Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074401.t1 | XP_013461068.1 | 97 | 165 | 5 | 0 | 1 | 165 | 1 | 165 | 2.00E-82 | 315.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074401.t1 | Q28GF5 | 41.3 | 121 | 70 | 1 | 46 | 165 | 16 | 136 | 3.8e-18 | 92.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074401.t1 | I3T390 | 97.0 | 165 | 5 | 0 | 1 | 165 | 1 | 165 | 1.4e-82 | 315.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene074401 | 0.842507 | 2.48E-58 | -1.69E-46 |
| MS.gene050752 | MS.gene074401 | 0.835706 | 1.44E-56 | -1.69E-46 |
| MS.gene050838 | MS.gene074401 | 0.821642 | 3.62E-53 | -1.69E-46 |
| MS.gene050955 | MS.gene074401 | 0.822127 | 2.80E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene074401 | 0.853089 | 3.01E-61 | -1.69E-46 |
| MS.gene051234 | MS.gene074401 | 0.853729 | 1.97E-61 | -1.69E-46 |
| MS.gene052072 | MS.gene074401 | 0.803346 | 3.64E-49 | -1.69E-46 |
| MS.gene052296 | MS.gene074401 | 0.800394 | 1.47E-48 | -1.69E-46 |
| MS.gene054004 | MS.gene074401 | 0.83381 | 4.31E-56 | -1.69E-46 |
| MS.gene054005 | MS.gene074401 | 0.839502 | 1.52E-57 | -1.69E-46 |
| MS.gene054403 | MS.gene074401 | 0.83724 | 5.84E-57 | -1.69E-46 |
| MS.gene058245 | MS.gene074401 | 0.801784 | 7.65E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene074401 | 0.802217 | 6.23E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene074401 | 0.809739 | 1.63E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074401.t1 | MTR_3g078663 | 96.970 | 165 | 5 | 0 | 1 | 165 | 1 | 165 | 2.60e-117 | 328 |
| MS.gene074401.t1 | MTR_1g083990 | 84.181 | 177 | 16 | 1 | 1 | 165 | 296 | 472 | 7.53e-95 | 283 |
| MS.gene074401.t1 | MTR_2g069440 | 76.471 | 51 | 6 | 1 | 110 | 160 | 35 | 79 | 2.88e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074401.t1 | AT1G34350 | 71.166 | 163 | 47 | 0 | 3 | 165 | 1 | 163 | 2.06e-82 | 240 |
| MS.gene074401.t1 | AT1G34350 | 61.170 | 188 | 48 | 1 | 3 | 165 | 1 | 188 | 3.26e-76 | 226 |
Find 27 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGAGACTTAATAGTATTC+TGG | 0.230596 | 3.4:+75213681 | MS.gene074401:CDS |
| CTGAAAGTTGGTATTCTTCC+TGG | 0.303474 | 3.4:-75210016 | None:intergenic |
| GTTTCAGGAACCTTGGCTAC+TGG | 0.315298 | 3.4:+75209948 | MS.gene074401:intron |
| GAGTATTTATGTCAGTTCTT+TGG | 0.365618 | 3.4:+75213752 | MS.gene074401:CDS |
| TTTATGTCAGTTCTTTGGTC+TGG | 0.387486 | 3.4:+75213757 | MS.gene074401:CDS |
| GTTTCTTTCATGCTATTGAT+TGG | 0.393651 | 3.4:+75209214 | MS.gene074401:CDS |
| TGCATTCGCTATGATAATCT+TGG | 0.397468 | 3.4:+75213789 | MS.gene074401:CDS |
| TTTCAGGAACCTTGGCTACT+GGG | 0.415351 | 3.4:+75209949 | MS.gene074401:intron |
| TATGTTACTTGATTGTTAAG+TGG | 0.415739 | 3.4:+75213952 | MS.gene074401:CDS |
| GAGAGACTTAATAGTATTCT+GGG | 0.439923 | 3.4:+75213682 | MS.gene074401:CDS |
| CTTTCATGCTATTGATTGGA+AGG | 0.458422 | 3.4:+75209218 | MS.gene074401:CDS |
| AATGCTACGTACACGTCAAA+AGG | 0.482328 | 3.4:-75210050 | None:intergenic |
| CTTAACAATCAAGTAACATA+AGG | 0.491135 | 3.4:-75213949 | None:intergenic |
| TTCTTGCGATTATTGTCTCC+AGG | 0.499806 | 3.4:+75209998 | MS.gene074401:CDS |
| GAACAAGCACATCTGAAAGT+TGG | 0.517575 | 3.4:-75210028 | None:intergenic |
| CGATGAACTGAAATCTGCTA+TGG | 0.524498 | 3.4:+75209101 | MS.gene074401:CDS |
| AAGGGCTGCTCGTAGTAAGC+AGG | 0.566315 | 3.4:+75214001 | MS.gene074401:CDS |
| CTGAACTAAGACATCGTGCA+AGG | 0.578215 | 3.4:+75213982 | MS.gene074401:CDS |
| GTTAACAATCCCAGTAGCCA+AGG | 0.583367 | 3.4:-75209958 | None:intergenic |
| ATCATAGCGAATGCAAGAAG+AGG | 0.591910 | 3.4:-75213781 | None:intergenic |
| ACTGACATAAATACTCCACT+TGG | 0.602088 | 3.4:-75213745 | None:intergenic |
| TCGCAAGAAGCAATAGAACA+TGG | 0.614827 | 3.4:-75209984 | None:intergenic |
| TGAACTGAAATCTGCTATGG+AGG | 0.630102 | 3.4:+75209104 | MS.gene074401:CDS |
| AGAGACTTAATAGTATTCTG+GGG | 0.632890 | 3.4:+75213683 | MS.gene074401:CDS |
| TGAACTAAGACATCGTGCAA+GGG | 0.640138 | 3.4:+75213983 | MS.gene074401:CDS |
| TTTCAGTTCATCGATCGACA+TGG | 0.652553 | 3.4:-75209091 | None:intergenic |
| GAGACTTAATAGTATTCTGG+GGG | 0.682914 | 3.4:+75213684 | MS.gene074401:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAGTTTTAAGAATAAATA+GGG | + | chr3.4:75213277-75213296 | MS.gene074401:intron | 10.0% |
| !!! | TTTCAATTATCTATTTATTT+TGG | + | chr3.4:75209355-75209374 | MS.gene074401:intron | 10.0% |
| !!! | TTTGATATAATATGATTTTA+TGG | + | chr3.4:75209808-75209827 | MS.gene074401:intron | 10.0% |
| !! | AAATAAATATATCTATCTTG+TGG | + | chr3.4:75211705-75211724 | MS.gene074401:intron | 15.0% |
| !! | AAGATATAATTGAATTGATA+GGG | + | chr3.4:75210814-75210833 | MS.gene074401:intron | 15.0% |
| !! | AATATTATTCTGTAATCAAA+AGG | + | chr3.4:75211093-75211112 | MS.gene074401:intron | 15.0% |
| !! | ACATTCCATAAAATTAAAAA+AGG | - | chr3.4:75210076-75210095 | None:intergenic | 15.0% |
| !! | ATAGATATATTTATTTGATG+AGG | - | chr3.4:75211701-75211720 | None:intergenic | 15.0% |
| !! | ATATTATTCTGTAATCAAAA+GGG | + | chr3.4:75211094-75211113 | MS.gene074401:intron | 15.0% |
| !! | TAAGATATAATTGAATTGAT+AGG | + | chr3.4:75210813-75210832 | MS.gene074401:intron | 15.0% |
| !! | TCATATTGAATATTAACTAT+CGG | + | chr3.4:75213859-75213878 | MS.gene074401:intron | 15.0% |
| !! | TGATATAGAAGAATAAAATA+GGG | - | chr3.4:75211125-75211144 | None:intergenic | 15.0% |
| !!! | AAATTTCTAAAATGAGAAAA+TGG | - | chr3.4:75209878-75209897 | None:intergenic | 15.0% |
| !!! | GTTAAGTTTTAAGAATAAAT+AGG | + | chr3.4:75213276-75213295 | MS.gene074401:intron | 15.0% |
| !!! | TAAATATTTCTTTTAGAATG+AGG | + | chr3.4:75210522-75210541 | MS.gene074401:intron | 15.0% |
| !!! | TAAGTTTTAAGAATAAATAG+GGG | + | chr3.4:75213278-75213297 | MS.gene074401:intron | 15.0% |
| !!! | TATTTTTGAGAAAAAAATAC+AGG | - | chr3.4:75212996-75213015 | None:intergenic | 15.0% |
| !!! | TCTTTATTTTTTTTTGTTTC+AGG | + | chr3.4:75209933-75209952 | MS.gene074401:intron | 15.0% |
| !!! | TGTTTTTGAATAAACTATAA+AGG | + | chr3.4:75210096-75210115 | MS.gene074401:intron | 15.0% |
| !!! | TTAAGTTTTACGAATAAATA+GGG | + | chr3.4:75210981-75211000 | MS.gene074401:intron | 15.0% |
| !! | AAAAATAAGTAAATCCAAAC+AGG | - | chr3.4:75209541-75209560 | None:intergenic | 20.0% |
| !! | AAAATAGAGAGATATAGATA+TGG | + | chr3.4:75211601-75211620 | MS.gene074401:intron | 20.0% |
| !! | ATAATTAATTAAGTCAGTAG+TGG | + | chr3.4:75210954-75210973 | MS.gene074401:intron | 20.0% |
| !! | ATTATGTAGTCTATTCAATT+TGG | + | chr3.4:75210277-75210296 | MS.gene074401:intron | 20.0% |
| !! | CTGATATAGAAGAATAAAAT+AGG | - | chr3.4:75211126-75211145 | None:intergenic | 20.0% |
| !! | TAATTAATTAAGTCAGTAGT+GGG | + | chr3.4:75210955-75210974 | MS.gene074401:intron | 20.0% |
| !!! | ATTCACTCTTTTGAAAATTT+TGG | - | chr3.4:75210461-75210480 | None:intergenic | 20.0% |
| !!! | GCATTCCTTTTTTAATTTTA+TGG | + | chr3.4:75210068-75210087 | MS.gene074401:intron | 20.0% |
| !!! | GTTAAGTTTTACGAATAAAT+AGG | + | chr3.4:75210980-75210999 | MS.gene074401:intron | 20.0% |
| !!! | TAAGTTTTACGAATAAATAG+GGG | + | chr3.4:75210982-75211001 | MS.gene074401:intron | 20.0% |
| !!! | TATTCAATTTGGTAACATTA+CGG | + | chr3.4:75210288-75210307 | MS.gene074401:intron | 20.0% |
| !!! | TTCACTCTTTTGAAAATTTT+GGG | - | chr3.4:75210460-75210479 | None:intergenic | 20.0% |
| !!! | TTTATGGATCATATTACTTT+TGG | + | chr3.4:75209824-75209843 | MS.gene074401:intron | 20.0% |
| !!! | TTTTATTCTTCTATATCAGT+TGG | + | chr3.4:75211127-75211146 | MS.gene074401:intron | 20.0% |
| !!! | TTTTCAAAAGAGTGAATATA+TGG | + | chr3.4:75210464-75210483 | MS.gene074401:intron | 20.0% |
| ! | AATGTAGAAAATTAAAGGCA+GGG | - | chr3.4:75210209-75210228 | None:intergenic | 25.0% |
| ! | AGAAAGTTAAGCTACATTAT+TGG | - | chr3.4:75213625-75213644 | None:intergenic | 25.0% |
| ! | AGTAGTTAATTATGCAGTTA+TGG | + | chr3.4:75210910-75210929 | MS.gene074401:intron | 25.0% |
| ! | ATAATGTAGCTTAACTTTCT+TGG | + | chr3.4:75213625-75213644 | MS.gene074401:intron | 25.0% |
| ! | ATATTTCCTTCCTTAATCAA+TGG | + | chr3.4:75212742-75212761 | MS.gene074401:intron | 25.0% |
| ! | CGAAGCAATAAAAAAGAATA+AGG | - | chr3.4:75209305-75209324 | None:intergenic | 25.0% |
| ! | CTTAACAATCAAGTAACATA+AGG | - | chr3.4:75213952-75213971 | None:intergenic | 25.0% |
| ! | TGCAATAAAGAAATGAGAAT+GGG | + | chr3.4:75212925-75212944 | MS.gene074401:intron | 25.0% |
| ! | TTATGGAGTTTAATTGAATG+TGG | + | chr3.4:75209329-75209348 | MS.gene074401:intron | 25.0% |
| ! | TTGCAATAAAGAAATGAGAA+TGG | + | chr3.4:75212924-75212943 | MS.gene074401:intron | 25.0% |
| !! | TATGTTACTTGATTGTTAAG+TGG | + | chr3.4:75213952-75213971 | MS.gene074401:CDS | 25.0% |
| !! | TTTTATTGCTTCGTCAATTA+TGG | + | chr3.4:75209312-75209331 | MS.gene074401:intron | 25.0% |
| !!! | ATTTATTTGGCGTTTTAAAC+CGG | + | chr3.4:75211408-75211427 | MS.gene074401:intron | 25.0% |
| !!! | GAACTTCATTTTTGTGAAAT+TGG | + | chr3.4:75212411-75212430 | MS.gene074401:intron | 25.0% |
| !!! | TGCCTTTAATTTTCTACATT+GGG | + | chr3.4:75210209-75210228 | MS.gene074401:intron | 25.0% |
| !!! | TTGTATAAGTTGTTTTGCAT+AGG | + | chr3.4:75209617-75209636 | MS.gene074401:intron | 25.0% |
| AAACTCCATTTCTACCATAA+CGG | - | chr3.4:75211197-75211216 | None:intergenic | 30.0% | |
| AACTTACATATGTGACAAGA+TGG | + | chr3.4:75212635-75212654 | MS.gene074401:intron | 30.0% | |
| AATAATATTGCAGAACTTCG+AGG | - | chr3.4:75211082-75211101 | None:intergenic | 30.0% | |
| ACAAACAGAGTATATGATCA+AGG | + | chr3.4:75213021-75213040 | MS.gene074401:intron | 30.0% | |
| ACAAATAAATAAGCTTGTCG+AGG | - | chr3.4:75209601-75209620 | None:intergenic | 30.0% | |
| AGAGACTTAATAGTATTCTG+GGG | + | chr3.4:75213683-75213702 | MS.gene074401:CDS | 30.0% | |
| AGATGTAAGCACTAAAAACA+TGG | - | chr3.4:75210792-75210811 | None:intergenic | 30.0% | |
| AGGAAGGAAATATCTAAGAA+AGG | - | chr3.4:75212735-75212754 | None:intergenic | 30.0% | |
| AGTTGAAGTTTGAATACCTA+TGG | + | chr3.4:75210676-75210695 | MS.gene074401:intron | 30.0% | |
| ATAATATTGCAGAACTTCGA+GGG | - | chr3.4:75211081-75211100 | None:intergenic | 30.0% | |
| ATTGAATTGATAGGGAAGAA+TGG | + | chr3.4:75210822-75210841 | MS.gene074401:intron | 30.0% | |
| ATTTCAAAACTTCCAGACAA+AGG | + | chr3.4:75211795-75211814 | MS.gene074401:intron | 30.0% | |
| CAATGTAGAAAATTAAAGGC+AGG | - | chr3.4:75210210-75210229 | None:intergenic | 30.0% | |
| CACCCAATGTAGAAAATTAA+AGG | - | chr3.4:75210214-75210233 | None:intergenic | 30.0% | |
| CCTAAAAAGTTATCTTTAGC+AGG | - | chr3.4:75209195-75209214 | None:intergenic | 30.0% | |
| CGAATTATTAAGTACCTCAA+AGG | + | chr3.4:75212138-75212157 | MS.gene074401:intron | 30.0% | |
| GAAAACATAAAACTGACATC+AGG | - | chr3.4:75213573-75213592 | None:intergenic | 30.0% | |
| GACAATATTAGTAAGTTTGC+AGG | - | chr3.4:75209915-75209934 | None:intergenic | 30.0% | |
| GAGAGACTTAATAGTATTCT+GGG | + | chr3.4:75213682-75213701 | MS.gene074401:CDS | 30.0% | |
| GAGTATTTATGTCAGTTCTT+TGG | + | chr3.4:75213752-75213771 | MS.gene074401:CDS | 30.0% | |
| GATGTAAGCACTAAAAACAT+GGG | - | chr3.4:75210791-75210810 | None:intergenic | 30.0% | |
| GCAATAAAGAAATGAGAATG+GGG | + | chr3.4:75212926-75212945 | MS.gene074401:intron | 30.0% | |
| GTTTCTTTCATGCTATTGAT+TGG | + | chr3.4:75209214-75209233 | MS.gene074401:CDS | 30.0% | |
| TAGGAAGAAGCTTTACATTA+GGG | - | chr3.4:75211963-75211982 | None:intergenic | 30.0% | |
| TAGTAAAGATATCAGCAAGT+TGG | - | chr3.4:75212593-75212612 | None:intergenic | 30.0% | |
| TCAAAGCATGATAGGATAAA+TGG | - | chr3.4:75210416-75210435 | None:intergenic | 30.0% | |
| TCGCTACTAAATTGAACTTA+GGG | + | chr3.4:75209515-75209534 | MS.gene074401:intron | 30.0% | |
| TCTTAGAGAGAAGATTATCA+CGG | + | chr3.4:75212533-75212552 | MS.gene074401:intron | 30.0% | |
| TGAGAGACTTAATAGTATTC+TGG | + | chr3.4:75213681-75213700 | MS.gene074401:CDS | 30.0% | |
| TGTCTATCTGATACAAGTTT+AGG | - | chr3.4:75210749-75210768 | None:intergenic | 30.0% | |
| TTAGGAAGAAGCTTTACATT+AGG | - | chr3.4:75211964-75211983 | None:intergenic | 30.0% | |
| TTATGATATCATTCACCTTG+AGG | + | chr3.4:75213111-75213130 | MS.gene074401:intron | 30.0% | |
| TTCGCTACTAAATTGAACTT+AGG | + | chr3.4:75209514-75209533 | MS.gene074401:intron | 30.0% | |
| TTTATCCTATCATGCTTTGA+TGG | + | chr3.4:75210416-75210435 | MS.gene074401:intron | 30.0% | |
| ! | CCTGCTAAAGATAACTTTTT+AGG | + | chr3.4:75209192-75209211 | MS.gene074401:CDS | 30.0% |
| ! | TCAATCACTTCCATTGATTA+AGG | - | chr3.4:75212755-75212774 | None:intergenic | 30.0% |
| ! | TCAGGTTATTGTGTTTTCAT+TGG | + | chr3.4:75212264-75212283 | MS.gene074401:intron | 30.0% |
| ! | TCATTTTCCATGCACATATT+TGG | + | chr3.4:75213530-75213549 | MS.gene074401:intron | 30.0% |
| ! | TGTCATGTTTTGTACTTGTT+TGG | + | chr3.4:75209422-75209441 | MS.gene074401:intron | 30.0% |
| ! | TTTTTGTGAAATTGGTCCAA+TGG | + | chr3.4:75212419-75212438 | MS.gene074401:intron | 30.0% |
| !! | ATTTTGGCATTTTGGCATTA+GGG | + | chr3.4:75213350-75213369 | MS.gene074401:intron | 30.0% |
| !! | CTGCCTTTAATTTTCTACAT+TGG | + | chr3.4:75210208-75210227 | MS.gene074401:intron | 30.0% |
| !! | GGTGATAAGTTGATTATCAT+GGG | - | chr3.4:75210188-75210207 | None:intergenic | 30.0% |
| !! | GTGATAAGTTGATTATCATG+GGG | - | chr3.4:75210187-75210206 | None:intergenic | 30.0% |
| !!! | CAAAACTATTTTGATCCAAG+TGG | + | chr3.4:75213730-75213749 | MS.gene074401:CDS | 30.0% |
| !!! | TTTTTTTGTTTCAGGAACCT+TGG | + | chr3.4:75209941-75209960 | MS.gene074401:intron | 30.0% |
| AACCACTGAGTTGTCAAATA+GGG | + | chr3.4:75209758-75209777 | MS.gene074401:intron | 35.0% | |
| AAGAATAAATAGGGGAGAGA+AGG | + | chr3.4:75213286-75213305 | MS.gene074401:intron | 35.0% | |
| AATTGATAGGGAAGAATGGA+TGG | + | chr3.4:75210826-75210845 | MS.gene074401:intron | 35.0% | |
| ACCATAATGGTTGTGACATA+AGG | - | chr3.4:75213826-75213845 | None:intergenic | 35.0% | |
| ACTGACATAAATACTCCACT+TGG | - | chr3.4:75213748-75213767 | None:intergenic | 35.0% | |
| AGAATAAATAGGGGAGAGAA+GGG | + | chr3.4:75213287-75213306 | MS.gene074401:intron | 35.0% | |
| AGCAATACCTAACTTTGACT+GGG | - | chr3.4:75211860-75211879 | None:intergenic | 35.0% | |
| AGGTTTGGAAGATGTAGAAA+TGG | + | chr3.4:75211576-75211595 | MS.gene074401:intron | 35.0% | |
| ATGCTAAAAGAGAAGGTTTG+CGG | - | chr3.4:75209270-75209289 | None:intergenic | 35.0% | |
| ATTACAGGTGATGACAATGA+GGG | + | chr3.4:75211748-75211767 | MS.gene074401:intron | 35.0% | |
| CAATCTTTATCCCACTAAGT+GGG | - | chr3.4:75210337-75210356 | None:intergenic | 35.0% | |
| CACAATCATGACATGCATAT+GGG | - | chr3.4:75212863-75212882 | None:intergenic | 35.0% | |
| CATAATGGTTGTGACATAAG+GGG | - | chr3.4:75213824-75213843 | None:intergenic | 35.0% | |
| CCATAATGGTTGTGACATAA+GGG | - | chr3.4:75213825-75213844 | None:intergenic | 35.0% | |
| CTAATGCCAAAATGCCAAAA+TGG | - | chr3.4:75213351-75213370 | None:intergenic | 35.0% | |
| CTAGTTCGATAGCTATTTAG+AGG | + | chr3.4:75210601-75210620 | MS.gene074401:intron | 35.0% | |
| CTTAGAGAGAAGATTATCAC+GGG | + | chr3.4:75212534-75212553 | MS.gene074401:intron | 35.0% | |
| GAGACTTAATAGTATTCTGG+GGG | + | chr3.4:75213684-75213703 | MS.gene074401:CDS | 35.0% | |
| GAGAGAAATGCTAAAAGAGA+AGG | - | chr3.4:75209277-75209296 | None:intergenic | 35.0% | |
| GGTTTGGAAGATGTAGAAAT+GGG | + | chr3.4:75211577-75211596 | MS.gene074401:intron | 35.0% | |
| GTAAAGCTTCTTCCTAATCA+GGG | + | chr3.4:75211967-75211986 | MS.gene074401:intron | 35.0% | |
| GTATACACCAAATATGTGCA+TGG | - | chr3.4:75213540-75213559 | None:intergenic | 35.0% | |
| GTATATCTTCTCTACACCAT+AGG | - | chr3.4:75210695-75210714 | None:intergenic | 35.0% | |
| GTGAATAGGCAACCATATAT+AGG | - | chr3.4:75212788-75212807 | None:intergenic | 35.0% | |
| GTTTGGAAGATGTAGAAATG+GGG | + | chr3.4:75211578-75211597 | MS.gene074401:intron | 35.0% | |
| TAAAGCTTCTTCCTAATCAG+GGG | + | chr3.4:75211968-75211987 | MS.gene074401:intron | 35.0% | |
| TAGCAATACCTAACTTTGAC+TGG | - | chr3.4:75211861-75211880 | None:intergenic | 35.0% | |
| TATTATCTTAGCCACTGATC+AGG | + | chr3.4:75210555-75210574 | MS.gene074401:intron | 35.0% | |
| TATTCTCTGTACAGAATGTG+AGG | - | chr3.4:75212810-75212829 | None:intergenic | 35.0% | |
| TCAATCTTTATCCCACTAAG+TGG | - | chr3.4:75210338-75210357 | None:intergenic | 35.0% | |
| TCACATATGTAAGTTATCCG+AGG | - | chr3.4:75212630-75212649 | None:intergenic | 35.0% | |
| TGCATTCGCTATGATAATCT+TGG | + | chr3.4:75213789-75213808 | MS.gene074401:CDS | 35.0% | |
| TGTAAAGCTTCTTCCTAATC+AGG | + | chr3.4:75211966-75211985 | MS.gene074401:intron | 35.0% | |
| TGTTCTCGCTTGCATTTATT+TGG | + | chr3.4:75211395-75211414 | MS.gene074401:intron | 35.0% | |
| TTATCACACACAAGTTCCAT+TGG | - | chr3.4:75212438-75212457 | None:intergenic | 35.0% | |
| TTCGCTATGATAATCTTGGT+TGG | + | chr3.4:75213793-75213812 | MS.gene074401:intron | 35.0% | |
| TTGCTGTAGTCTATTCTGTT+TGG | + | chr3.4:75210367-75210386 | MS.gene074401:intron | 35.0% | |
| TTGGATATTCAGATGCTGAT+TGG | + | chr3.4:75212211-75212230 | MS.gene074401:intron | 35.0% | |
| TTGGTGGAAATTTGATCTCA+TGG | + | chr3.4:75212283-75212302 | MS.gene074401:intron | 35.0% | |
| TTTATGTCAGTTCTTTGGTC+TGG | + | chr3.4:75213757-75213776 | MS.gene074401:CDS | 35.0% | |
| TTTCTATCAGAGTGGAACTT+TGG | + | chr3.4:75213454-75213473 | MS.gene074401:intron | 35.0% | |
| TTTGTACTTGTTTGGACTGT+TGG | + | chr3.4:75209430-75209449 | MS.gene074401:intron | 35.0% | |
| ! | ATCAGTTGGTTTCTATCAAC+TGG | + | chr3.4:75211141-75211160 | MS.gene074401:intron | 35.0% |
| ! | CAGGAAAGAATACAGTGTTT+TGG | + | chr3.4:75210646-75210665 | MS.gene074401:intron | 35.0% |
| ! | CTTTCATGCTATTGATTGGA+AGG | + | chr3.4:75209218-75209237 | MS.gene074401:CDS | 35.0% |
| ! | GGTTATTGTGTTTTCATTGG+TGG | + | chr3.4:75212267-75212286 | MS.gene074401:intron | 35.0% |
| ! | TAGGTATTGCTATCTCTCAA+AGG | + | chr3.4:75211869-75211888 | MS.gene074401:intron | 35.0% |
| ! | TCACTTCCATTGATTAAGGA+AGG | - | chr3.4:75212751-75212770 | None:intergenic | 35.0% |
| ! | TGGATATTCAGATGCTGATT+GGG | + | chr3.4:75212212-75212231 | MS.gene074401:intron | 35.0% |
| ! | TTAATTAAGTCAGTAGTGGG+AGG | + | chr3.4:75210958-75210977 | MS.gene074401:intron | 35.0% |
| !! | CATTTTGGCATTTTGGCATT+AGG | + | chr3.4:75213349-75213368 | MS.gene074401:intron | 35.0% |
| !! | GGGTGATAAGTTGATTATCA+TGG | - | chr3.4:75210189-75210208 | None:intergenic | 35.0% |
| !! | TAAGTTGATTATCATGGGGA+AGG | - | chr3.4:75210183-75210202 | None:intergenic | 35.0% |
| !! | TCTTGGAAATTGTTTTGCAG+TGG | + | chr3.4:75213642-75213661 | MS.gene074401:intron | 35.0% |
| AAAGATGACCGTCACCATAA+TGG | - | chr3.4:75213839-75213858 | None:intergenic | 40.0% | |
| AAAGATTCACCTTGTCCTCA+AGG | - | chr3.4:75213129-75213148 | None:intergenic | 40.0% | |
| AAAGCTTCTTCCTAATCAGG+GGG | + | chr3.4:75211969-75211988 | MS.gene074401:intron | 40.0% | |
| AACCTCCTTTGTCAATTCCA+AGG | + | chr3.4:75212566-75212585 | MS.gene074401:intron | 40.0% | |
| AACTGCTCCAATTCAGTTTC+AGG | - | chr3.4:75211475-75211494 | None:intergenic | 40.0% | |
| AACTTCCAGACAAAGGACTT+AGG | + | chr3.4:75211802-75211821 | MS.gene074401:intron | 40.0% | |
| AAGCACTAAAAACATGGGCA+TGG | - | chr3.4:75210786-75210805 | None:intergenic | 40.0% | |
| AATGCTACGTACACGTCAAA+AGG | - | chr3.4:75210053-75210072 | None:intergenic | 40.0% | |
| AATGGAACAGGAGAGCAAAA+CGG | + | chr3.4:75212885-75212904 | MS.gene074401:intron | 40.0% | |
| AATTGAACTTAGGGCCTGTT+TGG | + | chr3.4:75209524-75209543 | MS.gene074401:intron | 40.0% | |
| ACAGACACAAGAATGCACAA+TGG | - | chr3.4:75213510-75213529 | None:intergenic | 40.0% | |
| ACATTGGGTGAAATACTGAG+CGG | + | chr3.4:75210224-75210243 | MS.gene074401:intron | 40.0% | |
| ACCACTGAGTTGTCAAATAG+GGG | + | chr3.4:75209759-75209778 | MS.gene074401:intron | 40.0% | |
| ACCGCGGATTTGTATTAATC+AGG | - | chr3.4:75209671-75209690 | None:intergenic | 40.0% | |
| ACGAATAAATAGGGGAGAGA+AGG | + | chr3.4:75210990-75211009 | MS.gene074401:intron | 40.0% | |
| AGAGATAAGGGGAACTACTA+TGG | + | chr3.4:75212951-75212970 | MS.gene074401:intron | 40.0% | |
| AGAGGAACCTGAAACTGAAT+TGG | + | chr3.4:75211465-75211484 | MS.gene074401:intron | 40.0% | |
| AGAGGCAACACTGATATCAT+TGG | + | chr3.4:75212192-75212211 | MS.gene074401:intron | 40.0% | |
| AGATATGTCAGGTCTAGTCA+TGG | - | chr3.4:75212052-75212071 | None:intergenic | 40.0% | |
| AGCTTTACATTAGGGTCCAT+AGG | - | chr3.4:75211955-75211974 | None:intergenic | 40.0% | |
| AGGACAAGGTGAATCTTTAG+GGG | + | chr3.4:75213131-75213150 | MS.gene074401:intron | 40.0% | |
| AGGTGGTGCATATACATCAT+AGG | - | chr3.4:75212664-75212683 | None:intergenic | 40.0% | |
| ATACAGGATGATTGATGTCG+CGG | - | chr3.4:75212980-75212999 | None:intergenic | 40.0% | |
| ATCATAGCGAATGCAAGAAG+AGG | - | chr3.4:75213784-75213803 | None:intergenic | 40.0% | |
| ATGCCAAGAAAGTAACGAAG+AGG | - | chr3.4:75211829-75211848 | None:intergenic | 40.0% | |
| ATGGCAAAGAAGATGCATAC+TGG | + | chr3.4:75211227-75211246 | MS.gene074401:intron | 40.0% | |
| ATGTATATGCACCACCTTGA+GGG | + | chr3.4:75212667-75212686 | MS.gene074401:intron | 40.0% | |
| CAACCACTGAGTTGTCAAAT+AGG | + | chr3.4:75209757-75209776 | MS.gene074401:intron | 40.0% | |
| CAGACACAAGAATGCACAAT+GGG | - | chr3.4:75213509-75213528 | None:intergenic | 40.0% | |
| CATGATTGTGGAAATGGAAC+AGG | + | chr3.4:75212873-75212892 | MS.gene074401:intron | 40.0% | |
| CCACAATCATGACATGCATA+TGG | - | chr3.4:75212864-75212883 | None:intergenic | 40.0% | |
| CCATATGCATGTCATGATTG+TGG | + | chr3.4:75212861-75212880 | MS.gene074401:intron | 40.0% | |
| CCCTGATTAATACAAATCCG+CGG | + | chr3.4:75209667-75209686 | MS.gene074401:intron | 40.0% | |
| CCCTTATGTCACAACCATTA+TGG | + | chr3.4:75213822-75213841 | MS.gene074401:intron | 40.0% | |
| CCGCGGATTTGTATTAATCA+GGG | - | chr3.4:75209670-75209689 | None:intergenic | 40.0% | |
| CGAATAAATAGGGGAGAGAA+GGG | + | chr3.4:75210991-75211010 | MS.gene074401:intron | 40.0% | |
| CGATGAACTGAAATCTGCTA+TGG | + | chr3.4:75209101-75209120 | MS.gene074401:CDS | 40.0% | |
| CGCGGATTTGTATTAATCAG+GGG | - | chr3.4:75209669-75209688 | None:intergenic | 40.0% | |
| CTAAATCTCTACGAAGTCCT+CGG | + | chr3.4:75212610-75212629 | MS.gene074401:intron | 40.0% | |
| CTGACTGGAAAAGATATGTC+AGG | - | chr3.4:75212063-75212082 | None:intergenic | 40.0% | |
| CTTCAAACAGAAGTGAAGTG+AGG | - | chr3.4:75210154-75210173 | None:intergenic | 40.0% | |
| GAACAAGCACATCTGAAAGT+TGG | - | chr3.4:75210031-75210050 | None:intergenic | 40.0% | |
| GAAGTATGCTCTTGATATCC+TGG | + | chr3.4:75211891-75211910 | MS.gene074401:intron | 40.0% | |
| GAGAGACTCATGCCTATATA+TGG | + | chr3.4:75212773-75212792 | MS.gene074401:intron | 40.0% | |
| GAGATAAGGGGAACTACTAT+GGG | + | chr3.4:75212952-75212971 | MS.gene074401:intron | 40.0% | |
| GAGGACAAGGTGAATCTTTA+GGG | + | chr3.4:75213130-75213149 | MS.gene074401:intron | 40.0% | |
| GATAGCTATTTAGAGGAGAG+TGG | + | chr3.4:75210608-75210627 | MS.gene074401:intron | 40.0% | |
| GATAGGAGAAGAGAAAGGTT+TGG | + | chr3.4:75211561-75211580 | MS.gene074401:intron | 40.0% | |
| GATATCATAAGTGTCCACCT+GGG | - | chr3.4:75213101-75213120 | None:intergenic | 40.0% | |
| GATTACAGGTGATGACAATG+AGG | + | chr3.4:75211747-75211766 | MS.gene074401:intron | 40.0% | |
| GCATGTCATGATTGTGGAAA+TGG | + | chr3.4:75212867-75212886 | MS.gene074401:intron | 40.0% | |
| GTACAGAATGTGAGGTGAAT+AGG | - | chr3.4:75212802-75212821 | None:intergenic | 40.0% | |
| GTGGACAGGTTATAAATGAC+AGG | + | chr3.4:75210627-75210646 | MS.gene074401:intron | 40.0% | |
| GTGTGCATCTTATCTAAACC+AGG | - | chr3.4:75213483-75213502 | None:intergenic | 40.0% | |
| GTTGACGACATTGTGATTAC+AGG | + | chr3.4:75211733-75211752 | MS.gene074401:intron | 40.0% | |
| TAAGACGCAAGAATGCACAA+TGG | - | chr3.4:75210724-75210743 | None:intergenic | 40.0% | |
| TATCATTCACCTTGAGGACA+AGG | + | chr3.4:75213117-75213136 | MS.gene074401:intron | 40.0% | |
| TATGCCAACTAACCTGTTGA+TGG | - | chr3.4:75211375-75211394 | None:intergenic | 40.0% | |
| TCCTCTTCTTCATCAGACAT+AGG | - | chr3.4:75211451-75211470 | None:intergenic | 40.0% | |
| TCGCAAGAAGCAATAGAACA+TGG | - | chr3.4:75209987-75210006 | None:intergenic | 40.0% | |
| TGAACTAAGACATCGTGCAA+GGG | + | chr3.4:75213983-75214002 | MS.gene074401:CDS | 40.0% | |
| TGAACTGAAATCTGCTATGG+AGG | + | chr3.4:75209104-75209123 | MS.gene074401:CDS | 40.0% | |
| TGAGGACAAGGTGAATCTTT+AGG | + | chr3.4:75213129-75213148 | MS.gene074401:intron | 40.0% | |
| TGATATCATAAGTGTCCACC+TGG | - | chr3.4:75213102-75213121 | None:intergenic | 40.0% | |
| TGCAACCATCAAAGCATGAT+AGG | - | chr3.4:75210424-75210443 | None:intergenic | 40.0% | |
| TGGTACCGTTATGGTAGAAA+TGG | + | chr3.4:75211189-75211208 | MS.gene074401:intron | 40.0% | |
| TGTCACAACCATTATGGTGA+CGG | + | chr3.4:75213828-75213847 | MS.gene074401:intron | 40.0% | |
| TGTTGTTGCTCGTTCAAGTA+CGG | + | chr3.4:75212323-75212342 | MS.gene074401:intron | 40.0% | |
| TTCGAATCACTGCATTCCAA+TGG | - | chr3.4:75212122-75212141 | None:intergenic | 40.0% | |
| TTCTTGCGATTATTGTCTCC+AGG | + | chr3.4:75209998-75210017 | MS.gene074401:CDS | 40.0% | |
| TTGGTCCTTGGAATTGACAA+AGG | - | chr3.4:75212574-75212593 | None:intergenic | 40.0% | |
| TTTCTACCATAACGGTACCA+CGG | - | chr3.4:75211189-75211208 | None:intergenic | 40.0% | |
| TTTGTCCTCTCATGAAAGAC+TGG | - | chr3.4:75212489-75212508 | None:intergenic | 40.0% | |
| ! | AACTGACTTACTACACTGAC+TGG | - | chr3.4:75212078-75212097 | None:intergenic | 40.0% |
| ! | AGGGAAGAATGGATGGTTTT+GGG | + | chr3.4:75210833-75210852 | MS.gene074401:intron | 40.0% |
| ! | ATAGTATTCTGGGGGAAAAC+TGG | + | chr3.4:75213692-75213711 | MS.gene074401:CDS | 40.0% |
| ! | ATGGAGTTTCGAGTGTTTGA+TGG | + | chr3.4:75211208-75211227 | MS.gene074401:intron | 40.0% |
| ! | CAAACCAGTTGATACTCCTA+TGG | + | chr3.4:75211936-75211955 | MS.gene074401:intron | 40.0% |
| ! | CCTAAACTTTTGTACCAACC+AGG | + | chr3.4:75209734-75209753 | MS.gene074401:intron | 40.0% |
| ! | CCTGGTTGGTACAAAAGTTT+AGG | - | chr3.4:75209737-75209756 | None:intergenic | 40.0% |
| ! | GTATTAATCAGGGGCTTGTT+TGG | - | chr3.4:75209660-75209679 | None:intergenic | 40.0% |
| ! | GTGGTTGAAGCATTTACTTC+AGG | + | chr3.4:75212389-75212408 | MS.gene074401:intron | 40.0% |
| ! | TAGGGAAGAATGGATGGTTT+TGG | + | chr3.4:75210832-75210851 | MS.gene074401:intron | 40.0% |
| ! | TCAGTTGGTTTCTATCAGAG+TGG | + | chr3.4:75213446-75213465 | MS.gene074401:intron | 40.0% |
| !! | AGCAAAGTACTGCAGCAATT+TGG | + | chr3.4:75211631-75211650 | MS.gene074401:intron | 40.0% |
| !! | CTGAAAGTTGGTATTCTTCC+TGG | - | chr3.4:75210019-75210038 | None:intergenic | 40.0% |
| !! | GCAAAGTACTGCAGCAATTT+GGG | + | chr3.4:75211632-75211651 | MS.gene074401:intron | 40.0% |
| !! | GCGTTTTAAACCGGAATATC+GGG | + | chr3.4:75211417-75211436 | MS.gene074401:intron | 40.0% |
| !! | GGCGTTTTAAACCGGAATAT+CGG | + | chr3.4:75211416-75211435 | MS.gene074401:intron | 40.0% |
| !! | TGGTATCAGAGCATTGATCT+TGG | + | chr3.4:75211161-75211180 | MS.gene074401:intron | 40.0% |
| !!! | GAATGGATGGTTTTGGGTTT+TGG | + | chr3.4:75210839-75210858 | MS.gene074401:intron | 40.0% |
| AAAGCGAGATACACCAGATG+AGG | + | chr3.4:75211279-75211298 | MS.gene074401:intron | 45.0% | |
| ACCTTTCTCTTCTCCTATCG+CGG | - | chr3.4:75211560-75211579 | None:intergenic | 45.0% | |
| ACTCTCCTTGTGACAACCAT+TGG | + | chr3.4:75212103-75212122 | MS.gene074401:intron | 45.0% | |
| AGAATGGGGTCAGAGATAAG+GGG | + | chr3.4:75212940-75212959 | MS.gene074401:intron | 45.0% | |
| AGAGTGGAACTTTGGATACC+TGG | + | chr3.4:75213462-75213481 | MS.gene074401:intron | 45.0% | |
| AGCGGCGATAACGTGATATT+TGG | + | chr3.4:75210242-75210261 | MS.gene074401:intron | 45.0% | |
| ATCTGAGGATTTGACTGGGA+AGG | + | chr3.4:75211027-75211046 | MS.gene074401:intron | 45.0% | |
| ATGCCACATGTGAGCTATTG+TGG | + | chr3.4:75212370-75212389 | MS.gene074401:intron | 45.0% | |
| CAACCACAAGATAGTGACCA+GGG | + | chr3.4:75211520-75211539 | MS.gene074401:intron | 45.0% | |
| CAACCACAATAGCTCACATG+TGG | - | chr3.4:75212376-75212395 | None:intergenic | 45.0% | |
| CAGGAGATACTAGCGATAGA+CGG | + | chr3.4:75212235-75212254 | MS.gene074401:intron | 45.0% | |
| CCAATCCAGTCTTTCATGAG+AGG | + | chr3.4:75212481-75212500 | MS.gene074401:intron | 45.0% | |
| CCTCTCATGAAAGACTGGAT+TGG | - | chr3.4:75212484-75212503 | None:intergenic | 45.0% | |
| CTATTTAGAGGAGAGTGGAC+AGG | + | chr3.4:75210613-75210632 | MS.gene074401:intron | 45.0% | |
| CTCGTAGTAAGCAGGAATAG+TGG | + | chr3.4:75214009-75214028 | MS.gene074401:CDS | 45.0% | |
| CTGAACTAAGACATCGTGCA+AGG | + | chr3.4:75213982-75214001 | MS.gene074401:CDS | 45.0% | |
| CTTTATCCCACTAAGTGGGT+CGG | - | chr3.4:75210333-75210352 | None:intergenic | 45.0% | |
| GAAATTGGAGGGAGAAGAGT+AGG | - | chr3.4:75209246-75209265 | None:intergenic | 45.0% | |
| GAAGTAGCCCAGTCAAAGTT+AGG | + | chr3.4:75211850-75211869 | MS.gene074401:intron | 45.0% | |
| GAGAATGGGGTCAGAGATAA+GGG | + | chr3.4:75212939-75212958 | MS.gene074401:intron | 45.0% | |
| GATGTATATGCACCACCTTG+AGG | + | chr3.4:75212666-75212685 | MS.gene074401:intron | 45.0% | |
| GCAAAGAAGATGCATACTGG+TGG | + | chr3.4:75211230-75211249 | MS.gene074401:intron | 45.0% | |
| GCATTCCAATGGTTGTCACA+AGG | - | chr3.4:75212111-75212130 | None:intergenic | 45.0% | |
| GCCTATGTCTGATGAAGAAG+AGG | + | chr3.4:75211447-75211466 | MS.gene074401:intron | 45.0% | |
| GGACAAGGTGAATCTTTAGG+GGG | + | chr3.4:75213132-75213151 | MS.gene074401:intron | 45.0% | |
| GGCATGATATCCCGATATTC+CGG | - | chr3.4:75211430-75211449 | None:intergenic | 45.0% | |
| GTATGCTCTTGATATCCTGG+AGG | + | chr3.4:75211894-75211913 | MS.gene074401:intron | 45.0% | |
| GTCCAAAAAGATACACACCG+CGG | - | chr3.4:75209687-75209706 | None:intergenic | 45.0% | |
| GTCCTTGGAATTGACAAAGG+AGG | - | chr3.4:75212571-75212590 | None:intergenic | 45.0% | |
| GTTAACAATCCCAGTAGCCA+AGG | - | chr3.4:75209961-75209980 | None:intergenic | 45.0% | |
| TATCTCCATGACCTGATCAG+TGG | - | chr3.4:75210569-75210588 | None:intergenic | 45.0% | |
| TCAACCACAAGATAGTGACC+AGG | + | chr3.4:75211519-75211538 | MS.gene074401:intron | 45.0% | |
| TCTGAGGATTTGACTGGGAA+GGG | + | chr3.4:75211028-75211047 | MS.gene074401:intron | 45.0% | |
| TCTGTCAGTTTCTCCTCATC+TGG | - | chr3.4:75211295-75211314 | None:intergenic | 45.0% | |
| TGAAAACAAGCCCCTTTCCA+GGG | - | chr3.4:75212167-75212186 | None:intergenic | 45.0% | |
| TGAGAATGGGGTCAGAGATA+AGG | + | chr3.4:75212938-75212957 | MS.gene074401:intron | 45.0% | |
| TGTATATGCACCACCTTGAG+GGG | + | chr3.4:75212668-75212687 | MS.gene074401:intron | 45.0% | |
| TTTCAGGAACCTTGGCTACT+GGG | + | chr3.4:75209949-75209968 | MS.gene074401:intron | 45.0% | |
| TTTCCCTGGTCACTATCTTG+TGG | - | chr3.4:75211526-75211545 | None:intergenic | 45.0% | |
| ! | ACAAGGTGAATCTTTAGGGG+GGG | + | chr3.4:75213134-75213153 | MS.gene074401:intron | 45.0% |
| ! | ATCCGCGGTGTGTATCTTTT+TGG | + | chr3.4:75209682-75209701 | MS.gene074401:intron | 45.0% |
| ! | ATGAGAGGTGTAAAGCTGAC+TGG | - | chr3.4:75212461-75212480 | None:intergenic | 45.0% |
| ! | ATTTGGGATGATCCGTTGTG+AGG | + | chr3.4:75211648-75211667 | MS.gene074401:intron | 45.0% |
| ! | GAAAGACTGGATTGGATGAG+AGG | - | chr3.4:75212476-75212495 | None:intergenic | 45.0% |
| ! | GACAAGGTGAATCTTTAGGG+GGG | + | chr3.4:75213133-75213152 | MS.gene074401:intron | 45.0% |
| ! | GATGCGTTGATGTTACTCAG+AGG | + | chr3.4:75211313-75211332 | MS.gene074401:intron | 45.0% |
| ! | GGTCCTCTTCGTTACTTTCT+TGG | + | chr3.4:75211823-75211842 | MS.gene074401:intron | 45.0% |
| ! | TATTCAGATGCTGATTGGGC+AGG | + | chr3.4:75212216-75212235 | MS.gene074401:intron | 45.0% |
| !! | AAGGGGCCATTTTGGCATTA+GGG | + | chr3.4:75211046-75211065 | MS.gene074401:intron | 45.0% |
| !! | AAGGGGCCATTTTGGCATTT+TGG | + | chr3.4:75213342-75213361 | MS.gene074401:intron | 45.0% |
| !! | GATATCAGCAAGTTGGTCCT+TGG | - | chr3.4:75212586-75212605 | None:intergenic | 45.0% |
| !! | GGAAATTGTTTTGCAGTGGC+TGG | + | chr3.4:75213646-75213665 | MS.gene074401:intron | 45.0% |
| !! | GGGCTTGTTTTCACTGATAG+AGG | + | chr3.4:75212174-75212193 | MS.gene074401:intron | 45.0% |
| !! | TTGGCATTTTGGCATTAGGG+AGG | + | chr3.4:75213353-75213372 | MS.gene074401:intron | 45.0% |
| AAGGTTTGCGGCGAAATTGG+AGG | - | chr3.4:75209258-75209277 | None:intergenic | 50.0% | |
| AAGTACCTCAAAGGATCCCC+TGG | + | chr3.4:75212147-75212166 | MS.gene074401:intron | 50.0% | |
| AATCCAAATCCCACCGCGAT+AGG | + | chr3.4:75211544-75211563 | MS.gene074401:intron | 50.0% | |
| ACAAGTCTCCGATATCTGCC+TGG | - | chr3.4:75212009-75212028 | None:intergenic | 50.0% | |
| ACCGCGATAGGAGAAGAGAA+AGG | + | chr3.4:75211556-75211575 | MS.gene074401:intron | 50.0% | |
| AGCGATAGACGGTCTACATC+AGG | + | chr3.4:75212246-75212265 | MS.gene074401:intron | 50.0% | |
| AGGTTTGCGGCGAAATTGGA+GGG | - | chr3.4:75209257-75209276 | None:intergenic | 50.0% | |
| ATACCGACCCAGGCAGATAT+CGG | + | chr3.4:75211998-75212017 | MS.gene074401:intron | 50.0% | |
| ATGTAGCCGACCCACTTAGT+GGG | + | chr3.4:75210324-75210343 | MS.gene074401:intron | 50.0% | |
| CAAGTCTCCGATATCTGCCT+GGG | - | chr3.4:75212008-75212027 | None:intergenic | 50.0% | |
| CAGAGTGATCTGCCTCACAA+CGG | - | chr3.4:75211663-75211682 | None:intergenic | 50.0% | |
| CTCAAAGGATCCCCTGGAAA+GGG | + | chr3.4:75212153-75212172 | MS.gene074401:intron | 50.0% | |
| CTGAGGATTTGACTGGGAAG+GGG | + | chr3.4:75211029-75211048 | MS.gene074401:intron | 50.0% | |
| CTTAGCCACTGATCAGGTCA+TGG | + | chr3.4:75210561-75210580 | MS.gene074401:intron | 50.0% | |
| CTTGATATCCTGGAGGAGAC+AGG | + | chr3.4:75211901-75211920 | MS.gene074401:intron | 50.0% | |
| GAAAACAAGCCCCTTTCCAG+GGG | - | chr3.4:75212166-75212185 | None:intergenic | 50.0% | |
| GACGCCATCAACAGGTTAGT+TGG | + | chr3.4:75211368-75211387 | MS.gene074401:intron | 50.0% | |
| GAGAAGGTTTGCGGCGAAAT+TGG | - | chr3.4:75209261-75209280 | None:intergenic | 50.0% | |
| GAGGACCTAAGTCCTTTGTC+TGG | - | chr3.4:75211810-75211829 | None:intergenic | 50.0% | |
| GATTCCACCAGTGTGACCAT+TGG | - | chr3.4:75211348-75211367 | None:intergenic | 50.0% | |
| GCACCTCCCTAATGCCAAAA+TGG | - | chr3.4:75211055-75211074 | None:intergenic | 50.0% | |
| GCCCCTATTTGACAACTCAG+TGG | - | chr3.4:75209763-75209782 | None:intergenic | 50.0% | |
| GGAGAGAAGGGAAGATTGAG+GGG | + | chr3.4:75211003-75211022 | MS.gene074401:intron | 50.0% | |
| GGCAGATATCGGAGACTTGT+TGG | + | chr3.4:75212009-75212028 | MS.gene074401:intron | 50.0% | |
| GGGAGAGAAGGGAAGATTGA+GGG | + | chr3.4:75211002-75211021 | MS.gene074401:intron | 50.0% | |
| GGGCATCTGAGGATTTGACT+GGG | + | chr3.4:75211023-75211042 | MS.gene074401:intron | 50.0% | |
| GTATAAGGCTCCCCCTGATT+AGG | - | chr3.4:75211982-75212001 | None:intergenic | 50.0% | |
| GTATATGCACCACCTTGAGG+GGG | + | chr3.4:75212669-75212688 | MS.gene074401:intron | 50.0% | |
| GTGAAAACAAGCCCCTTTCC+AGG | - | chr3.4:75212168-75212187 | None:intergenic | 50.0% | |
| GTTTCAGGAACCTTGGCTAC+TGG | + | chr3.4:75209948-75209967 | MS.gene074401:intron | 50.0% | |
| TATCTCAACACTCCCCCTCA+AGG | - | chr3.4:75212684-75212703 | None:intergenic | 50.0% | |
| TATCTGCCTGGGTCGGTATA+AGG | - | chr3.4:75211997-75212016 | None:intergenic | 50.0% | |
| TCAAAGGATCCCCTGGAAAG+GGG | + | chr3.4:75212154-75212173 | MS.gene074401:intron | 50.0% | |
| TGTTGCTCGTTCAAGTACGG+AGG | + | chr3.4:75212326-75212345 | MS.gene074401:intron | 50.0% | |
| TTCTCTTCTCCTATCGCGGT+GGG | - | chr3.4:75211556-75211575 | None:intergenic | 50.0% | |
| TTGACAACTCAGTGGTTGCC+TGG | - | chr3.4:75209755-75209774 | None:intergenic | 50.0% | |
| TTGGAACCGTGGTACCGTTA+TGG | + | chr3.4:75211180-75211199 | MS.gene074401:intron | 50.0% | |
| TTGGAGCAGTTGACGACTCA+AGG | + | chr3.4:75211484-75211503 | MS.gene074401:intron | 50.0% | |
| TTTCTCTTCTCCTATCGCGG+TGG | - | chr3.4:75211557-75211576 | None:intergenic | 50.0% | |
| !! | GAAGGGGCCATTTTGGCATT+AGG | + | chr3.4:75211045-75211064 | MS.gene074401:intron | 50.0% |
| !! | GAGCATTGATCTTGGAACCG+TGG | + | chr3.4:75211169-75211188 | MS.gene074401:intron | 50.0% |
| !! | GGGTCCATAGGAGTATCAAC+TGG | - | chr3.4:75211943-75211962 | None:intergenic | 50.0% |
| AAGGGCTGCTCGTAGTAAGC+AGG | + | chr3.4:75214001-75214020 | MS.gene074401:CDS | 55.0% | |
| CAACTCAGTGGTTGCCTGGT+TGG | - | chr3.4:75209751-75209770 | None:intergenic | 55.0% | |
| CACTAAGTGGGTCGGCTACA+TGG | - | chr3.4:75210325-75210344 | None:intergenic | 55.0% | |
| CATGTAGCCGACCCACTTAG+TGG | + | chr3.4:75210323-75210342 | MS.gene074401:intron | 55.0% | |
| CCTCAAAGGATCCCCTGGAA+AGG | + | chr3.4:75212152-75212171 | MS.gene074401:intron | 55.0% | |
| CCTTTCCAGGGGATCCTTTG+AGG | - | chr3.4:75212155-75212174 | None:intergenic | 55.0% | |
| CGGTGGGATTTGGATTTCCC+TGG | - | chr3.4:75211540-75211559 | None:intergenic | 55.0% | |
| CTCACATGTGGCATGAGCCA+TGG | - | chr3.4:75212364-75212383 | None:intergenic | 55.0% | |
| CTCACCAATGGTCACACTGG+TGG | + | chr3.4:75211341-75211360 | MS.gene074401:intron | 55.0% | |
| CTGGTGGCTGCTATGCATTG+AGG | + | chr3.4:75211246-75211265 | MS.gene074401:intron | 55.0% | |
| CTGTAAGACCTGTCTCCTCC+AGG | - | chr3.4:75211912-75211931 | None:intergenic | 55.0% | |
| GGGGAGAGAAGGGAAGATTG+AGG | + | chr3.4:75211001-75211020 | MS.gene074401:intron | 55.0% | |
| GTGCTCACCAATGGTCACAC+TGG | + | chr3.4:75211338-75211357 | MS.gene074401:intron | 55.0% | |
| GTGGAATCGACGCCATCAAC+AGG | + | chr3.4:75211360-75211379 | MS.gene074401:intron | 55.0% | |
| TCAGAGGTCGTGCTCACCAA+TGG | + | chr3.4:75211329-75211348 | MS.gene074401:intron | 55.0% | |
| TCTCCGATATCTGCCTGGGT+CGG | - | chr3.4:75212004-75212023 | None:intergenic | 55.0% | |
| TCTCCTATCGCGGTGGGATT+TGG | - | chr3.4:75211550-75211569 | None:intergenic | 55.0% | |
| ! | GGGGCATCTGAGGATTTGAC+TGG | + | chr3.4:75211022-75211041 | MS.gene074401:intron | 55.0% |
| ! | TGACTGGGAAGGGGCCATTT+TGG | + | chr3.4:75211038-75211057 | MS.gene074401:intron | 55.0% |
| !! | GGAAGATTGAGGGGCATCTG+AGG | + | chr3.4:75211012-75211031 | MS.gene074401:intron | 55.0% |
| !! | GGGCCATTTTGGCATTAGGG+AGG | + | chr3.4:75211049-75211068 | MS.gene074401:intron | 55.0% |
| CTCAACACTCCCCCTCAAGG+TGG | - | chr3.4:75212681-75212700 | None:intergenic | 60.0% | |
| !! | GGAGGCTGAGTATCGAGCCA+TGG | + | chr3.4:75212344-75212363 | MS.gene074401:intron | 60.0% |
| ! | GGGGAGCCTTATACCGACCC+AGG | + | chr3.4:75211988-75212007 | MS.gene074401:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 75209093 | 75214028 | 75209093 | ID=MS.gene074401 |
| chr3.4 | mRNA | 75209093 | 75214028 | 75209093 | ID=MS.gene074401.t1;Parent=MS.gene074401 |
| chr3.4 | exon | 75209093 | 75209239 | 75209093 | ID=MS.gene074401.t1.exon1;Parent=MS.gene074401.t1 |
| chr3.4 | CDS | 75209093 | 75209239 | 75209093 | ID=cds.MS.gene074401.t1;Parent=MS.gene074401.t1 |
| chr3.4 | exon | 75209955 | 75210060 | 75209955 | ID=MS.gene074401.t1.exon2;Parent=MS.gene074401.t1 |
| chr3.4 | CDS | 75209955 | 75210060 | 75209955 | ID=cds.MS.gene074401.t1;Parent=MS.gene074401.t1 |
| chr3.4 | exon | 75213662 | 75213810 | 75213662 | ID=MS.gene074401.t1.exon3;Parent=MS.gene074401.t1 |
| chr3.4 | CDS | 75213662 | 75213810 | 75213662 | ID=cds.MS.gene074401.t1;Parent=MS.gene074401.t1 |
| chr3.4 | exon | 75213933 | 75214028 | 75213933 | ID=MS.gene074401.t1.exon4;Parent=MS.gene074401.t1 |
| chr3.4 | CDS | 75213933 | 75214028 | 75213933 | ID=cds.MS.gene074401.t1;Parent=MS.gene074401.t1 |
| Gene Sequence |
| Protein sequence |
