AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072314


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072314.t1 MTR_8g012635 83.962 318 51 0 1 318 1 318 0.0 528
MS.gene072314.t1 MTR_8g012635 89.474 76 8 0 309 384 401 476 1.79e-36 138
MS.gene072314.t1 MTR_8g012650 83.333 318 53 0 1 318 1 318 3.21e-180 509
MS.gene072314.t1 MTR_8g012650 83.099 71 12 0 309 379 401 471 2.67e-32 127
MS.gene072314.t1 MTR_8g012745 79.683 315 64 0 1 315 1 315 2.48e-173 492
MS.gene072314.t1 MTR_8g012745 72.368 76 21 0 309 384 398 473 5.11e-27 112
MS.gene072314.t1 MTR_8g077590 67.647 306 94 3 4 308 7 308 8.79e-147 424
MS.gene072314.t1 MTR_8g077590 63.889 72 26 0 309 380 396 467 3.61e-21 95.1
MS.gene072314.t1 MTR_0078s0200 61.538 312 111 6 1 308 1 307 4.69e-133 383
MS.gene072314.t1 MTR_0184s0030 61.538 312 111 6 1 308 1 307 2.41e-131 385
MS.gene072314.t1 MTR_0184s0030 56.338 71 31 0 310 380 398 468 6.33e-19 88.6
MS.gene072314.t1 MTR_8g012630 53.630 427 148 13 1 384 1 420 5.29e-122 359
MS.gene072314.t1 MTR_8g008990 50.323 310 147 4 1 308 1 305 2.03e-95 293
MS.gene072314.t1 MTR_8g008990 49.275 69 35 0 310 378 399 467 2.95e-15 77.4
MS.gene072314.t1 MTR_7g047030 48.113 318 155 6 1 314 1 312 5.66e-95 292
MS.gene072314.t1 MTR_7g047030 41.667 72 41 1 310 380 396 467 4.79e-11 64.3
MS.gene072314.t1 MTR_7g047270 48.113 318 155 6 1 314 1 312 5.66e-95 292
MS.gene072314.t1 MTR_7g047270 41.667 72 41 1 310 380 396 467 4.79e-11 64.3
MS.gene072314.t1 MTR_8g009055 49.032 310 151 4 1 308 1 305 2.16e-93 288
MS.gene072314.t1 MTR_8g009055 47.826 69 36 0 310 378 397 465 4.66e-14 73.9
MS.gene072314.t1 MTR_0078s0010 45.858 338 168 6 1 328 1 333 7.16e-93 286
MS.gene072314.t1 MTR_0184s0040 47.853 326 162 5 1 323 16 336 3.06e-92 285
MS.gene072314.t1 MTR_0184s0040 41.892 74 43 0 310 383 411 484 8.82e-12 66.6
MS.gene072314.t1 MTR_0078s0190 47.853 326 162 5 1 323 16 336 3.06e-92 285
MS.gene072314.t1 MTR_0078s0190 41.892 74 43 0 310 383 411 484 8.82e-12 66.6
MS.gene072314.t1 MTR_8g009063 49.026 308 150 4 1 306 8 310 3.50e-91 282
MS.gene072314.t1 MTR_8g009063 53.968 63 29 0 310 372 404 466 8.09e-14 73.2
MS.gene072314.t1 MTR_1g019510 47.742 310 153 5 1 308 1 303 3.85e-91 282
MS.gene072314.t1 MTR_1g019510 46.377 69 37 0 310 378 394 462 1.94e-13 72.0
MS.gene072314.t1 MTR_8g006260 49.842 317 142 8 1 308 1 309 1.34e-90 281
MS.gene072314.t1 MTR_0078s0060 45.994 337 168 5 1 328 1 332 7.64e-90 279
MS.gene072314.t1 MTR_8g009050 48.710 310 152 4 1 308 1 305 1.50e-89 278
MS.gene072314.t1 MTR_8g009050 49.275 69 35 0 310 378 397 465 2.03e-14 74.7
MS.gene072314.t1 MTR_8g009067 49.032 310 151 4 1 308 1 305 4.82e-88 274
MS.gene072314.t1 MTR_8g009067 42.667 75 43 0 310 384 395 469 9.28e-13 69.7
MS.gene072314.t1 MTR_8g009073 46.774 310 158 4 1 308 1 305 1.26e-87 273
MS.gene072314.t1 MTR_8g009073 44.928 69 38 0 310 378 395 463 3.38e-12 68.2
MS.gene072314.t1 MTR_8g006270 48.243 313 146 8 1 308 1 302 2.76e-83 262
MS.gene072314.t1 MTR_6g005600 43.695 341 173 7 1 328 1 335 7.17e-83 261
MS.gene072314.t1 MTR_6g005600 54.930 71 32 0 310 380 398 468 1.69e-16 81.3
MS.gene072314.t1 MTR_8g012730 72.316 177 27 1 142 318 1 155 2.37e-82 254
MS.gene072314.t1 MTR_8g012730 86.842 76 10 0 309 384 238 313 2.73e-36 134
MS.gene072314.t1 MTR_8g008970 47.097 310 157 4 1 308 1 305 4.78e-82 266
MS.gene072314.t1 MTR_8g008970 53.846 104 47 1 190 293 527 629 1.21e-22 100
MS.gene072314.t1 MTR_8g008970 42.667 75 43 0 310 384 395 469 1.10e-12 70.1
MS.gene072314.t1 MTR_8g008970 53.226 62 29 0 311 372 720 781 2.05e-12 69.3
MS.gene072314.t1 MTR_6g023665 41.987 312 169 6 1 308 8 311 6.56e-70 227
MS.gene072314.t1 MTR_7g046490 45.484 310 159 5 1 308 1 302 1.24e-69 226
MS.gene072314.t1 MTR_7g046490 58.730 63 26 0 310 372 394 456 2.54e-14 74.7
MS.gene072314.t1 MTR_8g006730 38.953 344 187 9 1 330 1 335 1.56e-66 218
MS.gene072314.t1 MTR_7g117170 39.145 304 178 4 7 308 16 314 3.43e-66 218
MS.gene072314.t1 MTR_6g488280 40.064 312 175 6 1 308 1 304 2.71e-65 215
MS.gene072314.t1 MTR_0428s0010 40.064 312 175 6 1 308 1 304 2.71e-65 215
MS.gene072314.t1 MTR_8g006710 38.782 312 180 5 1 308 1 305 2.27e-61 205
MS.gene072314.t1 MTR_6g005660 43.580 257 136 5 1 252 1 253 1.05e-59 194
MS.gene072314.t1 MTR_8g006220 37.942 311 182 5 1 308 1 303 1.27e-59 201
MS.gene072314.t1 MTR_8g465670 37.864 309 181 5 3 308 4 304 1.88e-59 200
MS.gene072314.t1 MTR_8g009067 54.011 187 84 2 122 308 3 187 3.96e-59 196
MS.gene072314.t1 MTR_8g009067 42.667 75 43 0 310 384 277 351 1.74e-12 68.6
MS.gene072314.t1 MTR_8g012735 89.844 128 13 0 1 128 1 128 5.40e-58 185
MS.gene072314.t1 MTR_8g027885 37.134 307 174 7 7 308 19 311 1.11e-57 195
MS.gene072314.t1 MTR_8g027885 46.377 69 37 0 310 378 403 471 7.44e-13 70.1
MS.gene072314.t1 MTR_8g006230 42.149 242 137 3 67 308 9 247 1.48e-57 189
MS.gene072314.t1 MTR_8g027870 37.134 307 174 7 7 308 19 311 7.98e-57 193
MS.gene072314.t1 MTR_8g027870 46.377 69 37 0 310 378 403 471 7.78e-13 70.1
MS.gene072314.t1 MTR_8g009073 52.247 178 83 2 131 308 1 176 1.94e-55 186
MS.gene072314.t1 MTR_8g009073 44.928 69 38 0 310 378 266 334 5.17e-12 67.0
MS.gene072314.t1 MTR_8g074550 33.651 315 191 9 1 306 3 308 1.76e-45 164
MS.gene072314.t1 MTR_3g009510 31.325 332 209 11 5 324 4 328 1.72e-39 147
MS.gene072314.t1 MTR_5g019580 29.193 322 208 8 1 310 2 315 3.05e-39 146
MS.gene072314.t1 MTR_6g033725 30.460 348 212 10 8 337 4 339 6.95e-36 137
MS.gene072314.t1 MTR_5g090630 28.754 313 202 8 3 308 2 300 1.67e-32 127
MS.gene072314.t1 MTR_6g033660 32.129 249 158 5 61 306 70 310 6.36e-31 123
MS.gene072314.t1 MTR_5g019580 29.503 322 179 11 1 310 54 339 1.51e-30 122
MS.gene072314.t1 MTR_6g033615 29.373 303 191 6 16 310 14 301 1.58e-30 122
MS.gene072314.t1 MTR_6g033675 30.000 240 163 3 101 337 105 342 1.88e-30 122
MS.gene072314.t1 MTR_5g090670 28.086 324 201 12 3 308 2 311 2.15e-28 116
MS.gene072314.t1 MTR_6g033625 30.496 282 182 7 61 337 70 342 1.40e-26 110
MS.gene072314.t1 MTR_5g090700 27.900 319 208 11 3 308 2 311 1.50e-26 110
MS.gene072314.t1 MTR_5g098930 27.070 314 208 8 3 308 2 302 2.42e-26 110
MS.gene072314.t1 MTR_5g090660 27.885 312 213 8 3 308 2 307 4.18e-26 110
MS.gene072314.t1 MTR_5g090600 28.443 334 213 10 3 324 2 321 4.31e-26 109
MS.gene072314.t1 MTR_5g070040 27.052 329 201 10 1 308 6 316 1.08e-25 108
MS.gene072314.t1 MTR_5g090580 30.031 323 194 13 3 308 2 309 7.39e-25 105
MS.gene072314.t1 MTR_5g070090 27.419 310 210 10 3 303 8 311 7.41e-25 105
MS.gene072314.t1 MTR_5g090620 25.231 325 207 9 3 308 2 309 1.52e-24 105
MS.gene072314.t1 MTR_5g035580 28.779 344 193 12 6 325 13 328 1.69e-24 104
MS.gene072314.t1 MTR_5g035560 28.488 344 194 12 6 325 11 326 3.74e-23 101
MS.gene072314.t1 MTR_5g090610 26.646 319 196 11 3 308 2 295 1.01e-22 99.8
MS.gene072314.t1 MTR_2g040530 26.923 312 208 10 7 308 6 307 3.04e-22 98.2
MS.gene072314.t1 MTR_5g464760 27.463 335 197 11 6 306 12 334 2.38e-21 95.9
MS.gene072314.t1 MTR_0036s0220 26.000 350 214 10 6 322 12 349 3.79e-21 95.1
MS.gene072314.t1 MTR_6g038200 27.692 325 192 11 4 307 9 311 1.11e-19 90.5
MS.gene072314.t1 MTR_4g082810 29.911 224 140 6 124 331 124 346 1.48e-19 90.1
MS.gene072314.t1 MTR_5g464810 26.426 333 203 9 5 306 11 332 1.61e-19 90.5
MS.gene072314.t1 MTR_5g064240 26.426 333 203 9 5 306 11 332 1.61e-19 90.5
MS.gene072314.t1 MTR_2g046820 24.920 313 213 9 6 308 5 305 2.89e-19 89.4
MS.gene072314.t1 MTR_6g038220 25.223 337 184 9 4 307 9 310 5.15e-19 88.6
MS.gene072314.t1 MTR_6g052375 27.402 281 159 8 139 380 1 275 5.53e-19 87.4
MS.gene072314.t1 MTR_0009s0240 25.321 312 216 9 5 308 6 308 4.21e-18 85.9
MS.gene072314.t1 MTR_2g046750 26.019 319 205 12 6 308 5 308 4.45e-18 85.9
MS.gene072314.t1 MTR_4g082820 26.769 325 220 9 3 316 4 321 5.39e-18 85.9
MS.gene072314.t1 MTR_6g014186 25.000 368 197 13 55 358 65 417 8.76e-18 85.1
MS.gene072314.t1 MTR_5g090690 26.923 208 104 6 112 309 71 240 3.20e-17 82.8
MS.gene072314.t1 MTR_6g038300 23.100 329 202 11 4 307 9 311 3.61e-17 83.2
MS.gene072314.t1 MTR_8g059425 28.819 288 168 10 73 332 80 358 4.15e-17 83.2
MS.gene072314.t1 MTR_1g019520 70.000 50 15 0 259 308 3 52 4.73e-17 79.7
MS.gene072314.t1 MTR_1g019520 46.377 69 37 0 310 378 143 211 5.58e-13 68.2
MS.gene072314.t1 MTR_5g045960 27.586 319 182 13 3 305 34 319 6.39e-17 82.4
MS.gene072314.t1 MTR_6g013680 24.859 354 197 12 55 355 15 352 9.55e-17 81.3
MS.gene072314.t1 MTR_8g071070 24.843 318 220 8 5 308 6 318 1.07e-16 81.6
MS.gene072314.t1 MTR_6g038230 29.358 218 130 6 104 307 104 311 1.84e-16 80.9
MS.gene072314.t1 MTR_3g479520 25.275 273 167 5 67 306 68 336 1.95e-16 81.3
MS.gene072314.t1 MTR_3g008010 27.586 290 165 11 80 332 77 358 6.87e-16 79.3
MS.gene072314.t1 MTR_3g009500 26.596 282 165 13 1 253 1 269 8.89e-16 77.0
MS.gene072314.t1 MTR_6g078320 29.469 207 128 7 112 306 125 325 1.19e-15 78.6
MS.gene072314.t1 MTR_2g098430 27.055 292 180 11 53 322 48 328 1.24e-15 78.6
MS.gene072314.t1 MTR_3g479490 23.741 278 178 8 55 309 64 330 1.43e-15 78.6
MS.gene072314.t1 MTR_6g013435 26.522 230 117 8 170 355 61 282 1.54e-15 77.0
MS.gene072314.t1 MTR_4g094220 24.484 339 205 12 6 306 7 332 2.01e-15 77.8
MS.gene072314.t1 MTR_4g128720 24.000 325 234 6 6 324 15 332 2.83e-15 77.4
MS.gene072314.t1 MTR_5g090650 23.077 312 197 7 3 308 2 276 3.63e-15 76.3
MS.gene072314.t1 MTR_7g011470 28.638 213 124 7 109 306 121 320 3.96e-15 77.0
MS.gene072314.t1 MTR_3g079480 24.000 275 175 6 55 306 79 342 4.05e-15 77.0
MS.gene072314.t1 MTR_6g014020 27.393 303 185 9 55 332 68 360 4.14e-15 77.0
MS.gene072314.t1 MTR_4g485630 29.187 209 124 9 113 307 116 314 4.19e-15 77.0
MS.gene072314.t1 MTR_1g062380 27.178 287 154 12 41 307 78 329 4.49e-15 77.0
MS.gene072314.t1 MTR_5g072860 26.829 328 189 12 6 306 18 321 5.50e-15 76.6
MS.gene072314.t1 MTR_7g102550 28.028 289 145 14 41 305 71 320 6.03e-15 76.6
MS.gene072314.t1 MTR_7g102560 25.071 351 185 14 2 307 3 320 8.97e-15 75.9
MS.gene072314.t1 MTR_7g117405 29.302 215 114 7 113 307 125 321 9.17e-15 75.9
MS.gene072314.t1 MTR_7g013240 26.432 227 137 6 92 306 88 296 1.42e-14 75.1
MS.gene072314.t1 MTR_5g075440 22.840 324 217 6 6 313 10 316 1.79e-14 75.1
MS.gene072314.t1 MTR_4g485590 33.553 152 86 6 169 310 151 297 2.08e-14 74.7
MS.gene072314.t1 MTR_8g088560 29.717 212 122 9 109 305 110 309 2.12e-14 74.7
MS.gene072314.t1 MTR_6g014200 27.068 266 159 9 94 332 100 357 2.29e-14 74.7
MS.gene072314.t1 MTR_7g011470 28.169 213 121 7 109 306 121 316 4.03e-14 73.9
MS.gene072314.t1 MTR_6g014150 27.273 264 161 8 94 332 100 357 1.07e-13 72.8
MS.gene072314.t1 MTR_7g013260 27.632 228 149 6 85 306 80 297 1.30e-13 72.4
MS.gene072314.t1 MTR_6g014290 25.817 306 184 11 55 332 68 358 1.98e-13 72.0
MS.gene072314.t1 MTR_6g014250 27.757 263 159 8 94 332 103 358 2.28e-13 71.6
MS.gene072314.t1 MTR_4g008630 39.091 110 62 4 234 338 230 339 3.32e-13 71.2
MS.gene072314.t1 MTR_6g014187 26.070 257 160 8 94 327 103 352 3.48e-13 71.2
MS.gene072314.t1 MTR_3g479470 23.615 343 207 11 2 306 9 334 5.12e-13 70.5
MS.gene072314.t1 MTR_2g008210 26.923 286 169 11 53 306 51 328 5.65e-13 70.5
MS.gene072314.t1 MTR_8g068340 38.462 117 64 4 191 306 207 316 5.75e-13 70.5
MS.gene072314.t1 MTR_6g038240 23.708 329 196 13 6 307 11 311 6.13e-13 70.5
MS.gene072314.t1 MTR_0288s0020 27.200 250 151 8 94 328 104 337 6.30e-13 70.1
MS.gene072314.t1 MTR_1g107350 27.935 247 146 12 107 336 113 344 6.44e-13 70.5
MS.gene072314.t1 MTR_6g013440 28.571 266 155 9 94 332 104 361 9.43e-13 69.7
MS.gene072314.t1 MTR_4g485640 36.190 105 56 2 209 305 401 502 9.87e-13 70.1
MS.gene072314.t1 MTR_5g045970 27.305 282 159 12 41 307 78 328 1.21e-12 69.3
MS.gene072314.t1 MTR_6g035265 36.364 110 58 4 207 307 200 306 1.25e-12 69.3
MS.gene072314.t1 MTR_8g066610 25.749 334 184 15 2 310 33 327 1.34e-12 69.3
MS.gene072314.t1 MTR_4g117890 37.273 110 57 4 207 307 201 307 1.39e-12 69.3
MS.gene072314.t1 MTR_3g009520 30.345 145 93 3 107 244 110 253 1.49e-12 67.8
MS.gene072314.t1 MTR_4g064987 28.511 235 147 9 110 333 109 333 1.53e-12 68.9
MS.gene072314.t1 MTR_8g068330 43.299 97 51 2 211 306 219 312 1.54e-12 68.9
MS.gene072314.t1 MTR_4g064987 29.787 235 138 11 110 333 109 327 1.54e-12 68.9
MS.gene072314.t1 MTR_7g013180 24.444 315 211 11 6 307 5 305 1.68e-12 68.9
MS.gene072314.t1 MTR_6g014220 25.538 372 215 18 3 332 7 358 1.78e-12 68.9
MS.gene072314.t1 MTR_6g013920 24.904 261 163 7 94 328 102 355 1.78e-12 68.9
MS.gene072314.t1 MTR_7g080940 22.424 330 205 10 1 306 6 308 1.94e-12 68.9
MS.gene072314.t1 MTR_7g102520 25.610 328 181 14 3 306 37 325 2.16e-12 68.9
MS.gene072314.t1 MTR_7g102450 25.591 254 128 9 123 337 90 321 2.66e-12 68.6
MS.gene072314.t1 MTR_7g013200 23.718 312 207 9 6 306 5 296 2.92e-12 68.2
MS.gene072314.t1 MTR_1g032490 26.230 244 154 9 107 336 115 346 3.07e-12 68.2
MS.gene072314.t1 MTR_7g102490 35.714 112 58 3 207 307 217 325 3.29e-12 68.2
MS.gene072314.t1 MTR_4g031800 36.697 109 56 3 207 305 204 309 3.40e-12 68.2
MS.gene072314.t1 MTR_5g098960 30.303 264 148 13 76 322 76 320 4.28e-12 67.8
MS.gene072314.t1 MTR_3g049970 27.064 218 130 11 107 308 114 318 4.30e-12 67.8
MS.gene072314.t1 MTR_4g118000 34.545 110 60 4 207 307 197 303 4.35e-12 67.8
MS.gene072314.t1 MTR_0536s0020 36.364 110 58 4 207 307 206 312 4.78e-12 67.8
MS.gene072314.t1 MTR_4g485620 27.160 162 106 4 170 322 158 316 6.31e-12 67.0
MS.gene072314.t1 MTR_6g014040 28.625 269 151 11 94 332 104 361 6.38e-12 67.4
MS.gene072314.t1 MTR_6g014310 27.820 266 143 10 81 306 79 335 7.84e-12 67.0
MS.gene072314.t1 MTR_4g095008 26.190 210 134 7 114 311 115 315 8.92e-12 67.0
MS.gene072314.t1 MTR_7g012120 36.449 107 57 4 207 305 212 315 1.21e-11 66.2
MS.gene072314.t1 MTR_6g014170 28.897 263 140 12 94 332 103 342 1.32e-11 66.2
MS.gene072314.t1 MTR_7g080935 24.074 216 140 4 105 306 103 308 1.61e-11 65.9
MS.gene072314.t1 MTR_5g087620 25.670 261 152 11 98 333 116 359 1.64e-11 65.9
MS.gene072314.t1 MTR_6g014270 26.038 265 163 9 94 332 102 359 1.82e-11 65.9
MS.gene072314.t1 MTR_1g107315 27.459 244 146 11 107 332 113 343 2.06e-11 65.5
MS.gene072314.t1 MTR_3g479610 28.846 156 92 4 165 306 16 166 2.35e-11 64.7
MS.gene072314.t1 MTR_3g069710 30.657 137 85 5 175 306 173 304 4.07e-11 64.7
MS.gene072314.t1 MTR_6g035185 33.065 124 70 5 194 307 195 315 6.16e-11 64.3
MS.gene072314.t1 MTR_6g013960 26.106 226 139 6 103 306 115 334 6.46e-11 63.9
MS.gene072314.t1 MTR_7g102460 34.091 132 72 3 207 328 216 342 7.09e-11 63.9
MS.gene072314.t1 MTR_6g013900 25.000 236 150 6 94 306 102 333 9.47e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072314.t1 AT4G01070 40.323 310 176 6 2 308 4 307 7.31e-72 228
MS.gene072314.t1 AT4G01070 40.323 310 176 6 2 308 4 307 9.51e-71 229
MS.gene072314.t1 AT1G01390 40.064 312 178 7 2 310 4 309 6.68e-66 217
MS.gene072314.t1 AT1G01390 40.064 312 178 7 2 310 21 326 9.51e-66 217
MS.gene072314.t1 AT1G01420 39.016 305 179 6 6 308 8 307 1.71e-64 213
MS.gene072314.t1 AT1G01420 39.016 305 179 6 6 308 11 310 2.15e-64 213
MS.gene072314.t1 AT5G66690 31.290 310 198 8 6 311 7 305 1.52e-39 147
MS.gene072314.t1 AT5G26310 30.323 310 201 8 6 311 7 305 5.81e-39 145
MS.gene072314.t1 AT3G16520 32.400 250 160 5 90 336 96 339 1.44e-38 144
MS.gene072314.t1 AT3G16520 32.400 250 160 5 90 336 96 339 2.07e-38 143
MS.gene072314.t1 AT3G16520 32.400 250 160 5 90 336 96 339 2.80e-38 143
MS.gene072314.t1 AT2G18570 30.449 312 198 12 6 308 5 306 2.74e-37 140
MS.gene072314.t1 AT2G18560 40.000 200 111 7 113 308 22 216 1.06e-34 132
MS.gene072314.t1 AT3G50740 29.430 316 201 10 6 311 7 310 2.45e-33 130
MS.gene072314.t1 AT1G07260 29.538 325 203 9 1 306 1 318 1.13e-28 117
MS.gene072314.t1 AT1G07250 29.052 327 203 11 1 306 1 319 4.86e-28 115
MS.gene072314.t1 AT4G36770 28.481 316 200 9 6 310 4 304 1.71e-27 113
MS.gene072314.t1 AT2G29750 28.490 351 213 15 5 326 7 348 7.25e-25 106
MS.gene072314.t1 AT2G29740 30.091 329 199 14 1 306 1 321 2.35e-24 104
MS.gene072314.t1 AT3G21790 27.103 321 202 10 6 306 4 312 7.01e-23 100
MS.gene072314.t1 AT3G21750 30.476 210 137 5 102 306 96 301 7.73e-23 100
MS.gene072314.t1 AT1G07240 28.182 330 208 11 3 311 2 323 2.85e-22 98.6
MS.gene072314.t1 AT3G21800 25.080 311 215 9 7 306 6 309 8.34e-22 97.1
MS.gene072314.t1 AT2G29730 25.237 317 220 10 3 307 2 313 3.10e-21 95.5
MS.gene072314.t1 AT2G31790 28.049 328 193 12 2 307 4 310 6.59e-21 94.4
MS.gene072314.t1 AT3G21760 28.279 244 153 9 108 335 114 351 2.43e-20 92.8
MS.gene072314.t1 AT1G05680 23.830 470 241 15 1 375 1 448 6.18e-19 88.6
MS.gene072314.t1 AT2G30140 27.044 318 191 11 6 306 13 306 2.08e-18 87.0
MS.gene072314.t1 AT2G30140 26.498 317 193 11 6 306 13 305 2.92e-18 86.7
MS.gene072314.t1 AT4G15480 28.505 214 138 5 109 314 126 332 3.39e-18 86.7
MS.gene072314.t1 AT3G21780 25.329 304 206 11 13 306 11 303 4.78e-18 85.9
MS.gene072314.t1 AT1G05675 22.993 461 256 11 1 375 1 448 5.35e-18 85.9
MS.gene072314.t1 AT2G29710 22.857 315 227 8 3 306 2 311 5.35e-18 85.9
MS.gene072314.t1 AT1G22400 27.757 263 159 8 69 306 79 335 6.87e-18 85.5
MS.gene072314.t1 AT4G15280 23.242 327 203 10 7 306 3 308 1.26e-17 84.7
MS.gene072314.t1 AT1G24100 22.766 470 237 17 6 375 11 454 1.48e-17 84.3
MS.gene072314.t1 AT4G15490 24.699 332 215 13 2 311 4 322 1.93e-17 84.3
MS.gene072314.t1 AT4G15280 23.242 327 203 10 7 306 35 340 2.01e-17 84.3
MS.gene072314.t1 AT1G10400 24.768 323 190 12 41 352 68 348 2.42e-17 84.0
MS.gene072314.t1 AT1G22370 24.260 338 206 11 2 306 9 329 4.45e-17 83.2
MS.gene072314.t1 AT4G15260 27.692 195 127 6 118 306 2 188 5.09e-17 82.0
MS.gene072314.t1 AT5G03490 24.377 361 231 15 2 341 15 354 7.44e-17 82.4
MS.gene072314.t1 AT2G36970 29.956 227 142 5 98 314 111 330 9.28e-17 82.0
MS.gene072314.t1 AT1G22380 25.714 280 164 10 55 306 71 334 1.10e-16 82.0
MS.gene072314.t1 AT1G73880 26.061 330 199 14 5 310 13 321 1.26e-16 81.6
MS.gene072314.t1 AT2G31750 25.826 333 191 14 2 307 5 308 1.75e-16 81.3
MS.gene072314.t1 AT2G31750 25.826 333 191 14 2 307 5 308 2.51e-16 80.9
MS.gene072314.t1 AT1G22360 23.324 343 210 10 1 306 5 331 1.04e-15 79.0
MS.gene072314.t1 AT5G59590 26.730 318 197 14 3 306 7 302 1.07e-15 78.6
MS.gene072314.t1 AT1G22360 23.324 343 210 10 1 306 5 331 1.15e-15 79.0
MS.gene072314.t1 AT1G22340 28.099 242 134 9 94 306 104 334 2.65e-15 77.8
MS.gene072314.t1 AT2G28080 28.708 209 133 7 110 309 127 328 3.47e-15 77.4
MS.gene072314.t1 AT1G78270 27.848 237 140 6 94 306 104 333 3.94e-15 77.0
MS.gene072314.t1 AT2G16890 27.273 286 186 9 57 331 69 343 3.98e-15 77.0
MS.gene072314.t1 AT2G16890 27.273 286 186 9 57 331 69 343 6.43e-15 76.6
MS.gene072314.t1 AT2G43820 27.273 330 180 13 3 306 4 299 1.15e-14 75.5
MS.gene072314.t1 AT4G15500 23.754 341 223 11 6 324 9 334 1.32e-14 75.5
MS.gene072314.t1 AT1G51210 27.206 272 178 9 48 309 58 319 4.01e-14 73.9
MS.gene072314.t1 AT3G21560 24.354 271 165 10 67 307 64 324 4.81e-14 73.9
MS.gene072314.t1 AT2G26480 32.843 204 117 7 113 306 104 297 5.14e-14 73.6
MS.gene072314.t1 AT2G43840 26.140 329 179 11 6 306 7 299 9.10e-14 72.8
MS.gene072314.t1 AT4G34131 27.404 208 132 7 113 309 129 328 9.68e-14 72.8
MS.gene072314.t1 AT5G14860 24.932 365 226 14 1 331 1 351 1.03e-13 72.8
MS.gene072314.t1 AT2G15480 27.670 206 132 6 112 307 128 326 1.19e-13 72.8
MS.gene072314.t1 AT2G15480 27.670 206 132 6 112 307 128 326 1.27e-13 72.4
MS.gene072314.t1 AT2G43840 25.836 329 180 11 6 306 7 299 2.13e-13 71.6
MS.gene072314.t1 AT5G59580 34.752 141 82 4 169 306 167 300 2.82e-13 71.2
MS.gene072314.t1 AT3G46650 32.484 157 92 6 156 306 137 285 3.16e-13 71.2
MS.gene072314.t1 AT2G30150 25.962 312 203 11 6 306 13 307 3.26e-13 71.2
MS.gene072314.t1 AT5G12890 26.558 369 223 18 2 340 4 354 3.47e-13 71.2
MS.gene072314.t1 AT3G53160 37.615 109 57 3 207 307 215 320 5.46e-13 70.5
MS.gene072314.t1 AT1G22370 33.065 124 63 3 197 306 42 159 7.17e-13 69.3
MS.gene072314.t1 AT5G38040 32.857 140 85 4 170 306 170 303 7.96e-13 70.1
MS.gene072314.t1 AT2G15490 25.991 227 151 5 112 328 125 344 8.39e-13 70.1
MS.gene072314.t1 AT2G15490 26.961 204 132 5 112 305 125 321 8.96e-13 70.1
MS.gene072314.t1 AT2G36800 36.111 108 58 3 207 306 220 324 9.37e-13 69.7
MS.gene072314.t1 AT2G36780 34.259 108 60 3 207 306 221 325 2.68e-12 68.6
MS.gene072314.t1 AT3G53150 39.286 112 55 3 205 306 227 335 3.04e-12 68.6
MS.gene072314.t1 AT2G36760 34.259 108 60 3 207 306 221 325 3.15e-12 68.2
MS.gene072314.t1 AT5G37950 27.861 201 131 7 110 306 83 273 3.27e-12 67.4
MS.gene072314.t1 AT2G36770 34.259 108 60 3 207 306 221 325 3.42e-12 68.2
MS.gene072314.t1 AT3G46670 26.266 316 199 12 4 306 7 301 3.50e-12 68.2
MS.gene072314.t1 AT4G34135 28.169 213 120 9 113 307 130 327 3.80e-12 67.4
MS.gene072314.t1 AT5G38010 30.935 139 89 4 170 306 174 307 3.95e-12 67.8
MS.gene072314.t1 AT2G30150 26.230 305 197 11 13 306 4 291 4.67e-12 67.4
MS.gene072314.t1 AT4G34135 28.169 213 120 9 113 307 130 327 5.72e-12 67.4
MS.gene072314.t1 AT3G46680 34.074 135 79 4 175 306 175 302 8.11e-12 67.0
MS.gene072314.t1 AT5G37950 32.857 140 85 5 170 306 146 279 9.65e-12 66.2
MS.gene072314.t1 AT5G17050 22.910 323 215 12 3 307 9 315 2.27e-11 65.5
MS.gene072314.t1 AT2G36750 34.259 108 60 4 207 306 216 320 4.27e-11 64.7
MS.gene072314.t1 AT3G46700 26.291 213 124 8 110 306 102 297 7.59e-11 63.9

Find 78 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGAATAGTTTCTCAAAAT+TGG 0.139212 8.3:+76042011 MS.gene072314:CDS
AGGGAGGAAAATGTAGTTTA+TGG 0.162266 8.3:-76041560 None:intergenic
GTCTCTTGCTCATGGTTTCT+TGG 0.188968 8.3:+76041990 MS.gene072314:CDS
AACCACCAAATTAGTTTATA+TGG 0.210146 8.3:+76042074 MS.gene072314:CDS
TCCAACCATATAAACTAATT+TGG 0.216735 8.3:-76042079 None:intergenic
GGTAAGTCTTGTTTGTTTAT+TGG 0.261296 8.3:-76041583 None:intergenic
CACTGACCTTATTCAGGTTC+CGG 0.293310 8.3:+76041870 MS.gene072314:CDS
CAAATCAATGAACTAGCTTT+GGG 0.298578 8.3:+76042234 MS.gene072314:CDS
ATCGATCTAGTCCTGCTTAT+AGG 0.301573 8.3:+76041941 MS.gene072314:CDS
TTTGAACCAGTTTGTATGAT+TGG 0.327983 8.3:-76042102 None:intergenic
AAGATAAAATTTAATGAGAA+TGG 0.342454 8.3:+76042603 MS.gene072314:CDS
AGATCACACTGACCTTATTC+AGG 0.344806 8.3:+76041864 MS.gene072314:CDS
ACAAATCAATGAACTAGCTT+TGG 0.348880 8.3:+76042233 MS.gene072314:CDS
CACACATACAAAACTGAGTT+TGG 0.360752 8.3:-76042180 None:intergenic
ACTGACCTTATTCAGGTTCC+GGG 0.364642 8.3:+76041871 MS.gene072314:CDS
GACAACCCGGAACCTGAATA+AGG 0.398342 8.3:-76041876 None:intergenic
ATGAGCAAGAGACAAGTTCT+TGG 0.401210 8.3:-76041980 None:intergenic
AAAATTCAGGAGGGAGATCT+TGG 0.406030 8.3:-76041912 None:intergenic
GAAGAGATTCAAGTAATTTG+AGG 0.412183 8.3:-76041531 None:intergenic
AATAGTAGTGATGAGTCAAA+TGG 0.429041 8.3:+76042123 MS.gene072314:CDS
TCAAGTAATTTGAGGGTGGC+AGG 0.435781 8.3:-76041523 None:intergenic
AAGAGATTCAAGTAATTTGA+GGG 0.437453 8.3:-76041530 None:intergenic
ACCAAATTAGTTTATATGGT+TGG 0.441772 8.3:+76042078 MS.gene072314:CDS
AAGTCTTGTTTGTTTATTGG+AGG 0.447695 8.3:-76041580 None:intergenic
AAGAACTTGTCTCTTGCTCA+TGG 0.449530 8.3:+76041982 MS.gene072314:CDS
TCTAATGCTTGACTTGCAAA+AGG 0.450467 8.3:-76041727 None:intergenic
AGTCTTGTTTGTTTATTGGA+GGG 0.459309 8.3:-76041579 None:intergenic
GGGAGATCTTGGCCACGAAT+AGG 0.461620 8.3:-76041901 None:intergenic
TTTGTTGTGCTCCTCTTGCA+AGG 0.467762 8.3:-76042052 None:intergenic
ATCTTCACCAGTGGTAGCAT+TGG 0.471366 8.3:+76041696 MS.gene072314:CDS
AAAACTCAATAATAGAACTT+TGG 0.473411 8.3:-76041429 None:intergenic
GTTGGACCAATCATACAAAC+TGG 0.474073 8.3:+76042096 MS.gene072314:CDS
CAAGTGTAATGAAGTTATCA+TGG 0.479140 8.3:-76041800 None:intergenic
TTGTATGTGTGCTTTGGAAG+TGG 0.481926 8.3:+76042192 MS.gene072314:CDS
GGCAGGGATAGGTGCATCAA+TGG 0.485497 8.3:-76041506 None:intergenic
AACAGCAATTTGCGAAAAGA+TGG 0.490067 8.3:-76041652 None:intergenic
GCTTGTGCATTAGCAGAAGA+TGG 0.492975 8.3:+76042729 MS.gene072314:CDS
ATTAGTAGAGGGGCTTAGAG+TGG 0.497087 8.3:+76042575 MS.gene072314:intron
GGGATAGGTGCATCAATGGT+GGG 0.498984 8.3:-76041502 None:intergenic
AACCATATAAACTAATTTGG+TGG 0.500452 8.3:-76042076 None:intergenic
TTAGTAGAGGGGCTTAGAGT+GGG 0.506156 8.3:+76042576 MS.gene072314:intron
GAACTTTGGTGGCTAAATAG+AGG 0.506555 8.3:-76041415 None:intergenic
CAATGAACTAGCTTTGGGGT+TGG 0.507900 8.3:+76042239 MS.gene072314:CDS
AAAATGTAGTTTATGGATGA+AGG 0.510370 8.3:-76041553 None:intergenic
AATTTGAGGGTGGCAGGGAT+AGG 0.515661 8.3:-76041517 None:intergenic
GAGTAATCAGAAATTCTTGT+GGG 0.518458 8.3:+76042266 MS.gene072314:CDS
GTGGTTAGAGATCTAATGCT+TGG 0.520630 8.3:+76042654 MS.gene072314:CDS
CCGGGTTGTCTACCTATTCG+TGG 0.521978 8.3:+76041889 MS.gene072314:CDS
GAAGTTATCATGGCAGAAAG+TGG 0.525147 8.3:-76041790 None:intergenic
GGAAGTATACAAAAGATAAG+AGG 0.531713 8.3:-76041768 None:intergenic
GTCCATCTGTTTGAAGTGGT+TGG 0.532313 8.3:+76042146 MS.gene072314:CDS
CTCCAACCACTTCAAACAGA+TGG 0.532982 8.3:-76042148 None:intergenic
CTTGTTTGTTTATTGGAGGG+AGG 0.533242 8.3:-76041576 None:intergenic
ACTCAATAATAGAACTTTGG+TGG 0.533404 8.3:-76041426 None:intergenic
AGGGATAGGTGCATCAATGG+TGG 0.547654 8.3:-76041503 None:intergenic
CTTGGAAAACGAATTGGCAA+CGG 0.565873 8.3:+76041618 MS.gene072314:CDS
ATAGTAGTGATGAGTCAAAT+GGG 0.567811 8.3:+76042124 MS.gene072314:CDS
CAAGTAATTTGAGGGTGGCA+GGG 0.572060 8.3:-76041522 None:intergenic
CAATTTGCGAAAAGATGGCA+TGG 0.573766 8.3:-76041647 None:intergenic
GGATAGGTGCATCAATGGTG+GGG 0.586356 8.3:-76041501 None:intergenic
AAGTTATCATGGCAGAAAGT+GGG 0.587411 8.3:-76041789 None:intergenic
CTTGTGCATTAGCAGAAGAT+GGG 0.594792 8.3:+76042730 MS.gene072314:CDS
AAGAGAGGAAATAGCTAAGG+TGG 0.598078 8.3:+76042635 MS.gene072314:CDS
AACTTCAATATCTTCACCAG+TGG 0.598609 8.3:+76041687 MS.gene072314:CDS
TACAGTCAAAGCCTTGCAAG+AGG 0.608359 8.3:+76042041 MS.gene072314:CDS
GAAACTTGTTCATGCAGTGT+CGG 0.608417 8.3:-76041829 None:intergenic
GAATGGCATTGCTGAAAGAG+AGG 0.611043 8.3:+76042620 MS.gene072314:CDS
TCAACAACCAATGCTACCAC+TGG 0.613690 8.3:-76041703 None:intergenic
TGAAAGAGAGGAAATAGCTA+AGG 0.619670 8.3:+76042632 MS.gene072314:CDS
TATGTGTGCTTTGGAAGTGG+AGG 0.625511 8.3:+76042195 MS.gene072314:CDS
TGAGTAATCAGAAATTCTTG+TGG 0.635550 8.3:+76042265 MS.gene072314:CDS
ATGGGTCCATCTGTTTGAAG+TGG 0.637105 8.3:+76042142 MS.gene072314:CDS
AAATGCAAGTGATATGAATG+TGG 0.645467 8.3:-76041477 None:intergenic
AGATTCAAGTAATTTGAGGG+TGG 0.645541 8.3:-76041527 None:intergenic
AAGTGATATGAATGTGGTGA+TGG 0.646524 8.3:-76041471 None:intergenic
AAATCAATGAACTAGCTTTG+GGG 0.647858 8.3:+76042235 MS.gene072314:CDS
CCACGAATAGGTAGACAACC+CGG 0.660277 8.3:-76041889 None:intergenic
AGATATTGAAGTTGAACACA+AGG 0.670259 8.3:-76041677 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATAAAATTTAATGAGAA+TGG + chr8.3:76042603-76042622 MS.gene072314:CDS 15.0%
!!! AATTCTATTTTATTAGTAGA+GGG + chr8.3:76042564-76042583 MS.gene072314:intron 15.0%
!! AAAACTCAATAATAGAACTT+TGG - chr8.3:76041432-76041451 None:intergenic 20.0%
!!! ATTCTATTTTATTAGTAGAG+GGG + chr8.3:76042565-76042584 MS.gene072314:intron 20.0%
!!! GAATTCTATTTTATTAGTAG+AGG + chr8.3:76042563-76042582 MS.gene072314:intron 20.0%
! AAAATGTAGTTTATGGATGA+AGG - chr8.3:76041556-76041575 None:intergenic 25.0%
! AACCATATAAACTAATTTGG+TGG - chr8.3:76042079-76042098 None:intergenic 25.0%
! AAGAGATTCAAGTAATTTGA+GGG - chr8.3:76041533-76041552 None:intergenic 25.0%
! ATTATTTGATCACCAAACAA+TGG - chr8.3:76042543-76042562 None:intergenic 25.0%
! TCCAACCATATAAACTAATT+TGG - chr8.3:76042082-76042101 None:intergenic 25.0%
!! AACCACCAAATTAGTTTATA+TGG + chr8.3:76042074-76042093 MS.gene072314:CDS 25.0%
!! ACCAAATTAGTTTATATGGT+TGG + chr8.3:76042078-76042097 MS.gene072314:CDS 25.0%
!! TATTAAAGTACTTACCACAT+GGG + chr8.3:76042361-76042380 MS.gene072314:intron 25.0%
!!! AACAACTAATCCTTGTTTTT+TGG - chr8.3:76042400-76042419 None:intergenic 25.0%
!!! TCTACATCTTTAGAATTACT+TGG - chr8.3:76042303-76042322 None:intergenic 25.0%
AAATGCAAGTGATATGAATG+TGG - chr8.3:76041480-76041499 None:intergenic 30.0%
AATAGTAGTGATGAGTCAAA+TGG + chr8.3:76042123-76042142 MS.gene072314:CDS 30.0%
ACAATGTGTTAAAAATCCAC+CGG - chr8.3:76042466-76042485 None:intergenic 30.0%
ACTCAATAATAGAACTTTGG+TGG - chr8.3:76041429-76041448 None:intergenic 30.0%
AGATATTGAAGTTGAACACA+AGG - chr8.3:76041680-76041699 None:intergenic 30.0%
ATAGTAGTGATGAGTCAAAT+GGG + chr8.3:76042124-76042143 MS.gene072314:CDS 30.0%
CAAGTGTAATGAAGTTATCA+TGG - chr8.3:76041803-76041822 None:intergenic 30.0%
CATGTGGTAAGTACTTTAAT+AGG - chr8.3:76042362-76042381 None:intergenic 30.0%
GAAGAGATTCAAGTAATTTG+AGG - chr8.3:76041534-76041553 None:intergenic 30.0%
GAGTAATCAGAAATTCTTGT+GGG + chr8.3:76042266-76042285 MS.gene072314:CDS 30.0%
GATCATGAAAAAATTCAGGA+GGG - chr8.3:76041924-76041943 None:intergenic 30.0%
GATCGATCATGAAAAAATTC+AGG - chr8.3:76041928-76041947 None:intergenic 30.0%
GATTACAAAATTGCTGCAAT+AGG + chr8.3:76042321-76042340 MS.gene072314:intron 30.0%
GGTGAATAGTTTCTCAAAAT+TGG + chr8.3:76042011-76042030 MS.gene072314:CDS 30.0%
TGAAGAAAAATCCTATAAGC+AGG - chr8.3:76041955-76041974 None:intergenic 30.0%
TGAGTAATCAGAAATTCTTG+TGG + chr8.3:76042265-76042284 MS.gene072314:CDS 30.0%
TTAGAGAGAACCAAAAAACA+AGG + chr8.3:76042387-76042406 MS.gene072314:intron 30.0%
TTTGAACCAGTTTGTATGAT+TGG - chr8.3:76042105-76042124 None:intergenic 30.0%
! ACAAATCAATGAACTAGCTT+TGG + chr8.3:76042233-76042252 MS.gene072314:CDS 30.0%
! CTATTAAAGTACTTACCACA+TGG + chr8.3:76042360-76042379 MS.gene072314:intron 30.0%
! GATTTTTAACACATTGTGGT+TGG + chr8.3:76042469-76042488 MS.gene072314:intron 30.0%
! GGAAGTATACAAAAGATAAG+AGG - chr8.3:76041771-76041790 None:intergenic 30.0%
!! AAATCAATGAACTAGCTTTG+GGG + chr8.3:76042235-76042254 MS.gene072314:CDS 30.0%
!! AAGGATTAGTTGTTCTTCTT+TGG + chr8.3:76042406-76042425 MS.gene072314:intron 30.0%
!! AAGTCTTGTTTGTTTATTGG+AGG - chr8.3:76041583-76041602 None:intergenic 30.0%
!! AGGATTAGTTGTTCTTCTTT+GGG + chr8.3:76042407-76042426 MS.gene072314:intron 30.0%
!! AGTCTTGTTTGTTTATTGGA+GGG - chr8.3:76041582-76041601 None:intergenic 30.0%
!! CAAATCAATGAACTAGCTTT+GGG + chr8.3:76042234-76042253 MS.gene072314:CDS 30.0%
!! GGTAAGTCTTGTTTGTTTAT+TGG - chr8.3:76041586-76041605 None:intergenic 30.0%
!!! ACAAGAGCACTTTTTGAATT+CGG + chr8.3:76042759-76042778 MS.gene072314:CDS 30.0%
AACAGCAATTTGCGAAAAGA+TGG - chr8.3:76041655-76041674 None:intergenic 35.0%
AACTTCAATATCTTCACCAG+TGG + chr8.3:76041687-76041706 MS.gene072314:CDS 35.0%
AAGTGATATGAATGTGGTGA+TGG - chr8.3:76041474-76041493 None:intergenic 35.0%
AAGTTATCATGGCAGAAAGT+GGG - chr8.3:76041792-76041811 None:intergenic 35.0%
AGATTCAAGTAATTTGAGGG+TGG - chr8.3:76041530-76041549 None:intergenic 35.0%
AGGGAGGAAAATGTAGTTTA+TGG - chr8.3:76041563-76041582 None:intergenic 35.0%
CACACATACAAAACTGAGTT+TGG - chr8.3:76042183-76042202 None:intergenic 35.0%
CGATCATGAAAAAATTCAGG+AGG - chr8.3:76041925-76041944 None:intergenic 35.0%
TGAAAGAGAGGAAATAGCTA+AGG + chr8.3:76042632-76042651 MS.gene072314:CDS 35.0%
! TTTTGCCTTGGAAAACGAAT+TGG + chr8.3:76041612-76041631 MS.gene072314:CDS 35.0%
!! AACACTTGAGAGTATTGTGT+CGG + chr8.3:76042497-76042516 MS.gene072314:intron 35.0%
!! GGTGGATTTTTAACACATTG+TGG + chr8.3:76042465-76042484 MS.gene072314:intron 35.0%
!! TCAGTTTTGTATGTGTGCTT+TGG + chr8.3:76042186-76042205 MS.gene072314:CDS 35.0%
!! TCTAATGCTTGACTTGCAAA+AGG - chr8.3:76041730-76041749 None:intergenic 35.0%
!! TTCAAAAAGTGCTCTTGTAG+AGG - chr8.3:76042757-76042776 None:intergenic 35.0%
AAAATTCAGGAGGGAGATCT+TGG - chr8.3:76041915-76041934 None:intergenic 40.0%
AACAATGGCCAAGTTACCAT+TGG - chr8.3:76042528-76042547 None:intergenic 40.0%
AAGAACTTGTCTCTTGCTCA+TGG + chr8.3:76041982-76042001 MS.gene072314:CDS 40.0%
AAGAGAGGAAATAGCTAAGG+TGG + chr8.3:76042635-76042654 MS.gene072314:CDS 40.0%
AGATCACACTGACCTTATTC+AGG + chr8.3:76041864-76041883 MS.gene072314:CDS 40.0%
ATCGATCTAGTCCTGCTTAT+AGG + chr8.3:76041941-76041960 MS.gene072314:CDS 40.0%
ATGAGCAAGAGACAAGTTCT+TGG - chr8.3:76041983-76042002 None:intergenic 40.0%
ATGGTAACTTGGCCATTGTT+TGG + chr8.3:76042528-76042547 MS.gene072314:intron 40.0%
CAATTTGCGAAAAGATGGCA+TGG - chr8.3:76041650-76041669 None:intergenic 40.0%
CTTGGAAAACGAATTGGCAA+CGG + chr8.3:76041618-76041637 MS.gene072314:CDS 40.0%
CTTGTGCATTAGCAGAAGAT+GGG + chr8.3:76042730-76042749 MS.gene072314:CDS 40.0%
CTTGTTTGTTTATTGGAGGG+AGG - chr8.3:76041579-76041598 None:intergenic 40.0%
GAAGTTATCATGGCAGAAAG+TGG - chr8.3:76041793-76041812 None:intergenic 40.0%
GTGGTTAGAGATCTAATGCT+TGG + chr8.3:76042654-76042673 MS.gene072314:CDS 40.0%
GTTGGACCAATCATACAAAC+TGG + chr8.3:76042096-76042115 MS.gene072314:CDS 40.0%
! GAAACTTGTTCATGCAGTGT+CGG - chr8.3:76041832-76041851 None:intergenic 40.0%
! GAACTTTGGTGGCTAAATAG+AGG - chr8.3:76041418-76041437 None:intergenic 40.0%
! TTTTCCAAGGCAAAATCGTG+TGG - chr8.3:76041607-76041626 None:intergenic 40.0%
!! ACACTTGAGAGTATTGTGTC+GGG + chr8.3:76042498-76042517 MS.gene072314:intron 40.0%
!! TGAAGTGTGACTTGGGATTT+TGG - chr8.3:76042442-76042461 None:intergenic 40.0%
!! TTGTATGTGTGCTTTGGAAG+TGG + chr8.3:76042192-76042211 MS.gene072314:CDS 40.0%
!!! TGACTTGGGATTTTGGTTTG+TGG - chr8.3:76042435-76042454 None:intergenic 40.0%
ATCCCAAGTCACACTTCAAC+CGG + chr8.3:76042444-76042463 MS.gene072314:intron 45.0%
ATCTTCACCAGTGGTAGCAT+TGG + chr8.3:76041696-76041715 MS.gene072314:CDS 45.0%
ATGGGTCCATCTGTTTGAAG+TGG + chr8.3:76042142-76042161 MS.gene072314:CDS 45.0%
ATTAGTAGAGGGGCTTAGAG+TGG + chr8.3:76042575-76042594 MS.gene072314:intron 45.0%
CAAGTAATTTGAGGGTGGCA+GGG - chr8.3:76041525-76041544 None:intergenic 45.0%
CTCCAACCACTTCAAACAGA+TGG - chr8.3:76042151-76042170 None:intergenic 45.0%
GAATGGCATTGCTGAAAGAG+AGG + chr8.3:76042620-76042639 MS.gene072314:CDS 45.0%
GCTTGTGCATTAGCAGAAGA+TGG + chr8.3:76042729-76042748 MS.gene072314:CDS 45.0%
GTCTCTTGCTCATGGTTTCT+TGG + chr8.3:76041990-76042009 MS.gene072314:CDS 45.0%
TACAGTCAAAGCCTTGCAAG+AGG + chr8.3:76042041-76042060 MS.gene072314:CDS 45.0%
TCAACAACCAATGCTACCAC+TGG - chr8.3:76041706-76041725 None:intergenic 45.0%
TCAAGTAATTTGAGGGTGGC+AGG - chr8.3:76041526-76041545 None:intergenic 45.0%
TTAGTAGAGGGGCTTAGAGT+GGG + chr8.3:76042576-76042595 MS.gene072314:intron 45.0%
! ACTGACCTTATTCAGGTTCC+GGG + chr8.3:76041871-76041890 MS.gene072314:CDS 45.0%
! CACTGACCTTATTCAGGTTC+CGG + chr8.3:76041870-76041889 MS.gene072314:CDS 45.0%
! CGTTGCCAATTCGTTTTCCA+AGG - chr8.3:76041620-76041639 None:intergenic 45.0%
! CTTACCACACGATTTTGCCT+TGG + chr8.3:76041600-76041619 MS.gene072314:CDS 45.0%
! GTCCATCTGTTTGAAGTGGT+TGG + chr8.3:76042146-76042165 MS.gene072314:CDS 45.0%
! GTTCTCTCTAAGAACCCATG+TGG - chr8.3:76042378-76042397 None:intergenic 45.0%
! TTTGTTGTGCTCCTCTTGCA+AGG - chr8.3:76042055-76042074 None:intergenic 45.0%
!! CAATGAACTAGCTTTGGGGT+TGG + chr8.3:76042239-76042258 MS.gene072314:CDS 45.0%
!! TATGTGTGCTTTGGAAGTGG+AGG + chr8.3:76042195-76042214 MS.gene072314:CDS 45.0%
AATTTGAGGGTGGCAGGGAT+AGG - chr8.3:76041520-76041539 None:intergenic 50.0%
AGGGATAGGTGCATCAATGG+TGG - chr8.3:76041506-76041525 None:intergenic 50.0%
CCACGAATAGGTAGACAACC+CGG - chr8.3:76041892-76041911 None:intergenic 50.0%
GACAACCCGGAACCTGAATA+AGG - chr8.3:76041879-76041898 None:intergenic 50.0%
GGATAGGTGCATCAATGGTG+GGG - chr8.3:76041504-76041523 None:intergenic 50.0%
GGGATAGGTGCATCAATGGT+GGG - chr8.3:76041505-76041524 None:intergenic 50.0%
! CACCGGTTGAAGTGTGACTT+GGG - chr8.3:76042449-76042468 None:intergenic 50.0%
!! TATTGTGTCGGGAGTGCCAA+TGG + chr8.3:76042509-76042528 MS.gene072314:intron 50.0%
CCAAGTCACACTTCAACCGG+TGG + chr8.3:76042447-76042466 MS.gene072314:intron 55.0%
CCGGGTTGTCTACCTATTCG+TGG + chr8.3:76041889-76041908 MS.gene072314:CDS 55.0%
GGCAGGGATAGGTGCATCAA+TGG - chr8.3:76041509-76041528 None:intergenic 55.0%
GGGAGATCTTGGCCACGAAT+AGG - chr8.3:76041904-76041923 None:intergenic 55.0%
! CCACCGGTTGAAGTGTGACT+TGG - chr8.3:76042450-76042469 None:intergenic 55.0%
!! CGGGAGTGCCAATGGTAACT+TGG + chr8.3:76042517-76042536 MS.gene072314:intron 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 76041379 76042809 76041379 ID=MS.gene072314
chr8.3 mRNA 76041379 76042809 76041379 ID=MS.gene072314.t1;Parent=MS.gene072314
chr8.3 exon 76041379 76042303 76041379 ID=MS.gene072314.t1.exon1;Parent=MS.gene072314.t1
chr8.3 CDS 76041379 76042303 76041379 ID=cds.MS.gene072314.t1;Parent=MS.gene072314.t1
chr8.3 exon 76042580 76042809 76042580 ID=MS.gene072314.t1.exon2;Parent=MS.gene072314.t1
chr8.3 CDS 76042580 76042809 76042580 ID=cds.MS.gene072314.t1;Parent=MS.gene072314.t1
Gene Sequence

>MS.gene072314

ATGGCTAAAGCAACTCATATAGCAGTAGTTTCAATTCCTCTATTTAGCCACCAAAGTTCTATTATTGAGTTTTGCAAGAGACTAACTCATCTCCATCACCACATTCATATCACTTGCATTTTCCCCACCATTGATGCACCTATCCCTGCCACCCTCAAATTACTTGAATCTCTTCCTTCATCCATAAACTACATTTTCCTCCCTCCAATAAACAAACAAGACTTACCACACGATTTTGCCTTGGAAAACGAATTGGCAACGGCTCAATCCATGCCATCTTTTCGCAAATTGCTGTTGTCCTTGTGTTCAACTTCAATATCTTCACCAGTGGTAGCATTGGTTGTTGATCCTTTTGCAAGTCAAGCATTAGAAATAGCAAAAGACATGAACCTCTTATCTTTTGTATACTTCCCACTTTCTGCCATGATAACTTCATTACACTTGTATTGTCCGACACTGCATGAACAAGTTTCATGTGAATACAAAGATCACACTGACCTTATTCAGGTTCCGGGTTGTCTACCTATTCGTGGCCAAGATCTCCCTCCTGAATTTTTTCATGATCGATCTAGTCCTGCTTATAGGATTTTTCTTCAACATTCCAAGAACTTGTCTCTTGCTCATGGTTTCTTGGTGAATAGTTTCTCAAAATTGGAGCAAAATACAGTCAAAGCCTTGCAAGAGGAGCACAACAAAACCACCAAATTAGTTTATATGGTTGGACCAATCATACAAACTGGTTCAAATAGTAGTGATGAGTCAAATGGGTCCATCTGTTTGAAGTGGTTGGAGAATCAAACACCAAACTCAGTTTTGTATGTGTGCTTTGGAAGTGGAGGAACATTTTCTCAACAACAAATCAATGAACTAGCTTTGGGGTTGGAGTTGAGTAATCAGAAATTCTTGTGGGTTTTGAGAGAACCAAGTAATTCTAAAGATGTAGATTACAAAATTGCTGCAATAGGAAATGATGATAATGACCTATTAAAGTACTTACCACATGGGTTCTTAGAGAGAACCAAAAAACAAGGATTAGTTGTTCTTCTTTGGGCACCACAAACCAAAATCCCAAGTCACACTTCAACCGGTGGATTTTTAACACATTGTGGTTGGAATTCAACACTTGAGAGTATTGTGTCGGGAGTGCCAATGGTAACTTGGCCATTGTTTGGTGATCAAATAATGAATTCTATTTTATTAGTAGAGGGGCTTAGAGTGGGTTTGAAGATAAAATTTAATGAGAATGGCATTGCTGAAAGAGAGGAAATAGCTAAGGTGGTTAGAGATCTAATGCTTGGAGAAGAACATAGTGAGATTCGAAAAAGAATTGAAGAGCTTAAAGATGATGCAGCTTGTGCATTAGCAGAAGATGGGTCCTCTACAAGAGCACTTTTTGAATTCGGTACTCGAGTTGAATACTTTTCGTTATAA

Protein sequence

>MS.gene072314.t1

MAKATHIAVVSIPLFSHQSSIIEFCKRLTHLHHHIHITCIFPTIDAPIPATLKLLESLPSSINYIFLPPINKQDLPHDFALENELATAQSMPSFRKLLLSLCSTSISSPVVALVVDPFASQALEIAKDMNLLSFVYFPLSAMITSLHLYCPTLHEQVSCEYKDHTDLIQVPGCLPIRGQDLPPEFFHDRSSPAYRIFLQHSKNLSLAHGFLVNSFSKLEQNTVKALQEEHNKTTKLVYMVGPIIQTGSNSSDESNGSICLKWLENQTPNSVLYVCFGSGGTFSQQQINELALGLELSNQKFLWVLREPIEGLRVGLKIKFNENGIAEREEIAKVVRDLMLGEEHSEIRKRIEELKDDAACALAEDGSSTRALFEFGTRVEYFSL