Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074391.t1 | XP_013461053.1 | 99.3 | 415 | 3 | 0 | 1 | 415 | 1 | 415 | 1.10E-219 | 772.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074391.t1 | Q86HG0 | 47.0 | 413 | 204 | 3 | 10 | 415 | 8 | 412 | 3.0e-88 | 327.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074391.t1 | A0A072UZU5 | 99.3 | 415 | 3 | 0 | 1 | 415 | 1 | 415 | 8.1e-220 | 772.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074391 | MS.gene62173 | PPI |
| MS.gene50130 | MS.gene074391 | PPI |
| MS.gene63291 | MS.gene074391 | PPI |
| MS.gene074391 | MS.gene29519 | PPI |
| MS.gene63503 | MS.gene074391 | PPI |
| MS.gene008143 | MS.gene074391 | PPI |
| MS.gene074391 | MS.gene32515 | PPI |
| MS.gene074391 | MS.gene29520 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074391.t1 | MTR_3g078570 | 99.277 | 415 | 3 | 0 | 1 | 415 | 1 | 415 | 0.0 | 848 |
| MS.gene074391.t1 | MTR_3g078570 | 98.916 | 369 | 4 | 0 | 1 | 369 | 1 | 369 | 0.0 | 758 |
| MS.gene074391.t1 | MTR_6g008840 | 81.840 | 413 | 75 | 0 | 3 | 415 | 2 | 414 | 0.0 | 719 |
| MS.gene074391.t1 | MTR_4g071670 | 72.881 | 236 | 46 | 1 | 180 | 415 | 3 | 220 | 1.25e-122 | 355 |
| MS.gene074391.t1 | MTR_5g080770 | 32.000 | 400 | 224 | 7 | 10 | 409 | 3 | 354 | 1.09e-62 | 206 |
| MS.gene074391.t1 | MTR_3g069070 | 32.250 | 400 | 223 | 7 | 10 | 409 | 3 | 354 | 1.26e-62 | 206 |
| MS.gene074391.t1 | MTR_3g069070 | 31.157 | 337 | 187 | 5 | 73 | 409 | 4 | 295 | 4.66e-49 | 169 |
| MS.gene074391.t1 | MTR_4g133690 | 30.275 | 327 | 166 | 5 | 80 | 406 | 30 | 294 | 2.56e-43 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074391.t1 | AT1G74910 | 80.288 | 416 | 80 | 2 | 1 | 415 | 1 | 415 | 0.0 | 711 |
| MS.gene074391.t1 | AT1G74910 | 80.288 | 416 | 80 | 2 | 1 | 415 | 1 | 415 | 0.0 | 711 |
| MS.gene074391.t1 | AT2G04650 | 75.787 | 413 | 91 | 2 | 4 | 415 | 2 | 406 | 0.0 | 661 |
| MS.gene074391.t1 | AT1G74910 | 80.270 | 370 | 71 | 2 | 1 | 369 | 1 | 369 | 0.0 | 640 |
| MS.gene074391.t1 | AT2G04650 | 75.315 | 397 | 89 | 2 | 20 | 415 | 6 | 394 | 0.0 | 631 |
| MS.gene074391.t1 | AT2G39770 | 30.730 | 397 | 227 | 7 | 10 | 406 | 3 | 351 | 7.11e-59 | 196 |
| MS.gene074391.t1 | AT2G39770 | 30.730 | 397 | 227 | 7 | 10 | 406 | 3 | 351 | 7.11e-59 | 196 |
| MS.gene074391.t1 | AT2G39770 | 30.730 | 397 | 227 | 7 | 10 | 406 | 3 | 351 | 7.11e-59 | 196 |
| MS.gene074391.t1 | AT4G30570 | 31.565 | 377 | 211 | 7 | 30 | 405 | 1 | 331 | 5.11e-57 | 191 |
| MS.gene074391.t1 | AT3G55590 | 31.671 | 401 | 221 | 9 | 10 | 406 | 3 | 354 | 2.13e-56 | 190 |
Find 119 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATTGAGCAAGAAAATA+TGG | 0.201072 | 3.4:-75107457 | None:intergenic |
| ATCTTGAACGCCGACATTTA+AGG | 0.216010 | 3.4:-75111302 | None:intergenic |
| CCAACCTAACAGGGAGTTTA+AGG | 0.219086 | 3.4:-75106730 | None:intergenic |
| CACAAACATACAAAAGTTTC+AGG | 0.221357 | 3.4:-75107890 | None:intergenic |
| CCAGAGTCGGCCAGTGAATT+TGG | 0.235678 | 3.4:+75107815 | MS.gene074391:CDS |
| TACCATCTCCATTTGCTAAT+AGG | 0.285546 | 3.4:-75109413 | None:intergenic |
| AGATAAATCCGAGCTAAATT+AGG | 0.306173 | 3.4:-75106650 | None:intergenic |
| GGAGATTACAACGCAAAGTT+TGG | 0.306850 | 3.4:+75110819 | MS.gene074391:CDS |
| GCTAATGGAAAGAGTGGTTT+AGG | 0.338257 | 3.4:-75106495 | None:intergenic |
| GGCATGAAATCCAACCTAAC+AGG | 0.341961 | 3.4:-75106740 | None:intergenic |
| TTAGGAATGTTGAATGATAA+TGG | 0.346235 | 3.4:-75106477 | None:intergenic |
| GATATCCTCTCACCTCTTGC+AGG | 0.350385 | 3.4:+75109193 | MS.gene074391:CDS |
| TATACACACCACAGTTTATA+AGG | 0.358814 | 3.4:-75108024 | None:intergenic |
| GTTGTTCTTCATGCAATTGT+TGG | 0.365369 | 3.4:+75110072 | MS.gene074391:CDS |
| GGCCAGTGAATTTGGCGAAT+TGG | 0.387549 | 3.4:+75107823 | MS.gene074391:CDS |
| GAGATTACAACGCAAAGTTT+GGG | 0.392448 | 3.4:+75110820 | MS.gene074391:CDS |
| TCAATGGCAGTAAAGATATC+TGG | 0.400157 | 3.4:-75108055 | None:intergenic |
| ACGACCTTAAACTCCCTGTT+AGG | 0.403314 | 3.4:+75106726 | MS.gene074391:CDS |
| AAACCACTCTTTCCATTAGC+TGG | 0.410401 | 3.4:+75106498 | MS.gene074391:CDS |
| GACAAGCCTCATGGTTCTGC+TGG | 0.416830 | 3.4:+75107301 | MS.gene074391:CDS |
| TGGACGGAATCGAGTGCCTT+TGG | 0.418152 | 3.4:-75106457 | None:intergenic |
| AAGAAATTACCCAGCATTTG+TGG | 0.418766 | 3.4:-75107503 | None:intergenic |
| ATTAAGAAAGCCTGCATCAT+TGG | 0.421127 | 3.4:+75109435 | MS.gene074391:CDS |
| CCAAATTCACTGGCCGACTC+TGG | 0.423147 | 3.4:-75107815 | None:intergenic |
| TGGGAACAAATCAAAACTCC+TGG | 0.423593 | 3.4:+75109253 | MS.gene074391:CDS |
| TGGACGATGGGCACGTGTCC+AGG | 0.425264 | 3.4:+75110110 | MS.gene074391:CDS |
| TCCAATCTGACATAATTTGC+CGG | 0.429895 | 3.4:-75109166 | None:intergenic |
| CAGGTTTCTCTGTGTAATGC+AGG | 0.432714 | 3.4:-75107871 | None:intergenic |
| ACCATGGGTTGTCCAGCTAA+TGG | 0.441231 | 3.4:-75106510 | None:intergenic |
| TTAGCTCGGATTTATCTCAT+TGG | 0.448196 | 3.4:+75106656 | MS.gene074391:CDS |
| CCTTGATTTCAACATCATCA+AGG | 0.452782 | 3.4:-75109964 | None:intergenic |
| GAGTTTAAGGTCGTTGGAGA+TGG | 0.461406 | 3.4:-75106717 | None:intergenic |
| TGGTGGCATGGGAACAATAC+TGG | 0.463216 | 3.4:+75107689 | MS.gene074391:CDS |
| CCTTGATGATGTTGAAATCA+AGG | 0.464913 | 3.4:+75109964 | MS.gene074391:CDS |
| CTCAGATTCCTAATTTAGCT+CGG | 0.466843 | 3.4:+75106642 | MS.gene074391:intron |
| GAGAGTTGTGGCGGTTATCA+TGG | 0.469516 | 3.4:+75106422 | MS.gene074391:CDS |
| ATGGTATATTAGATACTTGA+AGG | 0.470369 | 3.4:+75107276 | MS.gene074391:intron |
| CAGAATGTCCATAAAATGTT+CGG | 0.473623 | 3.4:+75109353 | MS.gene074391:intron |
| AACAGGGAGTTTAAGGTCGT+TGG | 0.480946 | 3.4:-75106723 | None:intergenic |
| CTGCTGCATTGCTTCAAAGC+TGG | 0.482375 | 3.4:-75108302 | None:intergenic |
| ATATCTGCAAATGCTCGTAT+AGG | 0.483166 | 3.4:+75109911 | MS.gene074391:CDS |
| AGATATCTTTACTGCCATTG+AGG | 0.489647 | 3.4:+75108057 | MS.gene074391:CDS |
| ACAATTGAGCAAGAAAATAT+GGG | 0.492037 | 3.4:-75107456 | None:intergenic |
| TGTCATCATGGAGGAGGATC+CGG | 0.492171 | 3.4:+75107345 | MS.gene074391:CDS |
| TACCAATTCGCCAAATTCAC+TGG | 0.493644 | 3.4:-75107825 | None:intergenic |
| GATATCTTTACTGCCATTGA+GGG | 0.493889 | 3.4:+75108058 | MS.gene074391:CDS |
| CGGAATCGAGTGCCTTTGGT+GGG | 0.495390 | 3.4:-75106453 | None:intergenic |
| TCCCCTCACCTATTAGCAAA+TGG | 0.503778 | 3.4:+75109405 | MS.gene074391:CDS |
| CTGAGAAGAAACACCCTCAA+TGG | 0.504733 | 3.4:-75108071 | None:intergenic |
| GTTGTGGCGGTTATCATGGT+TGG | 0.505551 | 3.4:+75106426 | MS.gene074391:CDS |
| GACGGATGCACCTTTGCTGA+TGG | 0.506224 | 3.4:-75109474 | None:intergenic |
| AAGCCTCATGGTTCTGCTGG+TGG | 0.514794 | 3.4:+75107304 | MS.gene074391:CDS |
| ACCGGCAAATTATGTCAGAT+TGG | 0.514981 | 3.4:+75109165 | MS.gene074391:CDS |
| TCCATTAGCTGGACAACCCA+TGG | 0.516294 | 3.4:+75106509 | MS.gene074391:CDS |
| CATTTAAGGTCTTGTGTGGA+AGG | 0.516494 | 3.4:-75111288 | None:intergenic |
| ATCTGTTGCCGTTGAGGATG+AGG | 0.520316 | 3.4:+75111243 | MS.gene074391:CDS |
| ATAAACATCACCAATGATGC+AGG | 0.520904 | 3.4:-75109445 | None:intergenic |
| ACGGAATCGAGTGCCTTTGG+TGG | 0.521109 | 3.4:-75106454 | None:intergenic |
| TTCTTCATGCAATTGTTGGA+TGG | 0.524578 | 3.4:+75110076 | MS.gene074391:CDS |
| AACTGTTTCTTCCCTGCAAG+AGG | 0.524841 | 3.4:-75109205 | None:intergenic |
| GAAATCCTCCATTGGACGAT+GGG | 0.528328 | 3.4:+75110098 | MS.gene074391:CDS |
| TAACTTCAAAGATGTCATCA+TGG | 0.529752 | 3.4:+75107333 | MS.gene074391:CDS |
| TTACCCAGCATTTGTGGCAG+AGG | 0.533855 | 3.4:-75107497 | None:intergenic |
| CAGCTTTGAAGCAATGCAGC+AGG | 0.535500 | 3.4:+75108303 | MS.gene074391:CDS |
| TTTCCTCTGCCACAAATGCT+GGG | 0.535993 | 3.4:+75107494 | MS.gene074391:CDS |
| TTTGAAGGTCTCTCCAGAGT+CGG | 0.540442 | 3.4:+75107802 | MS.gene074391:intron |
| GTGGCGGTTATCATGGTTGG+AGG | 0.543279 | 3.4:+75106429 | MS.gene074391:CDS |
| TATAAACTAATTCAGGGTCG+TGG | 0.543960 | 3.4:+75110798 | MS.gene074391:intron |
| CTCCATTTGCTAATAGGTGA+GGG | 0.546056 | 3.4:-75109407 | None:intergenic |
| GCAAATGCTCGTATAGGAGC+TGG | 0.550558 | 3.4:+75109917 | MS.gene074391:CDS |
| CTCGTATAGGAGCTGGTGCA+AGG | 0.551410 | 3.4:+75109924 | MS.gene074391:CDS |
| TGTGTAATGCAGGAGTTCAT+TGG | 0.552304 | 3.4:-75107861 | None:intergenic |
| TGCCGTTGAGGATGAGGTAG+TGG | 0.555931 | 3.4:+75111249 | MS.gene074391:CDS |
| TGCAGGAGTTCATTGGTGAC+TGG | 0.556407 | 3.4:-75107854 | None:intergenic |
| GTTGGATGGAAATCCTCCAT+TGG | 0.560456 | 3.4:+75110090 | MS.gene074391:CDS |
| GACACGTGCCCATCGTCCAA+TGG | 0.566978 | 3.4:-75110106 | None:intergenic |
| GTGGTTGAACAGATTGGTCC+TGG | 0.568136 | 3.4:+75109881 | MS.gene074391:intron |
| AAGTTTGGGGTCACTATACT+CGG | 0.569045 | 3.4:+75110834 | MS.gene074391:CDS |
| CAAAGATGTCATCATGGAGG+AGG | 0.569219 | 3.4:+75107339 | MS.gene074391:CDS |
| TTTGCAGATATTGACACGCC+AGG | 0.572563 | 3.4:-75109899 | None:intergenic |
| GGGAACAAATCAAAACTCCT+GGG | 0.579375 | 3.4:+75109254 | MS.gene074391:CDS |
| GTTCTTCTGTAGGAGTCTAC+CGG | 0.579815 | 3.4:+75109147 | MS.gene074391:intron |
| AAGCAATGCAGCAGGACACA+AGG | 0.584010 | 3.4:+75108311 | MS.gene074391:CDS |
| ACGGATGCACCTTTGCTGAT+GGG | 0.584982 | 3.4:-75109473 | None:intergenic |
| ATGGTTGGAGGCCCCACCAA+AGG | 0.585366 | 3.4:+75106441 | MS.gene074391:CDS |
| GAATGTTGAATGATAATGGA+CGG | 0.587591 | 3.4:-75106473 | None:intergenic |
| GGGAACAATACTGGTTGTCA+AGG | 0.588610 | 3.4:+75107698 | MS.gene074391:CDS |
| AGGTGAATCTGTTGCCGTTG+AGG | 0.589560 | 3.4:+75111237 | MS.gene074391:intron |
| CACCTATTAGCAAATGGAGA+TGG | 0.589767 | 3.4:+75109411 | MS.gene074391:CDS |
| TCTCCATTTGCTAATAGGTG+AGG | 0.592639 | 3.4:-75109408 | None:intergenic |
| GGAAATCCTCCATTGGACGA+TGG | 0.596829 | 3.4:+75110097 | MS.gene074391:CDS |
| CCGACATTTAAGGTCTTGTG+TGG | 0.598385 | 3.4:-75111292 | None:intergenic |
| TGAATATTAACCTTTGCAGA+CGG | 0.603189 | 3.4:-75109492 | None:intergenic |
| GCGAAATTGTGAAAGATACA+AGG | 0.603731 | 3.4:-75109376 | None:intergenic |
| GGAATCGAGTGCCTTTGGTG+GGG | 0.604355 | 3.4:-75106452 | None:intergenic |
| GCATGAAATCCAACCTAACA+GGG | 0.605620 | 3.4:-75106739 | None:intergenic |
| AAAGGTGCATCCGTCTGCAA+AGG | 0.606718 | 3.4:+75109482 | MS.gene074391:CDS |
| TGTCCAGCTAATGGAAAGAG+TGG | 0.609015 | 3.4:-75106501 | None:intergenic |
| ATATCCTCTCACCTCTTGCA+GGG | 0.611025 | 3.4:+75109194 | MS.gene074391:CDS |
| TTATATTCACCCATCAGCAA+AGG | 0.612901 | 3.4:+75109464 | MS.gene074391:CDS |
| TTGAAGGAGGACAAGCCTCA+TGG | 0.616152 | 3.4:+75107292 | MS.gene074391:CDS |
| TCTTCCCTGCAAGAGGTGAG+AGG | 0.617718 | 3.4:-75109198 | None:intergenic |
| AACCACTACCTCATCCTCAA+CGG | 0.619133 | 3.4:-75111251 | None:intergenic |
| GTTGTATATATATGAAACCA+TGG | 0.622029 | 3.4:+75109225 | MS.gene074391:CDS |
| AGAGATTGGATGATGAACCA+TGG | 0.625691 | 3.4:-75106526 | None:intergenic |
| GAGATTGGATGATGAACCAT+GGG | 0.630585 | 3.4:-75106525 | None:intergenic |
| AGATTACAACGCAAAGTTTG+GGG | 0.633486 | 3.4:+75110821 | MS.gene074391:CDS |
| TTGAGGGTGTTTCTTCTCAG+CGG | 0.638549 | 3.4:+75108074 | MS.gene074391:CDS |
| CCACACAAGACCTTAAATGT+CGG | 0.639985 | 3.4:+75111292 | MS.gene074391:CDS |
| TGCAGAAGAGAGAGTTGTGG+CGG | 0.647212 | 3.4:+75106413 | MS.gene074391:CDS |
| TCTTCTCAGCGGAAAGACAG+AGG | 0.647631 | 3.4:+75108085 | MS.gene074391:CDS |
| ACGTGCCCATCGTCCAATGG+AGG | 0.649101 | 3.4:-75110103 | None:intergenic |
| TCCATTTGCTAATAGGTGAG+GGG | 0.656945 | 3.4:-75109406 | None:intergenic |
| CTAATAGGTGAGGGGATGTG+TGG | 0.681648 | 3.4:-75109398 | None:intergenic |
| GTTAGTGACCTTATAAACTG+TGG | 0.686135 | 3.4:+75108016 | MS.gene074391:CDS |
| GTATATTAGATACTTGAAGG+AGG | 0.708091 | 3.4:+75107279 | MS.gene074391:intron |
| AAATGCAGAAGAGAGAGTTG+TGG | 0.708355 | 3.4:+75106410 | MS.gene074391:CDS |
| CTTCAAAGATGTCATCATGG+AGG | 0.716377 | 3.4:+75107336 | MS.gene074391:CDS |
| AGACCACCAGCAGAACCATG+AGG | 0.741974 | 3.4:-75107307 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAGATATAAAATAATTA+TGG | - | chr3.4:75111011-75111030 | None:intergenic | 10.0% |
| !! | CAAAGATATAAAATAATTAT+GGG | - | chr3.4:75111010-75111029 | None:intergenic | 10.0% |
| !! | TAAAATATGAAGAAATTAAA+AGG | - | chr3.4:75107383-75107402 | None:intergenic | 10.0% |
| !!! | ATTAACTAAGAATAATTTTT+GGG | + | chr3.4:75108245-75108264 | MS.gene074391:intron | 10.0% |
| !!! | TATTAACTAAGAATAATTTT+TGG | + | chr3.4:75108244-75108263 | MS.gene074391:intron | 10.0% |
| !! | TAAAAGGATAATATAATAAC+CGG | - | chr3.4:75107367-75107386 | None:intergenic | 15.0% |
| !! | TGTTATGAGTAAAAAATATT+AGG | - | chr3.4:75109597-75109616 | None:intergenic | 15.0% |
| !!! | ATTCAGTATTGAAATAATTA+AGG | - | chr3.4:75110985-75111004 | None:intergenic | 15.0% |
| !!! | TATTTGGAATAAAATCTTTA+GGG | + | chr3.4:75108822-75108841 | MS.gene074391:intron | 15.0% |
| !!! | TTTAAGATTGCTTATATTTA+AGG | - | chr3.4:75110917-75110936 | None:intergenic | 15.0% |
| !! | AATAAAAGGAATGTAAAGAT+AGG | - | chr3.4:75110757-75110776 | None:intergenic | 20.0% |
| !! | AATAAGAGCAGAAAAAAATT+AGG | - | chr3.4:75107221-75107240 | None:intergenic | 20.0% |
| !! | AGAATTAAAAACGTTTATAG+TGG | - | chr3.4:75111078-75111097 | None:intergenic | 20.0% |
| !! | ATATTAAAAACTCAAGTAAC+AGG | - | chr3.4:75110199-75110218 | None:intergenic | 20.0% |
| !! | ATTCTTAGTTAATATACACA+AGG | - | chr3.4:75108238-75108257 | None:intergenic | 20.0% |
| !! | CAAAATAAATCATTTAAGCA+TGG | + | chr3.4:75108680-75108699 | MS.gene074391:intron | 20.0% |
| !! | GAAATGTATAAACTAATTCA+GGG | + | chr3.4:75110792-75110811 | MS.gene074391:intron | 20.0% |
| !! | TGAAATGTATAAACTAATTC+AGG | + | chr3.4:75110791-75110810 | MS.gene074391:intron | 20.0% |
| !!! | AGAGAATTATCATATTTTGA+AGG | - | chr3.4:75110617-75110636 | None:intergenic | 20.0% |
| !!! | ATACTTTTTAGAGTATAACT+TGG | + | chr3.4:75110330-75110349 | MS.gene074391:intron | 20.0% |
| !!! | ATCAAAATGGGAAAATATTT+TGG | - | chr3.4:75110651-75110670 | None:intergenic | 20.0% |
| !!! | GTATTTGGAATAAAATCTTT+AGG | + | chr3.4:75108821-75108840 | MS.gene074391:intron | 20.0% |
| !!! | TAAAAAGTATATGTTCATTC+AGG | - | chr3.4:75110320-75110339 | None:intergenic | 20.0% |
| !!! | TATGTTTAGAACATTTAACT+TGG | - | chr3.4:75108986-75109005 | None:intergenic | 20.0% |
| !!! | TGAAATGCATAAAACATTTT+TGG | + | chr3.4:75110010-75110029 | MS.gene074391:intron | 20.0% |
| !!! | TTTTAAATATCTCATCTTAC+AGG | + | chr3.4:75110041-75110060 | MS.gene074391:intron | 20.0% |
| ! | AAAAGATCACAAAAATTGGA+TGG | - | chr3.4:75107773-75107792 | None:intergenic | 25.0% |
| ! | AAAATAAGTGTATGCATACA+TGG | - | chr3.4:75108553-75108572 | None:intergenic | 25.0% |
| ! | AACATAGAAATGATTCATAG+AGG | + | chr3.4:75109000-75109019 | MS.gene074391:intron | 25.0% |
| ! | ACAATTGAGCAAGAAAATAT+GGG | - | chr3.4:75107459-75107478 | None:intergenic | 25.0% |
| ! | AGATTGCTTATATTTAAGGA+AGG | - | chr3.4:75110913-75110932 | None:intergenic | 25.0% |
| ! | AGTAAAATTTCAGAAAGTTC+TGG | - | chr3.4:75108386-75108405 | None:intergenic | 25.0% |
| ! | ATGGTATATTAGATACTTGA+AGG | + | chr3.4:75107276-75107295 | MS.gene074391:intron | 25.0% |
| ! | CTCACTCAAAAAGATAAAAT+AGG | - | chr3.4:75109800-75109819 | None:intergenic | 25.0% |
| ! | GAAAACAAGGATAGTTTATA+TGG | + | chr3.4:75109100-75109119 | MS.gene074391:intron | 25.0% |
| ! | GAGAAAAAGATCACAAAAAT+TGG | - | chr3.4:75107777-75107796 | None:intergenic | 25.0% |
| ! | GCAAACAAATTACGAATAAA+AGG | - | chr3.4:75110771-75110790 | None:intergenic | 25.0% |
| ! | GTTGTATATATATGAAACCA+TGG | + | chr3.4:75109225-75109244 | MS.gene074391:CDS | 25.0% |
| ! | TATACGATTGTCAACAATAT+TGG | + | chr3.4:75108626-75108645 | MS.gene074391:intron | 25.0% |
| ! | TCAAATAAGTCAATTCATTC+AGG | - | chr3.4:75106764-75106783 | None:intergenic | 25.0% |
| ! | TGAGACTAAATATTTAGAGA+CGG | + | chr3.4:75111137-75111156 | MS.gene074391:intron | 25.0% |
| ! | TTAAAATTTCTAAACTTGCC+TGG | - | chr3.4:75110131-75110150 | None:intergenic | 25.0% |
| ! | TTAATTGATGCATATCATGT+AGG | + | chr3.4:75109743-75109762 | MS.gene074391:intron | 25.0% |
| ! | TTAGGAATGTTGAATGATAA+TGG | - | chr3.4:75106480-75106499 | None:intergenic | 25.0% |
| !! | AAATTAGTCGTCTTTTCTAT+AGG | + | chr3.4:75110938-75110957 | MS.gene074391:intron | 25.0% |
| !! | ATATGAAACCATGGATTTTT+GGG | + | chr3.4:75109234-75109253 | MS.gene074391:CDS | 25.0% |
| !! | ATATGTTGTTTATCCAAACT+TGG | + | chr3.4:75107195-75107214 | MS.gene074391:intron | 25.0% |
| !! | TAATTTGTGCTGGATATATA+AGG | + | chr3.4:75108189-75108208 | MS.gene074391:intron | 25.0% |
| !! | TATATGAAACCATGGATTTT+TGG | + | chr3.4:75109233-75109252 | MS.gene074391:CDS | 25.0% |
| !!! | ATTTTATCTTTTTGAGTGAG+AGG | + | chr3.4:75109800-75109819 | MS.gene074391:intron | 25.0% |
| !!! | CATTTAGGTTTTCTTTTTCT+TGG | - | chr3.4:75109827-75109846 | None:intergenic | 25.0% |
| !!! | GGAGTTCTTCATATTTTTAA+TGG | + | chr3.4:75107429-75107448 | MS.gene074391:intron | 25.0% |
| !!! | GGCTTTTAACTAATCATTTT+GGG | - | chr3.4:75108726-75108745 | None:intergenic | 25.0% |
| !!! | TCAGCTAAATTTTGAAAAAC+AGG | - | chr3.4:75108363-75108382 | None:intergenic | 25.0% |
| !!! | TGGCTTTTAACTAATCATTT+TGG | - | chr3.4:75108727-75108746 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGGTTTCCAAT+AGG | - | chr3.4:75110486-75110505 | None:intergenic | 25.0% |
| AAAGATAATACATCAGTGAG+AGG | + | chr3.4:75108950-75108969 | MS.gene074391:intron | 30.0% | |
| AAATTCAACATGCCTCAAAT+AGG | + | chr3.4:75110440-75110459 | MS.gene074391:intron | 30.0% | |
| AACTTTACTATTAGCATCAC+CGG | + | chr3.4:75110558-75110577 | MS.gene074391:intron | 30.0% | |
| AATACGATAATCACACATGA+AGG | - | chr3.4:75109317-75109336 | None:intergenic | 30.0% | |
| AATGTTACTAGTTGTACTTC+AGG | + | chr3.4:75109621-75109640 | MS.gene074391:intron | 30.0% | |
| ACACAAGAATCGATAGTATT+TGG | + | chr3.4:75108806-75108825 | MS.gene074391:intron | 30.0% | |
| ACATAAGCGTTTATCATGAT+AGG | + | chr3.4:75106948-75106967 | MS.gene074391:intron | 30.0% | |
| AGATAAATCCGAGCTAAATT+AGG | - | chr3.4:75106653-75106672 | None:intergenic | 30.0% | |
| AGATGATGAGAATTCTATGA+TGG | + | chr3.4:75108773-75108792 | MS.gene074391:intron | 30.0% | |
| AGCCAATAAGAAAATAAGAC+CGG | + | chr3.4:75108742-75108761 | MS.gene074391:intron | 30.0% | |
| ATAAGACATAGCATTATGCA+TGG | + | chr3.4:75110359-75110378 | MS.gene074391:intron | 30.0% | |
| ATAAGTTCTATGAGACTGTT+TGG | + | chr3.4:75107041-75107060 | MS.gene074391:intron | 30.0% | |
| ATTTAAACTCCCTGTTAAGT+TGG | + | chr3.4:75106981-75107000 | MS.gene074391:intron | 30.0% | |
| CACAAACATACAAAAGTTTC+AGG | - | chr3.4:75107893-75107912 | None:intergenic | 30.0% | |
| CACAATTGAGCAAGAAAATA+TGG | - | chr3.4:75107460-75107479 | None:intergenic | 30.0% | |
| CAGAATGTCCATAAAATGTT+CGG | + | chr3.4:75109353-75109372 | MS.gene074391:intron | 30.0% | |
| CATAACATGTCAAGACATTT+AGG | - | chr3.4:75109842-75109861 | None:intergenic | 30.0% | |
| CATAATGCTATGTCTTATAG+TGG | - | chr3.4:75110357-75110376 | None:intergenic | 30.0% | |
| CATAGTGAACAAGATAAATG+AGG | - | chr3.4:75107259-75107278 | None:intergenic | 30.0% | |
| CTCATTTATCTTGTTCACTA+TGG | + | chr3.4:75107257-75107276 | MS.gene074391:intron | 30.0% | |
| GAAAAAAATTAGGCCAAGTT+TGG | - | chr3.4:75107211-75107230 | None:intergenic | 30.0% | |
| GATTATACATACGCGTTTAT+TGG | + | chr3.4:75107151-75107170 | MS.gene074391:intron | 30.0% | |
| GTATATTAGATACTTGAAGG+AGG | + | chr3.4:75107279-75107298 | MS.gene074391:intron | 30.0% | |
| TAAATTGTTCCACTAGCTAA+AGG | + | chr3.4:75110159-75110178 | MS.gene074391:intron | 30.0% | |
| TAACTTCAAAGATGTCATCA+TGG | + | chr3.4:75107333-75107352 | MS.gene074391:CDS | 30.0% | |
| TAAGTTCTATGAGACTGTTT+GGG | + | chr3.4:75107042-75107061 | MS.gene074391:intron | 30.0% | |
| TAATCATCAAAATGCCACAA+TGG | - | chr3.4:75107750-75107769 | None:intergenic | 30.0% | |
| TATAAGGAACTGTAGATAAC+TGG | + | chr3.4:75108205-75108224 | MS.gene074391:intron | 30.0% | |
| TATACACACCACAGTTTATA+AGG | - | chr3.4:75108027-75108046 | None:intergenic | 30.0% | |
| TGAATATTAACCTTTGCAGA+CGG | - | chr3.4:75109495-75109514 | None:intergenic | 30.0% | |
| TTATATTTAAGGAAGGAGGT+AGG | - | chr3.4:75110906-75110925 | None:intergenic | 30.0% | |
| TTGCTTATATTTAAGGAAGG+AGG | - | chr3.4:75110910-75110929 | None:intergenic | 30.0% | |
| ! | ATGGAAATGAGGTATCAAAA+TGG | - | chr3.4:75110664-75110683 | None:intergenic | 30.0% |
| ! | ATGTTCAATCTAATTTGTGC+TGG | + | chr3.4:75108179-75108198 | MS.gene074391:intron | 30.0% |
| ! | CAACTTGACTTTTGTTAATG+TGG | + | chr3.4:75109862-75109881 | MS.gene074391:intron | 30.0% |
| ! | TCTTTTTCTCCTCTTTTTGA+AGG | + | chr3.4:75107787-75107806 | MS.gene074391:intron | 30.0% |
| ! | TGGAAATGAGGTATCAAAAT+GGG | - | chr3.4:75110663-75110682 | None:intergenic | 30.0% |
| ! | TTTCTTTTCTCAGATACACT+CGG | + | chr3.4:75107520-75107539 | MS.gene074391:intron | 30.0% |
| ! | TTTTTACGAACGCTATAGTA+GGG | - | chr3.4:75110708-75110727 | None:intergenic | 30.0% |
| !! | ATTTGAGGCATGTTGAATTT+TGG | - | chr3.4:75110440-75110459 | None:intergenic | 30.0% |
| !! | GAATGTTGAATGATAATGGA+CGG | - | chr3.4:75106476-75106495 | None:intergenic | 30.0% |
| !! | GCTGATTTTGCTTTCTTTTT+CGG | + | chr3.4:75110521-75110540 | MS.gene074391:intron | 30.0% |
| !!! | TTTTTTACGAACGCTATAGT+AGG | - | chr3.4:75110709-75110728 | None:intergenic | 30.0% |
| AAACGCAAACTTCGTATTTC+TGG | - | chr3.4:75108129-75108148 | None:intergenic | 35.0% | |
| AAAGATAAAATAGGTCCTCG+CGG | - | chr3.4:75109791-75109810 | None:intergenic | 35.0% | |
| AAGAAATTACCCAGCATTTG+TGG | - | chr3.4:75107506-75107525 | None:intergenic | 35.0% | |
| ACAGATGCTCACAAAAAACA+TGG | + | chr3.4:75107669-75107688 | MS.gene074391:intron | 35.0% | |
| AGACAGAGGTAACTCAAATA+TGG | + | chr3.4:75108099-75108118 | MS.gene074391:intron | 35.0% | |
| AGATATCTTTACTGCCATTG+AGG | + | chr3.4:75108057-75108076 | MS.gene074391:CDS | 35.0% | |
| AGATTACAACGCAAAGTTTG+GGG | + | chr3.4:75110821-75110840 | MS.gene074391:CDS | 35.0% | |
| AGGCAAGTCTACACATTAAT+TGG | + | chr3.4:75109984-75110003 | MS.gene074391:intron | 35.0% | |
| ATAAACATCACCAATGATGC+AGG | - | chr3.4:75109448-75109467 | None:intergenic | 35.0% | |
| ATATCTGCAAATGCTCGTAT+AGG | + | chr3.4:75109911-75109930 | MS.gene074391:CDS | 35.0% | |
| ATTAAGAAAGCCTGCATCAT+TGG | + | chr3.4:75109435-75109454 | MS.gene074391:CDS | 35.0% | |
| CACTATACAGTGTGAAAACA+AGG | + | chr3.4:75109087-75109106 | MS.gene074391:intron | 35.0% | |
| CATTTCCATACCAATGTTGA+GGG | + | chr3.4:75110675-75110694 | MS.gene074391:intron | 35.0% | |
| CCTTGATTTCAACATCATCA+AGG | - | chr3.4:75109967-75109986 | None:intergenic | 35.0% | |
| CTCAGATTCCTAATTTAGCT+CGG | + | chr3.4:75106642-75106661 | MS.gene074391:intron | 35.0% | |
| GAAAATATTCAAGCTTACCC+AGG | - | chr3.4:75109274-75109293 | None:intergenic | 35.0% | |
| GAACAAGATAAATGAGGAAG+AGG | - | chr3.4:75107253-75107272 | None:intergenic | 35.0% | |
| GACTAAATATTTAGAGACGG+AGG | + | chr3.4:75111140-75111159 | MS.gene074391:intron | 35.0% | |
| GAGATTACAACGCAAAGTTT+GGG | + | chr3.4:75110820-75110839 | MS.gene074391:CDS | 35.0% | |
| GATAGAATCTTGCCTTAAGT+GGG | + | chr3.4:75108879-75108898 | MS.gene074391:intron | 35.0% | |
| GATATCTTTACTGCCATTGA+GGG | + | chr3.4:75108058-75108077 | MS.gene074391:CDS | 35.0% | |
| GCGAAATTGTGAAAGATACA+AGG | - | chr3.4:75109379-75109398 | None:intergenic | 35.0% | |
| GGTTGTCAAGGTTAGAAATT+GGG | + | chr3.4:75107710-75107729 | MS.gene074391:intron | 35.0% | |
| GTTAATGTGGTTGAACAGAT+TGG | + | chr3.4:75109875-75109894 | MS.gene074391:intron | 35.0% | |
| GTTAGTGACCTTATAAACTG+TGG | + | chr3.4:75108016-75108035 | MS.gene074391:CDS | 35.0% | |
| GTTGTTCTTCATGCAATTGT+TGG | + | chr3.4:75110072-75110091 | MS.gene074391:CDS | 35.0% | |
| TACTAGTACCAGTATGTTGA+CGG | + | chr3.4:75107408-75107427 | MS.gene074391:intron | 35.0% | |
| TATAAACTAATTCAGGGTCG+TGG | + | chr3.4:75110798-75110817 | MS.gene074391:intron | 35.0% | |
| TCAAATACGTTGATCCAAAC+CGG | - | chr3.4:75107015-75107034 | None:intergenic | 35.0% | |
| TCAACATTGGTATGGAAATG+AGG | - | chr3.4:75110675-75110694 | None:intergenic | 35.0% | |
| TCAATGGCAGTAAAGATATC+TGG | - | chr3.4:75108058-75108077 | None:intergenic | 35.0% | |
| TCATTTCCATACCAATGTTG+AGG | + | chr3.4:75110674-75110693 | MS.gene074391:intron | 35.0% | |
| TGAGTCTTAAAATTACCTGC+CGG | - | chr3.4:75110580-75110599 | None:intergenic | 35.0% | |
| TGATAGAATCTTGCCTTAAG+TGG | + | chr3.4:75108878-75108897 | MS.gene074391:intron | 35.0% | |
| TGATCGAGATCTGATTAAGA+AGG | - | chr3.4:75108507-75108526 | None:intergenic | 35.0% | |
| TGGTTGTCAAGGTTAGAAAT+TGG | + | chr3.4:75107709-75107728 | MS.gene074391:intron | 35.0% | |
| TTAGCTCGGATTTATCTCAT+TGG | + | chr3.4:75106656-75106675 | MS.gene074391:CDS | 35.0% | |
| TTATATTCACCCATCAGCAA+AGG | + | chr3.4:75109464-75109483 | MS.gene074391:CDS | 35.0% | |
| TTCCTCAACAGTGCTTATAT+GGG | - | chr3.4:75108920-75108939 | None:intergenic | 35.0% | |
| TTCTCATAACACAGATCAAG+TGG | - | chr3.4:75109707-75109726 | None:intergenic | 35.0% | |
| TTCTTCATGCAATTGTTGGA+TGG | + | chr3.4:75110076-75110095 | MS.gene074391:CDS | 35.0% | |
| ! | ATACAAGGCCGAACATTTTA+TGG | - | chr3.4:75109364-75109383 | None:intergenic | 35.0% |
| ! | ATTCTGAAGAGTTCTTCTGT+AGG | + | chr3.4:75109137-75109156 | MS.gene074391:intron | 35.0% |
| ! | GATTTGTTCCCAAAAATCCA+TGG | - | chr3.4:75109245-75109264 | None:intergenic | 35.0% |
| ! | TACCATCTCCATTTGCTAAT+AGG | - | chr3.4:75109416-75109435 | None:intergenic | 35.0% |
| ! | TCCAATCTGACATAATTTGC+CGG | - | chr3.4:75109169-75109188 | None:intergenic | 35.0% |
| ! | TTATGACCTTGTTTCATAGC+AGG | + | chr3.4:75109026-75109045 | MS.gene074391:intron | 35.0% |
| !! | CACACATTGTTTTTCCATTG+TGG | + | chr3.4:75107733-75107752 | MS.gene074391:intron | 35.0% |
| !! | CCTTGATGATGTTGAAATCA+AGG | + | chr3.4:75109964-75109983 | MS.gene074391:CDS | 35.0% |
| !!! | CACCGGTCTTATTTTCTTAT+TGG | - | chr3.4:75108747-75108766 | None:intergenic | 35.0% |
| AAACCACTCTTTCCATTAGC+TGG | + | chr3.4:75106498-75106517 | MS.gene074391:CDS | 40.0% | |
| AAATGCAGAAGAGAGAGTTG+TGG | + | chr3.4:75106410-75106429 | MS.gene074391:CDS | 40.0% | |
| AAGATAAAATAGGTCCTCGC+GGG | - | chr3.4:75109790-75109809 | None:intergenic | 40.0% | |
| ACCGGCAAATTATGTCAGAT+TGG | + | chr3.4:75109165-75109184 | MS.gene074391:CDS | 40.0% | |
| AGAGATTGGATGATGAACCA+TGG | - | chr3.4:75106529-75106548 | None:intergenic | 40.0% | |
| ATAAGACGGTAAACAGCAGT+AGG | - | chr3.4:75107973-75107992 | None:intergenic | 40.0% | |
| ATCTTGAACGCCGACATTTA+AGG | - | chr3.4:75111305-75111324 | None:intergenic | 40.0% | |
| CAATGTCCTGCTATGAAACA+AGG | - | chr3.4:75109035-75109054 | None:intergenic | 40.0% | |
| CACAAAAAACATGGTGGCAT+GGG | + | chr3.4:75107678-75107697 | MS.gene074391:CDS | 40.0% | |
| CACCTATTAGCAAATGGAGA+TGG | + | chr3.4:75109411-75109430 | MS.gene074391:CDS | 40.0% | |
| CATACTGTTATCACGGTGAA+AGG | + | chr3.4:75111164-75111183 | MS.gene074391:intron | 40.0% | |
| CCACACAAGACCTTAAATGT+CGG | + | chr3.4:75111292-75111311 | MS.gene074391:CDS | 40.0% | |
| CTTCAAAGATGTCATCATGG+AGG | + | chr3.4:75107336-75107355 | MS.gene074391:CDS | 40.0% | |
| CTTCCTCAACAGTGCTTATA+TGG | - | chr3.4:75108921-75108940 | None:intergenic | 40.0% | |
| GAGATTGGATGATGAACCAT+GGG | - | chr3.4:75106528-75106547 | None:intergenic | 40.0% | |
| GATGCTCACAAAAAACATGG+TGG | + | chr3.4:75107672-75107691 | MS.gene074391:intron | 40.0% | |
| GCATGAAATCCAACCTAACA+GGG | - | chr3.4:75106742-75106761 | None:intergenic | 40.0% | |
| GCCACTAATCCAACTTAACA+GGG | - | chr3.4:75106993-75107012 | None:intergenic | 40.0% | |
| GCTAATGGAAAGAGTGGTTT+AGG | - | chr3.4:75106498-75106517 | None:intergenic | 40.0% | |
| GGAGATTACAACGCAAAGTT+TGG | + | chr3.4:75110819-75110838 | MS.gene074391:CDS | 40.0% | |
| GGGAACAAATCAAAACTCCT+GGG | + | chr3.4:75109254-75109273 | MS.gene074391:CDS | 40.0% | |
| TAAGACGGTAAACAGCAGTA+GGG | - | chr3.4:75107972-75107991 | None:intergenic | 40.0% | |
| TACCAATTCGCCAAATTCAC+TGG | - | chr3.4:75107828-75107847 | None:intergenic | 40.0% | |
| TCACAAAAAACATGGTGGCA+TGG | + | chr3.4:75107677-75107696 | MS.gene074391:CDS | 40.0% | |
| TCTCATCATCTCAACAACAC+CGG | - | chr3.4:75108764-75108783 | None:intergenic | 40.0% | |
| TGCTTCTCATACAGGAGAAA+TGG | - | chr3.4:75110281-75110300 | None:intergenic | 40.0% | |
| TGGGAACAAATCAAAACTCC+TGG | + | chr3.4:75109253-75109272 | MS.gene074391:CDS | 40.0% | |
| TGTGTAATGCAGGAGTTCAT+TGG | - | chr3.4:75107864-75107883 | None:intergenic | 40.0% | |
| ! | AACCCATATAAGCACTGTTG+AGG | + | chr3.4:75108915-75108934 | MS.gene074391:intron | 40.0% |
| ! | AAGTTTGGGGTCACTATACT+CGG | + | chr3.4:75110834-75110853 | MS.gene074391:CDS | 40.0% |
| ! | ACTTTTCGACAAGCAGAGAT+TGG | - | chr3.4:75106543-75106562 | None:intergenic | 40.0% |
| ! | CATATAAGCACTGTTGAGGA+AGG | + | chr3.4:75108919-75108938 | MS.gene074391:intron | 40.0% |
| ! | CATTTAAGGTCTTGTGTGGA+AGG | - | chr3.4:75111291-75111310 | None:intergenic | 40.0% |
| ! | CTCCATTTGCTAATAGGTGA+GGG | - | chr3.4:75109410-75109429 | None:intergenic | 40.0% |
| ! | TCCATTTGCTAATAGGTGAG+GGG | - | chr3.4:75109409-75109428 | None:intergenic | 40.0% |
| ! | TCTCCATTTGCTAATAGGTG+AGG | - | chr3.4:75109411-75109430 | None:intergenic | 40.0% |
| !! | TCCCTGTTAAGTTGGATTAG+TGG | + | chr3.4:75106989-75107008 | MS.gene074391:intron | 40.0% |
| !! | TGTTAAGTTGGATTAGTGGC+CGG | + | chr3.4:75106993-75107012 | MS.gene074391:intron | 40.0% |
| AACCACTACCTCATCCTCAA+CGG | - | chr3.4:75111254-75111273 | None:intergenic | 45.0% | |
| AAGATGACCGTGAAAGCCTT+GGG | - | chr3.4:75109548-75109567 | None:intergenic | 45.0% | |
| AAGGTCACTAACCTGCAATC+AGG | - | chr3.4:75108008-75108027 | None:intergenic | 45.0% | |
| ACCGGAGGTAATCCTATTTG+AGG | - | chr3.4:75110455-75110474 | None:intergenic | 45.0% | |
| ACGACCTTAAACTCCCTGTT+AGG | + | chr3.4:75106726-75106745 | MS.gene074391:CDS | 45.0% | |
| AGCATTATGCATGGTCCTAG+AGG | + | chr3.4:75110368-75110387 | MS.gene074391:intron | 45.0% | |
| ATATCCTCTCACCTCTTGCA+GGG | + | chr3.4:75109194-75109213 | MS.gene074391:CDS | 45.0% | |
| CAAAGATGTCATCATGGAGG+AGG | + | chr3.4:75107339-75107358 | MS.gene074391:CDS | 45.0% | |
| CAGAACAAGCCTTTAGCTAG+TGG | - | chr3.4:75110171-75110190 | None:intergenic | 45.0% | |
| CAGGTTTCTCTGTGTAATGC+AGG | - | chr3.4:75107874-75107893 | None:intergenic | 45.0% | |
| CCAACCTAACAGGGAGTTTA+AGG | - | chr3.4:75106733-75106752 | None:intergenic | 45.0% | |
| CCTTAAACTCCCTGTTAGGT+TGG | + | chr3.4:75106730-75106749 | MS.gene074391:intron | 45.0% | |
| CGGAGGTCATACTGTTATCA+CGG | + | chr3.4:75111157-75111176 | MS.gene074391:intron | 45.0% | |
| CTGAGAAGAAACACCCTCAA+TGG | - | chr3.4:75108074-75108093 | None:intergenic | 45.0% | |
| CTGGAGAGACCTTCAAAAAG+AGG | - | chr3.4:75107799-75107818 | None:intergenic | 45.0% | |
| GAAATCCTCCATTGGACGAT+GGG | + | chr3.4:75110098-75110117 | MS.gene074391:CDS | 45.0% | |
| GAAGAACTCCGTCAACATAC+TGG | - | chr3.4:75107419-75107438 | None:intergenic | 45.0% | |
| GAGTGAGATGCTTCTCATAC+AGG | - | chr3.4:75110289-75110308 | None:intergenic | 45.0% | |
| GCCTCAAATAGGATTACCTC+CGG | + | chr3.4:75110451-75110470 | MS.gene074391:intron | 45.0% | |
| GGCATGAAATCCAACCTAAC+AGG | - | chr3.4:75106743-75106762 | None:intergenic | 45.0% | |
| GGCCACTAATCCAACTTAAC+AGG | - | chr3.4:75106994-75107013 | None:intergenic | 45.0% | |
| GGTAAGCTTGCAGCATAAGA+CGG | - | chr3.4:75107987-75108006 | None:intergenic | 45.0% | |
| GTTCTTCTGTAGGAGTCTAC+CGG | + | chr3.4:75109147-75109166 | MS.gene074391:intron | 45.0% | |
| GTTGGATGGAAATCCTCCAT+TGG | + | chr3.4:75110090-75110109 | MS.gene074391:CDS | 45.0% | |
| TAAGATGACCGTGAAAGCCT+TGG | - | chr3.4:75109549-75109568 | None:intergenic | 45.0% | |
| TCAAATAGGATTACCTCCGG+TGG | + | chr3.4:75110454-75110473 | MS.gene074391:intron | 45.0% | |
| TCCCCTCACCTATTAGCAAA+TGG | + | chr3.4:75109405-75109424 | MS.gene074391:CDS | 45.0% | |
| TCTCCACACATACCCACTTA+AGG | - | chr3.4:75108894-75108913 | None:intergenic | 45.0% | |
| TGTCCAGCTAATGGAAAGAG+TGG | - | chr3.4:75106504-75106523 | None:intergenic | 45.0% | |
| TTACTATTAGCATCACCGGC+AGG | + | chr3.4:75110562-75110581 | MS.gene074391:intron | 45.0% | |
| TTGCCTTAAGTGGGTATGTG+TGG | + | chr3.4:75108888-75108907 | MS.gene074391:intron | 45.0% | |
| TTTCCTCTGCCACAAATGCT+GGG | + | chr3.4:75107494-75107513 | MS.gene074391:CDS | 45.0% | |
| TTTGAAGGTCTCTCCAGAGT+CGG | + | chr3.4:75107802-75107821 | MS.gene074391:intron | 45.0% | |
| TTTGCAGATATTGACACGCC+AGG | - | chr3.4:75109902-75109921 | None:intergenic | 45.0% | |
| ! | AACAGGGAGTTTAAGGTCGT+TGG | - | chr3.4:75106726-75106745 | None:intergenic | 45.0% |
| ! | AACTGTTTCTTCCCTGCAAG+AGG | - | chr3.4:75109208-75109227 | None:intergenic | 45.0% |
| ! | CCGACATTTAAGGTCTTGTG+TGG | - | chr3.4:75111295-75111314 | None:intergenic | 45.0% |
| ! | GAGTTTAAGGTCGTTGGAGA+TGG | - | chr3.4:75106720-75106739 | None:intergenic | 45.0% |
| ! | GGGAACAATACTGGTTGTCA+AGG | + | chr3.4:75107698-75107717 | MS.gene074391:CDS | 45.0% |
| ! | TTTTCCTCTGCCACAAATGC+TGG | + | chr3.4:75107493-75107512 | MS.gene074391:CDS | 45.0% |
| !! | ACATCTAGTTCTCTACCCCA+AGG | + | chr3.4:75109529-75109548 | MS.gene074391:intron | 45.0% |
| !! | TTGAGGGTGTTTCTTCTCAG+CGG | + | chr3.4:75108074-75108093 | MS.gene074391:CDS | 45.0% |
| !!! | GTTTTTTTTTTTTTTTTTTT+GGG | - | chr3.4:75110497-75110516 | None:intergenic | 5.0% |
| !!! | TGTTTTTTTTTTTTTTTTTT+TGG | - | chr3.4:75110498-75110517 | None:intergenic | 5.0% |
| AAAATAGGTCCTCGCGGGTA+TGG | - | chr3.4:75109785-75109804 | None:intergenic | 50.0% | |
| AAATAGGTCCTCGCGGGTAT+GGG | - | chr3.4:75109784-75109803 | None:intergenic | 50.0% | |
| AAGCAATGCAGCAGGACACA+AGG | + | chr3.4:75108311-75108330 | MS.gene074391:CDS | 50.0% | |
| AATAGGATTACCTCCGGTGG+AGG | + | chr3.4:75110457-75110476 | MS.gene074391:intron | 50.0% | |
| ACGGATGCACCTTTGCTGAT+GGG | - | chr3.4:75109476-75109495 | None:intergenic | 50.0% | |
| AGATGACCGTGAAAGCCTTG+GGG | - | chr3.4:75109547-75109566 | None:intergenic | 50.0% | |
| AGGTGAATCTGTTGCCGTTG+AGG | + | chr3.4:75111237-75111256 | MS.gene074391:intron | 50.0% | |
| ATAGGATTACCTCCGGTGGA+GGG | + | chr3.4:75110458-75110477 | MS.gene074391:intron | 50.0% | |
| ATCTGTTGCCGTTGAGGATG+AGG | + | chr3.4:75111243-75111262 | MS.gene074391:CDS | 50.0% | |
| CGTCACCCTCAACATTGGTA+TGG | - | chr3.4:75110683-75110702 | None:intergenic | 50.0% | |
| CTAATAGGTGAGGGGATGTG+TGG | - | chr3.4:75109401-75109420 | None:intergenic | 50.0% | |
| CTGCAAGCTTACCTGATTGC+AGG | + | chr3.4:75107994-75108013 | MS.gene074391:intron | 50.0% | |
| CTGCTGCATTGCTTCAAAGC+TGG | - | chr3.4:75108305-75108324 | None:intergenic | 50.0% | |
| CTTGTTCTCATGTCGTGACC+AGG | + | chr3.4:75111217-75111236 | MS.gene074391:intron | 50.0% | |
| GAGAGTTGTGGCGGTTATCA+TGG | + | chr3.4:75106422-75106441 | MS.gene074391:CDS | 50.0% | |
| GATATCCTCTCACCTCTTGC+AGG | + | chr3.4:75109193-75109212 | MS.gene074391:CDS | 50.0% | |
| GCAAATGCTCGTATAGGAGC+TGG | + | chr3.4:75109917-75109936 | MS.gene074391:CDS | 50.0% | |
| GGAAATCCTCCATTGGACGA+TGG | + | chr3.4:75110097-75110116 | MS.gene074391:CDS | 50.0% | |
| GGCCAGTGAATTTGGCGAAT+TGG | + | chr3.4:75107823-75107842 | MS.gene074391:CDS | 50.0% | |
| GTTGTGGCGGTTATCATGGT+TGG | + | chr3.4:75106426-75106445 | MS.gene074391:CDS | 50.0% | |
| TCAACGGCAACAGATTCACC+TGG | - | chr3.4:75111238-75111257 | None:intergenic | 50.0% | |
| TCCATTAGCTGGACAACCCA+TGG | + | chr3.4:75106509-75106528 | MS.gene074391:CDS | 50.0% | |
| TCTCTACCCCAAGGCTTTCA+CGG | + | chr3.4:75109538-75109557 | MS.gene074391:intron | 50.0% | |
| TCTTCTCAGCGGAAAGACAG+AGG | + | chr3.4:75108085-75108104 | MS.gene074391:CDS | 50.0% | |
| TGCAGAAGAGAGAGTTGTGG+CGG | + | chr3.4:75106413-75106432 | MS.gene074391:CDS | 50.0% | |
| TGGTGGCATGGGAACAATAC+TGG | + | chr3.4:75107689-75107708 | MS.gene074391:CDS | 50.0% | |
| TGTCATCATGGAGGAGGATC+CGG | + | chr3.4:75107345-75107364 | MS.gene074391:CDS | 50.0% | |
| TTACCCAGCATTTGTGGCAG+AGG | - | chr3.4:75107500-75107519 | None:intergenic | 50.0% | |
| TTCCAATAGGTTCCCTCCAC+CGG | - | chr3.4:75110473-75110492 | None:intergenic | 50.0% | |
| TTGAAGGAGGACAAGCCTCA+TGG | + | chr3.4:75107292-75107311 | MS.gene074391:CDS | 50.0% | |
| ! | AAAGGTGCATCCGTCTGCAA+AGG | + | chr3.4:75109482-75109501 | MS.gene074391:CDS | 50.0% |
| ! | ACCATGGGTTGTCCAGCTAA+TGG | - | chr3.4:75106513-75106532 | None:intergenic | 50.0% |
| ! | GTGGTTGAACAGATTGGTCC+TGG | + | chr3.4:75109881-75109900 | MS.gene074391:intron | 50.0% |
| ! | TGCAGGAGTTCATTGGTGAC+TGG | - | chr3.4:75107857-75107876 | None:intergenic | 50.0% |
| !! | AGTTGGATTAGTGGCCGGTT+TGG | + | chr3.4:75106998-75107017 | MS.gene074391:intron | 50.0% |
| !! | CAGCTTTGAAGCAATGCAGC+AGG | + | chr3.4:75108303-75108322 | MS.gene074391:CDS | 50.0% |
| ACGGAATCGAGTGCCTTTGG+TGG | - | chr3.4:75106457-75106476 | None:intergenic | 55.0% | |
| AGACCACCAGCAGAACCATG+AGG | - | chr3.4:75107310-75107329 | None:intergenic | 55.0% | |
| CAGCAGTAGGGACGAGAGAA+AGG | - | chr3.4:75107960-75107979 | None:intergenic | 55.0% | |
| CCAGAGTCGGCCAGTGAATT+TGG | + | chr3.4:75107815-75107834 | MS.gene074391:CDS | 55.0% | |
| CGGAATCGAGTGCCTTTGGT+GGG | - | chr3.4:75106456-75106475 | None:intergenic | 55.0% | |
| CTCGTATAGGAGCTGGTGCA+AGG | + | chr3.4:75109924-75109943 | MS.gene074391:CDS | 55.0% | |
| GACGGATGCACCTTTGCTGA+TGG | - | chr3.4:75109477-75109496 | None:intergenic | 55.0% | |
| GGAATCGAGTGCCTTTGGTG+GGG | - | chr3.4:75106455-75106474 | None:intergenic | 55.0% | |
| GTGGCGGTTATCATGGTTGG+AGG | + | chr3.4:75106429-75106448 | MS.gene074391:CDS | 55.0% | |
| TCTTCCCTGCAAGAGGTGAG+AGG | - | chr3.4:75109201-75109220 | None:intergenic | 55.0% | |
| TGCCGTTGAGGATGAGGTAG+TGG | + | chr3.4:75111249-75111268 | MS.gene074391:CDS | 55.0% | |
| TGGACGGAATCGAGTGCCTT+TGG | - | chr3.4:75106460-75106479 | None:intergenic | 55.0% | |
| ! | AAGCCTCATGGTTCTGCTGG+TGG | + | chr3.4:75107304-75107323 | MS.gene074391:CDS | 55.0% |
| ! | CCAAATTCACTGGCCGACTC+TGG | - | chr3.4:75107818-75107837 | None:intergenic | 55.0% |
| ! | GACAAGCCTCATGGTTCTGC+TGG | + | chr3.4:75107301-75107320 | MS.gene074391:CDS | 55.0% |
| ACGTGCCCATCGTCCAATGG+AGG | - | chr3.4:75110106-75110125 | None:intergenic | 60.0% | |
| ATGGTTGGAGGCCCCACCAA+AGG | + | chr3.4:75106441-75106460 | MS.gene074391:CDS | 60.0% | |
| CAATAGGTTCCCTCCACCGG+AGG | - | chr3.4:75110470-75110489 | None:intergenic | 60.0% | |
| CTCCGGTGGAGGGAACCTAT+TGG | + | chr3.4:75110468-75110487 | MS.gene074391:intron | 60.0% | |
| GACACGTGCCCATCGTCCAA+TGG | - | chr3.4:75110109-75110128 | None:intergenic | 60.0% | |
| GGGCACGTCACCCTCAACAT+TGG | - | chr3.4:75110688-75110707 | None:intergenic | 60.0% | |
| TGGACGATGGGCACGTGTCC+AGG | + | chr3.4:75110110-75110129 | MS.gene074391:CDS | 65.0% | |
| ACTCCCTGCCCATACCCGCG+AGG | + | chr3.4:75109773-75109792 | MS.gene074391:intron | 70.0% | |
| AGGTCCTCGCGGGTATGGGC+AGG | - | chr3.4:75109780-75109799 | None:intergenic | 70.0% | |
| CGCGGGTATGGGCAGGGAGT+AGG | - | chr3.4:75109773-75109792 | None:intergenic | 70.0% | |
| GGTCCTCGCGGGTATGGGCA+GGG | - | chr3.4:75109779-75109798 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 75106405 | 75111339 | 75106405 | ID=MS.gene074391 |
| chr3.4 | mRNA | 75106405 | 75111339 | 75106405 | ID=MS.gene074391.t1;Parent=MS.gene074391 |
| chr3.4 | exon | 75106405 | 75106560 | 75106405 | ID=MS.gene074391.t1.exon1;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75106405 | 75106560 | 75106405 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75106647 | 75106747 | 75106647 | ID=MS.gene074391.t1.exon2;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75106647 | 75106747 | 75106647 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75107288 | 75107366 | 75107288 | ID=MS.gene074391.t1.exon3;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75107288 | 75107366 | 75107288 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75107455 | 75107515 | 75107455 | ID=MS.gene074391.t1.exon4;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75107455 | 75107515 | 75107455 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75107673 | 75107719 | 75107673 | ID=MS.gene074391.t1.exon5;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75107673 | 75107719 | 75107673 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75107809 | 75107901 | 75107809 | ID=MS.gene074391.t1.exon6;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75107809 | 75107901 | 75107809 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75108016 | 75108106 | 75108016 | ID=MS.gene074391.t1.exon7;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75108016 | 75108106 | 75108016 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75108284 | 75108332 | 75108284 | ID=MS.gene074391.t1.exon8;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75108284 | 75108332 | 75108284 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75109159 | 75109275 | 75109159 | ID=MS.gene074391.t1.exon9;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75109159 | 75109275 | 75109159 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75109356 | 75109503 | 75109356 | ID=MS.gene074391.t1.exon10;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75109356 | 75109503 | 75109356 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75109893 | 75109985 | 75109893 | ID=MS.gene074391.t1.exon11;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75109893 | 75109985 | 75109893 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75110063 | 75110131 | 75110063 | ID=MS.gene074391.t1.exon12;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75110063 | 75110131 | 75110063 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75110813 | 75110855 | 75110813 | ID=MS.gene074391.t1.exon13;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75110813 | 75110855 | 75110813 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| chr3.4 | exon | 75111239 | 75111339 | 75111239 | ID=MS.gene074391.t1.exon14;Parent=MS.gene074391.t1 |
| chr3.4 | CDS | 75111239 | 75111339 | 75111239 | ID=cds.MS.gene074391.t1;Parent=MS.gene074391.t1 |
| Gene Sequence |
| Protein sequence |
