0.662594 | 8.1:-65436637 | MS.gene071746:CDS |
| TAAGTGTAACATGAACTACT+CGG | 0.721246 | 8.1:+65438310 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAATATAAAGACT+TGG | + | chr8.1:65439106-65439125 | None:intergenic | 10.0% |
| !! | AAAAGTAAAAACTTATATCT+TGG | - | chr8.1:65436960-65436979 | MS.gene071746:intron | 15.0% |
| !! | ATAAAAGAATATATTCCATT+AGG | + | chr8.1:65438596-65438615 | None:intergenic | 15.0% |
| !! | ATTAATCATTCTATTATTCT+GGG | + | chr8.1:65436666-65436685 | None:intergenic | 15.0% |
| !! | GTACCTAATAATTTATAAAA+AGG | + | chr8.1:65437027-65437046 | None:intergenic | 15.0% |
| !! | TATAATGAAAAATTTAGTAG+AGG | - | chr8.1:65436795-65436814 | MS.gene071746:CDS | 15.0% |
| !! | TTATCCAATTCTTAAAAATT+GGG | - | chr8.1:65439260-65439279 | MS.gene071746:intron | 15.0% |
| !!! | AAATTCTTAACATCTTTTTA+GGG | - | chr8.1:65437654-65437673 | MS.gene071746:intron | 15.0% |
| !!! | AAGCCTTTTTATAAATTATT+AGG | - | chr8.1:65437021-65437040 | MS.gene071746:intron | 15.0% |
| !!! | TCTTATTTAAACTTTTTTAC+TGG | - | chr8.1:65437689-65437708 | MS.gene071746:CDS | 15.0% |
| !!! | TTTGGTTTTTTTATATTACT+TGG | + | chr8.1:65438094-65438113 | None:intergenic | 15.0% |
| !! | AATTTATAAAAAGGCTTATG+TGG | + | chr8.1:65437018-65437037 | None:intergenic | 20.0% |
| !! | ATAATATGAACTACACATAA+AGG | + | chr8.1:65439582-65439601 | None:intergenic | 20.0% |
| !! | ATCCAAAATAGAAATCAATA+TGG | - | chr8.1:65439050-65439069 | MS.gene071746:intron | 20.0% |
| !! | ATGAACTAATAATGATATAG+AGG | + | chr8.1:65437219-65437238 | None:intergenic | 20.0% |
| !! | ATTAAGGTTAAAGTTATGAA+AGG | - | chr8.1:65438716-65438735 | MS.gene071746:intron | 20.0% |
| !! | CAATGTCATAAATTAAACTT+TGG | - | chr8.1:65437593-65437612 | MS.gene071746:intron | 20.0% |
| !! | CTTATCCAATTCTTAAAAAT+TGG | - | chr8.1:65439259-65439278 | MS.gene071746:intron | 20.0% |
| !! | GAAAAATATGAATAAAGTAG+AGG | - | chr8.1:65438833-65438852 | MS.gene071746:intron | 20.0% |
| !! | GATTAATCATTCTATTATTC+TGG | + | chr8.1:65436667-65436686 | None:intergenic | 20.0% |
| !! | TAATTTATTATCCTCTTGAA+AGG | - | chr8.1:65436984-65437003 | MS.gene071746:intron | 20.0% |
| !! | TTAATCATTCTATTATTCTG+GGG | + | chr8.1:65436665-65436684 | None:intergenic | 20.0% |
| !! | TTGTTACTATTTACTGTTAT+AGG | - | chr8.1:65438667-65438686 | MS.gene071746:intron | 20.0% |
| !!! | AGTATTTTTTTCACAAAAAC+AGG | + | chr8.1:65436754-65436773 | None:intergenic | 20.0% |
| !!! | CAAATTCTTAACATCTTTTT+AGG | - | chr8.1:65437653-65437672 | MS.gene071746:intron | 20.0% |
| !!! | CAATTTTTAAGAATTGGATA+AGG | + | chr8.1:65439261-65439280 | None:intergenic | 20.0% |
| !!! | TTGCTTCATACTTTTTTAAA+TGG | - | chr8.1:65439726-65439745 | MS.gene071746:intron | 20.0% |
| !!! | TTTTTTCCTGAAAAATCATT+AGG | + | chr8.1:65438229-65438248 | None:intergenic | 20.0% |
| ! | AAACTCTATCAACTATATGT+TGG | + | chr8.1:65439349-65439368 | None:intergenic | 25.0% |
| ! | AACTCTATCAACTATATGTT+GGG | + | chr8.1:65439348-65439367 | None:intergenic | 25.0% |
| ! | AATTAGTAAGAAGAAACATC+TGG | + | chr8.1:65439622-65439641 | None:intergenic | 25.0% |
| ! | AATTATTAGGTACACACAAA+AGG | - | chr8.1:65437034-65437053 | MS.gene071746:intron | 25.0% |
| ! | ACTAATAATGATATAGAGGT+TGG | + | chr8.1:65437215-65437234 | None:intergenic | 25.0% |
| ! | AGGACATTTCTTAATAACAA+TGG | + | chr8.1:65438209-65438228 | None:intergenic | 25.0% |
| ! | TAAAGTAGAGGAAATGAAAA+AGG | - | chr8.1:65438845-65438864 | MS.gene071746:intron | 25.0% |
| ! | TAAATGAAACATTACCAATG+AGG | + | chr8.1:65438475-65438494 | None:intergenic | 25.0% |
| ! | TAACACTTATGTCCAAATAT+CGG | - | chr8.1:65439490-65439509 | MS.gene071746:intron | 25.0% |
| ! | TAAGTGTTAAAATCTCACAT+CGG | + | chr8.1:65439479-65439498 | None:intergenic | 25.0% |
| ! | TAATCATTCTATTATTCTGG+GGG | + | chr8.1:65436664-65436683 | None:intergenic | 25.0% |
| ! | TCATTGACAGTAATTTAAGA+TGG | + | chr8.1:65437565-65437584 | None:intergenic | 25.0% |
| ! | TGTGTAGTTCATATTATAGA+AGG | - | chr8.1:65439585-65439604 | MS.gene071746:CDS | 25.0% |
| ! | TTAAGAATTGGATAAGGATT+GGG | + | chr8.1:65439255-65439274 | None:intergenic | 25.0% |
| ! | TTAATATTTGTTCTTGCAGT+CGG | - | chr8.1:65438883-65438902 | MS.gene071746:intron | 25.0% |
| ! | TTTAAGAATTGGATAAGGAT+TGG | + | chr8.1:65439256-65439275 | None:intergenic | 25.0% |
| !! | AAATGTCCTAATGATTTTTC+AGG | - | chr8.1:65438220-65438239 | MS.gene071746:CDS | 25.0% |
| !! | ATTTTCAACCGATGATTTTA+TGG | - | chr8.1:65439813-65439832 | MS.gene071746:intron | 25.0% |
| !! | TTCTATTTGTATGTTTTGTG+CGG | - | chr8.1:65438173-65438192 | MS.gene071746:intron | 25.0% |
| !! | TTGCATCAATTGATTCAAAA+AGG | + | chr8.1:65438545-65438564 | None:intergenic | 25.0% |
| !! | TTTTCAACCGATGATTTTAT+GGG | - | chr8.1:65439814-65439833 | MS.gene071746:intron | 25.0% |
| !!! | ATTTTTCAGGAAAAAATACG+AGG | - | chr8.1:65438233-65438252 | MS.gene071746:CDS | 25.0% |
| !!! | CTTCATACTTTTTTAAATGG+CGG | - | chr8.1:65439729-65439748 | MS.gene071746:intron | 25.0% |
| !!! | TGCCATATTGATTTCTATTT+TGG | + | chr8.1:65439055-65439074 | None:intergenic | 25.0% |
| !!! | TTAAGTACTGATTTTGATCA+AGG | + | chr8.1:65437931-65437950 | None:intergenic | 25.0% |
| AAAATCAGATCTTCAAGTCT+TGG | - | chr8.1:65437278-65437297 | MS.gene071746:intron | 30.0% | |
| AAAATGATCTCCGAATCTAT+TGG | - | chr8.1:65436917-65436936 | MS.gene071746:intron | 30.0% | |
| AAGAGATAAGAATACTCACT+TGG | + | chr8.1:65438805-65438824 | None:intergenic | 30.0% | |
| AAGTTCGATTCAACGAAAAT+CGG | + | chr8.1:65437143-65437162 | None:intergenic | 30.0% | |
| AATCATTCTATTATTCTGGG+GGG | + | chr8.1:65436663-65436682 | None:intergenic | 30.0% | |
| AATCGAACTTACCACTTTAA+GGG | + | chr8.1:65438990-65439009 | None:intergenic | 30.0% | |
| AATTGCATACGAGAAATCTA+CGG | - | chr8.1:65439876-65439895 | MS.gene071746:intron | 30.0% | |
| ACCATCTTAGAATTTGTGTA+GGG | - | chr8.1:65439372-65439391 | MS.gene071746:intron | 30.0% | |
| ACTGAAAATGAGTTTAGAAG+TGG | + | chr8.1:65439445-65439464 | None:intergenic | 30.0% | |
| AGTAACATACCTTTGATATG+TGG | + | chr8.1:65437352-65437371 | None:intergenic | 30.0% | |
| ATCTGTAATAGTCAAACATG+TGG | + | chr8.1:65437971-65437990 | None:intergenic | 30.0% | |
| ATTAGACTTTCATTCCAAAC+TGG | + | chr8.1:65438941-65438960 | None:intergenic | 30.0% | |
| TAAGTGTAACATGAACTACT+CGG | + | chr8.1:65438339-65438358 | None:intergenic | 30.0% | |
| TACCATCTTAGAATTTGTGT+AGG | - | chr8.1:65439371-65439390 | MS.gene071746:intron | 30.0% | |
| TACTATTTACTGTTATAGGC+AGG | - | chr8.1:65438671-65438690 | MS.gene071746:intron | 30.0% | |
| TAGTATTATGCATGACCTAA+TGG | - | chr8.1:65438578-65438597 | MS.gene071746:CDS | 30.0% | |
| TTTATTTGCATCAAGTGTTC+TGG | - | chr8.1:65437305-65437324 | MS.gene071746:intron | 30.0% | |
| ! | AATCCAAAACAAAAGAGCAT+TGG | + | chr8.1:65439149-65439168 | None:intergenic | 30.0% |
| ! | AGCATTGGAAATGAAAAGAA+GGG | + | chr8.1:65439134-65439153 | None:intergenic | 30.0% |
| ! | TTTTCACAAAAACAGGTGAA+AGG | + | chr8.1:65436747-65436766 | None:intergenic | 30.0% |
| !! | GCAACCCAATTTTTAAGAAT+TGG | + | chr8.1:65439267-65439286 | None:intergenic | 30.0% |
| !! | TGAATTTGTTGGGTTGATTA+AGG | - | chr8.1:65438700-65438719 | MS.gene071746:intron | 30.0% |
| !! | TTTCCAATGCTCTTTTGTTT+TGG | - | chr8.1:65439143-65439162 | MS.gene071746:intron | 30.0% |
| !!! | ACATCTTTTTAGGGTTTGTT+TGG | - | chr8.1:65437663-65437682 | MS.gene071746:intron | 30.0% |
| !!! | ATGCTCTTTTGTTTTGGATT+TGG | - | chr8.1:65439149-65439168 | MS.gene071746:intron | 30.0% |
| !!! | ATTTTGATCAAGGTACTGTT+TGG | + | chr8.1:65437921-65437940 | None:intergenic | 30.0% |
| !!! | ATTTTTTTCTCCGGATCTAA+AGG | + | chr8.1:65436902-65436921 | None:intergenic | 30.0% |
| !!! | TTTTACTTTTTAGAGCAGCA+CGG | + | chr8.1:65436950-65436969 | None:intergenic | 30.0% |
| AAGGAGTAAAGAGGAAAGAA+AGG | + | chr8.1:65439563-65439582 | None:intergenic | 35.0% | |
| ACCAATATCTCATGTGATGT+CGG | + | chr8.1:65437451-65437470 | None:intergenic | 35.0% | |
| AGCTTCACCCATAAAATCAT+CGG | + | chr8.1:65439824-65439843 | None:intergenic | 35.0% | |
| ATCAACGATGACATGAATGA+AGG | + | chr8.1:65439179-65439198 | None:intergenic | 35.0% | |
| ATCGAACTTACCACTTTAAG+GGG | + | chr8.1:65438989-65439008 | None:intergenic | 35.0% | |
| CAAAAACAGGTGAAAGGAAA+AGG | + | chr8.1:65436741-65436760 | None:intergenic | 35.0% | |
| CAATCGAACTTACCACTTTA+AGG | + | chr8.1:65438991-65439010 | None:intergenic | 35.0% | |
| CATCATTGAAGCTAGATCAA+TGG | - | chr8.1:65437993-65438012 | MS.gene071746:intron | 35.0% | |
| CCAAAGAAAGGATGACATAA+GGG | + | chr8.1:65438778-65438797 | None:intergenic | 35.0% | |
| CCTTATGTCATCCTTTCTTT+GGG | - | chr8.1:65438776-65438795 | MS.gene071746:intron | 35.0% | |
| CTACACATAAAGGAGTAAAG+AGG | + | chr8.1:65439572-65439591 | None:intergenic | 35.0% | |
| GGAACAATTTGAATCCAGTT+TGG | - | chr8.1:65438924-65438943 | MS.gene071746:intron | 35.0% | |
| GTGATGTACAATGTAGTGTA+TGG | - | chr8.1:65436845-65436864 | MS.gene071746:CDS | 35.0% | |
| GTTGATGCATTAGAGAAGTT+GGG | - | chr8.1:65438028-65438047 | MS.gene071746:intron | 35.0% | |
| TATGCAGCTAGTGTATGATA+AGG | - | chr8.1:65439786-65439805 | MS.gene071746:intron | 35.0% | |
| TCAAAGGAATTCCATGTAGA+AGG | - | chr8.1:65437530-65437549 | MS.gene071746:intron | 35.0% | |
| TCAAATTTGATGCATCAAGC+TGG | - | chr8.1:65437060-65437079 | MS.gene071746:intron | 35.0% | |
| TCACTACATCTCTAATTGCT+AGG | + | chr8.1:65438748-65438767 | None:intergenic | 35.0% | |
| TCTGGCATACATAGAAGTTT+AGG | - | chr8.1:65437323-65437342 | MS.gene071746:intron | 35.0% | |
| TGGTTAAGTTTCCTTTCAAG+AGG | + | chr8.1:65436998-65437017 | None:intergenic | 35.0% | |
| TTATCATACACTAGCTGCAT+AGG | + | chr8.1:65439787-65439806 | None:intergenic | 35.0% | |
| TTCAGATCTCTAGTACTCAA+AGG | - | chr8.1:65437514-65437533 | MS.gene071746:intron | 35.0% | |
| TTTACTGTTATAGGCAGGTA+TGG | - | chr8.1:65438676-65438695 | MS.gene071746:intron | 35.0% | |
| TTTAGGAGTCCACATATCAA+AGG | - | chr8.1:65437340-65437359 | MS.gene071746:intron | 35.0% | |
| ! | AAAACTGGCTCATAAGGTAA+GGG | - | chr8.1:65439412-65439431 | MS.gene071746:intron | 35.0% |
| ! | ACCCTACACAAATTCTAAGA+TGG | + | chr8.1:65439376-65439395 | None:intergenic | 35.0% |
| ! | AGTTGATGCATTAGAGAAGT+TGG | - | chr8.1:65438027-65438046 | MS.gene071746:intron | 35.0% |
| ! | CAAGGAAGAAGTGTATCATT+AGG | - | chr8.1:65438312-65438331 | MS.gene071746:CDS | 35.0% |
| ! | CAGGTATGGTTGAATTTGTT+GGG | - | chr8.1:65438690-65438709 | MS.gene071746:intron | 35.0% |
| ! | TATTTGTATGTTTTGTGCGG+AGG | - | chr8.1:65438176-65438195 | MS.gene071746:intron | 35.0% |
| ! | TTCGTTGAATCGAACTTGTT+AGG | - | chr8.1:65437146-65437165 | MS.gene071746:intron | 35.0% |
| !! | CTATTTTGGATCTCTTGACA+CGG | + | chr8.1:65439041-65439060 | None:intergenic | 35.0% |
| !! | CTTATGAGCCAGTTTTGTAA+GGG | + | chr8.1:65439408-65439427 | None:intergenic | 35.0% |
| !! | CTTATTTTCACAAGTCCTCT+AGG | - | chr8.1:65437747-65437766 | MS.gene071746:CDS | 35.0% |
| !! | GAGCATTGGAAATGAAAAGA+AGG | + | chr8.1:65439135-65439154 | None:intergenic | 35.0% |
| !! | TTCAAAGAAGAGTACCTCAT+TGG | - | chr8.1:65438458-65438477 | MS.gene071746:intron | 35.0% |
| !!! | TCGGAGATCATTTTTTTCTC+CGG | + | chr8.1:65436911-65436930 | None:intergenic | 35.0% |
| AAGAGGAAAGAAAGGAATCG+AGG | + | chr8.1:65439555-65439574 | None:intergenic | 40.0% | |
| AGACTACAGAATGTTGAGAG+AGG | - | chr8.1:65440009-65440028 | MS.gene071746:intron | 40.0% | |
| CATTCATGTCATCGTTGATC+TGG | - | chr8.1:65439180-65439199 | MS.gene071746:intron | 40.0% | |
| CCCAAAGAAAGGATGACATA+AGG | + | chr8.1:65438779-65438798 | None:intergenic | 40.0% | |
| CCCTTATGTCATCCTTTCTT+TGG | - | chr8.1:65438775-65438794 | MS.gene071746:intron | 40.0% | |
| CCTGATACATCTTTCATACC+AGG | + | chr8.1:65436618-65436637 | None:intergenic | 40.0% | |
| CCTGGTATGAAAGATGTATC+AGG | - | chr8.1:65436615-65436634 | MS.gene071746:CDS | 40.0% | |
| CGAGAAATTTGTAGCAAGCA+AGG | - | chr8.1:65439918-65439937 | MS.gene071746:intron | 40.0% | |
| CGGTAAAAACACGCGTTATA+AGG | - | chr8.1:65438903-65438922 | MS.gene071746:intron | 40.0% | |
| CTTCCTTGAGATGGTACAAA+TGG | + | chr8.1:65438300-65438319 | None:intergenic | 40.0% | |
| GATACACTTCTTCCTTGAGA+TGG | + | chr8.1:65438309-65438328 | None:intergenic | 40.0% | |
| GCAATTGCAGCTAAAACTAG+TGG | + | chr8.1:65439862-65439881 | None:intergenic | 40.0% | |
| GCAGGTATGGTTGAATTTGT+TGG | - | chr8.1:65438689-65438708 | MS.gene071746:intron | 40.0% | |
| GTTACCTAGTTGAGCAAGTT+TGG | + | chr8.1:65436822-65436841 | None:intergenic | 40.0% | |
| TAACACGACCCTTACAAAAC+TGG | - | chr8.1:65439397-65439416 | MS.gene071746:intron | 40.0% | |
| TACAAATTTCTCGAGCTGCA+TGG | + | chr8.1:65439911-65439930 | None:intergenic | 40.0% | |
| TCCGACATCACATGAGATAT+TGG | - | chr8.1:65437447-65437466 | MS.gene071746:intron | 40.0% | |
| TGACGCTGTAATCCGATATT+TGG | + | chr8.1:65439505-65439524 | None:intergenic | 40.0% | |
| TGCTGTAAAGCCTTTAGATC+CGG | - | chr8.1:65436889-65436908 | MS.gene071746:intron | 40.0% | |
| TGTCCATTTGTACCATCTCA+AGG | - | chr8.1:65438294-65438313 | MS.gene071746:CDS | 40.0% | |
| ! | ACCAACACTTACACCCATTT+TGG | + | chr8.1:65437120-65437139 | None:intergenic | 40.0% |
| ! | CAAAACTGGCTCATAAGGTA+AGG | - | chr8.1:65439411-65439430 | MS.gene071746:intron | 40.0% |
| ! | CCTTACAAAACTGGCTCATA+AGG | - | chr8.1:65439406-65439425 | MS.gene071746:intron | 40.0% |
| ! | CTTTTCTTGTCCAGCTCTTT+CGG | + | chr8.1:65438422-65438441 | None:intergenic | 40.0% |
| ! | GGTGTCATATCTCTTGATGA+CGG | - | chr8.1:65439961-65439980 | MS.gene071746:intron | 40.0% |
| ! | GTGTCATATCTCTTGATGAC+GGG | - | chr8.1:65439962-65439981 | MS.gene071746:intron | 40.0% |
| ! | GTTTTCGTCAGATATCCTAG+AGG | + | chr8.1:65437765-65437784 | None:intergenic | 40.0% |
| ! | TCGATTGAGGTATGTGGTTT+TGG | + | chr8.1:65438112-65438131 | None:intergenic | 40.0% |
| !! | AAGAGCGCTCTGAATATATC+AGG | - | chr8.1:65438131-65438150 | MS.gene071746:intron | 40.0% |
| !! | CCTTATGAGCCAGTTTTGTA+AGG | + | chr8.1:65439409-65439428 | None:intergenic | 40.0% |
| !! | GACAACAGTCTTGTTAGAGA+TGG | - | chr8.1:65439940-65439959 | MS.gene071746:intron | 40.0% |
| !!! | ATCGAGGTTTTCTGAAGTCA+AGG | + | chr8.1:65439539-65439558 | None:intergenic | 40.0% |
| AAGGATGACATAAGGGTCAC+TGG | + | chr8.1:65438771-65438790 | None:intergenic | 45.0% | |
| AGACAGTCTCACAAGTCACA+AGG | + | chr8.1:65437722-65437741 | None:intergenic | 45.0% | |
| CAACTATATGTTGGGCCACT+CGG | + | chr8.1:65439340-65439359 | None:intergenic | 45.0% | |
| CGAGGAACTGCAGTTTATGA+TGG | - | chr8.1:65438251-65438270 | MS.gene071746:CDS | 45.0% | |
| GAACATTCCTCCCCTTAAAG+TGG | - | chr8.1:65438976-65438995 | MS.gene071746:intron | 45.0% | |
| GACAGTCTCACAAGTCACAA+GGG | + | chr8.1:65437721-65437740 | None:intergenic | 45.0% | |
| GACGACTCACATTTCGACTT+TGG | - | chr8.1:65439221-65439240 | MS.gene071746:intron | 45.0% | |
| GATGCATTAGAGAAGTTGGG+TGG | - | chr8.1:65438031-65438050 | MS.gene071746:intron | 45.0% | |
| GCCAAAATGGGTGTAAGTGT+TGG | - | chr8.1:65437116-65437135 | MS.gene071746:intron | 45.0% | |
| GGCATGTATCTCCTTCTACA+TGG | + | chr8.1:65437544-65437563 | None:intergenic | 45.0% | |
| TGATGCATCAAGCTGGAAAC+AGG | - | chr8.1:65437067-65437086 | MS.gene071746:intron | 45.0% | |
| TTAAGGGGAGGAATGTTCTC+TGG | + | chr8.1:65438974-65438993 | None:intergenic | 45.0% | |
| ! | AACATCACGCTCTAGACATC+TGG | - | chr8.1:65439306-65439325 | MS.gene071746:intron | 45.0% |
| ! | AGGACCAAACTTGCTCAACT+AGG | - | chr8.1:65436815-65436834 | MS.gene071746:CDS | 45.0% |
| ! | CTGGAGTGTCAGATCAAGAT+CGG | - | chr8.1:65439199-65439218 | MS.gene071746:intron | 45.0% |
| ! | GAACTTACCACTTTAAGGGG+AGG | + | chr8.1:65438986-65439005 | None:intergenic | 45.0% |
| ! | GCGCTGACAAGACATCATAT+CGG | - | chr8.1:65438387-65438406 | MS.gene071746:CDS | 45.0% |
| !! | TCACTTGGTGTCCCAAAGAA+AGG | + | chr8.1:65438790-65438809 | None:intergenic | 45.0% |
| !!! | AACAGGTTTTGTGCCGATTG+CGG | - | chr8.1:65437084-65437103 | MS.gene071746:intron | 45.0% |
| !!! | ACTTACACCCATTTTGGCTC+TGG | + | chr8.1:65437114-65437133 | None:intergenic | 45.0% |
| ACCAGGACTTTCATGCCTTG+AGG | + | chr8.1:65436601-65436620 | None:intergenic | 50.0% | |
| CGCTCTTCGATTGAGGTATG+TGG | + | chr8.1:65438118-65438137 | None:intergenic | 50.0% | |
| CGGAACTCCAGAGCCAAAAT+GGG | - | chr8.1:65437104-65437123 | MS.gene071746:intron | 50.0% | |
| CGGTGCAGAGCCAATAGATT+CGG | + | chr8.1:65436930-65436949 | None:intergenic | 50.0% | |
| GACATGCATTCCGAAAGAGC+TGG | - | chr8.1:65438409-65438428 | MS.gene071746:intron | 50.0% | |
| TCCTCAAGGCATGAAAGTCC+TGG | - | chr8.1:65436597-65436616 | MS.gene071746:CDS | 50.0% | |
| ! | TTCAGAGCGCTCTTCGATTG+AGG | + | chr8.1:65438125-65438144 | None:intergenic | 50.0% |
| GCGGAACTCCAGAGCCAAAA+TGG | - | chr8.1:65437103-65437122 | MS.gene071746:intron | 55.0% | |
| !! | TGGCTCTGGAGTTCCGCAAT+CGG | + | chr8.1:65437100-65437119 | None:intergenic | 55.0% |
| CTCGAGCTGCATGGACTCGT+TGG | + | chr8.1:65439902-65439921 | None:intergenic | 60.0% | |
| ! | CATCTGGAGCGTGATCCGAG+TGG | - | chr8.1:65439322-65439341 | MS.gene071746:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 65436594 | 65440074 | 65436594 | ID=MS.gene071746 |
| chr8.1 | mRNA | 65436594 | 65440074 | 65436594 | ID=MS.gene071746.t1;Parent=MS.gene071746 |
| chr8.1 | exon | 65440032 | 65440074 | 65440032 | ID=MS.gene071746.t1.exon1;Parent=MS.gene071746.t1 |
| chr8.1 | CDS | 65440032 | 65440074 | 65440032 | ID=cds.MS.gene071746.t1;Parent=MS.gene071746.t1 |
| chr8.1 | exon | 65439541 | 65439625 | 65439541 | ID=MS.gene071746.t1.exon2;Parent=MS.gene071746.t1 |
| chr8.1 | CDS | 65439541 | 65439625 | 65439541 | ID=cds.MS.gene071746.t1;Parent=MS.gene071746.t1 |
| chr8.1 | exon | 65439307 | 65439382 | 65439307 | ID=MS.gene071746.t1.exon3;Parent=MS.gene071746.t1 |
| chr8.1 | CDS | 65439307 | 65439382 | 65439307 | ID=cds.MS.gene071746.t1;Parent=MS.gene071746.t1 |
| chr8.1 | exon | 65438516 | 65438679 | 65438516 | ID=MS.gene071746.t1.exon4;Parent=MS.gene071746.t1 |
| chr8.1 | CDS | 65438516 | 65438679 | 65438516 | ID=cds.MS.gene071746.t1;Parent=MS.gene071746.t1 |
| chr8.1 | exon | 65438189 | 65438426 | 65438189 | ID=MS.gene071746.t1.exon5;Parent=MS.gene071746.t1 |
| chr8.1 | CDS | 65438189 | 65438426 | 65438189 | ID=cds.MS.gene071746.t1;Parent=MS.gene071746.t1 |
| chr8.1 | exon | 65437863 | 65437979 | 65437863 | ID=MS.gene071746.t1.exon6;Parent=MS.gene071746.t1 |
| chr8.1 | CDS | 65437863 | 65437979 | 65437863 | ID=cds.MS.gene071746.t1;Parent=MS.gene071746.t1 |
| chr8.1 | exon | 65437671 | 65437766 | 65437671 | ID=MS.gene071746.t1.exon7;Parent=MS.gene071746.t1 |
| chr8.1 | CDS | 65437671 | 65437766 | 65437671 | ID=cds.MS.gene071746.t1;Parent=MS.gene071746.t1 |
| chr8.1 | exon | 65436594 | 65436875 | 65436594 | ID=MS.gene071746.t1.exon8;Parent=MS.gene071746.t1 |
| chr8.1 | CDS | 65436594 | 65436875 | 65436594 | ID=cds.MS.gene071746.t1;Parent=MS.gene071746.t1 |
| Gene Sequence |
| Protein sequence |
