Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072913.t1 | AES73673.1 | 98.1 | 215 | 4 | 0 | 1 | 215 | 47 | 261 | 9.30E-109 | 402.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072913.t1 | G7JB45 | 98.1 | 215 | 4 | 0 | 1 | 215 | 47 | 261 | 6.7e-109 | 402.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049993 | MS.gene072913 | -0.801146 | 1.03E-48 | -1.69E-46 |
| MS.gene051525 | MS.gene072913 | -0.811128 | 8.18E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene072913 | -0.829138 | 6.09E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene072913 | -0.818925 | 1.52E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene072913 | -0.807394 | 5.16E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene072913 | -0.815554 | 8.71E-52 | -1.69E-46 |
| MS.gene054183 | MS.gene072913 | -0.817368 | 3.42E-52 | -1.69E-46 |
| MS.gene054556 | MS.gene072913 | -0.805676 | 1.19E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene072913 | -0.801695 | 7.98E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene072913 | 0.809928 | 1.48E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene072913 | -0.820642 | 6.16E-53 | -1.69E-46 |
| MS.gene058142 | MS.gene072913 | -0.81858 | 1.82E-52 | -1.69E-46 |
| MS.gene059609 | MS.gene072913 | -0.80872 | 2.70E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene072913 | -0.811265 | 7.63E-51 | -1.69E-46 |
| MS.gene061114 | MS.gene072913 | 0.824483 | 7.88E-54 | -1.69E-46 |
| MS.gene061159 | MS.gene072913 | -0.806428 | 8.27E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072913.t1 | MTR_3g107550 | 98.140 | 215 | 4 | 0 | 1 | 215 | 47 | 261 | 4.32e-153 | 425 |
| MS.gene072913.t1 | MTR_4g011110 | 50.323 | 155 | 73 | 2 | 38 | 192 | 118 | 268 | 1.32e-49 | 163 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072913.t1 | AT5G11280 | 72.195 | 205 | 54 | 2 | 13 | 215 | 6 | 209 | 2.82e-111 | 317 |
| MS.gene072913.t1 | AT1G80200 | 40.933 | 193 | 108 | 4 | 6 | 192 | 25 | 217 | 1.93e-41 | 140 |
| MS.gene072913.t1 | AT1G80200 | 40.933 | 193 | 108 | 4 | 6 | 192 | 27 | 219 | 2.52e-41 | 140 |
| MS.gene072913.t1 | AT1G80200 | 41.935 | 186 | 102 | 4 | 13 | 192 | 4 | 189 | 2.64e-41 | 139 |
Find 62 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCCTGGTGCTGCTTTAAA+TGG | 0.213795 | 3.4:+93432983 | MS.gene072913:CDS |
| TTGGATCACTTCTTGTGATA+TGG | 0.253529 | 3.4:+93433820 | MS.gene072913:CDS |
| TTCGCAGGATCAGTATTTAC+TGG | 0.318077 | 3.4:-93433873 | None:intergenic |
| TGTAAAGTATGATATGAAAA+AGG | 0.337916 | 3.4:+93433950 | MS.gene072913:CDS |
| CCCGGTAGAATGAGCATGTT+TGG | 0.342893 | 3.4:+93433801 | MS.gene072913:CDS |
| ATGATTTATCAGGTCCTTGC+AGG | 0.367749 | 3.4:+93433735 | MS.gene072913:intron |
| TCCTAGTTGGGATAGTTTGT+TGG | 0.385762 | 3.4:+93433027 | MS.gene072913:CDS |
| GACTTTGATGAGCTCTTAAG+AGG | 0.392333 | 3.4:-93434011 | None:intergenic |
| TTTCCTGTTCCACTTGTAAA+GGG | 0.393641 | 3.4:+93432953 | MS.gene072913:CDS |
| CTGCCAGGGCGGCCCCTGTC+CGG | 0.403387 | 3.4:+93433976 | MS.gene072913:CDS |
| TACAGGGTTACATGCAGATC+TGG | 0.408658 | 3.4:+93432875 | MS.gene072913:intron |
| ATCATGGCAAACACCATTGT+TGG | 0.415601 | 3.4:-93433912 | None:intergenic |
| GGAAGCTACTTTGCAGTAGC+AGG | 0.416283 | 3.4:+93433756 | MS.gene072913:CDS |
| TGGATCACTTCTTGTGATAT+GGG | 0.418628 | 3.4:+93433821 | MS.gene072913:CDS |
| GCAGTAGCAGGAGCACTTGT+TGG | 0.425218 | 3.4:+93433768 | MS.gene072913:CDS |
| ATTTCCTGTTCCACTTGTAA+AGG | 0.426556 | 3.4:+93432952 | MS.gene072913:CDS |
| GTGATGATGTTACATGTAAA+GGG | 0.435849 | 3.4:-93432910 | None:intergenic |
| TGAGGAAATGTTCCATCCCT+TGG | 0.437177 | 3.4:-93432726 | None:intergenic |
| AGACCCTTTACAAGTGGAAC+AGG | 0.438573 | 3.4:-93432956 | None:intergenic |
| CAACATGACTGTTCCTAGTT+GGG | 0.458590 | 3.4:+93433015 | MS.gene072913:CDS |
| TGCAGAAGCTTCCTTGATAG+TGG | 0.474544 | 3.4:-93433065 | None:intergenic |
| TCCAAACATGCTCATTCTAC+CGG | 0.484946 | 3.4:-93433802 | None:intergenic |
| TGTGATGATGTTACATGTAA+AGG | 0.485821 | 3.4:-93432911 | None:intergenic |
| GGACCGGACAGGGGCCGCCC+TGG | 0.487426 | 3.4:-93433979 | None:intergenic |
| ACAACATGACTGTTCCTAGT+TGG | 0.492866 | 3.4:+93433014 | MS.gene072913:CDS |
| GTATAATTTGACCACTATCA+AGG | 0.493949 | 3.4:+93433054 | MS.gene072913:CDS |
| CTTGGAAGATGATGATGAGT+AGG | 0.494468 | 3.4:-93432766 | None:intergenic |
| AACCGATCTTCAACGCTTGG+AGG | 0.495020 | 3.4:+93433090 | MS.gene072913:CDS |
| GGTTTAGCAGTGGACCGGAC+AGG | 0.498097 | 3.4:-93433990 | None:intergenic |
| GTAGATGCGTGCTGCGATTG+AGG | 0.506076 | 3.4:-93432744 | None:intergenic |
| AGACAAGAAGGCACATATCA+TGG | 0.508797 | 3.4:-93433928 | None:intergenic |
| GTTTAGCAGTGGACCGGACA+GGG | 0.519587 | 3.4:-93433989 | None:intergenic |
| TCATGGCAAACACCATTGTT+GGG | 0.522116 | 3.4:-93433911 | None:intergenic |
| GGATCACTTCTTGTGATATG+GGG | 0.524575 | 3.4:+93433822 | MS.gene072913:CDS |
| GAACAGTCATGTTGTGGATG+AGG | 0.528098 | 3.4:-93433006 | None:intergenic |
| AGTACCTGAAAAGAGGGACT+TGG | 0.536129 | 3.4:-93432784 | None:intergenic |
| CCAAACATGCTCATTCTACC+GGG | 0.539556 | 3.4:-93433801 | None:intergenic |
| TAAGAGGTTTAGCAGTGGAC+CGG | 0.544646 | 3.4:-93433995 | None:intergenic |
| ATCATACTTTACAGACAAGA+AGG | 0.545178 | 3.4:-93433940 | None:intergenic |
| GAAATCATCACCTTCATCCA+AGG | 0.545466 | 3.4:+93432709 | MS.gene072913:CDS |
| ATGTTCCATCCCTTGGATGA+AGG | 0.546480 | 3.4:-93432719 | None:intergenic |
| AGTAACCGATCTTCAACGCT+TGG | 0.561137 | 3.4:+93433087 | MS.gene072913:CDS |
| ACTTCTTGTGATATGGGGAC+TGG | 0.561214 | 3.4:+93433827 | MS.gene072913:CDS |
| AGGCCATTTAAAGCAGCACC+AGG | 0.563544 | 3.4:-93432986 | None:intergenic |
| AACTAGGAACAGTCATGTTG+TGG | 0.564260 | 3.4:-93433012 | None:intergenic |
| ATATGGGGACTGGTCAAAGA+AGG | 0.566921 | 3.4:+93433837 | MS.gene072913:CDS |
| AACCTCCAAGCGTTGAAGAT+CGG | 0.570379 | 3.4:-93433092 | None:intergenic |
| GTTTGGGAGTACCTGAAAAG+AGG | 0.572459 | 3.4:-93432791 | None:intergenic |
| AGATACAACTTGTGTTGCCA+TGG | 0.577324 | 3.4:-93432684 | None:intergenic |
| TACAAAAGACCCTTTACAAG+TGG | 0.585226 | 3.4:-93432962 | None:intergenic |
| TAGACGTAGACAGCTTTCGC+AGG | 0.586449 | 3.4:-93433888 | None:intergenic |
| CATCACCTTCATCCAAGGGA+TGG | 0.592421 | 3.4:+93432714 | MS.gene072913:CDS |
| CTTGTTGGTATTCTGAAACC+CGG | 0.595853 | 3.4:+93433783 | MS.gene072913:CDS |
| TTTGGGAGTACCTGAAAAGA+GGG | 0.608777 | 3.4:-93432790 | None:intergenic |
| AAATCATCACCTTCATCCAA+GGG | 0.613603 | 3.4:+93432710 | MS.gene072913:CDS |
| TTTAGCAGTGGACCGGACAG+GGG | 0.629054 | 3.4:-93433988 | None:intergenic |
| TCCAACAAACTATCCCAACT+AGG | 0.646774 | 3.4:-93433028 | None:intergenic |
| CTGCAAAGTAGCTTCCTGCA+AGG | 0.676389 | 3.4:-93433749 | None:intergenic |
| TGTCTACGTCTACCCAACAA+TGG | 0.684219 | 3.4:+93433899 | MS.gene072913:CDS |
| GCTCTTAAGAGGTTTAGCAG+TGG | 0.687561 | 3.4:-93434000 | None:intergenic |
| GGCCATTTAAAGCAGCACCA+GGG | 0.713591 | 3.4:-93432985 | None:intergenic |
| TGATGATGTTACATGTAAAG+GGG | 0.715942 | 3.4:-93432909 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAGCAATTTTTTTTTTTA+AGG | + | chr3.4:93433473-93433492 | MS.gene072913:intron | 10.0% |
| !!! | ATTAATTAAGTTTCTTTTTT+TGG | + | chr3.4:93433341-93433360 | MS.gene072913:intron | 10.0% |
| !!! | AAATTTATCATTTTGATTAC+AGG | + | chr3.4:93432858-93432877 | MS.gene072913:intron | 15.0% |
| !!! | AATTTATCATTTTGATTACA+GGG | + | chr3.4:93432859-93432878 | MS.gene072913:intron | 15.0% |
| !!! | ATATTTTTCAATGATTTATC+AGG | + | chr3.4:93433725-93433744 | MS.gene072913:intron | 15.0% |
| !! | AATATGTTAGAATAACTAGA+AGG | - | chr3.4:93432831-93432850 | None:intergenic | 20.0% |
| !! | TAAATCATTGAAAAATATCC+AGG | - | chr3.4:93433723-93433742 | None:intergenic | 20.0% |
| !! | TGTAAAGTATGATATGAAAA+AGG | + | chr3.4:93433950-93433969 | MS.gene072913:CDS | 20.0% |
| !!! | GCAATTTTTTTTTTTAAGGA+AGG | + | chr3.4:93433477-93433496 | MS.gene072913:intron | 20.0% |
| !!! | TGTAACATTTTTCTTTGAAA+TGG | + | chr3.4:93433392-93433411 | MS.gene072913:intron | 20.0% |
| !!! | TTCTTTTTCTGTATTTAGAT+CGG | + | chr3.4:93433137-93433156 | MS.gene072913:intron | 20.0% |
| ! | AAAATAGCTGAAATATCCAA+AGG | - | chr3.4:93433646-93433665 | None:intergenic | 25.0% |
| ! | AAATAGCTGAAATATCCAAA+GGG | - | chr3.4:93433645-93433664 | None:intergenic | 25.0% |
| ! | AGGAAGAAATAAAAAGAGTT+TGG | - | chr3.4:93432811-93432830 | None:intergenic | 25.0% |
| ! | GGAAGAAATAAAAAGAGTTT+GGG | - | chr3.4:93432810-93432829 | None:intergenic | 25.0% |
| AAATAACATGGCATGTCTAT+TGG | + | chr3.4:93433217-93433236 | MS.gene072913:intron | 30.0% | |
| AAGCAATCATGAAGAACTTA+CGG | - | chr3.4:93433260-93433279 | None:intergenic | 30.0% | |
| ATCATACTTTACAGACAAGA+AGG | - | chr3.4:93433943-93433962 | None:intergenic | 30.0% | |
| CAAATAGACAAGAACAACTA+GGG | - | chr3.4:93433587-93433606 | None:intergenic | 30.0% | |
| CCAATAATCAATTGCTATGT+AGG | - | chr3.4:93433435-93433454 | None:intergenic | 30.0% | |
| CCTACATAGCAATTGATTAT+TGG | + | chr3.4:93433432-93433451 | MS.gene072913:intron | 30.0% | |
| GTATAATTTGACCACTATCA+AGG | + | chr3.4:93433054-93433073 | MS.gene072913:CDS | 30.0% | |
| TTTCTGTATTTAGATCGGTT+TGG | + | chr3.4:93433142-93433161 | MS.gene072913:intron | 30.0% | |
| ! | AGAGTATTCTCATTACTATG+AGG | - | chr3.4:93433514-93433533 | None:intergenic | 30.0% |
| ! | GCATATTTTATGCGAGTTTT+AGG | - | chr3.4:93433563-93433582 | None:intergenic | 30.0% |
| ! | GTGATGATGTTACATGTAAA+GGG | - | chr3.4:93432913-93432932 | None:intergenic | 30.0% |
| ! | GTTCTTGTCTATTTGCATTT+TGG | + | chr3.4:93433592-93433611 | MS.gene072913:intron | 30.0% |
| ! | TGATGATGTTACATGTAAAG+GGG | - | chr3.4:93432912-93432931 | None:intergenic | 30.0% |
| ! | TGTGATGATGTTACATGTAA+AGG | - | chr3.4:93432914-93432933 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTTGGTTCAGACA+TGG | + | chr3.4:93433352-93433371 | MS.gene072913:intron | 30.0% |
| AAATCATCACCTTCATCCAA+GGG | + | chr3.4:93432710-93432729 | MS.gene072913:CDS | 35.0% | |
| ATATGAAAAAGGTTACTGCC+AGG | + | chr3.4:93433961-93433980 | MS.gene072913:CDS | 35.0% | |
| ATTTCCTGTTCCACTTGTAA+AGG | + | chr3.4:93432952-93432971 | MS.gene072913:CDS | 35.0% | |
| GAGAGTTCATGGAAATAACA+TGG | + | chr3.4:93433205-93433224 | MS.gene072913:intron | 35.0% | |
| GCAAATAGACAAGAACAACT+AGG | - | chr3.4:93433588-93433607 | None:intergenic | 35.0% | |
| GTACATAGTCTATTTCCATC+AGG | + | chr3.4:93433673-93433692 | MS.gene072913:intron | 35.0% | |
| TACAAAAGACCCTTTACAAG+TGG | - | chr3.4:93432965-93432984 | None:intergenic | 35.0% | |
| TATGAAAAAGGTTACTGCCA+GGG | + | chr3.4:93433962-93433981 | MS.gene072913:CDS | 35.0% | |
| TGGATCACTTCTTGTGATAT+GGG | + | chr3.4:93433821-93433840 | MS.gene072913:CDS | 35.0% | |
| TTGGATCACTTCTTGTGATA+TGG | + | chr3.4:93433820-93433839 | MS.gene072913:CDS | 35.0% | |
| TTTCCTGTTCCACTTGTAAA+GGG | + | chr3.4:93432953-93432972 | MS.gene072913:CDS | 35.0% | |
| ! | CTGGTCAAAGAAGGAATTTT+AGG | + | chr3.4:93433846-93433865 | MS.gene072913:CDS | 35.0% |
| !! | ACTTGTTATAAGGCAGATGA+AGG | - | chr3.4:93433622-93433641 | None:intergenic | 35.0% |
| !! | ATCCAAAGGGACTTGTTATA+AGG | - | chr3.4:93433632-93433651 | None:intergenic | 35.0% |
| AACTAGGAACAGTCATGTTG+TGG | - | chr3.4:93433015-93433034 | None:intergenic | 40.0% | |
| ACAACATGACTGTTCCTAGT+TGG | + | chr3.4:93433014-93433033 | MS.gene072913:CDS | 40.0% | |
| AGACTGTTTGAGAGAGTTCA+TGG | + | chr3.4:93433194-93433213 | MS.gene072913:intron | 40.0% | |
| ATCATGGCAAACACCATTGT+TGG | - | chr3.4:93433915-93433934 | None:intergenic | 40.0% | |
| ATGATTTATCAGGTCCTTGC+AGG | + | chr3.4:93433735-93433754 | MS.gene072913:intron | 40.0% | |
| CAACATGACTGTTCCTAGTT+GGG | + | chr3.4:93433015-93433034 | MS.gene072913:CDS | 40.0% | |
| CTATTTCCATCAGGTCTATG+CGG | + | chr3.4:93433682-93433701 | MS.gene072913:intron | 40.0% | |
| GAAATCATCACCTTCATCCA+AGG | + | chr3.4:93432709-93432728 | MS.gene072913:CDS | 40.0% | |
| GACTTTGATGAGCTCTTAAG+AGG | - | chr3.4:93434014-93434033 | None:intergenic | 40.0% | |
| GGATCACTTCTTGTGATATG+GGG | + | chr3.4:93433822-93433841 | MS.gene072913:CDS | 40.0% | |
| TATTTCCATCAGGTCTATGC+GGG | + | chr3.4:93433683-93433702 | MS.gene072913:intron | 40.0% | |
| TCATGGCAAACACCATTGTT+GGG | - | chr3.4:93433914-93433933 | None:intergenic | 40.0% | |
| TCCAAACATGCTCATTCTAC+CGG | - | chr3.4:93433805-93433824 | None:intergenic | 40.0% | |
| TCCAACAAACTATCCCAACT+AGG | - | chr3.4:93433031-93433050 | None:intergenic | 40.0% | |
| TGCCTTATAACAAGTCCCTT+TGG | + | chr3.4:93433627-93433646 | MS.gene072913:intron | 40.0% | |
| TTCGCAGGATCAGTATTTAC+TGG | - | chr3.4:93433876-93433895 | None:intergenic | 40.0% | |
| ! | AGACAAGAAGGCACATATCA+TGG | - | chr3.4:93433931-93433950 | None:intergenic | 40.0% |
| ! | CTTGGAAGATGATGATGAGT+AGG | - | chr3.4:93432769-93432788 | None:intergenic | 40.0% |
| ! | TCCTAGTTGGGATAGTTTGT+TGG | + | chr3.4:93433027-93433046 | MS.gene072913:CDS | 40.0% |
| !! | CTTGTTGGTATTCTGAAACC+CGG | + | chr3.4:93433783-93433802 | MS.gene072913:CDS | 40.0% |
| !! | TTTGGGAGTACCTGAAAAGA+GGG | - | chr3.4:93432793-93432812 | None:intergenic | 40.0% |
| ACTTCTTGTGATATGGGGAC+TGG | + | chr3.4:93433827-93433846 | MS.gene072913:CDS | 45.0% | |
| AGACCCTTTACAAGTGGAAC+AGG | - | chr3.4:93432959-93432978 | None:intergenic | 45.0% | |
| AGTAACCGATCTTCAACGCT+TGG | + | chr3.4:93433087-93433106 | MS.gene072913:CDS | 45.0% | |
| AGTACCTGAAAAGAGGGACT+TGG | - | chr3.4:93432787-93432806 | None:intergenic | 45.0% | |
| ATGTTCCATCCCTTGGATGA+AGG | - | chr3.4:93432722-93432741 | None:intergenic | 45.0% | |
| CCAAACATGCTCATTCTACC+GGG | - | chr3.4:93433804-93433823 | None:intergenic | 45.0% | |
| GAACAGTCATGTTGTGGATG+AGG | - | chr3.4:93433009-93433028 | None:intergenic | 45.0% | |
| GCTCTTAAGAGGTTTAGCAG+TGG | - | chr3.4:93434003-93434022 | None:intergenic | 45.0% | |
| TAAGAGGTTTAGCAGTGGAC+CGG | - | chr3.4:93433998-93434017 | None:intergenic | 45.0% | |
| TACAGGGTTACATGCAGATC+TGG | + | chr3.4:93432875-93432894 | MS.gene072913:intron | 45.0% | |
| TGAGGAAATGTTCCATCCCT+TGG | - | chr3.4:93432729-93432748 | None:intergenic | 45.0% | |
| TGCAGAAGCTTCCTTGATAG+TGG | - | chr3.4:93433068-93433087 | None:intergenic | 45.0% | |
| TGTCTACGTCTACCCAACAA+TGG | + | chr3.4:93433899-93433918 | MS.gene072913:CDS | 45.0% | |
| ! | GTAAAGGGTCTTTTGTACCC+TGG | + | chr3.4:93432968-93432987 | MS.gene072913:CDS | 45.0% |
| ! | TCTTCCAAGTCCCTCTTTTC+AGG | + | chr3.4:93432780-93432799 | MS.gene072913:CDS | 45.0% |
| !! | AACCTCCAAGCGTTGAAGAT+CGG | - | chr3.4:93433095-93433114 | None:intergenic | 45.0% |
| !! | ATATGGGGACTGGTCAAAGA+AGG | + | chr3.4:93433837-93433856 | MS.gene072913:CDS | 45.0% |
| !! | GTTTGGGAGTACCTGAAAAG+AGG | - | chr3.4:93432794-93432813 | None:intergenic | 45.0% |
| !! | TACCCTGGTGCTGCTTTAAA+TGG | + | chr3.4:93432983-93433002 | MS.gene072913:CDS | 45.0% |
| AACCGATCTTCAACGCTTGG+AGG | + | chr3.4:93433090-93433109 | MS.gene072913:CDS | 50.0% | |
| CATCACCTTCATCCAAGGGA+TGG | + | chr3.4:93432714-93432733 | MS.gene072913:CDS | 50.0% | |
| CCCGGTAGAATGAGCATGTT+TGG | + | chr3.4:93433801-93433820 | MS.gene072913:CDS | 50.0% | |
| CTGCAAAGTAGCTTCCTGCA+AGG | - | chr3.4:93433752-93433771 | None:intergenic | 50.0% | |
| GAAAAAGGTTACTGCCAGGG+CGG | + | chr3.4:93433965-93433984 | MS.gene072913:CDS | 50.0% | |
| TAGACGTAGACAGCTTTCGC+AGG | - | chr3.4:93433891-93433910 | None:intergenic | 50.0% | |
| ! | AGGCCATTTAAAGCAGCACC+AGG | - | chr3.4:93432989-93433008 | None:intergenic | 50.0% |
| ! | CGGGCACTTTTCAGTTAACC+TGG | + | chr3.4:93433702-93433721 | MS.gene072913:intron | 50.0% |
| ! | GGAAGCTACTTTGCAGTAGC+AGG | + | chr3.4:93433756-93433775 | MS.gene072913:CDS | 50.0% |
| ! | GGCCATTTAAAGCAGCACCA+GGG | - | chr3.4:93432988-93433007 | None:intergenic | 50.0% |
| AAGTGCCCGCATAGACCTGA+TGG | - | chr3.4:93433691-93433710 | None:intergenic | 55.0% | |
| GTAGATGCGTGCTGCGATTG+AGG | - | chr3.4:93432747-93432766 | None:intergenic | 55.0% | |
| GTTTAGCAGTGGACCGGACA+GGG | - | chr3.4:93433992-93434011 | None:intergenic | 55.0% | |
| TTTAGCAGTGGACCGGACAG+GGG | - | chr3.4:93433991-93434010 | None:intergenic | 55.0% | |
| !! | GCAGTAGCAGGAGCACTTGT+TGG | + | chr3.4:93433768-93433787 | MS.gene072913:CDS | 55.0% |
| GGTTTAGCAGTGGACCGGAC+AGG | - | chr3.4:93433993-93434012 | None:intergenic | 60.0% | |
| ! | CTGCCAGGGCGGCCCCTGTC+CGG | + | chr3.4:93433976-93433995 | MS.gene072913:CDS | 80.0% |
| ! | GGACCGGACAGGGGCCGCCC+TGG | - | chr3.4:93433982-93434001 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 93432686 | 93434046 | 93432686 | ID=MS.gene072913 |
| chr3.4 | mRNA | 93432686 | 93434046 | 93432686 | ID=MS.gene072913.t1;Parent=MS.gene072913 |
| chr3.4 | exon | 93432686 | 93432801 | 93432686 | ID=MS.gene072913.t1.exon1;Parent=MS.gene072913.t1 |
| chr3.4 | CDS | 93432686 | 93432801 | 93432686 | ID=cds.MS.gene072913.t1;Parent=MS.gene072913.t1 |
| chr3.4 | exon | 93432880 | 93433111 | 93432880 | ID=MS.gene072913.t1.exon2;Parent=MS.gene072913.t1 |
| chr3.4 | CDS | 93432880 | 93433111 | 93432880 | ID=cds.MS.gene072913.t1;Parent=MS.gene072913.t1 |
| chr3.4 | exon | 93433747 | 93434046 | 93433747 | ID=MS.gene072913.t1.exon3;Parent=MS.gene072913.t1 |
| chr3.4 | CDS | 93433747 | 93434046 | 93433747 | ID=cds.MS.gene072913.t1;Parent=MS.gene072913.t1 |
| Gene Sequence |
| Protein sequence |
