Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060675.t1 | RHN74979.1 | 95.6 | 406 | 18 | 0 | 1 | 406 | 1 | 406 | 4.60E-223 | 784.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060675.t1 | O81755 | 44.2 | 339 | 181 | 3 | 72 | 405 | 64 | 399 | 5.5e-76 | 287.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060675.t1 | A0A396J9L9 | 95.6 | 406 | 18 | 0 | 1 | 406 | 1 | 406 | 3.3e-223 | 784.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055412 | MS.gene060675 | 0.812557 | 3.99E-51 | -1.69E-46 |
MS.gene060675 | MS.gene061150 | 0.805226 | 1.48E-49 | -1.69E-46 |
MS.gene060675 | MS.gene061819 | 0.816153 | 6.41E-52 | -1.69E-46 |
MS.gene060675 | MS.gene063072 | 0.820816 | 5.61E-53 | -1.69E-46 |
MS.gene060675 | MS.gene063077 | 0.816488 | 5.39E-52 | -1.69E-46 |
MS.gene060675 | MS.gene068688 | 0.800357 | 1.50E-48 | -1.69E-46 |
MS.gene060675 | MS.gene072314 | 0.815078 | 1.11E-51 | -1.69E-46 |
MS.gene060675 | MS.gene072757 | 0.80112 | 1.05E-48 | -1.69E-46 |
MS.gene060675 | MS.gene073090 | 0.807294 | 5.42E-50 | -1.69E-46 |
MS.gene060675 | MS.gene20225 | 0.837293 | 5.66E-57 | -1.69E-46 |
MS.gene060675 | MS.gene21530 | 0.810518 | 1.11E-50 | -1.69E-46 |
MS.gene060675 | MS.gene21628 | 0.813349 | 2.68E-51 | -1.69E-46 |
MS.gene060675 | MS.gene25785 | 0.801136 | 1.04E-48 | -1.69E-46 |
MS.gene060675 | MS.gene26340 | 0.822252 | 2.62E-53 | -1.69E-46 |
MS.gene060675 | MS.gene32051 | 0.801371 | 9.29E-49 | -1.69E-46 |
MS.gene060675 | MS.gene40534 | 0.820786 | 5.71E-53 | -1.69E-46 |
MS.gene060675 | MS.gene43407 | 0.809255 | 2.07E-50 | -1.69E-46 |
MS.gene060675 | MS.gene43489 | 0.800051 | 1.73E-48 | -1.69E-46 |
MS.gene060675 | MS.gene46952 | 0.805759 | 1.14E-49 | -1.69E-46 |
MS.gene060675 | MS.gene47835 | 0.815875 | 7.39E-52 | -1.69E-46 |
MS.gene060675 | MS.gene49765 | 0.830283 | 3.20E-55 | -1.69E-46 |
MS.gene060675 | MS.gene53150 | 0.812451 | 4.21E-51 | -1.69E-46 |
MS.gene060675 | MS.gene55815 | 0.802492 | 5.47E-49 | -1.69E-46 |
MS.gene060675 | MS.gene58071 | 0.828327 | 9.56E-55 | -1.69E-46 |
MS.gene060675 | MS.gene58210 | 0.802897 | 4.51E-49 | -1.69E-46 |
MS.gene060675 | MS.gene63787 | 0.822417 | 2.40E-53 | -1.69E-46 |
MS.gene060675 | MS.gene64487 | 0.810287 | 1.24E-50 | -1.69E-46 |
MS.gene060675 | MS.gene65924 | 0.827334 | 1.66E-54 | -1.69E-46 |
MS.gene060675 | MS.gene73087 | 0.801729 | 7.85E-49 | -1.69E-46 |
MS.gene060675 | MS.gene78945 | 0.808391 | 3.17E-50 | -1.69E-46 |
MS.gene060675 | MS.gene80138 | 0.805172 | 1.52E-49 | -1.69E-46 |
MS.gene060675 | MS.gene87159 | 0.808886 | 2.48E-50 | -1.69E-46 |
MS.gene060675 | MS.gene87271 | 0.813446 | 2.55E-51 | -1.69E-46 |
MS.gene060675 | MS.gene88639 | 0.814671 | 1.37E-51 | -1.69E-46 |
MS.gene060675 | MS.gene92366 | 0.812554 | 4.00E-51 | -1.69E-46 |
MS.gene060675 | MS.gene92871 | 0.800074 | 1.71E-48 | -1.69E-46 |
MS.gene060675 | MS.gene96775 | 0.80112 | 1.05E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060675.t1 | MTR_2g077990 | 95.813 | 406 | 16 | 1 | 1 | 406 | 1 | 405 | 0.0 | 776 |
MS.gene060675.t1 | MTR_2g078610 | 95.320 | 406 | 18 | 1 | 1 | 406 | 1 | 405 | 0.0 | 768 |
MS.gene060675.t1 | MTR_2g078280 | 95.420 | 393 | 17 | 1 | 1 | 393 | 1 | 392 | 0.0 | 748 |
MS.gene060675.t1 | MTR_2g067440 | 84.236 | 406 | 44 | 4 | 1 | 406 | 1 | 386 | 0.0 | 696 |
MS.gene060675.t1 | MTR_2g067450 | 80.236 | 339 | 35 | 3 | 68 | 406 | 3 | 309 | 0.0 | 552 |
MS.gene060675.t1 | MTR_2g078560 | 93.333 | 225 | 15 | 0 | 182 | 406 | 95 | 319 | 8.46e-153 | 444 |
MS.gene060675.t1 | MTR_2g077980 | 74.377 | 281 | 60 | 4 | 135 | 406 | 6 | 283 | 4.04e-138 | 405 |
MS.gene060675.t1 | MTR_2g078540 | 68.379 | 253 | 17 | 3 | 461 | 665 | 34 | 271 | 3.86e-91 | 284 |
MS.gene060675.t1 | MTR_0147s0010 | 45.482 | 332 | 153 | 6 | 76 | 406 | 77 | 381 | 2.09e-82 | 265 |
MS.gene060675.t1 | MTR_4g114210 | 38.757 | 338 | 167 | 5 | 74 | 407 | 19 | 320 | 1.28e-70 | 232 |
MS.gene060675.t1 | MTR_2g008710 | 39.706 | 340 | 162 | 6 | 73 | 407 | 24 | 325 | 5.31e-70 | 231 |
MS.gene060675.t1 | MTR_7g093370 | 37.910 | 335 | 173 | 6 | 76 | 407 | 69 | 371 | 4.55e-68 | 227 |
MS.gene060675.t1 | MTR_2g040000 | 37.994 | 329 | 165 | 5 | 80 | 403 | 33 | 327 | 1.58e-67 | 224 |
MS.gene060675.t1 | MTR_4g125940 | 37.363 | 364 | 182 | 9 | 45 | 403 | 3 | 325 | 3.74e-67 | 223 |
MS.gene060675.t1 | MTR_1g054205 | 36.873 | 339 | 177 | 7 | 74 | 407 | 20 | 326 | 1.95e-66 | 221 |
MS.gene060675.t1 | MTR_4g029200 | 40.000 | 335 | 160 | 6 | 74 | 407 | 44 | 338 | 3.29e-66 | 221 |
MS.gene060675.t1 | MTR_7g086870 | 37.982 | 337 | 163 | 8 | 75 | 411 | 21 | 311 | 1.32e-64 | 216 |
MS.gene060675.t1 | MTR_1g115900 | 39.157 | 332 | 161 | 8 | 74 | 403 | 25 | 317 | 1.56e-64 | 216 |
MS.gene060675.t1 | MTR_3g094650 | 36.826 | 334 | 166 | 7 | 76 | 405 | 28 | 320 | 1.87e-64 | 216 |
MS.gene060675.t1 | MTR_2g099175 | 35.817 | 349 | 183 | 7 | 55 | 403 | 24 | 331 | 5.13e-64 | 215 |
MS.gene060675.t1 | MTR_2g437770 | 37.273 | 330 | 165 | 6 | 76 | 404 | 50 | 338 | 7.10e-64 | 215 |
MS.gene060675.t1 | MTR_5g021060 | 36.070 | 341 | 183 | 6 | 69 | 407 | 23 | 330 | 8.38e-64 | 214 |
MS.gene060675.t1 | MTR_7g107520 | 36.905 | 336 | 174 | 6 | 70 | 404 | 19 | 317 | 8.68e-64 | 214 |
MS.gene060675.t1 | MTR_8g076820 | 36.443 | 343 | 182 | 7 | 63 | 403 | 18 | 326 | 3.01e-63 | 213 |
MS.gene060675.t1 | MTR_2g088770 | 37.048 | 332 | 175 | 5 | 74 | 404 | 24 | 322 | 4.87e-63 | 212 |
MS.gene060675.t1 | MTR_2g084110 | 36.778 | 329 | 167 | 7 | 76 | 403 | 25 | 313 | 2.88e-62 | 210 |
MS.gene060675.t1 | MTR_4g133800 | 37.576 | 330 | 165 | 7 | 81 | 409 | 46 | 335 | 5.41e-62 | 210 |
MS.gene060675.t1 | MTR_3g466200 | 36.607 | 336 | 173 | 7 | 74 | 407 | 23 | 320 | 8.00e-62 | 209 |
MS.gene060675.t1 | MTR_2g084080 | 36.778 | 329 | 167 | 7 | 76 | 403 | 25 | 313 | 1.31e-61 | 208 |
MS.gene060675.t1 | MTR_4g029190 | 39.286 | 336 | 164 | 9 | 74 | 407 | 43 | 340 | 1.94e-61 | 208 |
MS.gene060675.t1 | MTR_7g072480 | 37.160 | 331 | 167 | 7 | 74 | 403 | 22 | 312 | 2.66e-61 | 207 |
MS.gene060675.t1 | MTR_2g084090 | 36.810 | 326 | 166 | 6 | 79 | 403 | 28 | 314 | 6.82e-61 | 206 |
MS.gene060675.t1 | MTR_4g125940 | 39.274 | 303 | 144 | 7 | 106 | 403 | 3 | 270 | 1.04e-60 | 204 |
MS.gene060675.t1 | MTR_2g029800 | 33.983 | 359 | 193 | 8 | 50 | 404 | 9 | 327 | 2.05e-60 | 206 |
MS.gene060675.t1 | MTR_5g017860 | 36.858 | 331 | 175 | 6 | 74 | 403 | 25 | 322 | 2.39e-60 | 205 |
MS.gene060675.t1 | MTR_7g086820 | 35.000 | 340 | 174 | 7 | 74 | 411 | 18 | 312 | 2.48e-60 | 205 |
MS.gene060675.t1 | MTR_4g046713 | 36.747 | 332 | 176 | 6 | 74 | 404 | 25 | 323 | 2.94e-60 | 205 |
MS.gene060675.t1 | MTR_2g084010 | 36.697 | 327 | 165 | 7 | 79 | 403 | 28 | 314 | 6.95e-60 | 204 |
MS.gene060675.t1 | MTR_0155s0040 | 35.030 | 334 | 170 | 7 | 76 | 407 | 27 | 315 | 9.74e-60 | 203 |
MS.gene060675.t1 | MTR_2g029730 | 37.195 | 328 | 170 | 7 | 80 | 404 | 29 | 323 | 1.21e-59 | 204 |
MS.gene060675.t1 | MTR_6g027440 | 37.791 | 344 | 170 | 7 | 74 | 416 | 19 | 319 | 1.54e-59 | 202 |
MS.gene060675.t1 | MTR_7g072510 | 35.258 | 329 | 172 | 6 | 76 | 403 | 20 | 308 | 1.70e-59 | 202 |
MS.gene060675.t1 | MTR_5g017850 | 35.347 | 331 | 180 | 6 | 74 | 403 | 25 | 322 | 2.48e-59 | 202 |
MS.gene060675.t1 | MTR_2g029820 | 34.561 | 353 | 189 | 7 | 55 | 404 | 14 | 327 | 4.15e-59 | 202 |
MS.gene060675.t1 | MTR_5g074970 | 36.826 | 334 | 172 | 7 | 74 | 405 | 28 | 324 | 6.55e-59 | 201 |
MS.gene060675.t1 | MTR_2g029750 | 34.247 | 365 | 198 | 7 | 43 | 404 | 2 | 327 | 7.34e-59 | 202 |
MS.gene060675.t1 | MTR_2g029815 | 36.607 | 336 | 175 | 8 | 74 | 404 | 25 | 327 | 7.95e-59 | 202 |
MS.gene060675.t1 | MTR_1g025980 | 36.254 | 331 | 174 | 8 | 73 | 403 | 21 | 314 | 8.67e-59 | 201 |
MS.gene060675.t1 | MTR_3g094670 | 36.556 | 331 | 171 | 6 | 76 | 405 | 28 | 320 | 9.92e-59 | 201 |
MS.gene060675.t1 | MTR_2g029830 | 35.061 | 328 | 177 | 6 | 80 | 404 | 32 | 326 | 1.05e-58 | 202 |
MS.gene060675.t1 | MTR_5g022870 | 35.503 | 338 | 180 | 6 | 70 | 407 | 17 | 316 | 1.20e-58 | 200 |
MS.gene060675.t1 | MTR_1g090760 | 34.626 | 361 | 198 | 6 | 51 | 409 | 8 | 332 | 1.57e-58 | 201 |
MS.gene060675.t1 | MTR_1g101830 | 35.530 | 349 | 186 | 8 | 58 | 403 | 6 | 318 | 1.96e-58 | 200 |
MS.gene060675.t1 | MTR_2g029850 | 34.521 | 365 | 197 | 7 | 43 | 404 | 2 | 327 | 3.10e-58 | 200 |
MS.gene060675.t1 | MTR_2g029740 | 33.795 | 361 | 197 | 7 | 50 | 407 | 9 | 330 | 3.69e-58 | 200 |
MS.gene060675.t1 | MTR_5g083860 | 35.045 | 331 | 176 | 6 | 74 | 403 | 29 | 321 | 4.87e-58 | 199 |
MS.gene060675.t1 | MTR_2g084020 | 35.758 | 330 | 170 | 7 | 76 | 403 | 25 | 314 | 1.06e-57 | 198 |
MS.gene060675.t1 | MTR_2g028980 | 35.671 | 328 | 175 | 6 | 80 | 404 | 33 | 327 | 1.21e-57 | 199 |
MS.gene060675.t1 | MTR_1g077000 | 35.241 | 332 | 172 | 8 | 76 | 407 | 39 | 327 | 1.35e-57 | 198 |
MS.gene060675.t1 | MTR_7g026990 | 37.538 | 325 | 161 | 6 | 80 | 403 | 35 | 318 | 1.45e-57 | 197 |
MS.gene060675.t1 | MTR_4g087965 | 35.015 | 337 | 185 | 6 | 75 | 408 | 41 | 346 | 1.65e-57 | 198 |
MS.gene060675.t1 | MTR_2g084000 | 34.940 | 332 | 174 | 7 | 74 | 403 | 24 | 315 | 1.80e-57 | 197 |
MS.gene060675.t1 | MTR_1g066710 | 33.636 | 330 | 184 | 5 | 74 | 403 | 25 | 319 | 4.21e-57 | 196 |
MS.gene060675.t1 | MTR_4g029170 | 37.015 | 335 | 168 | 8 | 74 | 405 | 25 | 319 | 6.84e-57 | 196 |
MS.gene060675.t1 | MTR_4g083710 | 35.417 | 336 | 179 | 8 | 74 | 407 | 25 | 324 | 7.36e-57 | 196 |
MS.gene060675.t1 | MTR_3g072190 | 35.241 | 332 | 176 | 5 | 76 | 407 | 26 | 318 | 7.57e-57 | 196 |
MS.gene060675.t1 | MTR_1g022970 | 39.403 | 335 | 167 | 7 | 76 | 407 | 46 | 347 | 8.27e-57 | 196 |
MS.gene060675.t1 | MTR_7g029030 | 35.030 | 334 | 177 | 5 | 76 | 407 | 25 | 320 | 8.43e-57 | 195 |
MS.gene060675.t1 | MTR_3g466180 | 37.838 | 333 | 166 | 6 | 76 | 407 | 31 | 323 | 1.70e-56 | 195 |
MS.gene060675.t1 | MTR_1g086490 | 36.152 | 343 | 184 | 6 | 74 | 409 | 28 | 342 | 2.04e-56 | 195 |
MS.gene060675.t1 | MTR_5g074860 | 36.795 | 337 | 166 | 10 | 76 | 406 | 29 | 324 | 2.25e-56 | 194 |
MS.gene060675.t1 | MTR_5g014100 | 35.484 | 341 | 180 | 8 | 70 | 403 | 20 | 327 | 2.34e-56 | 194 |
MS.gene060675.t1 | MTR_3g094630 | 36.858 | 331 | 170 | 6 | 76 | 405 | 28 | 320 | 7.74e-56 | 193 |
MS.gene060675.t1 | MTR_4g031140 | 36.254 | 331 | 174 | 6 | 74 | 403 | 26 | 320 | 1.10e-55 | 193 |
MS.gene060675.t1 | MTR_2g029910 | 34.054 | 370 | 203 | 8 | 43 | 409 | 3 | 334 | 1.19e-55 | 193 |
MS.gene060675.t1 | MTR_2g029860 | 34.030 | 335 | 185 | 6 | 76 | 407 | 29 | 330 | 1.27e-55 | 193 |
MS.gene060675.t1 | MTR_4g030890 | 35.952 | 331 | 175 | 6 | 74 | 403 | 98 | 392 | 1.60e-55 | 195 |
MS.gene060675.t1 | MTR_3g092990 | 35.045 | 331 | 182 | 5 | 74 | 403 | 24 | 322 | 1.68e-55 | 192 |
MS.gene060675.t1 | MTR_8g075100 | 33.628 | 339 | 177 | 7 | 70 | 403 | 20 | 315 | 7.42e-55 | 190 |
MS.gene060675.t1 | MTR_2g029560 | 34.139 | 331 | 182 | 6 | 80 | 407 | 28 | 325 | 1.11e-54 | 191 |
MS.gene060675.t1 | MTR_1g038680 | 36.061 | 330 | 179 | 6 | 77 | 404 | 30 | 329 | 1.49e-54 | 190 |
MS.gene060675.t1 | MTR_4g132110 | 32.733 | 333 | 189 | 5 | 72 | 404 | 28 | 325 | 3.81e-54 | 189 |
MS.gene060675.t1 | MTR_6g043460 | 36.061 | 330 | 168 | 6 | 76 | 403 | 36 | 324 | 5.07e-54 | 189 |
MS.gene060675.t1 | MTR_4g029180 | 36.061 | 330 | 168 | 8 | 79 | 405 | 30 | 319 | 6.35e-54 | 187 |
MS.gene060675.t1 | MTR_1g086320 | 34.835 | 333 | 185 | 6 | 74 | 404 | 28 | 330 | 7.10e-54 | 188 |
MS.gene060675.t1 | MTR_5g049280 | 35.608 | 337 | 172 | 11 | 76 | 403 | 33 | 333 | 7.18e-54 | 188 |
MS.gene060675.t1 | MTR_4g122640 | 35.905 | 337 | 179 | 7 | 73 | 407 | 35 | 336 | 9.63e-54 | 187 |
MS.gene060675.t1 | MTR_2g008730 | 35.905 | 337 | 149 | 6 | 73 | 404 | 24 | 298 | 1.15e-53 | 186 |
MS.gene060675.t1 | MTR_8g062780 | 35.843 | 332 | 179 | 5 | 74 | 403 | 21 | 320 | 3.86e-53 | 186 |
MS.gene060675.t1 | MTR_4g074995 | 34.226 | 336 | 170 | 8 | 74 | 407 | 22 | 308 | 7.06e-53 | 184 |
MS.gene060675.t1 | MTR_5g033470 | 33.234 | 337 | 188 | 9 | 72 | 403 | 69 | 373 | 8.31e-53 | 186 |
MS.gene060675.t1 | MTR_4g127670 | 35.329 | 334 | 176 | 6 | 76 | 405 | 24 | 321 | 8.58e-53 | 185 |
MS.gene060675.t1 | MTR_4g132110 | 32.249 | 338 | 189 | 6 | 72 | 404 | 28 | 330 | 3.64e-52 | 184 |
MS.gene060675.t1 | MTR_5g016010 | 32.537 | 335 | 189 | 6 | 74 | 404 | 25 | 326 | 4.83e-52 | 183 |
MS.gene060675.t1 | MTR_1g009750 | 33.333 | 339 | 188 | 6 | 73 | 407 | 24 | 328 | 4.83e-52 | 183 |
MS.gene060675.t1 | MTR_1g066640 | 32.024 | 331 | 188 | 5 | 74 | 403 | 25 | 319 | 5.69e-52 | 182 |
MS.gene060675.t1 | MTR_5g074740 | 35.673 | 342 | 173 | 10 | 74 | 409 | 23 | 323 | 9.85e-52 | 182 |
MS.gene060675.t1 | MTR_5g074710 | 34.795 | 342 | 176 | 10 | 74 | 409 | 23 | 323 | 1.54e-51 | 181 |
MS.gene060675.t1 | MTR_2g008160 | 33.433 | 335 | 183 | 7 | 74 | 404 | 22 | 320 | 1.67e-51 | 181 |
MS.gene060675.t1 | MTR_5g074760 | 35.000 | 340 | 174 | 10 | 74 | 407 | 23 | 321 | 3.82e-51 | 180 |
MS.gene060675.t1 | MTR_3g467600 | 34.688 | 369 | 188 | 13 | 46 | 407 | 2 | 324 | 4.81e-51 | 180 |
MS.gene060675.t1 | MTR_6g043280 | 32.326 | 331 | 180 | 7 | 76 | 404 | 41 | 329 | 5.50e-51 | 180 |
MS.gene060675.t1 | MTR_1g066380 | 31.420 | 331 | 190 | 5 | 74 | 403 | 25 | 319 | 6.51e-51 | 179 |
MS.gene060675.t1 | MTR_4g132490 | 33.811 | 349 | 189 | 7 | 62 | 407 | 18 | 327 | 1.57e-50 | 179 |
MS.gene060675.t1 | MTR_4g074990 | 34.030 | 335 | 169 | 9 | 74 | 407 | 22 | 305 | 3.19e-50 | 177 |
MS.gene060675.t1 | MTR_6g043240 | 31.928 | 332 | 184 | 6 | 76 | 407 | 42 | 331 | 1.47e-49 | 177 |
MS.gene060675.t1 | MTR_1g066680 | 32.121 | 330 | 188 | 7 | 74 | 403 | 25 | 318 | 1.01e-48 | 174 |
MS.gene060675.t1 | MTR_4g074980 | 32.537 | 335 | 162 | 8 | 74 | 407 | 23 | 294 | 1.81e-47 | 169 |
MS.gene060675.t1 | MTR_2g029830 | 34.495 | 287 | 152 | 6 | 121 | 404 | 5 | 258 | 1.58e-45 | 164 |
MS.gene060675.t1 | MTR_3g092990 | 32.931 | 331 | 178 | 6 | 74 | 403 | 24 | 311 | 2.31e-45 | 164 |
MS.gene060675.t1 | MTR_4g095450 | 32.641 | 337 | 185 | 7 | 74 | 406 | 25 | 323 | 3.55e-45 | 164 |
MS.gene060675.t1 | MTR_3g072190 | 34.256 | 289 | 151 | 5 | 119 | 407 | 2 | 251 | 9.71e-45 | 160 |
MS.gene060675.t1 | MTR_4g074980 | 39.535 | 215 | 121 | 3 | 74 | 287 | 23 | 229 | 6.17e-44 | 158 |
MS.gene060675.t1 | MTR_3g105790 | 31.563 | 339 | 192 | 7 | 74 | 409 | 23 | 324 | 8.48e-44 | 160 |
MS.gene060675.t1 | MTR_0286s0010 | 32.641 | 337 | 190 | 8 | 74 | 407 | 32 | 334 | 8.97e-44 | 160 |
MS.gene060675.t1 | MTR_6g008075 | 32.641 | 337 | 190 | 8 | 74 | 407 | 32 | 334 | 8.97e-44 | 160 |
MS.gene060675.t1 | MTR_1g009750 | 29.970 | 337 | 185 | 7 | 73 | 407 | 24 | 311 | 1.71e-40 | 150 |
MS.gene060675.t1 | MTR_2g008160 | 30.448 | 335 | 158 | 8 | 74 | 404 | 22 | 285 | 2.30e-36 | 138 |
MS.gene060675.t1 | MTR_2g008160 | 41.420 | 169 | 94 | 3 | 74 | 242 | 22 | 185 | 7.03e-35 | 131 |
MS.gene060675.t1 | MTR_1g066380 | 29.474 | 285 | 164 | 5 | 120 | 403 | 3 | 251 | 1.46e-34 | 132 |
MS.gene060675.t1 | MTR_5g074860 | 43.678 | 174 | 91 | 5 | 76 | 245 | 29 | 199 | 3.26e-33 | 129 |
MS.gene060675.t1 | MTR_3g072260 | 50.427 | 117 | 56 | 2 | 72 | 187 | 21 | 136 | 2.00e-28 | 111 |
MS.gene060675.t1 | MTR_5g074700 | 31.203 | 266 | 129 | 8 | 147 | 409 | 2 | 216 | 5.76e-27 | 109 |
MS.gene060675.t1 | MTR_2g067350 | 82.540 | 63 | 9 | 1 | 346 | 406 | 12 | 74 | 6.34e-27 | 104 |
MS.gene060675.t1 | MTR_3g105790 | 28.986 | 276 | 162 | 6 | 137 | 409 | 4 | 248 | 2.16e-25 | 105 |
MS.gene060675.t1 | MTR_2g029880 | 30.045 | 223 | 113 | 3 | 189 | 409 | 9 | 190 | 6.61e-24 | 100 |
MS.gene060675.t1 | MTR_6g048160 | 56.944 | 72 | 26 | 1 | 115 | 186 | 22 | 88 | 9.24e-22 | 90.5 |
MS.gene060675.t1 | MTR_1g089005 | 42.276 | 123 | 67 | 1 | 70 | 188 | 9 | 131 | 4.10e-21 | 90.9 |
MS.gene060675.t1 | MTR_2g067310 | 81.481 | 54 | 10 | 0 | 346 | 399 | 8 | 61 | 9.27e-21 | 92.4 |
MS.gene060675.t1 | MTR_6g042030 | 45.098 | 102 | 53 | 1 | 512 | 613 | 69 | 167 | 7.93e-20 | 90.1 |
MS.gene060675.t1 | MTR_7g072490 | 51.064 | 94 | 43 | 2 | 122 | 214 | 2 | 93 | 8.51e-20 | 88.6 |
MS.gene060675.t1 | MTR_7g086790 | 41.322 | 121 | 66 | 2 | 123 | 243 | 17 | 132 | 1.09e-18 | 85.1 |
MS.gene060675.t1 | MTR_4g114220 | 51.899 | 79 | 27 | 2 | 108 | 186 | 35 | 102 | 2.31e-18 | 82.4 |
MS.gene060675.t1 | MTR_4g012865 | 61.404 | 57 | 22 | 0 | 76 | 132 | 77 | 133 | 3.06e-18 | 82.4 |
MS.gene060675.t1 | MTR_0147s0040 | 47.436 | 78 | 40 | 1 | 329 | 406 | 6 | 82 | 1.02e-14 | 70.1 |
MS.gene060675.t1 | MTR_2g067360 | 64.615 | 65 | 19 | 3 | 271 | 335 | 33 | 93 | 9.80e-14 | 67.8 |
MS.gene060675.t1 | MTR_7g086810 | 33.613 | 119 | 52 | 1 | 76 | 194 | 6 | 97 | 3.26e-13 | 70.1 |
MS.gene060675.t1 | MTR_7g086785 | 47.368 | 76 | 38 | 2 | 121 | 196 | 3 | 76 | 1.45e-12 | 65.9 |
MS.gene060675.t1 | MTR_6g071110 | 38.043 | 92 | 45 | 2 | 144 | 235 | 80 | 159 | 2.16e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060675.t1 | AT4G33870 | 44.248 | 339 | 181 | 3 | 72 | 405 | 64 | 399 | 3.29e-93 | 294 |
MS.gene060675.t1 | AT1G49570 | 38.920 | 352 | 174 | 7 | 61 | 403 | 27 | 346 | 2.57e-72 | 238 |
MS.gene060675.t1 | AT4G36430 | 39.169 | 337 | 170 | 6 | 73 | 407 | 27 | 330 | 4.54e-71 | 234 |
MS.gene060675.t1 | AT5G17820 | 36.236 | 356 | 178 | 6 | 52 | 407 | 7 | 313 | 8.20e-69 | 227 |
MS.gene060675.t1 | AT5G64120 | 39.104 | 335 | 164 | 7 | 74 | 407 | 33 | 328 | 1.19e-68 | 227 |
MS.gene060675.t1 | AT5G17820 | 33.990 | 406 | 209 | 9 | 7 | 407 | 15 | 366 | 1.75e-68 | 228 |
MS.gene060675.t1 | AT2G38380 | 37.363 | 364 | 186 | 8 | 44 | 403 | 4 | 329 | 2.98e-67 | 224 |
MS.gene060675.t1 | AT5G06720 | 37.313 | 335 | 174 | 6 | 76 | 407 | 32 | 333 | 4.87e-67 | 223 |
MS.gene060675.t1 | AT2G41480 | 38.393 | 336 | 167 | 5 | 76 | 407 | 29 | 328 | 2.12e-65 | 219 |
MS.gene060675.t1 | AT5G15180 | 36.145 | 332 | 178 | 3 | 76 | 407 | 32 | 329 | 3.38e-65 | 218 |
MS.gene060675.t1 | AT2G38390 | 35.989 | 364 | 191 | 8 | 44 | 403 | 4 | 329 | 3.76e-65 | 219 |
MS.gene060675.t1 | AT2G35380 | 39.403 | 335 | 169 | 9 | 73 | 403 | 27 | 331 | 4.02e-65 | 218 |
MS.gene060675.t1 | AT3G50990 | 36.061 | 330 | 176 | 6 | 80 | 407 | 45 | 341 | 5.79e-65 | 218 |
MS.gene060675.t1 | AT2G18150 | 36.982 | 338 | 178 | 6 | 72 | 407 | 32 | 336 | 8.04e-65 | 218 |
MS.gene060675.t1 | AT1G05240 | 35.542 | 332 | 176 | 5 | 76 | 404 | 26 | 322 | 3.79e-64 | 215 |
MS.gene060675.t1 | AT1G05250 | 35.542 | 332 | 176 | 5 | 76 | 404 | 26 | 322 | 3.79e-64 | 215 |
MS.gene060675.t1 | AT2G43480 | 36.228 | 334 | 178 | 6 | 76 | 407 | 35 | 335 | 5.50e-64 | 215 |
MS.gene060675.t1 | AT3G03670 | 35.311 | 354 | 187 | 6 | 51 | 403 | 5 | 317 | 2.27e-63 | 213 |
MS.gene060675.t1 | AT4G08770 | 38.279 | 337 | 166 | 8 | 74 | 403 | 22 | 323 | 6.67e-63 | 213 |
MS.gene060675.t1 | AT4G08780 | 37.092 | 337 | 170 | 8 | 74 | 403 | 22 | 323 | 2.14e-62 | 211 |
MS.gene060675.t1 | AT1G05260 | 36.747 | 332 | 176 | 5 | 74 | 404 | 24 | 322 | 2.61e-62 | 210 |
MS.gene060675.t1 | AT2G18140 | 36.716 | 335 | 177 | 6 | 75 | 407 | 34 | 335 | 5.13e-62 | 210 |
MS.gene060675.t1 | AT1G44970 | 39.339 | 333 | 166 | 6 | 74 | 403 | 43 | 342 | 5.83e-61 | 207 |
MS.gene060675.t1 | AT3G01190 | 36.585 | 328 | 172 | 4 | 76 | 403 | 26 | 317 | 7.78e-61 | 206 |
MS.gene060675.t1 | AT5G05340 | 35.736 | 333 | 175 | 6 | 76 | 407 | 30 | 324 | 8.39e-61 | 206 |
MS.gene060675.t1 | AT3G21770 | 36.858 | 331 | 177 | 4 | 74 | 404 | 27 | 325 | 1.14e-60 | 206 |
MS.gene060675.t1 | AT4G16270 | 36.413 | 368 | 182 | 12 | 56 | 407 | 17 | 348 | 1.90e-60 | 206 |
MS.gene060675.t1 | AT5G06730 | 35.329 | 334 | 182 | 4 | 76 | 407 | 33 | 334 | 3.08e-60 | 206 |
MS.gene060675.t1 | AT5G19890 | 37.313 | 335 | 166 | 10 | 74 | 403 | 28 | 323 | 8.45e-60 | 204 |
MS.gene060675.t1 | AT4G25980 | 36.310 | 336 | 173 | 7 | 74 | 404 | 24 | 323 | 9.92e-60 | 203 |
MS.gene060675.t1 | AT5G24070 | 34.242 | 330 | 182 | 7 | 76 | 403 | 35 | 331 | 1.41e-59 | 204 |
MS.gene060675.t1 | AT5G66390 | 35.294 | 340 | 185 | 7 | 73 | 410 | 30 | 336 | 3.73e-59 | 202 |
MS.gene060675.t1 | AT5G42180 | 35.119 | 336 | 179 | 6 | 72 | 406 | 19 | 316 | 8.13e-59 | 201 |
MS.gene060675.t1 | AT1G30870 | 35.843 | 332 | 172 | 5 | 76 | 405 | 51 | 343 | 1.14e-58 | 201 |
MS.gene060675.t1 | AT5G39580 | 36.607 | 336 | 174 | 7 | 73 | 407 | 22 | 319 | 1.62e-58 | 200 |
MS.gene060675.t1 | AT5G51890 | 35.168 | 327 | 177 | 6 | 76 | 402 | 26 | 317 | 5.37e-58 | 199 |
MS.gene060675.t1 | AT4G11290 | 34.441 | 331 | 187 | 3 | 74 | 404 | 23 | 323 | 5.59e-58 | 199 |
MS.gene060675.t1 | AT2G39040 | 37.609 | 343 | 176 | 9 | 68 | 403 | 35 | 346 | 9.46e-58 | 199 |
MS.gene060675.t1 | AT4G30170 | 34.226 | 336 | 184 | 4 | 74 | 407 | 25 | 325 | 1.69e-57 | 197 |
MS.gene060675.t1 | AT5G58390 | 37.725 | 334 | 168 | 7 | 74 | 405 | 19 | 314 | 4.39e-57 | 196 |
MS.gene060675.t1 | AT2G22420 | 35.542 | 332 | 177 | 6 | 73 | 403 | 20 | 315 | 5.87e-57 | 196 |
MS.gene060675.t1 | AT1G68850 | 35.030 | 334 | 179 | 9 | 76 | 403 | 30 | 331 | 6.55e-57 | 196 |
MS.gene060675.t1 | AT4G21960 | 34.954 | 329 | 179 | 5 | 76 | 404 | 31 | 324 | 7.80e-57 | 196 |
MS.gene060675.t1 | AT1G71695 | 35.227 | 352 | 182 | 8 | 60 | 404 | 24 | 336 | 1.05e-56 | 196 |
MS.gene060675.t1 | AT5G58400 | 36.527 | 334 | 172 | 7 | 74 | 405 | 28 | 323 | 1.07e-56 | 195 |
MS.gene060675.t1 | AT5G64110 | 36.061 | 330 | 172 | 6 | 80 | 407 | 38 | 330 | 1.12e-56 | 196 |
MS.gene060675.t1 | AT1G14550 | 36.228 | 334 | 171 | 8 | 74 | 404 | 24 | 318 | 1.40e-56 | 195 |
MS.gene060675.t1 | AT4G26010 | 36.283 | 339 | 166 | 10 | 74 | 411 | 20 | 309 | 4.21e-56 | 193 |
MS.gene060675.t1 | AT3G49110 | 36.571 | 350 | 178 | 8 | 74 | 412 | 31 | 347 | 4.32e-56 | 194 |
MS.gene060675.t1 | AT4G33420 | 34.930 | 355 | 177 | 9 | 55 | 407 | 23 | 325 | 4.80e-56 | 194 |
MS.gene060675.t1 | AT3G49120 | 36.752 | 351 | 178 | 8 | 73 | 412 | 29 | 346 | 5.90e-56 | 194 |
MS.gene060675.t1 | AT4G26010 | 36.283 | 339 | 166 | 11 | 74 | 411 | 48 | 337 | 8.08e-56 | 193 |
MS.gene060675.t1 | AT2G18980 | 34.524 | 336 | 183 | 5 | 74 | 407 | 23 | 323 | 1.16e-55 | 192 |
MS.gene060675.t1 | AT3G32980 | 36.286 | 350 | 179 | 8 | 74 | 412 | 29 | 345 | 1.42e-55 | 193 |
MS.gene060675.t1 | AT4G33420 | 34.930 | 355 | 177 | 9 | 55 | 407 | 70 | 372 | 1.56e-55 | 194 |
MS.gene060675.t1 | AT5G22410 | 34.441 | 331 | 177 | 7 | 76 | 403 | 28 | 321 | 1.47e-54 | 190 |
MS.gene060675.t1 | AT5G19880 | 33.728 | 338 | 189 | 6 | 74 | 407 | 23 | 329 | 1.49e-54 | 190 |
MS.gene060675.t1 | AT5G64100 | 33.333 | 333 | 181 | 5 | 77 | 407 | 38 | 331 | 5.18e-54 | 188 |
MS.gene060675.t1 | AT2G37130 | 32.219 | 329 | 187 | 6 | 76 | 403 | 30 | 323 | 1.95e-53 | 187 |
MS.gene060675.t1 | AT2G37130 | 32.209 | 326 | 185 | 6 | 79 | 403 | 2 | 292 | 6.30e-53 | 184 |
MS.gene060675.t1 | AT2G34060 | 32.738 | 336 | 193 | 5 | 71 | 403 | 37 | 342 | 1.62e-52 | 185 |
MS.gene060675.t1 | AT5G14130 | 33.140 | 344 | 193 | 5 | 66 | 407 | 22 | 330 | 2.83e-52 | 184 |
MS.gene060675.t1 | AT5G14130 | 33.431 | 341 | 190 | 5 | 66 | 404 | 63 | 368 | 5.39e-52 | 184 |
MS.gene060675.t1 | AT1G77100 | 33.731 | 335 | 178 | 8 | 74 | 404 | 22 | 316 | 1.28e-51 | 181 |
MS.gene060675.t1 | AT3G17070 | 31.135 | 379 | 214 | 8 | 33 | 406 | 2 | 338 | 1.55e-51 | 182 |
MS.gene060675.t1 | AT4G37520 | 32.934 | 334 | 187 | 6 | 74 | 403 | 25 | 325 | 1.65e-51 | 181 |
MS.gene060675.t1 | AT4G17690 | 34.925 | 335 | 179 | 7 | 75 | 407 | 25 | 322 | 3.69e-51 | 180 |
MS.gene060675.t1 | AT4G37530 | 32.424 | 330 | 190 | 4 | 76 | 403 | 27 | 325 | 6.06e-51 | 180 |
MS.gene060675.t1 | AT1G14540 | 33.929 | 336 | 181 | 7 | 74 | 407 | 19 | 315 | 2.34e-49 | 175 |
MS.gene060675.t1 | AT4G37520 | 32.335 | 334 | 186 | 7 | 74 | 403 | 25 | 322 | 3.54e-49 | 175 |
MS.gene060675.t1 | AT5G47000 | 34.024 | 338 | 185 | 6 | 72 | 407 | 29 | 330 | 5.18e-49 | 175 |
MS.gene060675.t1 | AT5G40150 | 35.417 | 336 | 178 | 8 | 74 | 407 | 30 | 328 | 2.74e-48 | 172 |
MS.gene060675.t1 | AT1G34510 | 31.231 | 333 | 179 | 7 | 74 | 403 | 20 | 305 | 6.13e-48 | 171 |
MS.gene060675.t1 | AT3G28200 | 32.738 | 336 | 186 | 7 | 74 | 407 | 19 | 316 | 7.55e-48 | 171 |
MS.gene060675.t1 | AT2G24800 | 32.249 | 338 | 188 | 6 | 74 | 407 | 29 | 329 | 1.74e-47 | 171 |
MS.gene060675.t1 | AT4G31760 | 33.828 | 337 | 183 | 6 | 74 | 407 | 27 | 326 | 9.60e-47 | 168 |
MS.gene060675.t1 | AT2G35380 | 37.687 | 268 | 135 | 8 | 140 | 403 | 4 | 243 | 1.53e-45 | 162 |
MS.gene060675.t1 | AT1G24110 | 31.737 | 334 | 193 | 6 | 74 | 405 | 20 | 320 | 1.12e-43 | 160 |
MS.gene060675.t1 | AT4G37530 | 32.292 | 288 | 163 | 3 | 74 | 359 | 25 | 282 | 2.55e-43 | 157 |
MS.gene060675.t1 | AT3G49960 | 30.539 | 334 | 195 | 6 | 74 | 403 | 25 | 325 | 3.08e-43 | 159 |
MS.gene060675.t1 | AT5G67400 | 30.240 | 334 | 196 | 6 | 74 | 403 | 25 | 325 | 1.03e-41 | 154 |
MS.gene060675.t1 | AT4G25980 | 44.444 | 171 | 90 | 3 | 74 | 244 | 69 | 234 | 3.67e-38 | 143 |
MS.gene060675.t1 | AT3G17070 | 31.973 | 294 | 159 | 8 | 118 | 406 | 18 | 275 | 3.53e-36 | 137 |
MS.gene060675.t1 | AT5G39580 | 41.209 | 182 | 101 | 2 | 73 | 254 | 22 | 197 | 6.32e-36 | 135 |
MS.gene060675.t1 | AT2G24800 | 40.828 | 169 | 95 | 1 | 74 | 242 | 29 | 192 | 4.94e-34 | 130 |
MS.gene060675.t1 | AT3G15110 | 56.098 | 123 | 47 | 2 | 499 | 614 | 57 | 179 | 1.32e-31 | 124 |
MS.gene060675.t1 | AT3G42570 | 36.538 | 104 | 65 | 1 | 140 | 242 | 44 | 147 | 4.39e-15 | 73.6 |
Find 148 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCCAAATCAAACATTAAA+AGG | 0.190816 | 2.2:+16144916 | MS.gene060675:CDS |
TCTTTCTCTCATACTTCTTT+TGG | 0.201960 | 2.2:+16144451 | MS.gene060675:CDS |
CACAAGAGATTCCGTTCTTT+TGG | 0.253148 | 2.2:+16145023 | MS.gene060675:CDS |
TGACAAAGTTGACTTGATTA+AGG | 0.286349 | 2.2:+16144942 | MS.gene060675:CDS |
CTGCACCTCTTCAATCTTAG+AGG | 0.300466 | 2.2:+16145258 | MS.gene060675:CDS |
CTGGTTCAGGTTCTCCTCTT+GGG | 0.310605 | 2.2:-16144396 | None:intergenic |
TCTGGTTCAGGTTCTCCTCT+TGG | 0.320917 | 2.2:-16144397 | None:intergenic |
ATCTTCAATATAATTTCTAT+AGG | 0.325297 | 2.2:+16144539 | MS.gene060675:CDS |
CAAAAGTCACTAACTTTAAC+AGG | 0.331145 | 2.2:+16147712 | MS.gene060675:CDS |
ACCTTACGGTGATTGTTATC+TGG | 0.349282 | 2.2:-16157121 | None:intergenic |
TCTTCAATATAATTTCTATA+GGG | 0.351746 | 2.2:+16144540 | MS.gene060675:CDS |
ATGTGATGCTTCCTTGCTAT+TGG | 0.356236 | 2.2:+16144852 | MS.gene060675:CDS |
CACCTGTTCAAGCATTTCTC+GGG | 0.359534 | 2.2:+16153586 | MS.gene060675:CDS |
CTGTATGACTTTCAAGGAAC+AGG | 0.366588 | 2.2:+16145570 | MS.gene060675:CDS |
TCACCTGTTCAAGCATTTCT+CGG | 0.367357 | 2.2:+16153585 | MS.gene060675:CDS |
AGAGAAGGAGTAGAATCATA+TGG | 0.370898 | 2.2:-16150494 | None:intergenic |
TCTCGTCTGCCTGTTAAAAC+TGG | 0.372361 | 2.2:-16145165 | None:intergenic |
ATATTGTTCTTACTGTTGTC+AGG | 0.387431 | 2.2:-16145648 | None:intergenic |
GGAGGACACTGGCAGCAATT+TGG | 0.393977 | 2.2:-16150547 | None:intergenic |
TTGTCATCTGCAGTGCCATC+TGG | 0.398557 | 2.2:+16145765 | MS.gene060675:CDS |
TACAGGAGATTCAATTGAAA+AGG | 0.399678 | 2.2:+16157325 | MS.gene060675:intron |
ACATGGCCATCGCAGGGTGG+TGG | 0.400559 | 2.2:+16145132 | MS.gene060675:intron |
TCTTCCGCTCCTTCCGCCGC+AGG | 0.403419 | 2.2:+16150594 | MS.gene060675:CDS |
CTAGAGTGATGAAAATTCAT+TGG | 0.406025 | 2.2:-16145711 | None:intergenic |
TGGAATAGCCTGCTTCTCAT+AGG | 0.410027 | 2.2:-16144899 | None:intergenic |
ATAGAAATTATATTGAAGAT+TGG | 0.410764 | 2.2:-16144536 | None:intergenic |
AGATGAAGTTGTTTGTGTTA+TGG | 0.413662 | 2.2:-16144425 | None:intergenic |
CAGAGTTTGTTGAGAGGAAG+AGG | 0.433418 | 2.2:+16145813 | MS.gene060675:CDS |
TGCGGCGGAAGGAGCGGAAG+AGG | 0.437437 | 2.2:-16150592 | None:intergenic |
GAATCTGATCAGTTGCCTCC+TGG | 0.439218 | 2.2:-16145206 | None:intergenic |
TCAAGAGAAGACTGCCAGAT+TGG | 0.442700 | 2.2:+16145866 | MS.gene060675:CDS |
GCCCCGAGAAATGCTTGAAC+AGG | 0.450986 | 2.2:-16153588 | None:intergenic |
ATTGGAGACTTTGAAAGCTA+TGG | 0.451641 | 2.2:+16153527 | MS.gene060675:CDS |
GCTCAGACCCGCCTCGATGA+TGG | 0.451902 | 2.2:-16153655 | None:intergenic |
TTGGAGACTTTGAAAGCTAT+GGG | 0.454281 | 2.2:+16153528 | MS.gene060675:CDS |
TTTCTGAGAGAGAGAAGAAC+AGG | 0.457234 | 2.2:-16144373 | None:intergenic |
CAGATGACGGATCAACCTTT+CGG | 0.458746 | 2.2:+16145904 | MS.gene060675:CDS |
GTCGGTAAAGGAAGAAGCAT+TGG | 0.460490 | 2.2:+16153509 | MS.gene060675:CDS |
ATGAACATGGATGAAGAACT+TGG | 0.467561 | 2.2:+16147661 | MS.gene060675:CDS |
AGAGTTTGTTGAGAGGAAGA+GGG | 0.471781 | 2.2:+16145814 | MS.gene060675:CDS |
CAAAGGCTGTATGACTTTCA+AGG | 0.476822 | 2.2:+16145564 | MS.gene060675:CDS |
TCTATGATCAAAGTAGATAT+CGG | 0.477803 | 2.2:-16144605 | None:intergenic |
CCTGTTAAAACTGGATAGAA+TGG | 0.484594 | 2.2:-16145156 | None:intergenic |
CGGGAAACAGTCACCCTCCT+TGG | 0.485858 | 2.2:+16145291 | MS.gene060675:CDS |
TACGGTGATTGTTATCTGGC+GGG | 0.486528 | 2.2:-16157117 | None:intergenic |
GAAAGAAGGGTCGTCGGTGG+AGG | 0.487888 | 2.2:-16150522 | None:intergenic |
TCTGCTTATGCTTCAGATGA+CGG | 0.489775 | 2.2:+16145891 | MS.gene060675:CDS |
GAGAAGGAGTAGAATCATAT+GGG | 0.494622 | 2.2:-16150493 | None:intergenic |
TCGAGAGGTATACTCGGATC+TGG | 0.496610 | 2.2:-16145597 | None:intergenic |
TGATGCTTCCTTGCTATTGG+AGG | 0.498318 | 2.2:+16144855 | MS.gene060675:CDS |
GAAATCAAATGGAAAAGTAT+TGG | 0.499375 | 2.2:-16144491 | None:intergenic |
GCTGCCAGTGTCCTCCTCAC+CGG | 0.505609 | 2.2:+16150554 | MS.gene060675:CDS |
TTTGACTGGAAATCAAGGTC+AGG | 0.507215 | 2.2:+16145971 | MS.gene060675:CDS |
GAATCATATGGGATTTCAAT+GGG | 0.507790 | 2.2:-16150482 | None:intergenic |
GCAGCAATTTGGATGAAAGA+AGG | 0.509670 | 2.2:-16150536 | None:intergenic |
AGCATAAGCAGAAACCAATC+TGG | 0.517041 | 2.2:-16145880 | None:intergenic |
AGAATCATATGGGATTTCAA+TGG | 0.519315 | 2.2:-16150483 | None:intergenic |
GGCTAAACGTCTCAAACAAA+CGG | 0.521583 | 2.2:+16150616 | MS.gene060675:CDS |
ATGAATGCAACTATGATCCA+TGG | 0.521907 | 2.2:-16144340 | None:intergenic |
TGACTTGATTAAGGAGGAGG+TGG | 0.522484 | 2.2:+16144951 | MS.gene060675:CDS |
CTTCCGCTCCTTCCGCCGCA+GGG | 0.525679 | 2.2:+16150595 | MS.gene060675:CDS |
TTCAGGAGAGAAGTCGGTAA+AGG | 0.526068 | 2.2:+16153497 | MS.gene060675:CDS |
CATGGCCATCGCAGGGTGGT+GGG | 0.528334 | 2.2:+16145133 | MS.gene060675:intron |
GATTCTTCATCTTCAACCCA+TGG | 0.528386 | 2.2:+16144323 | MS.gene060675:CDS |
GAAGGAGCGGAAGAGGAGAA+CGG | 0.530575 | 2.2:-16150585 | None:intergenic |
ATCTTAGAGGATTCAACGCA+CGG | 0.533456 | 2.2:+16145271 | MS.gene060675:CDS |
CAACATCATCATCATTCACA+TGG | 0.537297 | 2.2:+16150414 | MS.gene060675:CDS |
TCCATCTGTTGTGATTGTTG+TGG | 0.537652 | 2.2:-16150450 | None:intergenic |
AGTTGACTTGATTAAGGAGG+AGG | 0.538971 | 2.2:+16144948 | MS.gene060675:CDS |
GATTTCCAGTCAAAACATCA+AGG | 0.539193 | 2.2:-16145962 | None:intergenic |
GTAATGTTATCGTCAGGCCT+TGG | 0.540087 | 2.2:-16145228 | None:intergenic |
AAACGGTTCCTATGAGAAGC+AGG | 0.540154 | 2.2:+16144891 | MS.gene060675:CDS |
TTCGCAACCATCATCGAGGC+GGG | 0.541843 | 2.2:+16153648 | MS.gene060675:CDS |
CACTTAAGAGCTTACAAGAC+GGG | 0.541969 | 2.2:-16146009 | None:intergenic |
ATATCAAACTTCTCTTCACA+TGG | 0.545609 | 2.2:+16147590 | MS.gene060675:CDS |
GTGCGCGTAATGTTATCGTC+AGG | 0.553348 | 2.2:-16145234 | None:intergenic |
GAACAATATCTTCAGCTTGA+GGG | 0.554097 | 2.2:-16144570 | None:intergenic |
ACGTTTAGCCCTGCGGCGGA+AGG | 0.554548 | 2.2:-16150603 | None:intergenic |
ATCACTCTAGTAGTGACAAA+GGG | 0.555689 | 2.2:+16145724 | MS.gene060675:CDS |
ACCACAACAATCACAACAGA+TGG | 0.556667 | 2.2:+16150449 | MS.gene060675:CDS |
TAGCCCTGCGGCGGAAGGAG+CGG | 0.556744 | 2.2:-16150598 | None:intergenic |
GAGGACAATGGTGATAGAAA+CGG | 0.558413 | 2.2:+16144874 | MS.gene060675:CDS |
CGGAGATAGCACCGGTGAGG+AGG | 0.558564 | 2.2:-16150565 | None:intergenic |
TGACGGATCAACCTTTCGGA+TGG | 0.559114 | 2.2:+16145908 | MS.gene060675:CDS |
ATCACAACAGATGGAGGAGA+TGG | 0.559223 | 2.2:+16150458 | MS.gene060675:CDS |
GTAGTACTACTGTGCATCGT+TGG | 0.559331 | 2.2:-16157450 | None:intergenic |
ACGACGCTGAATTGAGCGGC+AGG | 0.566452 | 2.2:+16157411 | MS.gene060675:CDS |
GTCGTTTGTGCGAGTCTCAA+CGG | 0.566964 | 2.2:-16157393 | None:intergenic |
TTTCTCGGGGCAATATCAGC+TGG | 0.567839 | 2.2:+16153600 | MS.gene060675:CDS |
CATCACTCTAGTAGTGACAA+AGG | 0.569474 | 2.2:+16145723 | MS.gene060675:CDS |
GTAAAGTAATTTACCAAGGA+GGG | 0.576037 | 2.2:-16145304 | None:intergenic |
TCAGCACAAGAAACAACGCC+GGG | 0.579839 | 2.2:-16144985 | None:intergenic |
GAGGTGGAACAAGCATGTCC+CGG | 0.580012 | 2.2:+16144967 | MS.gene060675:CDS |
TCGGTGGAGGAGAGAAGAGA+AGG | 0.580334 | 2.2:-16150509 | None:intergenic |
CGAACAATATCTTCAGCTTG+AGG | 0.581222 | 2.2:-16144571 | None:intergenic |
CCTTTCGGATGGATTTCGCA+AGG | 0.582493 | 2.2:+16145919 | MS.gene060675:CDS |
CAAAGTTGACTTGATTAAGG+AGG | 0.582626 | 2.2:+16144945 | MS.gene060675:CDS |
AGAAATGCTTGAACAGGTGA+AGG | 0.583226 | 2.2:-16153582 | None:intergenic |
TCTACAGGAGGACACAACAT+TGG | 0.583992 | 2.2:+16145516 | MS.gene060675:intron |
CAAAAGAACGGAATCTCTTG+TGG | 0.589570 | 2.2:-16145022 | None:intergenic |
TTACGGTGATTGTTATCTGG+CGG | 0.589706 | 2.2:-16157118 | None:intergenic |
GTTGCGATTTCATTCAGCAA+AGG | 0.590568 | 2.2:+16145547 | MS.gene060675:CDS |
CTTTCGGATGGATTTCGCAA+GGG | 0.591202 | 2.2:+16145920 | MS.gene060675:CDS |
ACCATTGTCCTCCAATAGCA+AGG | 0.592588 | 2.2:-16144863 | None:intergenic |
TGATGTTGAAAGAGAAGGAA+TGG | 0.594255 | 2.2:-16150399 | None:intergenic |
AGGCAACTGATCAGATTCCA+AGG | 0.594430 | 2.2:+16145211 | MS.gene060675:CDS |
GTTTGCTGATCAACAGCTGA+TGG | 0.595102 | 2.2:+16145842 | MS.gene060675:CDS |
AAGAAGAGACGAAGAAGAGA+AGG | 0.596825 | 2.2:-16144637 | None:intergenic |
GCTTCAATAGAGACTACTAA+AGG | 0.596943 | 2.2:+16153555 | MS.gene060675:CDS |
AATGCTTGAACAGGTGAAGG+TGG | 0.599999 | 2.2:-16153579 | None:intergenic |
GACGAAGAAGAGAAGGTGCA+AGG | 0.601488 | 2.2:-16144630 | None:intergenic |
CAGCAATTTGGATGAAAGAA+GGG | 0.606123 | 2.2:-16150535 | None:intergenic |
GATGATGATGTTGAAAGAGA+AGG | 0.609817 | 2.2:-16150404 | None:intergenic |
CAGGTCTTCAGGAGAGAAGT+CGG | 0.612433 | 2.2:+16153491 | MS.gene060675:CDS |
CAAACTTCTCTTCACATGGG+TGG | 0.615488 | 2.2:+16147594 | MS.gene060675:CDS |
TGTAAAGTAATTTACCAAGG+AGG | 0.615747 | 2.2:-16145305 | None:intergenic |
TGAACATGGATGAAGAACTT+GGG | 0.618205 | 2.2:+16147662 | MS.gene060675:CDS |
GTAATGTTGGAAGAATTGGA+AGG | 0.619608 | 2.2:-16147619 | None:intergenic |
TGAATCCTCTAAGATTGAAG+AGG | 0.625004 | 2.2:-16145263 | None:intergenic |
GTTCATGGGTTATATGAACA+TGG | 0.626106 | 2.2:+16147648 | MS.gene060675:CDS |
ACCTGTTCAAGCATTTCTCG+GGG | 0.627536 | 2.2:+16153587 | MS.gene060675:CDS |
TTGGATGAAAGAAGGGTCGT+CGG | 0.628074 | 2.2:-16150528 | None:intergenic |
ACAAACGACGCTGAATTGAG+CGG | 0.628534 | 2.2:+16157407 | MS.gene060675:CDS |
GAGGAGAACGGAGATAGCAC+CGG | 0.630741 | 2.2:-16150573 | None:intergenic |
GTGTCAAAAGATGCTCCAGA+TGG | 0.631259 | 2.2:-16145780 | None:intergenic |
ACAACAATCACAACAGATGG+AGG | 0.634223 | 2.2:+16150452 | MS.gene060675:CDS |
GTTTGAGACGTTTAGCCCTG+CGG | 0.638809 | 2.2:-16150610 | None:intergenic |
CTCTCTCTCAGAAACCCAAG+AGG | 0.640701 | 2.2:+16144382 | MS.gene060675:CDS |
TTAGCAACAAACCAAAAGAA+CGG | 0.643437 | 2.2:-16145034 | None:intergenic |
GATGAAAGAAGGGTCGTCGG+TGG | 0.646943 | 2.2:-16150525 | None:intergenic |
AGAAAATCGAGAGGTATACT+CGG | 0.649947 | 2.2:-16145603 | None:intergenic |
TGAATGCAACTATGATCCAT+GGG | 0.651938 | 2.2:-16144339 | None:intergenic |
GTCAGCACAAGAAACAACGC+CGG | 0.652611 | 2.2:-16144986 | None:intergenic |
TACTATCAGAGTTTGTTGAG+AGG | 0.661163 | 2.2:+16145807 | MS.gene060675:CDS |
TCTTAGAGGATTCAACGCAC+GGG | 0.662298 | 2.2:+16145272 | MS.gene060675:CDS |
TGTATGACTTTCAAGGAACA+GGG | 0.663098 | 2.2:+16145571 | MS.gene060675:CDS |
AGCACCGGTGAGGAGGACAC+TGG | 0.667703 | 2.2:-16150558 | None:intergenic |
TGAGAGAGAGAAGAACAGGA+AGG | 0.668854 | 2.2:-16144369 | None:intergenic |
CCTTGCGAAATCCATCCGAA+AGG | 0.669038 | 2.2:-16145919 | None:intergenic |
GAACGGAGATAGCACCGGTG+AGG | 0.671231 | 2.2:-16150568 | None:intergenic |
TCCTTGCTATTGGAGGACAA+TGG | 0.673992 | 2.2:+16144862 | MS.gene060675:CDS |
TGAGACGTTTAGCCCTGCGG+CGG | 0.674454 | 2.2:-16150607 | None:intergenic |
GTTCGCAACCATCATCGAGG+CGG | 0.681715 | 2.2:+16153647 | MS.gene060675:CDS |
TATCAAACTTCTCTTCACAT+GGG | 0.688429 | 2.2:+16147591 | MS.gene060675:CDS |
AAAGTAGATATCGGTAACAG+CGG | 0.689064 | 2.2:-16144596 | None:intergenic |
TGGAGACTTTGAAAGCTATG+GGG | 0.694173 | 2.2:+16153529 | MS.gene060675:CDS |
ATCTGACTGAGAAAATCGAG+AGG | 0.694462 | 2.2:-16145612 | None:intergenic |
TAAGTTCGCAACCATCATCG+AGG | 0.754776 | 2.2:+16153644 | MS.gene060675:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 16144316 | 16157466 | 16144316 | ID=MS.gene060675 |
chr2.2 | mRNA | 16144316 | 16157466 | 16144316 | ID=MS.gene060675.t1;Parent=MS.gene060675 |
chr2.2 | exon | 16144316 | 16144678 | 16144316 | ID=MS.gene060675.t1.exon1;Parent=MS.gene060675.t1 |
chr2.2 | CDS | 16144316 | 16144678 | 16144316 | ID=cds.MS.gene060675.t1;Parent=MS.gene060675.t1 |
chr2.2 | exon | 16144850 | 16145044 | 16144850 | ID=MS.gene060675.t1.exon2;Parent=MS.gene060675.t1 |
chr2.2 | CDS | 16144850 | 16145044 | 16144850 | ID=cds.MS.gene060675.t1;Parent=MS.gene060675.t1 |
chr2.2 | exon | 16145147 | 16145312 | 16145147 | ID=MS.gene060675.t1.exon3;Parent=MS.gene060675.t1 |
chr2.2 | CDS | 16145147 | 16145312 | 16145147 | ID=cds.MS.gene060675.t1;Parent=MS.gene060675.t1 |
chr2.2 | exon | 16145523 | 16146016 | 16145523 | ID=MS.gene060675.t1.exon4;Parent=MS.gene060675.t1 |
chr2.2 | CDS | 16145523 | 16146016 | 16145523 | ID=cds.MS.gene060675.t1;Parent=MS.gene060675.t1 |
chr2.2 | exon | 16147577 | 16147737 | 16147577 | ID=MS.gene060675.t1.exon5;Parent=MS.gene060675.t1 |
chr2.2 | CDS | 16147577 | 16147737 | 16147577 | ID=cds.MS.gene060675.t1;Parent=MS.gene060675.t1 |
chr2.2 | exon | 16150361 | 16150637 | 16150361 | ID=MS.gene060675.t1.exon6;Parent=MS.gene060675.t1 |
chr2.2 | CDS | 16150361 | 16150637 | 16150361 | ID=cds.MS.gene060675.t1;Parent=MS.gene060675.t1 |
chr2.2 | exon | 16153486 | 16153669 | 16153486 | ID=MS.gene060675.t1.exon7;Parent=MS.gene060675.t1 |
chr2.2 | CDS | 16153486 | 16153669 | 16153486 | ID=cds.MS.gene060675.t1;Parent=MS.gene060675.t1 |
chr2.2 | exon | 16157116 | 16157136 | 16157116 | ID=MS.gene060675.t1.exon8;Parent=MS.gene060675.t1 |
chr2.2 | CDS | 16157116 | 16157136 | 16157116 | ID=cds.MS.gene060675.t1;Parent=MS.gene060675.t1 |
chr2.2 | exon | 16157330 | 16157466 | 16157330 | ID=MS.gene060675.t1.exon9;Parent=MS.gene060675.t1 |
chr2.2 | CDS | 16157330 | 16157466 | 16157330 | ID=cds.MS.gene060675.t1;Parent=MS.gene060675.t1 |
Gene Sequence |
Protein sequence |