Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07318.t1 | RHN81020.1 | 97.3 | 480 | 13 | 0 | 1 | 480 | 60 | 539 | 4.40E-268 | 933.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07318.t1 | Q9FZ24 | 47.2 | 451 | 228 | 5 | 29 | 469 | 69 | 519 | 4.1e-113 | 409.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07318.t1 | G7ICW4 | 97.3 | 480 | 13 | 0 | 1 | 480 | 1 | 480 | 3.2e-268 | 933.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene07318 | 0.815359 | 9.62E-52 | -1.69E-46 |
| MS.gene050885 | MS.gene07318 | 0.811809 | 5.81E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene07318 | 0.803191 | 3.92E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene07318 | 0.810453 | 1.14E-50 | -1.69E-46 |
| MS.gene055586 | MS.gene07318 | 0.801563 | 8.49E-49 | -1.69E-46 |
| MS.gene055808 | MS.gene07318 | 0.80208 | 6.65E-49 | -1.69E-46 |
| MS.gene056403 | MS.gene07318 | 0.819728 | 9.97E-53 | -1.69E-46 |
| MS.gene056605 | MS.gene07318 | 0.840987 | 6.24E-58 | -1.69E-46 |
| MS.gene05689 | MS.gene07318 | 0.864766 | 9.60E-65 | -1.69E-46 |
| MS.gene059935 | MS.gene07318 | 0.854932 | 8.85E-62 | -1.69E-46 |
| MS.gene060830 | MS.gene07318 | 0.827485 | 1.52E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067938 | MS.gene07318 | PPI |
| MS.gene068108 | MS.gene07318 | PPI |
| MS.gene067932 | MS.gene07318 | PPI |
| MS.gene52807 | MS.gene07318 | PPI |
| MS.gene014383 | MS.gene07318 | PPI |
| MS.gene068115 | MS.gene07318 | PPI |
| MS.gene008872 | MS.gene07318 | PPI |
| MS.gene064795 | MS.gene07318 | PPI |
| MS.gene008863 | MS.gene07318 | PPI |
| MS.gene068116 | MS.gene07318 | PPI |
| MS.gene056432 | MS.gene07318 | PPI |
| MS.gene07318 | MS.gene008871 | PPI |
| MS.gene69362 | MS.gene07318 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07318.t1 | MTR_1g086820 | 97.292 | 480 | 13 | 0 | 1 | 480 | 1 | 480 | 0.0 | 972 |
| MS.gene07318.t1 | MTR_8g069570 | 38.377 | 456 | 265 | 7 | 40 | 480 | 29 | 483 | 2.12e-93 | 292 |
| MS.gene07318.t1 | MTR_2g013450 | 30.176 | 454 | 303 | 8 | 29 | 471 | 26 | 476 | 2.27e-62 | 211 |
| MS.gene07318.t1 | MTR_8g007375 | 32.884 | 371 | 246 | 3 | 93 | 460 | 7 | 377 | 1.80e-58 | 198 |
| MS.gene07318.t1 | MTR_1g072300 | 30.839 | 441 | 289 | 9 | 20 | 450 | 25 | 459 | 2.66e-56 | 195 |
| MS.gene07318.t1 | MTR_2g047855 | 30.189 | 424 | 280 | 8 | 13 | 430 | 19 | 432 | 4.09e-56 | 194 |
| MS.gene07318.t1 | MTR_8g465890 | 30.425 | 424 | 281 | 6 | 14 | 431 | 16 | 431 | 3.09e-55 | 192 |
| MS.gene07318.t1 | MTR_3g099753 | 29.252 | 441 | 295 | 8 | 20 | 450 | 26 | 459 | 9.16e-51 | 180 |
| MS.gene07318.t1 | MTR_3g099753 | 29.252 | 441 | 295 | 8 | 20 | 450 | 50 | 483 | 1.65e-50 | 180 |
| MS.gene07318.t1 | MTR_8g059115 | 28.696 | 345 | 244 | 2 | 100 | 442 | 13 | 357 | 4.26e-47 | 168 |
| MS.gene07318.t1 | MTR_2g090290 | 27.381 | 420 | 255 | 9 | 51 | 441 | 52 | 450 | 7.19e-42 | 155 |
| MS.gene07318.t1 | MTR_1g022400 | 30.241 | 291 | 199 | 4 | 46 | 332 | 69 | 359 | 2.10e-41 | 152 |
| MS.gene07318.t1 | MTR_8g031520 | 37.129 | 202 | 123 | 3 | 27 | 224 | 99 | 300 | 2.72e-31 | 122 |
| MS.gene07318.t1 | MTR_7g089770 | 23.810 | 399 | 286 | 12 | 38 | 430 | 163 | 549 | 2.19e-24 | 107 |
| MS.gene07318.t1 | MTR_1g050750 | 22.931 | 423 | 306 | 12 | 29 | 445 | 90 | 498 | 2.76e-22 | 100 |
| MS.gene07318.t1 | MTR_2g096880 | 23.197 | 319 | 241 | 4 | 17 | 333 | 30 | 346 | 8.27e-18 | 86.3 |
| MS.gene07318.t1 | MTR_8g098755 | 22.884 | 319 | 234 | 7 | 82 | 392 | 334 | 648 | 2.25e-12 | 69.7 |
| MS.gene07318.t1 | MTR_7g017530 | 29.213 | 178 | 122 | 3 | 130 | 304 | 283 | 459 | 1.57e-11 | 67.4 |
| MS.gene07318.t1 | MTR_8g080940 | 22.812 | 320 | 223 | 8 | 53 | 359 | 520 | 828 | 6.04e-11 | 65.5 |
| MS.gene07318.t1 | MTR_8g080940 | 22.812 | 320 | 223 | 8 | 53 | 359 | 722 | 1030 | 9.70e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07318.t1 | AT1G02370 | 43.160 | 519 | 245 | 6 | 1 | 469 | 1 | 519 | 2.17e-145 | 427 |
| MS.gene07318.t1 | AT4G01990 | 43.542 | 480 | 249 | 8 | 11 | 469 | 6 | 484 | 2.41e-128 | 382 |
| MS.gene07318.t1 | AT1G60770 | 37.069 | 464 | 271 | 10 | 33 | 480 | 25 | 483 | 1.10e-89 | 282 |
| MS.gene07318.t1 | AT1G02150 | 34.259 | 432 | 279 | 4 | 33 | 459 | 69 | 500 | 1.29e-76 | 249 |
| MS.gene07318.t1 | AT4G21705 | 31.818 | 418 | 281 | 4 | 29 | 442 | 23 | 440 | 1.42e-68 | 227 |
| MS.gene07318.t1 | AT2G20710 | 29.540 | 413 | 284 | 5 | 32 | 441 | 39 | 447 | 1.12e-57 | 198 |
| MS.gene07318.t1 | AT4G02820 | 29.895 | 475 | 305 | 9 | 8 | 470 | 41 | 499 | 4.23e-55 | 192 |
| MS.gene07318.t1 | AT5G27460 | 29.070 | 430 | 290 | 6 | 12 | 431 | 21 | 445 | 5.67e-53 | 186 |
| MS.gene07318.t1 | AT5G09450 | 31.056 | 322 | 216 | 5 | 25 | 340 | 49 | 370 | 2.60e-48 | 171 |
| MS.gene07318.t1 | AT2G20710 | 29.942 | 344 | 235 | 4 | 100 | 441 | 13 | 352 | 5.56e-47 | 167 |
| MS.gene07318.t1 | AT1G28020 | 28.267 | 329 | 231 | 5 | 36 | 359 | 41 | 369 | 3.93e-32 | 129 |
| MS.gene07318.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene07318.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene07318.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene07318.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene07318.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene07318.t1 | AT1G15480 | 25.205 | 365 | 261 | 9 | 43 | 402 | 138 | 495 | 3.93e-23 | 103 |
| MS.gene07318.t1 | AT3G15590 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.30e-22 | 101 |
| MS.gene07318.t1 | AT3G15590 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.30e-22 | 101 |
| MS.gene07318.t1 | AT1G07590 | 24.633 | 341 | 251 | 5 | 27 | 365 | 64 | 400 | 2.39e-19 | 91.3 |
| MS.gene07318.t1 | AT3G11380 | 26.780 | 295 | 180 | 6 | 66 | 355 | 78 | 341 | 8.38e-18 | 86.7 |
| MS.gene07318.t1 | AT3G11380 | 34.722 | 144 | 90 | 4 | 57 | 196 | 372 | 515 | 4.56e-12 | 68.6 |
| MS.gene07318.t1 | AT1G28000 | 24.567 | 289 | 210 | 6 | 13 | 293 | 13 | 301 | 1.29e-15 | 79.0 |
| MS.gene07318.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene07318.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene07318.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene07318.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene07318.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene07318.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene07318.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene07318.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene07318.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
Find 115 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAGGTTTGCCTTCTTATT+TGG | 0.179522 | 1.4:+69179600 | None:intergenic |
| GGGCATAATAAAATTGTTTA+AGG | 0.218164 | 1.4:-69177868 | MS.gene07318:CDS |
| AATTACGGCCGTTTGATTTC+CGG | 0.228375 | 1.4:-69179675 | MS.gene07318:CDS |
| TTTGATAAGATGGATGAATT+AGG | 0.262779 | 1.4:-69178374 | MS.gene07318:CDS |
| ATGAGTTAAGCAAGATTCTT+AGG | 0.291614 | 1.4:-69177533 | MS.gene07318:CDS |
| GGCATGTTAGTTATGATTCT+AGG | 0.296691 | 1.4:-69177833 | MS.gene07318:CDS |
| CCATATCATTAAGCCTTCTA+AGG | 0.308417 | 1.4:+69177892 | None:intergenic |
| TTATGCTTTCTAACCTTAGA+AGG | 0.314226 | 1.4:-69177905 | MS.gene07318:CDS |
| CTTTCCCTTCGATTATATAC+TGG | 0.317101 | 1.4:+69179523 | None:intergenic |
| GCTGCAGAGGACCTTTCTTT+AGG | 0.319713 | 1.4:-69177728 | MS.gene07318:CDS |
| AGGACCTTTCTTTAGGATTC+GGG | 0.341722 | 1.4:-69177721 | MS.gene07318:CDS |
| GAGGACCTTTCTTTAGGATT+CGG | 0.351526 | 1.4:-69177722 | MS.gene07318:CDS |
| TAGGATTCGGGAAATGTTCA+TGG | 0.370256 | 1.4:-69177709 | MS.gene07318:CDS |
| CCTTAGAAGGCTTAATGATA+TGG | 0.371817 | 1.4:-69177892 | MS.gene07318:CDS |
| TTCTTGCTGAGCCTTTATGC+TGG | 0.387794 | 1.4:-69178008 | MS.gene07318:CDS |
| CATATACATAGACATCAAAT+TGG | 0.389303 | 1.4:+69178328 | None:intergenic |
| TTTATTGGAGAAAGGTCAAT+TGG | 0.391224 | 1.4:-69177682 | MS.gene07318:CDS |
| GGAAGCTGTGTCGGTCTTTG+AGG | 0.399258 | 1.4:-69177763 | MS.gene07318:CDS |
| GTTGGTTGGTGTTGCAGTGC+AGG | 0.407651 | 1.4:-69177811 | MS.gene07318:CDS |
| GTTACAAATTCTCGTGGGCT+TGG | 0.417988 | 1.4:+69177412 | None:intergenic |
| GAAGAAGAAACAGATCTTGA+TGG | 0.427741 | 1.4:-69177561 | MS.gene07318:CDS |
| AATAAAATTGTTTAAGGAGT+GGG | 0.433563 | 1.4:-69177862 | MS.gene07318:CDS |
| TGTTTAAGGAGTGGGAATCT+AGG | 0.433657 | 1.4:-69177854 | MS.gene07318:CDS |
| TGGTGCTATGAGCCACTTAG+AGG | 0.441022 | 1.4:-69177658 | MS.gene07318:CDS |
| CATTACCAGTCCCAGCATAA+AGG | 0.447077 | 1.4:+69177997 | None:intergenic |
| TCAGTTGGTTAATGTTATGA+AGG | 0.448455 | 1.4:-69178279 | MS.gene07318:CDS |
| TCTTGCTGAGCCTTTATGCT+GGG | 0.452519 | 1.4:-69178007 | MS.gene07318:CDS |
| GATAGCTCCGATTGGTCACC+GGG | 0.462784 | 1.4:+69177931 | None:intergenic |
| CATAAAGGCTCAGCAAGAAA+TGG | 0.465952 | 1.4:+69178012 | None:intergenic |
| TTAAAGAGGTTTATAGAGTG+TGG | 0.469721 | 1.4:-69177974 | MS.gene07318:CDS |
| ATTTGATGTCTATGTATATG+AGG | 0.470560 | 1.4:-69178325 | MS.gene07318:CDS |
| CGTCTGCGACACGGTTCCTC+CGG | 0.470565 | 1.4:+69179551 | None:intergenic |
| TTTCTAGGTCGGCTAGTCTT+CGG | 0.471475 | 1.4:+69179577 | None:intergenic |
| GCACTTACAGCTTGTGGTGA+AGG | 0.473435 | 1.4:+69177600 | None:intergenic |
| TGGTATTCATACAGTATTGA+AGG | 0.474569 | 1.4:-69177451 | MS.gene07318:CDS |
| TATGTGTACTTGTTCTTAGC+AGG | 0.476882 | 1.4:+69178455 | None:intergenic |
| GTTTGATTTCCGGCGGAGGA+AGG | 0.482051 | 1.4:-69179665 | MS.gene07318:CDS |
| AGAGACTCTGAGATGAATTA+CGG | 0.482119 | 1.4:-69179690 | None:intergenic |
| TAAAGAGGTTTATAGAGTGT+GGG | 0.486756 | 1.4:-69177973 | MS.gene07318:CDS |
| CTGAGCCTTTATGCTGGGAC+TGG | 0.488058 | 1.4:-69178002 | MS.gene07318:CDS |
| AGTTATGATTCTAGGTTGGT+TGG | 0.491947 | 1.4:-69177825 | MS.gene07318:CDS |
| ATAATCGAAGGGAAAGCCTT+AGG | 0.492451 | 1.4:-69179516 | MS.gene07318:CDS |
| TTCAACCACTCCTTTCACTT+TGG | 0.493231 | 1.4:+69178508 | None:intergenic |
| TACGATACTTTCGAAGCTCC+TGG | 0.493561 | 1.4:+69179469 | None:intergenic |
| CACCGGGGTGATCTTCTTGA+GGG | 0.494822 | 1.4:+69177947 | None:intergenic |
| TGTGCTGCTTTGAATGACCT+TGG | 0.495240 | 1.4:-69178206 | MS.gene07318:CDS |
| ATGAATACCAGGAGATGATT+CGG | 0.497054 | 1.4:+69177464 | None:intergenic |
| GGCCGTTTGATTTCCGGCGG+AGG | 0.498441 | 1.4:-69179669 | MS.gene07318:CDS |
| TCGGAGAAGCCTTCCTCCGC+CGG | 0.500205 | 1.4:+69179656 | None:intergenic |
| AGATCACCCCGGTGACCAAT+CGG | 0.504230 | 1.4:-69177938 | MS.gene07318:CDS |
| TGAACTCGAGAGATGCGTCC+AGG | 0.504375 | 1.4:-69179487 | MS.gene07318:CDS |
| GCTGCTATCTATATAAAAGC+TGG | 0.505469 | 1.4:-69178107 | MS.gene07318:CDS |
| TTCCTCCGCCGGAAATCAAA+CGG | 0.507328 | 1.4:+69179667 | None:intergenic |
| GGTCGGCTAGTCTTCGGTAA+AGG | 0.515798 | 1.4:+69179583 | None:intergenic |
| TGAGGTTGAACGTGTTTATG+AGG | 0.516026 | 1.4:-69178183 | MS.gene07318:CDS |
| TGTTAGTTATGATTCTAGGT+TGG | 0.519722 | 1.4:-69177829 | MS.gene07318:CDS |
| AAGATGAAGACAAAATTGAC+TGG | 0.525053 | 1.4:-69178148 | MS.gene07318:CDS |
| TACTTGTTCTTAGCAGGAGG+AGG | 0.531968 | 1.4:+69178461 | None:intergenic |
| TGGGACTGGTAATGTTAAAG+AGG | 0.532622 | 1.4:-69177988 | MS.gene07318:CDS |
| AGATAGCTCCGATTGGTCAC+CGG | 0.533726 | 1.4:+69177930 | None:intergenic |
| ATTTCCCGAATCCTAAAGAA+AGG | 0.537745 | 1.4:+69177717 | None:intergenic |
| TGCTTTGAATGACCTTGGTG+AGG | 0.538207 | 1.4:-69178201 | MS.gene07318:CDS |
| TCACCGGGGTGATCTTCTTG+AGG | 0.539174 | 1.4:+69177946 | None:intergenic |
| TTGGAGAAAGGTCAATTGGA+TGG | 0.539563 | 1.4:-69177678 | MS.gene07318:CDS |
| AGAAAAGCACTTACAGCTTG+TGG | 0.542366 | 1.4:+69177594 | None:intergenic |
| AAAGAGGTTTATAGAGTGTG+GGG | 0.547043 | 1.4:-69177972 | MS.gene07318:CDS |
| GAAGCTCTCAAGAGCTGCAG+AGG | 0.547848 | 1.4:-69177741 | MS.gene07318:CDS |
| AGCTGAGCTTCCAAATAAGA+AGG | 0.548369 | 1.4:-69179610 | MS.gene07318:CDS |
| GATCTTGTGTCCAAAGTGAA+AGG | 0.549809 | 1.4:-69178518 | MS.gene07318:CDS |
| ACTGCATCCGAATCATCTCC+TGG | 0.552993 | 1.4:-69177471 | MS.gene07318:CDS |
| AGAAATGGTAAGTTTCGCGT+TGG | 0.553517 | 1.4:+69178027 | None:intergenic |
| TTACAGCTTGTGGTGAAGGT+TGG | 0.556374 | 1.4:+69177604 | None:intergenic |
| TAATAAAATTGTTTAAGGAG+TGG | 0.559489 | 1.4:-69177863 | MS.gene07318:CDS |
| TTCAATACTGTATGAATACC+AGG | 0.559830 | 1.4:+69177453 | None:intergenic |
| TCCCAAGTTACAAATTCTCG+TGG | 0.560694 | 1.4:+69177406 | None:intergenic |
| TTGAACCAGTATATAATCGA+AGG | 0.561352 | 1.4:-69179528 | MS.gene07318:CDS |
| ATTGGTTGCAGATAATGGAA+TGG | 0.561950 | 1.4:-69178592 | MS.gene07318:intron |
| AGCTGAGTTGATGCTTAAGA+AGG | 0.568467 | 1.4:-69178072 | MS.gene07318:CDS |
| TGGTAAGTTTCGCGTTGGCG+CGG | 0.569478 | 1.4:+69178032 | None:intergenic |
| CTGAAAGTGCGGCCTCTAAG+TGG | 0.571070 | 1.4:+69177646 | None:intergenic |
| ATGTCTATGTATATGAGGCT+AGG | 0.571867 | 1.4:-69178320 | MS.gene07318:CDS |
| TAGATTCCATCATGCATTCG+AGG | 0.573744 | 1.4:-69179448 | MS.gene07318:intron |
| CATGGACAAGGAAGCTGTGT+CGG | 0.574022 | 1.4:-69177772 | MS.gene07318:CDS |
| CTGGTTCAACGTCTGCGACA+CGG | 0.577943 | 1.4:+69179542 | None:intergenic |
| ACCGTCGAAAGTTCCTCAGT+TGG | 0.578763 | 1.4:-69178294 | MS.gene07318:CDS |
| ACGACTATGCACGGCTGCGA+CGG | 0.581337 | 1.4:-69179634 | MS.gene07318:CDS |
| TAGAAGGCTTAATGATATGG+AGG | 0.581977 | 1.4:-69177889 | MS.gene07318:CDS |
| GAGGCCGCACTTTCAGAAGT+CGG | 0.583270 | 1.4:-69177639 | MS.gene07318:CDS |
| ACCAACTGAGGAACTTTCGA+CGG | 0.585028 | 1.4:+69178293 | None:intergenic |
| CATAATAAGATAGCTCCGAT+TGG | 0.585163 | 1.4:+69177923 | None:intergenic |
| GCGATACCTCGAATGCATGA+TGG | 0.585983 | 1.4:+69179442 | None:intergenic |
| GTGTACTTGTTCTTAGCAGG+AGG | 0.589015 | 1.4:+69178458 | None:intergenic |
| TGGTTAATGTTATGAAGGAG+AGG | 0.593769 | 1.4:-69178274 | MS.gene07318:CDS |
| TTCATAACATTAACCAACTG+AGG | 0.600464 | 1.4:+69178281 | None:intergenic |
| AGAAGGCTTAATGATATGGA+GGG | 0.604451 | 1.4:-69177888 | MS.gene07318:CDS |
| GCTAAGAACAAGTACACATA+CGG | 0.606065 | 1.4:-69178452 | MS.gene07318:CDS |
| TCTTCTAAACTGTTACTGCA+AGG | 0.614146 | 1.4:-69178426 | MS.gene07318:CDS |
| TACGGCCGTTTGATTTCCGG+CGG | 0.616646 | 1.4:-69179672 | MS.gene07318:CDS |
| GGCTTACTTGAGTCAAAACA+TGG | 0.616784 | 1.4:-69177790 | MS.gene07318:CDS |
| CCCAAGTTACAAATTCTCGT+GGG | 0.622015 | 1.4:+69177407 | None:intergenic |
| CTTGAGTCAAAACATGGACA+AGG | 0.623542 | 1.4:-69177784 | MS.gene07318:CDS |
| AAGAGGTTTATAGAGTGTGG+GGG | 0.627275 | 1.4:-69177971 | MS.gene07318:CDS |
| TGAACCAGTATATAATCGAA+GGG | 0.630767 | 1.4:-69179527 | MS.gene07318:CDS |
| TCGCAGCCGTGCATAGTCGT+CGG | 0.630947 | 1.4:+69179637 | None:intergenic |
| CTAGCCGACCTAGAAAAGAC+CGG | 0.635101 | 1.4:-69179570 | MS.gene07318:CDS |
| TGAGTTGATGCTTAAGAAGG+TGG | 0.644162 | 1.4:-69178069 | MS.gene07318:CDS |
| TAATGGAATGGATGATGATG+AGG | 0.652324 | 1.4:-69178580 | MS.gene07318:CDS |
| CAAGGAACTAATGCTAGACA+AGG | 0.652550 | 1.4:-69178408 | MS.gene07318:CDS |
| GACCCTCAAGAAGATCACCC+CGG | 0.654594 | 1.4:-69177949 | MS.gene07318:CDS |
| ATCGCCGACTTCTGAAAGTG+CGG | 0.674194 | 1.4:+69177635 | None:intergenic |
| GCTTCTCCGACGACTATGCA+CGG | 0.690136 | 1.4:-69179643 | MS.gene07318:CDS |
| GCCGACCTAGAAAAGACCGG+AGG | 0.743237 | 1.4:-69179567 | MS.gene07318:CDS |
| TGTGTCCAAAGTGAAAGGAG+TGG | 0.764655 | 1.4:-69178513 | MS.gene07318:CDS |
| AAACACGTTCAACCTCACCA+AGG | 0.766259 | 1.4:+69178189 | None:intergenic |
| ATAGCTCCGATTGGTCACCG+GGG | 0.806286 | 1.4:+69177932 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAATGATGTTTTGAT+TGG | - | chr1.4:69178481-69178500 | MS.gene07318:CDS | 15.0% |
| !! | AATAAAATTGTTTAAGGAGT+GGG | - | chr1.4:69179229-69179248 | MS.gene07318:intron | 20.0% |
| !! | AGATTTAAAGATTAACAAGT+TGG | - | chr1.4:69178329-69178348 | MS.gene07318:CDS | 20.0% |
| !! | TAATAAAATTGTTTAAGGAG+TGG | - | chr1.4:69179228-69179247 | MS.gene07318:intron | 20.0% |
| !! | TCAACATGAATCAAAATTTA+GGG | + | chr1.4:69177697-69177716 | None:intergenic | 20.0% |
| !! | TTGTTAATAAATGAATCAAC+TGG | - | chr1.4:69177948-69177967 | MS.gene07318:CDS | 20.0% |
| ! | AAAATTAGTTAGAGTCGTTT+AGG | + | chr1.4:69177794-69177813 | None:intergenic | 25.0% |
| ! | ACTAATTATGTTCTGTGTAA+TGG | - | chr1.4:69177912-69177931 | MS.gene07318:CDS | 25.0% |
| ! | ATTTGATGTCTATGTATATG+AGG | - | chr1.4:69178766-69178785 | MS.gene07318:intron | 25.0% |
| ! | CATATACATAGACATCAAAT+TGG | + | chr1.4:69178766-69178785 | None:intergenic | 25.0% |
| ! | CTCAACATGAATCAAAATTT+AGG | + | chr1.4:69177698-69177717 | None:intergenic | 25.0% |
| ! | GGGCATAATAAAATTGTTTA+AGG | - | chr1.4:69179223-69179242 | MS.gene07318:intron | 25.0% |
| ! | TAGTATATGATAGAACACTA+TGG | - | chr1.4:69178361-69178380 | MS.gene07318:CDS | 25.0% |
| ! | TTATATAGTAGTCACAAGAT+CGG | - | chr1.4:69178013-69178032 | MS.gene07318:CDS | 25.0% |
| ! | TTTGATAAGATGGATGAATT+AGG | - | chr1.4:69178717-69178736 | MS.gene07318:intron | 25.0% |
| !! | AAAGATTAACAAGTTGGATA+GGG | - | chr1.4:69178335-69178354 | MS.gene07318:CDS | 25.0% |
| !! | AAATTTAGGGTGGAAAAAAT+TGG | + | chr1.4:69177684-69177703 | None:intergenic | 25.0% |
| !! | CTGAATTTACATACATTTTG+TGG | - | chr1.4:69178853-69178872 | MS.gene07318:intron | 25.0% |
| !! | GAGGCAAATTAATTTTTCAT+GGG | - | chr1.4:69178530-69178549 | MS.gene07318:CDS | 25.0% |
| !! | TAAAGATTAACAAGTTGGAT+AGG | - | chr1.4:69178334-69178353 | MS.gene07318:CDS | 25.0% |
| !! | TGAGGCAAATTAATTTTTCA+TGG | - | chr1.4:69178529-69178548 | MS.gene07318:CDS | 25.0% |
| !!! | AATGTTCATGGTGTTTTTAT+TGG | - | chr1.4:69179394-69179413 | MS.gene07318:intron | 25.0% |
| !!! | AGTAATGCAAGTTTTAATAG+AGG | + | chr1.4:69179603-69179622 | None:intergenic | 25.0% |
| !!! | ATTGTCTCATTTTGATAAGA+TGG | - | chr1.4:69178707-69178726 | MS.gene07318:intron | 25.0% |
| !!! | TTTACCATCTTTTTTACGAT+AGG | + | chr1.4:69178171-69178190 | None:intergenic | 25.0% |
| AAGATGAAGACAAAATTGAC+TGG | - | chr1.4:69178943-69178962 | MS.gene07318:intron | 30.0% | |
| ACATGAATCAAAATTTAGGG+TGG | + | chr1.4:69177694-69177713 | None:intergenic | 30.0% | |
| ATGACAATATTAGAGAGAGT+TGG | - | chr1.4:69178138-69178157 | MS.gene07318:CDS | 30.0% | |
| ATGAGTTAAGCAAGATTCTT+AGG | - | chr1.4:69179558-69179577 | MS.gene07318:CDS | 30.0% | |
| TAAAGAGGTTTATAGAGTGT+GGG | - | chr1.4:69179118-69179137 | MS.gene07318:intron | 30.0% | |
| TAAAGGTTTGCCTTCTTATT+TGG | + | chr1.4:69177494-69177513 | None:intergenic | 30.0% | |
| TCAGTTGGTTAATGTTATGA+AGG | - | chr1.4:69178812-69178831 | MS.gene07318:intron | 30.0% | |
| TGAACCAGTATATAATCGAA+GGG | - | chr1.4:69177564-69177583 | MS.gene07318:CDS | 30.0% | |
| TGACAATATTAGAGAGAGTT+GGG | - | chr1.4:69178139-69178158 | MS.gene07318:CDS | 30.0% | |
| TGATGATAAACTATGAAGCA+TGG | + | chr1.4:69177872-69177891 | None:intergenic | 30.0% | |
| TGTTAGTTATGATTCTAGGT+TGG | - | chr1.4:69179262-69179281 | MS.gene07318:intron | 30.0% | |
| TTAAAGAGGTTTATAGAGTG+TGG | - | chr1.4:69179117-69179136 | MS.gene07318:intron | 30.0% | |
| TTATGCTTTCTAACCTTAGA+AGG | - | chr1.4:69179186-69179205 | MS.gene07318:intron | 30.0% | |
| TTCAATACTGTATGAATACC+AGG | + | chr1.4:69179641-69179660 | None:intergenic | 30.0% | |
| TTCATAACATTAACCAACTG+AGG | + | chr1.4:69178813-69178832 | None:intergenic | 30.0% | |
| TTGAACCAGTATATAATCGA+AGG | - | chr1.4:69177563-69177582 | MS.gene07318:CDS | 30.0% | |
| TTTATTGGAGAAAGGTCAAT+TGG | - | chr1.4:69179409-69179428 | MS.gene07318:intron | 30.0% | |
| ! | ACATACATTTTGTGGATGAA+TGG | - | chr1.4:69178861-69178880 | MS.gene07318:intron | 30.0% |
| ! | AGATGGTAAAAGTTTGACTT+AGG | - | chr1.4:69178181-69178200 | MS.gene07318:CDS | 30.0% |
| ! | CTTTTATATAGATAGCAGCA+AGG | + | chr1.4:69178983-69179002 | None:intergenic | 30.0% |
| ! | TGGTATTCATACAGTATTGA+AGG | - | chr1.4:69179640-69179659 | MS.gene07318:CDS | 30.0% |
| !! | ATGGTGTTTTTATTGGAGAA+AGG | - | chr1.4:69179401-69179420 | MS.gene07318:intron | 30.0% |
| !! | TTTTGATTGGTTGCAGATAA+TGG | - | chr1.4:69178494-69178513 | MS.gene07318:CDS | 30.0% |
| !!! | AATTAGTTTTGCCTTGTCTA+TGG | + | chr1.4:69177899-69177918 | None:intergenic | 30.0% |
| !!! | CGCTTATTTTATTCTCATGT+TGG | + | chr1.4:69178065-69178084 | None:intergenic | 30.0% |
| AAAGAGGTTTATAGAGTGTG+GGG | - | chr1.4:69179119-69179138 | MS.gene07318:intron | 35.0% | |
| AGAAGGCTTAATGATATGGA+GGG | - | chr1.4:69179203-69179222 | MS.gene07318:intron | 35.0% | |
| AGCACCTATCGTAAAAAAGA+TGG | - | chr1.4:69178164-69178183 | MS.gene07318:CDS | 35.0% | |
| ATCATCACAATCCATAGACA+AGG | - | chr1.4:69177885-69177904 | MS.gene07318:CDS | 35.0% | |
| ATGAATACCAGGAGATGATT+CGG | + | chr1.4:69179630-69179649 | None:intergenic | 35.0% | |
| ATGTCTATGTATATGAGGCT+AGG | - | chr1.4:69178771-69178790 | MS.gene07318:intron | 35.0% | |
| ATTTCCCGAATCCTAAAGAA+AGG | + | chr1.4:69179377-69179396 | None:intergenic | 35.0% | |
| CATAATAAGATAGCTCCGAT+TGG | + | chr1.4:69179171-69179190 | None:intergenic | 35.0% | |
| CCATATCATTAAGCCTTCTA+AGG | + | chr1.4:69179202-69179221 | None:intergenic | 35.0% | |
| CCTTAGAAGGCTTAATGATA+TGG | - | chr1.4:69179199-69179218 | MS.gene07318:intron | 35.0% | |
| CTTTCCCTTCGATTATATAC+TGG | + | chr1.4:69177571-69177590 | None:intergenic | 35.0% | |
| GAAGAAGAAACAGATCTTGA+TGG | - | chr1.4:69179530-69179549 | MS.gene07318:CDS | 35.0% | |
| GCTAAGAACAAGTACACATA+CGG | - | chr1.4:69178639-69178658 | MS.gene07318:intron | 35.0% | |
| GCTGCTATCTATATAAAAGC+TGG | - | chr1.4:69178984-69179003 | MS.gene07318:intron | 35.0% | |
| GGCATGTTAGTTATGATTCT+AGG | - | chr1.4:69179258-69179277 | MS.gene07318:intron | 35.0% | |
| TAGAAGGCTTAATGATATGG+AGG | - | chr1.4:69179202-69179221 | MS.gene07318:intron | 35.0% | |
| TATGTGTACTTGTTCTTAGC+AGG | + | chr1.4:69178639-69178658 | None:intergenic | 35.0% | |
| TCTTCTAAACTGTTACTGCA+AGG | - | chr1.4:69178665-69178684 | MS.gene07318:intron | 35.0% | |
| TGGTTAATGTTATGAAGGAG+AGG | - | chr1.4:69178817-69178836 | MS.gene07318:intron | 35.0% | |
| ! | AAATGAATCAACTGGCTTAG+TGG | - | chr1.4:69177956-69177975 | MS.gene07318:CDS | 35.0% |
| ! | CAAGTCTTATCCCACTAATT+GGG | + | chr1.4:69178411-69178430 | None:intergenic | 35.0% |
| ! | GACCTGTAGATTTTGTAGTA+CGG | - | chr1.4:69178226-69178245 | MS.gene07318:CDS | 35.0% |
| ! | TAATGGAATGGATGATGATG+AGG | - | chr1.4:69178511-69178530 | MS.gene07318:CDS | 35.0% |
| ! | TGGTAAAAGTTTGACTTAGG+TGG | - | chr1.4:69178184-69178203 | MS.gene07318:CDS | 35.0% |
| !! | AGTTATGATTCTAGGTTGGT+TGG | - | chr1.4:69179266-69179285 | MS.gene07318:intron | 35.0% |
| !! | ATTGGTTGCAGATAATGGAA+TGG | - | chr1.4:69178499-69178518 | MS.gene07318:CDS | 35.0% |
| AAGAGGTTTATAGAGTGTGG+GGG | - | chr1.4:69179120-69179139 | MS.gene07318:intron | 40.0% | |
| ACAAGATCGGTGATGTTGTA+TGG | - | chr1.4:69178026-69178045 | MS.gene07318:CDS | 40.0% | |
| AGAAATGGTAAGTTTCGCGT+TGG | + | chr1.4:69179067-69179086 | None:intergenic | 40.0% | |
| AGCTGAGCTTCCAAATAAGA+AGG | - | chr1.4:69177481-69177500 | MS.gene07318:CDS | 40.0% | |
| ATAATCGAAGGGAAAGCCTT+AGG | - | chr1.4:69177575-69177594 | MS.gene07318:CDS | 40.0% | |
| CAAGGAACTAATGCTAGACA+AGG | - | chr1.4:69178683-69178702 | MS.gene07318:intron | 40.0% | |
| CATAAAGGCTCAGCAAGAAA+TGG | + | chr1.4:69179082-69179101 | None:intergenic | 40.0% | |
| CCAATTAGTGGGATAAGACT+TGG | - | chr1.4:69178409-69178428 | MS.gene07318:CDS | 40.0% | |
| CTCCGTACTACAAAATCTAC+AGG | + | chr1.4:69178231-69178250 | None:intergenic | 40.0% | |
| CTTATCCCACTAATTGGGAT+CGG | + | chr1.4:69178406-69178425 | None:intergenic | 40.0% | |
| CTTGAGTCAAAACATGGACA+AGG | - | chr1.4:69179307-69179326 | MS.gene07318:intron | 40.0% | |
| GATCTTGTGTCCAAAGTGAA+AGG | - | chr1.4:69178573-69178592 | MS.gene07318:CDS | 40.0% | |
| GGCTTACTTGAGTCAAAACA+TGG | - | chr1.4:69179301-69179320 | MS.gene07318:intron | 40.0% | |
| TAGATTCCATCATGCATTCG+AGG | - | chr1.4:69177643-69177662 | MS.gene07318:CDS | 40.0% | |
| TAGGATTCGGGAAATGTTCA+TGG | - | chr1.4:69179382-69179401 | MS.gene07318:intron | 40.0% | |
| TGAGGTTGAACGTGTTTATG+AGG | - | chr1.4:69178908-69178927 | MS.gene07318:intron | 40.0% | |
| TGATTTGACTAACCTCCATC+TGG | + | chr1.4:69178260-69178279 | None:intergenic | 40.0% | |
| TGTTTAAGGAGTGGGAATCT+AGG | - | chr1.4:69179237-69179256 | MS.gene07318:intron | 40.0% | |
| TTCAACCACTCCTTTCACTT+TGG | + | chr1.4:69178586-69178605 | None:intergenic | 40.0% | |
| TTGGAGAAAGGTCAATTGGA+TGG | - | chr1.4:69179413-69179432 | MS.gene07318:intron | 40.0% | |
| ! | AAAGTACCACTCAAGCTGAA+GGG | - | chr1.4:69177986-69178005 | MS.gene07318:CDS | 40.0% |
| ! | AAGTTTGACTTAGGTGGTCT+AGG | - | chr1.4:69178190-69178209 | MS.gene07318:CDS | 40.0% |
| ! | AATTACGGCCGTTTGATTTC+CGG | - | chr1.4:69177416-69177435 | MS.gene07318:CDS | 40.0% |
| ! | CCAAGTCTTATCCCACTAAT+TGG | + | chr1.4:69178412-69178431 | None:intergenic | 40.0% |
| ! | CTCGAGTTCATCTTTTCCTA+AGG | + | chr1.4:69177594-69177613 | None:intergenic | 40.0% |
| ! | GAGGTTAGTCAAATCACTTG+AGG | - | chr1.4:69178264-69178283 | MS.gene07318:CDS | 40.0% |
| ! | TAAAGTACCACTCAAGCTGA+AGG | - | chr1.4:69177985-69178004 | MS.gene07318:CDS | 40.0% |
| ! | TGGGACTGGTAATGTTAAAG+AGG | - | chr1.4:69179103-69179122 | MS.gene07318:intron | 40.0% |
| !! | AGAAAAGCACTTACAGCTTG+TGG | + | chr1.4:69179500-69179519 | None:intergenic | 40.0% |
| !! | AGCTGAGTTGATGCTTAAGA+AGG | - | chr1.4:69179019-69179038 | MS.gene07318:intron | 40.0% |
| !! | AGGACCTTTCTTTAGGATTC+GGG | - | chr1.4:69179370-69179389 | MS.gene07318:intron | 40.0% |
| !! | GAGGACCTTTCTTTAGGATT+CGG | - | chr1.4:69179369-69179388 | MS.gene07318:intron | 40.0% |
| !! | GTAACATCGACTCTGATTGA+AGG | - | chr1.4:69177733-69177752 | MS.gene07318:CDS | 40.0% |
| !! | TGAGTTGATGCTTAAGAAGG+TGG | - | chr1.4:69179022-69179041 | MS.gene07318:intron | 40.0% |
| AAACACGTTCAACCTCACCA+AGG | + | chr1.4:69178905-69178924 | None:intergenic | 45.0% | |
| AATTGTCCCTTCAGCTTGAG+TGG | + | chr1.4:69177995-69178014 | None:intergenic | 45.0% | |
| ACCAACTGAGGAACTTTCGA+CGG | + | chr1.4:69178801-69178820 | None:intergenic | 45.0% | |
| ACTAATTGGGATCGGCTACA+TGG | + | chr1.4:69178398-69178417 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | - | chr1.4:69178096-69178115 | MS.gene07318:CDS | 45.0% | |
| AGTCAAATCACTTGAGGCAG+AGG | - | chr1.4:69178270-69178289 | MS.gene07318:CDS | 45.0% | |
| ATGTAGCCGATCCCAATTAG+TGG | - | chr1.4:69178397-69178416 | MS.gene07318:CDS | 45.0% | |
| CATTACCAGTCCCAGCATAA+AGG | + | chr1.4:69179097-69179116 | None:intergenic | 45.0% | |
| GTGTACTTGTTCTTAGCAGG+AGG | + | chr1.4:69178636-69178655 | None:intergenic | 45.0% | |
| TACGATACTTTCGAAGCTCC+TGG | + | chr1.4:69177625-69177644 | None:intergenic | 45.0% | |
| TACTTGTTCTTAGCAGGAGG+AGG | + | chr1.4:69178633-69178652 | None:intergenic | 45.0% | |
| TCTTGCTGAGCCTTTATGCT+GGG | - | chr1.4:69179084-69179103 | MS.gene07318:intron | 45.0% | |
| TGTAGCCGATCCCAATTAGT+GGG | - | chr1.4:69178398-69178417 | MS.gene07318:CDS | 45.0% | |
| TGTGTCCAAAGTGAAAGGAG+TGG | - | chr1.4:69178578-69178597 | MS.gene07318:CDS | 45.0% | |
| TTACAGCTTGTGGTGAAGGT+TGG | + | chr1.4:69179490-69179509 | None:intergenic | 45.0% | |
| TTCTTGCTGAGCCTTTATGC+TGG | - | chr1.4:69179083-69179102 | MS.gene07318:intron | 45.0% | |
| ! | AGTGGGATAAGACTTGGTTG+TGG | - | chr1.4:69178415-69178434 | MS.gene07318:CDS | 45.0% |
| ! | TGCTTTGAATGACCTTGGTG+AGG | - | chr1.4:69178890-69178909 | MS.gene07318:intron | 45.0% |
| !! | TGTGCTGCTTTGAATGACCT+TGG | - | chr1.4:69178885-69178904 | MS.gene07318:intron | 45.0% |
| !! | TTTCTAGGTCGGCTAGTCTT+CGG | + | chr1.4:69177517-69177536 | None:intergenic | 45.0% |
| AAATAAGCGTAGCCGAGACG+AGG | - | chr1.4:69178076-69178095 | MS.gene07318:CDS | 50.0% | |
| ACCGTCGAAAGTTCCTCAGT+TGG | - | chr1.4:69178797-69178816 | MS.gene07318:intron | 50.0% | |
| ACTGCATCCGAATCATCTCC+TGG | - | chr1.4:69179620-69179639 | MS.gene07318:CDS | 50.0% | |
| AGTACGGAGAGTAGACCAGA+TGG | - | chr1.4:69178242-69178261 | MS.gene07318:CDS | 50.0% | |
| CATGGACAAGGAAGCTGTGT+CGG | - | chr1.4:69179319-69179338 | MS.gene07318:intron | 50.0% | |
| CCAACACAACATCCTCGTCT+CGG | + | chr1.4:69178091-69178110 | None:intergenic | 50.0% | |
| CTAGCCGACCTAGAAAAGAC+CGG | - | chr1.4:69177521-69177540 | MS.gene07318:CDS | 50.0% | |
| GCACTTACAGCTTGTGGTGA+AGG | + | chr1.4:69179494-69179513 | None:intergenic | 50.0% | |
| GCGATACCTCGAATGCATGA+TGG | + | chr1.4:69177652-69177671 | None:intergenic | 50.0% | |
| GCTGCAGAGGACCTTTCTTT+AGG | - | chr1.4:69179363-69179382 | MS.gene07318:intron | 50.0% | |
| GTCGTTTAGGTGTCAGACAC+CGG | + | chr1.4:69177781-69177800 | None:intergenic | 50.0% | |
| TTCCTCCGCCGGAAATCAAA+CGG | + | chr1.4:69177427-69177446 | None:intergenic | 50.0% | |
| ! | AGATAGCTCCGATTGGTCAC+CGG | + | chr1.4:69179164-69179183 | None:intergenic | 50.0% |
| ! | TCCTCCGGTCTTTTCTAGGT+CGG | + | chr1.4:69177528-69177547 | None:intergenic | 50.0% |
| !! | ATCGCCGACTTCTGAAAGTG+CGG | + | chr1.4:69179459-69179478 | None:intergenic | 50.0% |
| !! | TGGTGCTATGAGCCACTTAG+AGG | - | chr1.4:69179433-69179452 | MS.gene07318:intron | 50.0% |
| ACGGAGAGTAGACCAGATGG+AGG | - | chr1.4:69178245-69178264 | MS.gene07318:CDS | 55.0% | |
| AGATCACCCCGGTGACCAAT+CGG | - | chr1.4:69179153-69179172 | MS.gene07318:intron | 55.0% | |
| CACCGGGGTGATCTTCTTGA+GGG | + | chr1.4:69179147-69179166 | None:intergenic | 55.0% | |
| CCGAGACGAGGATGTTGTGT+TGG | - | chr1.4:69178088-69178107 | MS.gene07318:CDS | 55.0% | |
| CTGAGCCTTTATGCTGGGAC+TGG | - | chr1.4:69179089-69179108 | MS.gene07318:intron | 55.0% | |
| CTGGTTCAACGTCTGCGACA+CGG | + | chr1.4:69177552-69177571 | None:intergenic | 55.0% | |
| GAAGCTCTCAAGAGCTGCAG+AGG | - | chr1.4:69179350-69179369 | MS.gene07318:intron | 55.0% | |
| GACCCTCAAGAAGATCACCC+CGG | - | chr1.4:69179142-69179161 | MS.gene07318:intron | 55.0% | |
| GAGGCCGCACTTTCAGAAGT+CGG | - | chr1.4:69179452-69179471 | MS.gene07318:CDS | 55.0% | |
| GCTTCTCCGACGACTATGCA+CGG | - | chr1.4:69177448-69177467 | MS.gene07318:CDS | 55.0% | |
| GTTCCGTGTCCAACACTTGC+CGG | - | chr1.4:69177759-69177778 | MS.gene07318:CDS | 55.0% | |
| TCACCGGGGTGATCTTCTTG+AGG | + | chr1.4:69179148-69179167 | None:intergenic | 55.0% | |
| TGAACTCGAGAGATGCGTCC+AGG | - | chr1.4:69177604-69177623 | MS.gene07318:CDS | 55.0% | |
| TGTCAGACACCGGCAAGTGT+TGG | + | chr1.4:69177771-69177790 | None:intergenic | 55.0% | |
| ! | ATAGCTCCGATTGGTCACCG+GGG | + | chr1.4:69179162-69179181 | None:intergenic | 55.0% |
| ! | CGGTTCCTCCGGTCTTTTCT+AGG | + | chr1.4:69177532-69177551 | None:intergenic | 55.0% |
| ! | CTGAAAGTGCGGCCTCTAAG+TGG | + | chr1.4:69179448-69179467 | None:intergenic | 55.0% |
| ! | GATAGCTCCGATTGGTCACC+GGG | + | chr1.4:69179163-69179182 | None:intergenic | 55.0% |
| ! | GGAAGCTGTGTCGGTCTTTG+AGG | - | chr1.4:69179328-69179347 | MS.gene07318:intron | 55.0% |
| ! | GTTTGATTTCCGGCGGAGGA+AGG | - | chr1.4:69177426-69177445 | MS.gene07318:CDS | 55.0% |
| ! | TACGGCCGTTTGATTTCCGG+CGG | - | chr1.4:69177419-69177438 | MS.gene07318:CDS | 55.0% |
| ! | TGGTAAGTTTCGCGTTGGCG+CGG | + | chr1.4:69179062-69179081 | None:intergenic | 55.0% |
| !! | ACACCGGCAAGTGTTGGACA+CGG | + | chr1.4:69177765-69177784 | None:intergenic | 55.0% |
| !! | GGTCGGCTAGTCTTCGGTAA+AGG | + | chr1.4:69177511-69177530 | None:intergenic | 55.0% |
| !! | GTTGGTTGGTGTTGCAGTGC+AGG | - | chr1.4:69179280-69179299 | MS.gene07318:intron | 55.0% |
| ACGACTATGCACGGCTGCGA+CGG | - | chr1.4:69177457-69177476 | MS.gene07318:CDS | 60.0% | |
| GCCGACCTAGAAAAGACCGG+AGG | - | chr1.4:69177524-69177543 | MS.gene07318:CDS | 60.0% | |
| TCGCAGCCGTGCATAGTCGT+CGG | + | chr1.4:69177457-69177476 | None:intergenic | 60.0% | |
| CGTCTGCGACACGGTTCCTC+CGG | + | chr1.4:69177543-69177562 | None:intergenic | 65.0% | |
| TCGGAGAAGCCTTCCTCCGC+CGG | + | chr1.4:69177438-69177457 | None:intergenic | 65.0% | |
| ! | GGCCGTTTGATTTCCGGCGG+AGG | - | chr1.4:69177422-69177441 | MS.gene07318:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 69177413 | 69179700 | 69177413 | ID=MS.gene07318 |
| chr1.4 | mRNA | 69177413 | 69179700 | 69177413 | ID=MS.gene07318.t1;Parent=MS.gene07318 |
| chr1.4 | exon | 69179449 | 69179700 | 69179449 | ID=MS.gene07318.t1.exon1;Parent=MS.gene07318.t1 |
| chr1.4 | CDS | 69179449 | 69179700 | 69179449 | ID=cds.MS.gene07318.t1;Parent=MS.gene07318.t1 |
| chr1.4 | exon | 69177413 | 69178603 | 69177413 | ID=MS.gene07318.t1.exon2;Parent=MS.gene07318.t1 |
| chr1.4 | CDS | 69177413 | 69178603 | 69177413 | ID=cds.MS.gene07318.t1;Parent=MS.gene07318.t1 |
| Gene Sequence |
| Protein sequence |
