Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072799.t1 | XP_003611113.1 | 92.2 | 497 | 33 | 1 | 1 | 497 | 1 | 491 | 2.20E-257 | 897.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072799.t1 | B0X1Q4 | 25.1 | 351 | 220 | 10 | 113 | 439 | 71 | 402 | 1.1e-23 | 112.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072799.t1 | G7KDD6 | 92.2 | 497 | 33 | 1 | 1 | 497 | 1 | 491 | 1.6e-257 | 897.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050375 | MS.gene072799 | 0.877281 | 7.13E-69 | -1.69E-46 |
| MS.gene051360 | MS.gene072799 | 0.803275 | 3.77E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene072799 | 0.836531 | 8.86E-57 | -1.69E-46 |
| MS.gene051588 | MS.gene072799 | 0.839454 | 1.57E-57 | -1.69E-46 |
| MS.gene052011 | MS.gene072799 | -0.823762 | 1.16E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene072799 | 0.807126 | 5.89E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene072799 | 0.806078 | 9.80E-50 | -1.69E-46 |
| MS.gene052999 | MS.gene072799 | 0.834477 | 2.93E-56 | -1.69E-46 |
| MS.gene053169 | MS.gene072799 | 0.816502 | 5.35E-52 | -1.69E-46 |
| MS.gene054183 | MS.gene072799 | 0.815946 | 7.12E-52 | -1.69E-46 |
| MS.gene054556 | MS.gene072799 | 0.816992 | 4.16E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene072799 | 0.813412 | 2.59E-51 | -1.69E-46 |
| MS.gene057476 | MS.gene072799 | 0.807957 | 3.92E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene072799 | 0.844163 | 8.96E-59 | -1.69E-46 |
| MS.gene057823 | MS.gene072799 | 0.839639 | 1.40E-57 | -1.69E-46 |
| MS.gene057826 | MS.gene072799 | 0.833261 | 5.90E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene072799 | 0.832939 | 7.10E-56 | -1.69E-46 |
| MS.gene059141 | MS.gene072799 | 0.814883 | 1.23E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene072799 | 0.840375 | 9.03E-58 | -1.69E-46 |
| MS.gene060401 | MS.gene072799 | 0.809358 | 1.97E-50 | -1.69E-46 |
| MS.gene060986 | MS.gene072799 | 0.830459 | 2.90E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072799.t1 | MTR_5g010500 | 94.366 | 497 | 22 | 1 | 1 | 497 | 1 | 491 | 0.0 | 944 |
| MS.gene072799.t1 | MTR_8g031470 | 61.060 | 434 | 158 | 5 | 71 | 497 | 55 | 484 | 0.0 | 569 |
| MS.gene072799.t1 | MTR_8g031450 | 54.691 | 501 | 205 | 9 | 3 | 497 | 17 | 501 | 0.0 | 565 |
| MS.gene072799.t1 | MTR_0014s0440 | 60.047 | 423 | 157 | 4 | 84 | 497 | 64 | 483 | 0.0 | 546 |
| MS.gene072799.t1 | MTR_0014s0440 | 60.047 | 423 | 157 | 4 | 84 | 497 | 75 | 494 | 0.0 | 545 |
| MS.gene072799.t1 | MTR_8g031290 | 55.991 | 434 | 179 | 5 | 73 | 499 | 62 | 490 | 1.45e-179 | 514 |
| MS.gene072799.t1 | MTR_8g031470 | 57.005 | 414 | 130 | 6 | 91 | 497 | 75 | 447 | 8.40e-171 | 490 |
| MS.gene072799.t1 | MTR_7g076860 | 51.889 | 397 | 178 | 4 | 91 | 477 | 3 | 396 | 6.52e-160 | 460 |
| MS.gene072799.t1 | MTR_7g076890 | 50.600 | 417 | 189 | 7 | 73 | 477 | 15 | 426 | 4.06e-158 | 457 |
| MS.gene072799.t1 | MTR_3g464000 | 42.308 | 468 | 245 | 13 | 20 | 475 | 11 | 465 | 1.66e-122 | 367 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072799.t1 | AT5G23850 | 60.422 | 427 | 153 | 5 | 83 | 496 | 103 | 526 | 0.0 | 557 |
| MS.gene072799.t1 | AT3G48980 | 57.639 | 432 | 163 | 6 | 83 | 497 | 102 | 530 | 0.0 | 543 |
| MS.gene072799.t1 | AT3G48980 | 57.639 | 432 | 163 | 6 | 83 | 497 | 96 | 524 | 0.0 | 543 |
| MS.gene072799.t1 | AT1G63420 | 61.823 | 406 | 138 | 4 | 107 | 497 | 164 | 567 | 0.0 | 539 |
| MS.gene072799.t1 | AT2G45830 | 50.311 | 483 | 215 | 6 | 26 | 497 | 39 | 507 | 1.17e-179 | 515 |
| MS.gene072799.t1 | AT2G45830 | 50.311 | 483 | 215 | 6 | 26 | 497 | 39 | 507 | 1.17e-179 | 515 |
| MS.gene072799.t1 | AT3G61270 | 56.280 | 414 | 172 | 3 | 90 | 497 | 74 | 484 | 1.47e-178 | 511 |
| MS.gene072799.t1 | AT3G61270 | 57.609 | 368 | 147 | 3 | 136 | 497 | 1 | 365 | 7.93e-162 | 464 |
| MS.gene072799.t1 | AT2G45830 | 57.182 | 369 | 148 | 3 | 136 | 497 | 1 | 366 | 1.93e-161 | 463 |
| MS.gene072799.t1 | AT2G45830 | 57.182 | 369 | 148 | 3 | 136 | 497 | 1 | 366 | 1.93e-161 | 463 |
| MS.gene072799.t1 | AT2G45830 | 57.182 | 369 | 148 | 3 | 136 | 497 | 1 | 366 | 1.93e-161 | 463 |
| MS.gene072799.t1 | AT2G45830 | 57.182 | 369 | 148 | 3 | 136 | 497 | 1 | 366 | 1.93e-161 | 463 |
| MS.gene072799.t1 | AT3G61280 | 52.336 | 428 | 186 | 6 | 84 | 497 | 100 | 523 | 4.29e-159 | 463 |
| MS.gene072799.t1 | AT2G45840 | 50.588 | 425 | 190 | 4 | 84 | 497 | 92 | 507 | 1.05e-154 | 452 |
| MS.gene072799.t1 | AT3G61290 | 49.650 | 429 | 192 | 6 | 84 | 497 | 18 | 437 | 2.24e-147 | 431 |
| MS.gene072799.t1 | AT1G63420 | 65.878 | 296 | 88 | 3 | 107 | 391 | 164 | 457 | 5.19e-144 | 422 |
| MS.gene072799.t1 | AT1G07220 | 42.431 | 469 | 250 | 11 | 10 | 474 | 21 | 473 | 5.13e-130 | 388 |
| MS.gene072799.t1 | AT3G61280 | 52.918 | 257 | 104 | 5 | 84 | 327 | 100 | 352 | 8.97e-89 | 277 |
Find 117 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGAGAACCTTATGCTTAT+TGG | 0.143284 | 5.3:-4075900 | MS.gene072799:CDS |
| TGCAACATTATTGGCCTATA+AGG | 0.166068 | 5.3:-4075392 | MS.gene072799:CDS |
| TACAGCCATTGCAACATTAT+TGG | 0.224609 | 5.3:-4075401 | MS.gene072799:CDS |
| CATTTGTCAGTGTCCCTTAT+AGG | 0.257990 | 5.3:+4075378 | None:intergenic |
| GCCTGTTGTGCCCATGGGCT+TGG | 0.290931 | 5.3:-4076573 | MS.gene072799:CDS |
| ACTTGACAGGTACAGGAAAT+TGG | 0.312878 | 5.3:-4075022 | MS.gene072799:intron |
| TTTCCCTGACTGGTCCTTCT+GGG | 0.316015 | 5.3:-4076498 | MS.gene072799:CDS |
| CCCAAGCCCATGGGCACAAC+AGG | 0.325244 | 5.3:+4076572 | None:intergenic |
| CACATCTCCACGGCTCCTTC+AGG | 0.338213 | 5.3:+4074887 | None:intergenic |
| AATTACTGCTTGAACATGTT+TGG | 0.343612 | 5.3:+4076903 | None:intergenic |
| CCAATCAACTGCATGTTTGA+TGG | 0.347036 | 5.3:+4075350 | None:intergenic |
| AGGAACATTTGCTGCTACTA+AGG | 0.351381 | 5.3:+4076994 | None:intergenic |
| CTGCTTTCATCTCTTCCCTC+AGG | 0.356363 | 5.3:-4077385 | MS.gene072799:CDS |
| TGGAATATTCATTTAGCAAA+TGG | 0.360170 | 5.3:+4074936 | None:intergenic |
| CCATCAAACATGCAGTTGAT+TGG | 0.367325 | 5.3:-4075350 | MS.gene072799:CDS |
| GCAACATTATTGGCCTATAA+GGG | 0.371026 | 5.3:-4075391 | MS.gene072799:CDS |
| AGTCGTGTTGCAGCAGTATA+AGG | 0.373600 | 5.3:+4075868 | None:intergenic |
| GGAAGAGTAATTCTTCCCTT+TGG | 0.373637 | 5.3:+4074028 | None:intergenic |
| CCTGTTGTGCCCATGGGCTT+GGG | 0.374284 | 5.3:-4076572 | MS.gene072799:CDS |
| CATCAAACATGCAGTTGATT+GGG | 0.374429 | 5.3:-4075349 | MS.gene072799:CDS |
| TCAGGGCTGAGATTAATATA+AGG | 0.381406 | 5.3:-4075981 | MS.gene072799:intron |
| TTATGAGTGAATCCATGGTT+AGG | 0.390989 | 5.3:-4074817 | MS.gene072799:CDS |
| TCTTCCCTTTGGCTTGGCGC+TGG | 0.403264 | 5.3:+4074039 | None:intergenic |
| TGAACATGTTTGGTTCTTGA+TGG | 0.403380 | 5.3:+4076913 | None:intergenic |
| ACAGTGTTTGTTGTTGTTGT+GGG | 0.405007 | 5.3:+4077028 | None:intergenic |
| TGGCTCAAACTTGAGAAGCT+TGG | 0.409168 | 5.3:+4074916 | None:intergenic |
| AGAGAAGTGTAAAGAGTGGC+AGG | 0.411094 | 5.3:+4077434 | None:intergenic |
| CATTTGCTGCTACTAAGGTT+TGG | 0.412482 | 5.3:+4076999 | None:intergenic |
| CTGAGATTAATATAAGGCCT+TGG | 0.412673 | 5.3:-4075975 | MS.gene072799:CDS |
| TTTCCTTTCCAATAAGCATA+AGG | 0.416388 | 5.3:+4075892 | None:intergenic |
| CTAAGTGATGTGGGATCAAA+TGG | 0.418582 | 5.3:+4074758 | None:intergenic |
| CTGACTGGTCCTTCTGGGGT+TGG | 0.423962 | 5.3:-4076493 | MS.gene072799:intron |
| CTTGTGCAAGCCATGGTCTC+CGG | 0.424836 | 5.3:+4074863 | None:intergenic |
| AGATACAAAGTTTATATTGA+AGG | 0.435834 | 5.3:-4075519 | MS.gene072799:CDS |
| AAAAGGAATAACTAGAGAAA+TGG | 0.437243 | 5.3:-4076786 | MS.gene072799:CDS |
| TCAAACATGAGTTCCGAGTC+TGG | 0.439317 | 5.3:+4076608 | None:intergenic |
| GGCTTGCACAAGATCATATT+CGG | 0.443269 | 5.3:-4074852 | MS.gene072799:CDS |
| TGCTTTCATCTCTTCCCTCA+GGG | 0.457221 | 5.3:-4077384 | MS.gene072799:intron |
| AGGTGGTGGGCCCAAGCCCA+TGG | 0.463656 | 5.3:+4076562 | None:intergenic |
| AACAGTGTTTGTTGTTGTTG+TGG | 0.467098 | 5.3:+4077027 | None:intergenic |
| GGATCAAATGGAGGAGGCAA+GGG | 0.468934 | 5.3:+4074770 | None:intergenic |
| ACGGCTCCTTCAGGAACTCT+TGG | 0.477411 | 5.3:+4074896 | None:intergenic |
| ACTGTACCTGCGTAAATAAA+CGG | 0.480417 | 5.3:+4075800 | None:intergenic |
| TATGAGTGAATCCATGGTTA+GGG | 0.480560 | 5.3:-4074816 | MS.gene072799:CDS |
| GTACAGGAAATTGGTAAAGC+CGG | 0.483609 | 5.3:-4075013 | MS.gene072799:CDS |
| AGTAATTCTTCCCTTTGGCT+TGG | 0.487214 | 5.3:+4074033 | None:intergenic |
| AATGGAGGAGGCAAGGGGCA+AGG | 0.487872 | 5.3:+4074776 | None:intergenic |
| CAACCCCAGAAGGACCAGTC+AGG | 0.488262 | 5.3:+4076494 | None:intergenic |
| ATGGAGGAGGCAAGGGGCAA+GGG | 0.489670 | 5.3:+4074777 | None:intergenic |
| GAACCTTATGCTTATTGGAA+AGG | 0.492867 | 5.3:-4075895 | MS.gene072799:CDS |
| ATGTTTCAACCGCACAGGAT+TGG | 0.493210 | 5.3:-4075828 | MS.gene072799:CDS |
| CATTTGATCCCACATCACTT+AGG | 0.497579 | 5.3:-4074757 | MS.gene072799:CDS |
| TGGCAGACCAATGTACATAT+AGG | 0.498282 | 5.3:-4075651 | MS.gene072799:intron |
| TTCTTGAATAAACTTGCTCC+CGG | 0.505080 | 5.3:+4074994 | None:intergenic |
| TTGTAATGTTTCAACCGCAC+AGG | 0.505206 | 5.3:-4075833 | MS.gene072799:CDS |
| GAAATTTATGAGTGAATCCA+TGG | 0.508746 | 5.3:-4074822 | MS.gene072799:CDS |
| CAGGAGTCTTTCTGAGAAGA+AGG | 0.509789 | 5.3:+4077453 | None:intergenic |
| AGGAATAACTAGAGAAATGG+TGG | 0.511012 | 5.3:-4076783 | MS.gene072799:CDS |
| TTGTGCAAGCCATGGTCTCC+GGG | 0.511415 | 5.3:+4074864 | None:intergenic |
| TGAGATTAATATAAGGCCTT+GGG | 0.511476 | 5.3:-4075974 | MS.gene072799:CDS |
| CGGTTGAAACATTACAATTG+AGG | 0.511958 | 5.3:+4075839 | None:intergenic |
| TACAGGAAATTGGTAAAGCC+GGG | 0.515192 | 5.3:-4075012 | MS.gene072799:CDS |
| GAGGCTTCACTAATAGTGTA+GGG | 0.515936 | 5.3:+4075451 | None:intergenic |
| ATGGTACAATTCAGTACTGT+TGG | 0.518317 | 5.3:+4076932 | None:intergenic |
| CGAGGCTTCACTAATAGTGT+AGG | 0.521509 | 5.3:+4075450 | None:intergenic |
| CCCTGGTAAAATTCCAGACT+CGG | 0.522290 | 5.3:-4076621 | MS.gene072799:CDS |
| CATCTTCCCACCTCTCAACT+CGG | 0.523375 | 5.3:+4074702 | None:intergenic |
| TGATAAGCCTGTTGTGCCCA+TGG | 0.523385 | 5.3:-4076579 | MS.gene072799:CDS |
| TATGTCCGGAGTATTTCAAA+TGG | 0.530428 | 5.3:-4076838 | MS.gene072799:CDS |
| GAGAAGAGAAGTGTAAAGAG+TGG | 0.530743 | 5.3:+4077430 | None:intergenic |
| GGGATCAAATGGAGGAGGCA+AGG | 0.532099 | 5.3:+4074769 | None:intergenic |
| CTTGTCCAGCGCCAAGCCAA+AGG | 0.532446 | 5.3:-4074044 | MS.gene072799:CDS |
| GGAGATGTGCCCGGAGACCA+TGG | 0.536537 | 5.3:-4074873 | MS.gene072799:CDS |
| TTCCCTGACTGGTCCTTCTG+GGG | 0.537571 | 5.3:-4076497 | MS.gene072799:CDS |
| AGGATTCAATCACTCAAACT+TGG | 0.539657 | 5.3:-4075671 | MS.gene072799:CDS |
| TTGTCCAGCGCCAAGCCAAA+GGG | 0.543498 | 5.3:-4074043 | MS.gene072799:CDS |
| AGGAGCCGTGGAGATGTGCC+CGG | 0.545726 | 5.3:-4074882 | MS.gene072799:CDS |
| TAATAGTGTAGGGGAATCAC+AGG | 0.553816 | 5.3:+4075461 | None:intergenic |
| GGTGGAGAAAGCAAAGAAAA+CGG | 0.555442 | 5.3:-4076765 | MS.gene072799:CDS |
| AGATGAAAGCAGCGGTGATG+AGG | 0.558418 | 5.3:+4077396 | None:intergenic |
| AGGGAAGAATTACTCTTCCA+AGG | 0.563395 | 5.3:-4074024 | MS.gene072799:CDS |
| TGTAGAAGGTTCCCTAACCA+TGG | 0.568492 | 5.3:+4074805 | None:intergenic |
| AAGCAGCGGTGATGAGGATG+AGG | 0.570960 | 5.3:+4077402 | None:intergenic |
| GGAACTACCTATATGTACAT+TGG | 0.572220 | 5.3:+4075644 | None:intergenic |
| AAGAGTTCCTGAAGGAGCCG+TGG | 0.572482 | 5.3:-4074894 | MS.gene072799:CDS |
| GGTGGTGGGCCCAAGCCCAT+GGG | 0.576300 | 5.3:+4076563 | None:intergenic |
| TTCACGAGGATCTAAAACCA+TGG | 0.579924 | 5.3:-4076814 | MS.gene072799:CDS |
| AATAATGTTGCAATGGCTGT+AGG | 0.584450 | 5.3:+4075403 | None:intergenic |
| ATCAAACATGCAGTTGATTG+GGG | 0.586497 | 5.3:-4075348 | MS.gene072799:CDS |
| ATATGATCTTGTGCAAGCCA+TGG | 0.588656 | 5.3:+4074856 | None:intergenic |
| TGAATCCATTTGAAATACTC+CGG | 0.590414 | 5.3:+4076833 | None:intergenic |
| TGGATTAAAGAGTCTGAACA+AGG | 0.592715 | 5.3:-4075691 | MS.gene072799:CDS |
| ATAGGCCAATAATGTTGCAA+TGG | 0.599822 | 5.3:+4075396 | None:intergenic |
| TCCTTCAGAAGATGTTCCCA+AGG | 0.602650 | 5.3:+4075958 | None:intergenic |
| ATTTAATCAACCGAGTTGAG+AGG | 0.603531 | 5.3:-4074712 | MS.gene072799:intron |
| TTGGTTACTGTGCTGATCGG+TGG | 0.603838 | 5.3:-4076535 | MS.gene072799:CDS |
| GCCTTGGGAACATCTTCTGA+AGG | 0.605195 | 5.3:-4075959 | MS.gene072799:CDS |
| GGTCTCCGGGCACATCTCCA+CGG | 0.608605 | 5.3:+4074877 | None:intergenic |
| AACCCCAGAAGGACCAGTCA+GGG | 0.609191 | 5.3:+4076495 | None:intergenic |
| CGGAAATTAACTAACCCTGA+GGG | 0.619210 | 5.3:+4077370 | None:intergenic |
| CTGTGCTGATCGGTGGACAC+AGG | 0.621325 | 5.3:-4076528 | MS.gene072799:CDS |
| GATCAAATGGAGGAGGCAAG+GGG | 0.622941 | 5.3:+4074771 | None:intergenic |
| GATGTGGGATCAAATGGAGG+AGG | 0.623679 | 5.3:+4074764 | None:intergenic |
| TTTGAGCCAAGAGTTCCTGA+AGG | 0.639566 | 5.3:-4074902 | MS.gene072799:CDS |
| GATAAGCCTGTTGTGCCCAT+GGG | 0.642853 | 5.3:-4076578 | MS.gene072799:CDS |
| GAAACTCCGTTTATTTACGC+AGG | 0.643555 | 5.3:-4075806 | MS.gene072799:intron |
| ACATACATACCAACCCCAGA+AGG | 0.644873 | 5.3:+4076484 | None:intergenic |
| TATTCAAGAAGAGCTCAACA+TGG | 0.666732 | 5.3:-4074981 | MS.gene072799:CDS |
| GTGAAGAAATCGTAGTATCG+AGG | 0.668956 | 5.3:+4075432 | None:intergenic |
| AGTGATGTGGGATCAAATGG+AGG | 0.680524 | 5.3:+4074761 | None:intergenic |
| AGGCTTCACTAATAGTGTAG+GGG | 0.685668 | 5.3:+4075452 | None:intergenic |
| TTTATATTGAAGGATACGCG+TGG | 0.686560 | 5.3:-4075509 | MS.gene072799:CDS |
| GAGGGAAGAGATGAAAGCAG+CGG | 0.691428 | 5.3:+4077388 | None:intergenic |
| TTGCACAAGATCATATTCGG+TGG | 0.699977 | 5.3:-4074849 | MS.gene072799:CDS |
| CAATTACTGAGAAAGTACCC+TGG | 0.713086 | 5.3:-4076638 | MS.gene072799:CDS |
| GTATTTCAAATGGATTCACG+AGG | 0.719253 | 5.3:-4076828 | MS.gene072799:CDS |
| ACGGAGTTTCCAATCCTGTG+CGG | 0.723022 | 5.3:+4075819 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTATATAAATATAATA+AGG | + | chr5.3:4075406-4075425 | None:intergenic | 0.0% |
| !!! | GACATATTTTATATATTTTA+TGG | - | chr5.3:4075377-4075396 | MS.gene072799:CDS | 10.0% |
| !! | AACAATGTAATTTACTTAAT+CGG | - | chr5.3:4074199-4074218 | MS.gene072799:intron | 15.0% |
| !! | TAAATCTAATAATGATGTAT+AGG | + | chr5.3:4074312-4074331 | None:intergenic | 15.0% |
| !! | TCATATTTCATTTAATCTAA+TGG | - | chr5.3:4077178-4077197 | MS.gene072799:intron | 15.0% |
| !!! | AAACAGTTTAATCTATTTTT+TGG | - | chr5.3:4074396-4074415 | MS.gene072799:intron | 15.0% |
| !!! | ATTTTCAACATTAAGATTTA+AGG | + | chr5.3:4077405-4077424 | None:intergenic | 15.0% |
| !! | AAAAACAACAAAAAACAACA+TGG | - | chr5.3:4074631-4074650 | MS.gene072799:intron | 20.0% |
| !! | ACAATGTAATTTACTTAATC+GGG | - | chr5.3:4074200-4074219 | MS.gene072799:intron | 20.0% |
| !! | ACATCATTATTAGATTTAGA+TGG | - | chr5.3:4074314-4074333 | MS.gene072799:intron | 20.0% |
| !! | AGAATGAAAAAATAAAACAG+AGG | - | chr5.3:4074525-4074544 | MS.gene072799:intron | 20.0% |
| !! | AGATACAAAGTTTATATTGA+AGG | - | chr5.3:4075973-4075992 | MS.gene072799:CDS | 20.0% |
| !! | CTAAATTGAAGAGATAATAA+TGG | + | chr5.3:4075257-4075276 | None:intergenic | 20.0% |
| !! | TACATTAATCAACAACTATA+TGG | + | chr5.3:4075107-4075126 | None:intergenic | 20.0% |
| !! | TAGTTTAAGTACTAATTTCA+TGG | - | chr5.3:4075450-4075469 | MS.gene072799:CDS | 20.0% |
| !! | TTAATTGAGAAAATTGTGTA+GGG | + | chr5.3:4074181-4074200 | None:intergenic | 20.0% |
| !! | TTATTCAATAACTAACTAAC+TGG | + | chr5.3:4075219-4075238 | None:intergenic | 20.0% |
| !!! | AAATGCAATGTTTTTATTTC+AGG | - | chr5.3:4075493-4075512 | MS.gene072799:CDS | 20.0% |
| !!! | AAATGTACATGATGAATTTT+GGG | + | chr5.3:4075912-4075931 | None:intergenic | 20.0% |
| !!! | AACAATGACTAGTTATTATT+AGG | + | chr5.3:4077282-4077301 | None:intergenic | 20.0% |
| !!! | AATGCAATGTTTTTATTTCA+GGG | - | chr5.3:4075494-4075513 | MS.gene072799:CDS | 20.0% |
| !!! | ATATAGTTGTTGATTAATGT+AGG | - | chr5.3:4075106-4075125 | MS.gene072799:intron | 20.0% |
| !!! | ATATTTTGTCACAAATATGT+AGG | - | chr5.3:4075776-4075795 | MS.gene072799:intron | 20.0% |
| !!! | TAAATGTACATGATGAATTT+TGG | + | chr5.3:4075913-4075932 | None:intergenic | 20.0% |
| !!! | TTATTATTAGGCCAATTTTA+GGG | + | chr5.3:4077270-4077289 | None:intergenic | 20.0% |
| !!! | TTTATTTTTTCATTCTTCGT+AGG | + | chr5.3:4074521-4074540 | None:intergenic | 20.0% |
| !!! | TTTGTATTTCTATAACTCAA+AGG | + | chr5.3:4076932-4076951 | None:intergenic | 20.0% |
| ! | AAAAGGAATAACTAGAGAAA+TGG | - | chr5.3:4074706-4074725 | MS.gene072799:intron | 25.0% |
| ! | AAACTTTGTATCTGATATCA+AGG | + | chr5.3:4075966-4075985 | None:intergenic | 25.0% |
| ! | AATGAATGAGTGTAATTAAG+CGG | + | chr5.3:4074145-4074164 | None:intergenic | 25.0% |
| ! | AGTAGTAAAGATTTAAATCG+TGG | - | chr5.3:4076271-4076290 | MS.gene072799:intron | 25.0% |
| ! | ATAAAAAATCCTAAGTGATG+TGG | + | chr5.3:4076747-4076766 | None:intergenic | 25.0% |
| ! | ATCCAAATAACATAAAAGTG+GGG | + | chr5.3:4075084-4075103 | None:intergenic | 25.0% |
| ! | CAATGTAATTTACTTAATCG+GGG | - | chr5.3:4074201-4074220 | MS.gene072799:intron | 25.0% |
| ! | GATCCAAATAACATAAAAGT+GGG | + | chr5.3:4075085-4075104 | None:intergenic | 25.0% |
| ! | GTTAATTGAGAAAATTGTGT+AGG | + | chr5.3:4074182-4074201 | None:intergenic | 25.0% |
| ! | TAAAAAATCCTAAGTGATGT+GGG | + | chr5.3:4076746-4076765 | None:intergenic | 25.0% |
| ! | TCATTATTAGATTTAGATGG+CGG | - | chr5.3:4074317-4074336 | MS.gene072799:intron | 25.0% |
| ! | TCTTAAATACGCAAACAAAT+TGG | - | chr5.3:4077065-4077084 | MS.gene072799:intron | 25.0% |
| ! | TGGAATATTCATTTAGCAAA+TGG | + | chr5.3:4076559-4076578 | None:intergenic | 25.0% |
| !! | AATAATCACATTTTCTTGTC+TGG | + | chr5.3:4075167-4075186 | None:intergenic | 25.0% |
| !! | ATAATCACATTTTCTTGTCT+GGG | + | chr5.3:4075166-4075185 | None:intergenic | 25.0% |
| !! | ATATGTGATCTGAGATTAAA+TGG | + | chr5.3:4075872-4075891 | None:intergenic | 25.0% |
| !! | CTTCTGAAGGATATAAAAAA+GGG | - | chr5.3:4075546-4075565 | MS.gene072799:intron | 25.0% |
| !! | GTTATTATTAGGCCAATTTT+AGG | + | chr5.3:4077271-4077290 | None:intergenic | 25.0% |
| !! | TCTTCTGAAGGATATAAAAA+AGG | - | chr5.3:4075545-4075564 | MS.gene072799:intron | 25.0% |
| !! | TTCTGAAGGATATAAAAAAG+GGG | - | chr5.3:4075547-4075566 | MS.gene072799:intron | 25.0% |
| !! | TTTAAGACAAATGAATGACA+AGG | + | chr5.3:4076223-4076242 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTAACTCGATACC+TGG | + | chr5.3:4074374-4074393 | None:intergenic | 25.0% |
| AAAAAACAACATGGTATGTC+CGG | - | chr5.3:4074640-4074659 | MS.gene072799:intron | 30.0% | |
| AAACAAGTAGAACTGTGTTT+AGG | + | chr5.3:4075035-4075054 | None:intergenic | 30.0% | |
| AATATTCTTCGGAATGCAAT+TGG | - | chr5.3:4077358-4077377 | MS.gene072799:intron | 30.0% | |
| AATTACTGCTTGAACATGTT+TGG | + | chr5.3:4074592-4074611 | None:intergenic | 30.0% | |
| CATTATTAGATTTAGATGGC+GGG | - | chr5.3:4074318-4074337 | MS.gene072799:intron | 30.0% | |
| CTAAAACCATGGAAGAAAAA+AGG | - | chr5.3:4074689-4074708 | MS.gene072799:intron | 30.0% | |
| GAAATTTATGAGTGAATCCA+TGG | - | chr5.3:4076670-4076689 | MS.gene072799:CDS | 30.0% | |
| GGATCCAAATAACATAAAAG+TGG | + | chr5.3:4075086-4075105 | None:intergenic | 30.0% | |
| TACAGTACAGACATATCTAA+AGG | - | chr5.3:4075709-4075728 | MS.gene072799:intron | 30.0% | |
| TATGCATTTAAGAATCTCGA+TGG | + | chr5.3:4077098-4077117 | None:intergenic | 30.0% | |
| TCATTGTCATTCAAAGTTTG+TGG | - | chr5.3:4075129-4075148 | MS.gene072799:intron | 30.0% | |
| TGAGATTAATATAAGGCCTT+GGG | - | chr5.3:4075518-4075537 | MS.gene072799:CDS | 30.0% | |
| TGCGTATTTAAGAATCTTGA+CGG | + | chr5.3:4077058-4077077 | None:intergenic | 30.0% | |
| TTGTCACAAATATGTAGGAT+TGG | - | chr5.3:4075781-4075800 | MS.gene072799:intron | 30.0% | |
| TTTCCTTTCCAATAAGCATA+AGG | + | chr5.3:4075603-4075622 | None:intergenic | 30.0% | |
| ! | TGAATCCATTTGAAATACTC+CGG | + | chr5.3:4074662-4074681 | None:intergenic | 30.0% |
| !! | AATTGTTGCTTCTAAGATGT+AGG | + | chr5.3:4075352-4075371 | None:intergenic | 30.0% |
| !! | ATCCTAGTCAAATGTTTTTG+AGG | - | chr5.3:4076316-4076335 | MS.gene072799:intron | 30.0% |
| !! | ATTGTTGCTTCTAAGATGTA+GGG | + | chr5.3:4075351-4075370 | None:intergenic | 30.0% |
| !! | GTTTTTAACGTTGTTGTTGT+CGG | + | chr5.3:4074617-4074636 | None:intergenic | 30.0% |
| !!! | CACAAGTTAGTTTTCACAAT+TGG | + | chr5.3:4077218-4077237 | None:intergenic | 30.0% |
| !!! | GTTATTCCTTTTTTCTTCCA+TGG | + | chr5.3:4074698-4074717 | None:intergenic | 30.0% |
| AACACATGAATTGTTAGCAG+AGG | + | chr5.3:4074282-4074301 | None:intergenic | 35.0% | |
| AATAATGTTGCAATGGCTGT+AGG | + | chr5.3:4076092-4076111 | None:intergenic | 35.0% | |
| ACAGAGAACCTTATGCTTAT+TGG | - | chr5.3:4075592-4075611 | MS.gene072799:intron | 35.0% | |
| ACTGTACCTGCGTAAATAAA+CGG | + | chr5.3:4075695-4075714 | None:intergenic | 35.0% | |
| AGGAATAACTAGAGAAATGG+TGG | - | chr5.3:4074709-4074728 | MS.gene072799:intron | 35.0% | |
| AGGATTCAATCACTCAAACT+TGG | - | chr5.3:4075821-4075840 | MS.gene072799:CDS | 35.0% | |
| AGGGGAACAAAAGAGAAAAA+TGG | - | chr5.3:4075565-4075584 | MS.gene072799:intron | 35.0% | |
| ATAGGCCAATAATGTTGCAA+TGG | + | chr5.3:4076099-4076118 | None:intergenic | 35.0% | |
| ATCAAACATGCAGTTGATTG+GGG | - | chr5.3:4076144-4076163 | MS.gene072799:intron | 35.0% | |
| ATGGTACAATTCAGTACTGT+TGG | + | chr5.3:4074563-4074582 | None:intergenic | 35.0% | |
| CAACCTCAATTGTAATTGCA+AGG | - | chr5.3:4076339-4076358 | MS.gene072799:intron | 35.0% | |
| CATCAAACATGCAGTTGATT+GGG | - | chr5.3:4076143-4076162 | MS.gene072799:intron | 35.0% | |
| CGGTTGAAACATTACAATTG+AGG | + | chr5.3:4075656-4075675 | None:intergenic | 35.0% | |
| CTGAGATTAATATAAGGCCT+TGG | - | chr5.3:4075517-4075536 | MS.gene072799:CDS | 35.0% | |
| CTGCTAACAATTCATGTGTT+GGG | - | chr5.3:4074282-4074301 | MS.gene072799:intron | 35.0% | |
| GAACCTTATGCTTATTGGAA+AGG | - | chr5.3:4075597-4075616 | MS.gene072799:intron | 35.0% | |
| GAATATCGAAAGATATGCGA+TGG | + | chr5.3:4076201-4076220 | None:intergenic | 35.0% | |
| GGAACTACCTATATGTACAT+TGG | + | chr5.3:4075851-4075870 | None:intergenic | 35.0% | |
| TACAGCCATTGCAACATTAT+TGG | - | chr5.3:4076091-4076110 | MS.gene072799:intron | 35.0% | |
| TAGCAATGCAAATAGTAAGC+TGG | - | chr5.3:4076871-4076890 | MS.gene072799:CDS | 35.0% | |
| TATGAGTGAATCCATGGTTA+GGG | - | chr5.3:4076676-4076695 | MS.gene072799:CDS | 35.0% | |
| TATTCAAGAAGAGCTCAACA+TGG | - | chr5.3:4076511-4076530 | MS.gene072799:CDS | 35.0% | |
| TCAGGGCTGAGATTAATATA+AGG | - | chr5.3:4075511-4075530 | MS.gene072799:CDS | 35.0% | |
| TCTGCTAACAATTCATGTGT+TGG | - | chr5.3:4074281-4074300 | MS.gene072799:intron | 35.0% | |
| TGCCTCAAAAACATTTGACT+AGG | + | chr5.3:4076321-4076340 | None:intergenic | 35.0% | |
| TGGATTAAAGAGTCTGAACA+AGG | - | chr5.3:4075801-4075820 | MS.gene072799:intron | 35.0% | |
| TTATGAGTGAATCCATGGTT+AGG | - | chr5.3:4076675-4076694 | MS.gene072799:CDS | 35.0% | |
| TTTATATTGAAGGATACGCG+TGG | - | chr5.3:4075983-4076002 | MS.gene072799:intron | 35.0% | |
| ! | ATTTAATCAACCGAGTTGAG+AGG | - | chr5.3:4076780-4076799 | MS.gene072799:CDS | 35.0% |
| ! | GCAACATTATTGGCCTATAA+GGG | - | chr5.3:4076101-4076120 | MS.gene072799:intron | 35.0% |
| ! | GTATTTCAAATGGATTCACG+AGG | - | chr5.3:4074664-4074683 | MS.gene072799:intron | 35.0% |
| ! | TATGTCCGGAGTATTTCAAA+TGG | - | chr5.3:4074654-4074673 | MS.gene072799:intron | 35.0% |
| ! | TGCAACATTATTGGCCTATA+AGG | - | chr5.3:4076100-4076119 | MS.gene072799:intron | 35.0% |
| ! | TGGTGGTGAAAAATGGAAAA+GGG | - | chr5.3:4074762-4074781 | MS.gene072799:CDS | 35.0% |
| ! | TTCTTGAATAAACTTGCTCC+CGG | + | chr5.3:4076501-4076520 | None:intergenic | 35.0% |
| !! | AACAGTGTTTGTTGTTGTTG+TGG | + | chr5.3:4074468-4074487 | None:intergenic | 35.0% |
| !! | ACAGTGTTTGTTGTTGTTGT+GGG | + | chr5.3:4074467-4074486 | None:intergenic | 35.0% |
| !! | TGAACATGTTTGGTTCTTGA+TGG | + | chr5.3:4074582-4074601 | None:intergenic | 35.0% |
| !! | TTGGTGGTGAAAAATGGAAA+AGG | - | chr5.3:4074761-4074780 | MS.gene072799:CDS | 35.0% |
| !! | TTTAGGTTGGTGGTGAAAAA+TGG | - | chr5.3:4074755-4074774 | MS.gene072799:CDS | 35.0% |
| !!! | TTTTTGGTTACTGTGCTGAT+CGG | - | chr5.3:4074954-4074973 | MS.gene072799:CDS | 35.0% |
| ACACTTGTGCACCCTAAAAT+TGG | - | chr5.3:4077256-4077275 | MS.gene072799:intron | 40.0% | |
| ACTACTAACTTGACAGGTAC+AGG | - | chr5.3:4076463-4076482 | MS.gene072799:intron | 40.0% | |
| ACTTGACAGGTACAGGAAAT+TGG | - | chr5.3:4076470-4076489 | MS.gene072799:intron | 40.0% | |
| AGAGGTGGGAAGATGAATAT+TGG | - | chr5.3:4076798-4076817 | MS.gene072799:CDS | 40.0% | |
| AGGCTTCACTAATAGTGTAG+GGG | + | chr5.3:4076043-4076062 | None:intergenic | 40.0% | |
| AGGGAAGAATTACTCTTCCA+AGG | - | chr5.3:4077468-4077487 | MS.gene072799:CDS | 40.0% | |
| AGTAACCAAAAACAGGTGGT+GGG | + | chr5.3:4074946-4074965 | None:intergenic | 40.0% | |
| AGTAATTCTTCCCTTTGGCT+TGG | + | chr5.3:4077462-4077481 | None:intergenic | 40.0% | |
| ATATGATCTTGTGCAAGCCA+TGG | + | chr5.3:4076639-4076658 | None:intergenic | 40.0% | |
| CATTTGATCCCACATCACTT+AGG | - | chr5.3:4076735-4076754 | MS.gene072799:CDS | 40.0% | |
| CATTTGTCAGTGTCCCTTAT+AGG | + | chr5.3:4076117-4076136 | None:intergenic | 40.0% | |
| CCAATCAACTGCATGTTTGA+TGG | + | chr5.3:4076145-4076164 | None:intergenic | 40.0% | |
| CCATCAAACATGCAGTTGAT+TGG | - | chr5.3:4076142-4076161 | MS.gene072799:intron | 40.0% | |
| CGGAAATTAACTAACCCTGA+GGG | + | chr5.3:4074125-4074144 | None:intergenic | 40.0% | |
| CTAAGTGATGTGGGATCAAA+TGG | + | chr5.3:4076737-4076756 | None:intergenic | 40.0% | |
| CTCAATTGTAATTGCAAGGC+AGG | - | chr5.3:4076343-4076362 | MS.gene072799:intron | 40.0% | |
| CTGCCTTGCAATTACAATTG+AGG | + | chr5.3:4076345-4076364 | None:intergenic | 40.0% | |
| GAAACTCCGTTTATTTACGC+AGG | - | chr5.3:4075686-4075705 | MS.gene072799:CDS | 40.0% | |
| GAGGCTTCACTAATAGTGTA+GGG | + | chr5.3:4076044-4076063 | None:intergenic | 40.0% | |
| GATCGAGTATCTAGATGACT+AGG | - | chr5.3:4077001-4077020 | MS.gene072799:CDS | 40.0% | |
| GGAAGAGTAATTCTTCCCTT+TGG | + | chr5.3:4077467-4077486 | None:intergenic | 40.0% | |
| GGCTTGCACAAGATCATATT+CGG | - | chr5.3:4076640-4076659 | MS.gene072799:CDS | 40.0% | |
| GGTGGAGAAAGCAAAGAAAA+CGG | - | chr5.3:4074727-4074746 | MS.gene072799:CDS | 40.0% | |
| GTACAGGAAATTGGTAAAGC+CGG | - | chr5.3:4076479-4076498 | MS.gene072799:intron | 40.0% | |
| GTGAAGAAATCGTAGTATCG+AGG | + | chr5.3:4076063-4076082 | None:intergenic | 40.0% | |
| GTGCGTATGTATTTGCTCAT+TGG | + | chr5.3:4076832-4076851 | None:intergenic | 40.0% | |
| TAATAGTGTAGGGGAATCAC+AGG | + | chr5.3:4076034-4076053 | None:intergenic | 40.0% | |
| TAATTCTCGTGAAGCATGCT+TGG | - | chr5.3:4075058-4075077 | MS.gene072799:intron | 40.0% | |
| TAATTGCAGAATCCCCCAAA+CGG | + | chr5.3:4074840-4074859 | None:intergenic | 40.0% | |
| TACAGGAAATTGGTAAAGCC+GGG | - | chr5.3:4076480-4076499 | MS.gene072799:intron | 40.0% | |
| TCAGCACAGTAACCAAAAAC+AGG | + | chr5.3:4074953-4074972 | None:intergenic | 40.0% | |
| TGGCAGACCAATGTACATAT+AGG | - | chr5.3:4075841-4075860 | MS.gene072799:CDS | 40.0% | |
| TGTACCACTACTAACTTGAC+AGG | - | chr5.3:4076457-4076476 | MS.gene072799:intron | 40.0% | |
| TGTACCTGTCAAGTTAGTAG+TGG | + | chr5.3:4076464-4076483 | None:intergenic | 40.0% | |
| TTCCACAACTTATTCGATCC+TGG | - | chr5.3:4074345-4074364 | MS.gene072799:intron | 40.0% | |
| TTGCACAAGATCATATTCGG+TGG | - | chr5.3:4076643-4076662 | MS.gene072799:CDS | 40.0% | |
| TTGTAATGTTTCAACCGCAC+AGG | - | chr5.3:4075659-4075678 | MS.gene072799:CDS | 40.0% | |
| ! | ACGTGATGTTTTCACCGTTT+GGG | - | chr5.3:4074823-4074842 | MS.gene072799:CDS | 40.0% |
| ! | AGGAACATTTGCTGCTACTA+AGG | + | chr5.3:4074501-4074520 | None:intergenic | 40.0% |
| ! | AGGATATTGTTTTCCCTGAC+TGG | - | chr5.3:4074984-4075003 | MS.gene072799:CDS | 40.0% |
| ! | CAAAGAAAACGGCGCATTTT+AGG | - | chr5.3:4074738-4074757 | MS.gene072799:CDS | 40.0% |
| ! | CAAGAAGCATACACGGTATA+TGG | + | chr5.3:4076249-4076268 | None:intergenic | 40.0% |
| ! | CATTTGCTGCTACTAAGGTT+TGG | + | chr5.3:4074496-4074515 | None:intergenic | 40.0% |
| ! | CTACTGTCAAGAAGCATACA+CGG | + | chr5.3:4076256-4076275 | None:intergenic | 40.0% |
| ! | GAGAAGAGAAGTGTAAAGAG+TGG | + | chr5.3:4074065-4074084 | None:intergenic | 40.0% |
| ! | TACCTTTGTTATGTCGACGA+CGG | - | chr5.3:4075192-4075211 | MS.gene072799:intron | 40.0% |
| ! | TTCACGAGGATCTAAAACCA+TGG | - | chr5.3:4074678-4074697 | MS.gene072799:intron | 40.0% |
| !! | CAATTACTGAGAAAGTACCC+TGG | - | chr5.3:4074854-4074873 | MS.gene072799:CDS | 40.0% |
| !! | GGCCCCACTTTTATGTTATT+TGG | - | chr5.3:4075079-4075098 | MS.gene072799:intron | 40.0% |
| ACATACATACCAACCCCAGA+AGG | + | chr5.3:4075011-4075030 | None:intergenic | 45.0% | |
| AGTCGTGTTGCAGCAGTATA+AGG | + | chr5.3:4075627-4075646 | None:intergenic | 45.0% | |
| AGTGATGTGGGATCAAATGG+AGG | + | chr5.3:4076734-4076753 | None:intergenic | 45.0% | |
| ATGTAAAATCGCCTTGCACC+AGG | - | chr5.3:4077117-4077136 | MS.gene072799:intron | 45.0% | |
| ATGTTTCAACCGCACAGGAT+TGG | - | chr5.3:4075664-4075683 | MS.gene072799:CDS | 45.0% | |
| CACAACTTATTCGATCCTGG+TGG | - | chr5.3:4074348-4074367 | MS.gene072799:intron | 45.0% | |
| CACCAGGATCGAATAAGTTG+TGG | + | chr5.3:4074350-4074369 | None:intergenic | 45.0% | |
| CAGTAACCAAAAACAGGTGG+TGG | + | chr5.3:4074947-4074966 | None:intergenic | 45.0% | |
| CCACAGGCTCACTAAATCTT+AGG | + | chr5.3:4076369-4076388 | None:intergenic | 45.0% | |
| CCCTGGTAAAATTCCAGACT+CGG | - | chr5.3:4074871-4074890 | MS.gene072799:CDS | 45.0% | |
| CCTAAGATTTAGTGAGCCTG+TGG | - | chr5.3:4076366-4076385 | MS.gene072799:intron | 45.0% | |
| CGAGGCTTCACTAATAGTGT+AGG | + | chr5.3:4076045-4076064 | None:intergenic | 45.0% | |
| GATTTAGTGAGCCTGTGGTT+TGG | - | chr5.3:4076371-4076390 | MS.gene072799:intron | 45.0% | |
| GCACAGTAACCAAAAACAGG+TGG | + | chr5.3:4074950-4074969 | None:intergenic | 45.0% | |
| GCGGAAATTAACTAACCCTG+AGG | + | chr5.3:4074126-4074145 | None:intergenic | 45.0% | |
| TCAAACATGAGTTCCGAGTC+TGG | + | chr5.3:4074887-4074906 | None:intergenic | 45.0% | |
| TCCTTCAGAAGATGTTCCCA+AGG | + | chr5.3:4075537-4075556 | None:intergenic | 45.0% | |
| TGCTTTCATCTCTTCCCTCA+GGG | - | chr5.3:4074108-4074127 | MS.gene072799:intron | 45.0% | |
| TGGCTCAAACTTGAGAAGCT+TGG | + | chr5.3:4076579-4076598 | None:intergenic | 45.0% | |
| TGTAGAAGGTTCCCTAACCA+TGG | + | chr5.3:4076690-4076709 | None:intergenic | 45.0% | |
| TTTGAGCCAAGAGTTCCTGA+AGG | - | chr5.3:4076590-4076609 | MS.gene072799:CDS | 45.0% | |
| ! | AATCAACCGAGTTGAGAGGT+GGG | - | chr5.3:4076784-4076803 | MS.gene072799:CDS | 45.0% |
| ! | AGAGAAGTGTAAAGAGTGGC+AGG | + | chr5.3:4074061-4074080 | None:intergenic | 45.0% |
| ! | ATTTAAGGCTACCTCAGTGC+AGG | + | chr5.3:4077390-4077409 | None:intergenic | 45.0% |
| ! | CACGTGATGTTTTCACCGTT+TGG | - | chr5.3:4074822-4074841 | MS.gene072799:CDS | 45.0% |
| ! | CAGGAGTCTTTCTGAGAAGA+AGG | + | chr5.3:4074042-4074061 | None:intergenic | 45.0% |
| ! | CGTGATGTTTTCACCGTTTG+GGG | - | chr5.3:4074824-4074843 | MS.gene072799:CDS | 45.0% |
| ! | GTGATGTTTTCACCGTTTGG+GGG | - | chr5.3:4074825-4074844 | MS.gene072799:CDS | 45.0% |
| ! | TAATCAACCGAGTTGAGAGG+TGG | - | chr5.3:4076783-4076802 | MS.gene072799:CDS | 45.0% |
| ! | TTTAAGGCTACCTCAGTGCA+GGG | + | chr5.3:4077389-4077408 | None:intergenic | 45.0% |
| !! | CCGAGTCTGGAATTTTACCA+GGG | + | chr5.3:4074874-4074893 | None:intergenic | 45.0% |
| !! | GAAAACGGCGCATTTTAGGT+TGG | - | chr5.3:4074742-4074761 | MS.gene072799:CDS | 45.0% |
| !! | TCCGAGTCTGGAATTTTACC+AGG | + | chr5.3:4074875-4074894 | None:intergenic | 45.0% |
| !! | ATAATATTATTAATATTCTT+CGG | - | chr5.3:4077347-4077366 | MS.gene072799:intron | 5.0% |
| ACGGAGTTTCCAATCCTGTG+CGG | + | chr5.3:4075676-4075695 | None:intergenic | 50.0% | |
| AGATGAAAGCAGCGGTGATG+AGG | + | chr5.3:4074099-4074118 | None:intergenic | 50.0% | |
| AGGCTTGAGACCTAGAAAGG+AGG | + | chr5.3:4074262-4074281 | None:intergenic | 50.0% | |
| AGGTCTCAAGCCTTCACGAA+CGG | + | chr5.3:4074232-4074251 | None:intergenic | 50.0% | |
| CAGAGGCTTGAGACCTAGAA+AGG | + | chr5.3:4074265-4074284 | None:intergenic | 50.0% | |
| CATCTTCCCACCTCTCAACT+CGG | + | chr5.3:4076793-4076812 | None:intergenic | 50.0% | |
| CATGATCAATGACGCGACCA+GGG | + | chr5.3:4076402-4076421 | None:intergenic | 50.0% | |
| CCTAGGAACACCTCCTTTCT+AGG | - | chr5.3:4074249-4074268 | MS.gene072799:intron | 50.0% | |
| CTGCTTTCATCTCTTCCCTC+AGG | - | chr5.3:4074107-4074126 | MS.gene072799:intron | 50.0% | |
| GACCGTCGTCGACATAACAA+AGG | + | chr5.3:4075197-4075216 | None:intergenic | 50.0% | |
| GAGGGAAGAGATGAAAGCAG+CGG | + | chr5.3:4074107-4074126 | None:intergenic | 50.0% | |
| GATAAGCCTGTTGTGCCCAT+GGG | - | chr5.3:4074914-4074933 | MS.gene072799:CDS | 50.0% | |
| GATCAAATGGAGGAGGCAAG+GGG | + | chr5.3:4076724-4076743 | None:intergenic | 50.0% | |
| GATGTGGGATCAAATGGAGG+AGG | + | chr5.3:4076731-4076750 | None:intergenic | 50.0% | |
| GCCTTGGGAACATCTTCTGA+AGG | - | chr5.3:4075533-4075552 | MS.gene072799:intron | 50.0% | |
| GGATCAAATGGAGGAGGCAA+GGG | + | chr5.3:4076725-4076744 | None:intergenic | 50.0% | |
| GTGAAAAAGACGCTTGTGCC+TGG | + | chr5.3:4077138-4077157 | None:intergenic | 50.0% | |
| TGATAAGCCTGTTGTGCCCA+TGG | - | chr5.3:4074913-4074932 | MS.gene072799:CDS | 50.0% | |
| TTCGTGAAGGCTTGAGACCT+AGG | - | chr5.3:4074232-4074251 | MS.gene072799:intron | 50.0% | |
| ! | GGGCAAGGGTCTTTTGTAGA+AGG | + | chr5.3:4076704-4076723 | None:intergenic | 50.0% |
| ! | TTGGTTACTGTGCTGATCGG+TGG | - | chr5.3:4074957-4074976 | MS.gene072799:CDS | 50.0% |
| ! | TTTCCCTGACTGGTCCTTCT+GGG | - | chr5.3:4074994-4075013 | MS.gene072799:CDS | 50.0% |
| !! | CCTAGAAAGGAGGTGTTCCT+AGG | + | chr5.3:4074252-4074271 | None:intergenic | 50.0% |
| !! | TTTTCCCTGACTGGTCCTTC+TGG | - | chr5.3:4074993-4075012 | MS.gene072799:CDS | 50.0% |
| !!! | AACGGCGCATTTTAGGTTGG+TGG | - | chr5.3:4074745-4074764 | MS.gene072799:CDS | 50.0% |
| AACCCCAGAAGGACCAGTCA+GGG | + | chr5.3:4075000-4075019 | None:intergenic | 55.0% | |
| AAGAGTTCCTGAAGGAGCCG+TGG | - | chr5.3:4076598-4076617 | MS.gene072799:CDS | 55.0% | |
| AAGCAGCGGTGATGAGGATG+AGG | + | chr5.3:4074093-4074112 | None:intergenic | 55.0% | |
| ACGGCTCCTTCAGGAACTCT+TGG | + | chr5.3:4076599-4076618 | None:intergenic | 55.0% | |
| ATTGGCTGATCCCTGCACTG+AGG | - | chr5.3:4077376-4077395 | MS.gene072799:intron | 55.0% | |
| CCATGATCAATGACGCGACC+AGG | + | chr5.3:4076403-4076422 | None:intergenic | 55.0% | |
| CCTGGTCGCGTCATTGATCA+TGG | - | chr5.3:4076400-4076419 | MS.gene072799:intron | 55.0% | |
| CTTATTCGATCCTGGTGGCC+AGG | - | chr5.3:4074353-4074372 | MS.gene072799:intron | 55.0% | |
| CTTGTGCAAGCCATGGTCTC+CGG | + | chr5.3:4076632-4076651 | None:intergenic | 55.0% | |
| GGGATCAAATGGAGGAGGCA+AGG | + | chr5.3:4076726-4076745 | None:intergenic | 55.0% | |
| GGTCTCAAGCCTTCACGAAC+GGG | + | chr5.3:4074231-4074250 | None:intergenic | 55.0% | |
| TAACTCGATACCTGGCCACC+AGG | + | chr5.3:4074366-4074385 | None:intergenic | 55.0% | |
| TTGTCCAGCGCCAAGCCAAA+GGG | - | chr5.3:4077449-4077468 | MS.gene072799:CDS | 55.0% | |
| TTGTGCAAGCCATGGTCTCC+GGG | + | chr5.3:4076631-4076650 | None:intergenic | 55.0% | |
| ! | AGTGAGCCTGTGGTTTGGAC+CGG | - | chr5.3:4076376-4076395 | MS.gene072799:intron | 55.0% |
| ! | TTCCCTGACTGGTCCTTCTG+GGG | - | chr5.3:4074995-4075014 | MS.gene072799:CDS | 55.0% |
| ! | TTGGGCCCACCACCTGTTTT+TGG | - | chr5.3:4074938-4074957 | MS.gene072799:CDS | 55.0% |
| AATGGAGGAGGCAAGGGGCA+AGG | + | chr5.3:4076719-4076738 | None:intergenic | 60.0% | |
| AGACGCTTGTGCCTGGTGCA+AGG | + | chr5.3:4077131-4077150 | None:intergenic | 60.0% | |
| ATCAATGACGCGACCAGGGC+CGG | + | chr5.3:4076398-4076417 | None:intergenic | 60.0% | |
| ATGGAGGAGGCAAGGGGCAA+GGG | + | chr5.3:4076718-4076737 | None:intergenic | 60.0% | |
| CAACCCCAGAAGGACCAGTC+AGG | + | chr5.3:4075001-4075020 | None:intergenic | 60.0% | |
| CACATCTCCACGGCTCCTTC+AGG | + | chr5.3:4076608-4076627 | None:intergenic | 60.0% | |
| CCTGTTGTGCCCATGGGCTT+GGG | - | chr5.3:4074920-4074939 | MS.gene072799:CDS | 60.0% | |
| CTTGTCCAGCGCCAAGCCAA+AGG | - | chr5.3:4077448-4077467 | MS.gene072799:CDS | 60.0% | |
| ! | CTGTGCTGATCGGTGGACAC+AGG | - | chr5.3:4074964-4074983 | MS.gene072799:CDS | 60.0% |
| !! | CTGACTGGTCCTTCTGGGGT+TGG | - | chr5.3:4074999-4075018 | MS.gene072799:CDS | 60.0% |
| !! | TCTTCCCTTTGGCTTGGCGC+TGG | + | chr5.3:4077456-4077475 | None:intergenic | 60.0% |
| AGGAGCCGTGGAGATGTGCC+CGG | - | chr5.3:4076610-4076629 | MS.gene072799:CDS | 65.0% | |
| CCCAAGCCCATGGGCACAAC+AGG | + | chr5.3:4074923-4074942 | None:intergenic | 65.0% | |
| GCCTGTTGTGCCCATGGGCT+TGG | - | chr5.3:4074919-4074938 | MS.gene072799:CDS | 65.0% | |
| GGAGATGTGCCCGGAGACCA+TGG | - | chr5.3:4076619-4076638 | MS.gene072799:CDS | 65.0% | |
| GGTCTCCGGGCACATCTCCA+CGG | + | chr5.3:4076618-4076637 | None:intergenic | 65.0% | |
| CCAGGGCCGGTCCAAACCAC+AGG | + | chr5.3:4076385-4076404 | None:intergenic | 70.0% | |
| CGGGGCTGACCCGTTCGTGA+AGG | - | chr5.3:4074219-4074238 | MS.gene072799:intron | 70.0% | |
| ! | CCTGTGGTTTGGACCGGCCC+TGG | - | chr5.3:4076382-4076401 | MS.gene072799:intron | 70.0% |
| !! | AGGTGGTGGGCCCAAGCCCA+TGG | + | chr5.3:4074933-4074952 | None:intergenic | 70.0% |
| !! | GGTGGTGGGCCCAAGCCCAT+GGG | + | chr5.3:4074932-4074951 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 4074016 | 4077498 | 4074016 | ID=MS.gene072799 |
| chr5.3 | mRNA | 4074016 | 4077498 | 4074016 | ID=MS.gene072799.t1;Parent=MS.gene072799 |
| chr5.3 | exon | 4077385 | 4077498 | 4077385 | ID=MS.gene072799.t1.exon1;Parent=MS.gene072799.t1 |
| chr5.3 | CDS | 4077385 | 4077498 | 4077385 | ID=cds.MS.gene072799.t1;Parent=MS.gene072799.t1 |
| chr5.3 | exon | 4076494 | 4077080 | 4076494 | ID=MS.gene072799.t1.exon2;Parent=MS.gene072799.t1 |
| chr5.3 | CDS | 4076494 | 4077080 | 4076494 | ID=cds.MS.gene072799.t1;Parent=MS.gene072799.t1 |
| chr5.3 | exon | 4075807 | 4075999 | 4075807 | ID=MS.gene072799.t1.exon3;Parent=MS.gene072799.t1 |
| chr5.3 | CDS | 4075807 | 4075999 | 4075807 | ID=cds.MS.gene072799.t1;Parent=MS.gene072799.t1 |
| chr5.3 | exon | 4075652 | 4075716 | 4075652 | ID=MS.gene072799.t1.exon4;Parent=MS.gene072799.t1 |
| chr5.3 | CDS | 4075652 | 4075716 | 4075652 | ID=cds.MS.gene072799.t1;Parent=MS.gene072799.t1 |
| chr5.3 | exon | 4075329 | 4075539 | 4075329 | ID=MS.gene072799.t1.exon5;Parent=MS.gene072799.t1 |
| chr5.3 | CDS | 4075329 | 4075539 | 4075329 | ID=cds.MS.gene072799.t1;Parent=MS.gene072799.t1 |
| chr5.3 | exon | 4074713 | 4075035 | 4074713 | ID=MS.gene072799.t1.exon6;Parent=MS.gene072799.t1 |
| chr5.3 | CDS | 4074713 | 4075035 | 4074713 | ID=cds.MS.gene072799.t1;Parent=MS.gene072799.t1 |
| chr5.3 | exon | 4074016 | 4074076 | 4074016 | ID=MS.gene072799.t1.exon7;Parent=MS.gene072799.t1 |
| chr5.3 | CDS | 4074016 | 4074076 | 4074016 | ID=cds.MS.gene072799.t1;Parent=MS.gene072799.t1 |
| Gene Sequence |
| Protein sequence |
