Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074510.t1 | XP_013451330.2 | 99.7 | 389 | 1 | 0 | 1 | 389 | 7 | 395 | 1.80E-227 | 798.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074510.t1 | O82567 | 82.0 | 389 | 70 | 0 | 1 | 389 | 1 | 389 | 7.7e-195 | 681.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074510.t1 | A0A396HGS3 | 99.7 | 389 | 1 | 0 | 1 | 389 | 7 | 395 | 1.3e-227 | 798.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049404 | MS.gene074510 | 0.813768 | 2.17E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene074510 | 0.805613 | 1.23E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene074510 | 0.809039 | 2.30E-50 | -1.69E-46 |
| MS.gene050844 | MS.gene074510 | 0.805517 | 1.28E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene074510 | 0.81494 | 1.19E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene074510 | 0.820602 | 6.29E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene074510 | 0.811356 | 7.30E-51 | -1.69E-46 |
| MS.gene053565 | MS.gene074510 | 0.811515 | 6.74E-51 | -1.69E-46 |
| MS.gene053883 | MS.gene074510 | 0.812568 | 3.97E-51 | -1.69E-46 |
| MS.gene053998 | MS.gene074510 | 0.808535 | 2.95E-50 | -1.69E-46 |
| MS.gene055357 | MS.gene074510 | 0.813411 | 2.59E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene074510 | 0.804298 | 2.31E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene074510 | 0.813394 | 2.62E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene074510 | 0.80884 | 2.54E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene074510 | 0.823571 | 1.29E-53 | -1.69E-46 |
| MS.gene056553 | MS.gene074510 | 0.806996 | 6.27E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene074510 | 0.802482 | 5.49E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene074510 | 0.829545 | 4.85E-55 | -1.69E-46 |
| MS.gene057869 | MS.gene074510 | 0.806609 | 7.57E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene074510 | 0.807914 | 4.01E-50 | -1.69E-46 |
| MS.gene060167 | MS.gene074510 | 0.80243 | 5.63E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene074510 | 0.813071 | 3.08E-51 | -1.69E-46 |
| MS.gene060918 | MS.gene074510 | 0.800744 | 1.25E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80895 | MS.gene074510 | PPI |
| MS.gene074510 | MS.gene80895 | PPI |
| MS.gene074510 | MS.gene074197 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074510.t1 | MTR_6g018970 | 99.707 | 341 | 1 | 0 | 49 | 389 | 1 | 341 | 0.0 | 692 |
| MS.gene074510.t1 | MTR_3g009730 | 86.047 | 387 | 54 | 0 | 3 | 389 | 2 | 388 | 0.0 | 647 |
| MS.gene074510.t1 | MTR_3g009730 | 85.714 | 343 | 49 | 0 | 47 | 389 | 11 | 353 | 0.0 | 568 |
| MS.gene074510.t1 | MTR_3g009730 | 85.337 | 341 | 50 | 0 | 49 | 389 | 35 | 375 | 0.0 | 559 |
| MS.gene074510.t1 | MTR_6g018970 | 99.606 | 254 | 1 | 0 | 136 | 389 | 1 | 254 | 0.0 | 514 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074510.t1 | AT1G13560 | 82.005 | 389 | 70 | 0 | 1 | 389 | 1 | 389 | 0.0 | 680 |
| MS.gene074510.t1 | AT3G25585 | 79.177 | 389 | 81 | 0 | 1 | 389 | 1 | 389 | 0.0 | 646 |
| MS.gene074510.t1 | AT3G25585 | 79.177 | 389 | 81 | 0 | 1 | 389 | 1 | 389 | 0.0 | 646 |
| MS.gene074510.t1 | AT3G25585 | 79.177 | 389 | 81 | 0 | 1 | 389 | 1 | 389 | 0.0 | 646 |
| MS.gene074510.t1 | AT1G13560 | 80.645 | 341 | 66 | 0 | 49 | 389 | 1 | 341 | 0.0 | 585 |
| MS.gene074510.t1 | AT1G13560 | 80.117 | 342 | 68 | 0 | 48 | 389 | 5 | 346 | 0.0 | 583 |
| MS.gene074510.t1 | AT3G25585 | 78.592 | 341 | 73 | 0 | 49 | 389 | 1 | 341 | 0.0 | 558 |
| MS.gene074510.t1 | AT3G25585 | 78.592 | 341 | 73 | 0 | 49 | 389 | 1 | 341 | 0.0 | 558 |
| MS.gene074510.t1 | AT3G25585 | 78.338 | 337 | 73 | 0 | 53 | 389 | 1 | 337 | 0.0 | 551 |
Find 83 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTTGAAGCACTTGCTTT+TGG | 0.146979 | 6.1:+4922667 | MS.gene074510:intron |
| CTTGGTTACTGTGCATTTAC+AGG | 0.204431 | 6.1:+4925600 | MS.gene074510:CDS |
| CTGATACTTCCTGTTGTAAA+TGG | 0.239203 | 6.1:+4922964 | MS.gene074510:CDS |
| GACAACTAAATGTGGATAAT+TGG | 0.245221 | 6.1:-4924349 | None:intergenic |
| CAGTGTTATCAATGTTTATA+AGG | 0.272486 | 6.1:+4924057 | MS.gene074510:intron |
| AATGAGAGACTAGTTCTTCT+TGG | 0.279735 | 6.1:+4925582 | MS.gene074510:CDS |
| CATTTAGTTGTCATGGGAAC+TGG | 0.293650 | 6.1:+4924360 | MS.gene074510:CDS |
| AAGCAAAGGTTTACCATGTT+TGG | 0.294075 | 6.1:-4921483 | None:intergenic |
| AATATGTACTACAGCCCTTC+TGG | 0.298427 | 6.1:+4920794 | MS.gene074510:CDS |
| ATAGAGAGAATGGGTTATAT+TGG | 0.305875 | 6.1:+4920706 | None:intergenic |
| CGAATTCTTCAAGTCCATTA+GGG | 0.318784 | 6.1:+4922432 | MS.gene074510:CDS |
| GAATGGTGGGCTCAGCAATT+TGG | 0.323501 | 6.1:+4923328 | MS.gene074510:CDS |
| ACGAATTCTTCAAGTCCATT+AGG | 0.326269 | 6.1:+4922431 | MS.gene074510:CDS |
| CCCTGGGAATATATTGCTTC+AGG | 0.345121 | 6.1:+4925993 | MS.gene074510:CDS |
| TATCCGTTTGTTGTCCTTGT+CGG | 0.376290 | 6.1:+4924200 | MS.gene074510:CDS |
| ATGGGAACTGGGCTTACTTT+CGG | 0.380940 | 6.1:+4924372 | MS.gene074510:CDS |
| AGAGTCTTACCAGAAATAAA+AGG | 0.386724 | 6.1:-4923379 | None:intergenic |
| TTGTGTTTGATGATAGCTTT+TGG | 0.409890 | 6.1:+4923771 | MS.gene074510:CDS |
| CCAGATATACTCACCTCAAT+TGG | 0.413495 | 6.1:+4921895 | MS.gene074510:intron |
| TGATCGAACAGCTCCCCTAA+TGG | 0.416067 | 6.1:-4922446 | None:intergenic |
| CTACTATTGTCTGCATTGCT+TGG | 0.420160 | 6.1:+4921624 | MS.gene074510:CDS |
| TGTTCCATTGCAGGATAACT+AGG | 0.421949 | 6.1:+4926597 | MS.gene074510:intron |
| TGTGTGGAAGAAGTACTTTC+TGG | 0.423309 | 6.1:+4922701 | MS.gene074510:CDS |
| AAGGTTGTGAAGTCGAGAAA+TGG | 0.434652 | 6.1:+4924076 | MS.gene074510:CDS |
| TTCTACAGGTGCTGAATGGT+GGG | 0.460804 | 6.1:+4923315 | MS.gene074510:intron |
| TTTCTACAGGTGCTGAATGG+TGG | 0.462100 | 6.1:+4923314 | MS.gene074510:intron |
| ACAATATAGCACTGTATGTC+GGG | 0.464539 | 6.1:-4923752 | None:intergenic |
| TAGACATTTGATGCTGTTGA+TGG | 0.466711 | 6.1:+4922392 | MS.gene074510:intron |
| TTATCCACATTTAGTTGTCA+TGG | 0.467060 | 6.1:+4924353 | MS.gene074510:CDS |
| TCCGTAGGTCCATTTACAAC+AGG | 0.488560 | 6.1:-4922973 | None:intergenic |
| CTGCATAGATACAAATATAG+TGG | 0.490935 | 6.1:+4920748 | MS.gene074510:CDS |
| ACCTGAAGCAATATATTCCC+AGG | 0.495698 | 6.1:-4925994 | None:intergenic |
| TGTGCAAAATGAACCCATCT+TGG | 0.496233 | 6.1:-4921929 | None:intergenic |
| ATGGGTTATATTGGTTCTCA+TGG | 0.500174 | 6.1:+4920715 | MS.gene074510:CDS |
| AACAGGAAGTATCAGTGTAT+TGG | 0.501512 | 6.1:-4922956 | None:intergenic |
| TTTGTTCCAGATAACTCTGA+TGG | 0.504877 | 6.1:+4921590 | MS.gene074510:intron |
| TTAGGGGAGCTGTTCGATCA+TGG | 0.507201 | 6.1:+4922449 | MS.gene074510:CDS |
| TATCCACATTTAGTTGTCAT+GGG | 0.514355 | 6.1:+4924354 | MS.gene074510:CDS |
| ACTAGTCTCTCATTAACTAA+AGG | 0.516957 | 6.1:-4925573 | None:intergenic |
| ATTTAGTTGTCATGGGAACT+GGG | 0.520723 | 6.1:+4924361 | MS.gene074510:CDS |
| TCATGAAATTACGAATGCCC+TGG | 0.523889 | 6.1:+4925976 | MS.gene074510:CDS |
| GCTTACTTTCGGATATCTTG+TGG | 0.528578 | 6.1:+4924383 | MS.gene074510:CDS |
| GTGAACAAAGCGAGTCCAGA+AGG | 0.529233 | 6.1:-4920809 | None:intergenic |
| TCCTGTTGTAAATGGACCTA+CGG | 0.530088 | 6.1:+4922972 | MS.gene074510:CDS |
| TGGACACAGCTCCTCCAAGA+TGG | 0.531879 | 6.1:+4921915 | MS.gene074510:CDS |
| CACAATATAGCACTGTATGT+CGG | 0.544277 | 6.1:-4923753 | None:intergenic |
| CCTCCGACAAGGACAACAAA+CGG | 0.544347 | 6.1:-4924203 | None:intergenic |
| TTGTCGGAGGAGTGCTTATG+TGG | 0.545286 | 6.1:+4924216 | MS.gene074510:CDS |
| CCGTTTGTTGTCCTTGTCGG+AGG | 0.551272 | 6.1:+4924203 | MS.gene074510:CDS |
| CACTTATGTGATGAACCAAA+AGG | 0.551574 | 6.1:+4925035 | MS.gene074510:CDS |
| CTTGCATCAAGGCTAAATGA+TGG | 0.552012 | 6.1:+4925445 | MS.gene074510:CDS |
| TTGCTAATGCACTTGCATCA+AGG | 0.554145 | 6.1:+4925434 | MS.gene074510:CDS |
| AGTACTCACGGCATCCATAG+AGG | 0.559563 | 6.1:-4920838 | None:intergenic |
| CATGAAATTACGAATGCCCT+GGG | 0.561598 | 6.1:+4925977 | MS.gene074510:CDS |
| TTGTTCCAGATAACTCTGAT+GGG | 0.566961 | 6.1:+4921591 | MS.gene074510:intron |
| GGACACAGCTCCTCCAAGAT+GGG | 0.571189 | 6.1:+4921916 | MS.gene074510:CDS |
| GGAGGAGCTGTGTCCAATTG+AGG | 0.580594 | 6.1:-4921908 | None:intergenic |
| TTGCATCAAGGCTAAATGAT+GGG | 0.587433 | 6.1:+4925446 | MS.gene074510:CDS |
| GCAAAATGAACCCATCTTGG+AGG | 0.587784 | 6.1:-4921926 | None:intergenic |
| CTTACCATTGCTAACGCAAG+AGG | 0.592076 | 6.1:-4924106 | None:intergenic |
| AGACATTTGATGCTGTTGAT+GGG | 0.598242 | 6.1:+4922393 | MS.gene074510:intron |
| GAAGAAGTACTTTCTGGTGG+TGG | 0.603104 | 6.1:+4922707 | MS.gene074510:CDS |
| TGATGCAAGTGCATTAGCAA+TGG | 0.604002 | 6.1:-4925431 | None:intergenic |
| CCATTGCAGGATAACTAGGA+AGG | 0.604804 | 6.1:+4926601 | MS.gene074510:intron |
| TATGCCTCTTGCGTTAGCAA+TGG | 0.621209 | 6.1:+4924102 | MS.gene074510:CDS |
| TGGCAAGTGGTAGATACATG+AGG | 0.625727 | 6.1:-4925411 | None:intergenic |
| GTTGTAAATGGACCTACGGA+GGG | 0.637088 | 6.1:+4922976 | MS.gene074510:CDS |
| ACATACTTGAGTGCGACGGT+TGG | 0.638301 | 6.1:-4923801 | None:intergenic |
| GAATTCTTCAAGTCCATTAG+GGG | 0.640800 | 6.1:+4922433 | MS.gene074510:CDS |
| TGAACAAAGCGAGTCCAGAA+GGG | 0.641743 | 6.1:-4920808 | None:intergenic |
| CTATACATACTTGAGTGCGA+CGG | 0.648516 | 6.1:-4923805 | None:intergenic |
| GGCAAGTGGTAGATACATGA+GGG | 0.648543 | 6.1:-4925410 | None:intergenic |
| TTTGGGAGCACATCCATGTG+TGG | 0.648878 | 6.1:+4922685 | MS.gene074510:CDS |
| GTTCCCATGACAACTAAATG+TGG | 0.649879 | 6.1:-4924357 | None:intergenic |
| CCTGAAGCAATATATTCCCA+GGG | 0.650536 | 6.1:-4925993 | None:intergenic |
| ACATAAGCACTCCTCCGACA+AGG | 0.651566 | 6.1:-4924214 | None:intergenic |
| GAAAGTACTTCTTCCACACA+TGG | 0.654787 | 6.1:-4922698 | None:intergenic |
| AGTGCATTAGCAATGGCAAG+TGG | 0.672892 | 6.1:-4925424 | None:intergenic |
| TGTTGTAAATGGACCTACGG+AGG | 0.673487 | 6.1:+4922975 | MS.gene074510:CDS |
| TAATTGGCTATGATGTCAGA+TGG | 0.673929 | 6.1:-4924333 | None:intergenic |
| ATTATCATAAGACCCTCCGT+AGG | 0.691029 | 6.1:-4922988 | None:intergenic |
| GTGGAAGAAGTACTTTCTGG+TGG | 0.727462 | 6.1:+4922704 | MS.gene074510:CDS |
| TGGTGTAGATCATTCCTACG+TGG | 0.791149 | 6.1:+4920768 | MS.gene074510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATAACTTATGTAAA+TGG | + | chr6.1:4923171-4923190 | MS.gene074510:intron | 10.0% |
| !! | AATATTTCTTACAAAATAAA+TGG | - | chr6.1:4923550-4923569 | None:intergenic | 10.0% |
| !! | TTAACATTATTATTATCTAT+TGG | + | chr6.1:4924027-4924046 | MS.gene074510:intron | 10.0% |
| !! | TTGAAAATTTATTAATATCA+GGG | + | chr6.1:4925815-4925834 | MS.gene074510:intron | 10.0% |
| !! | AAATTAATCAGCAATATTAA+AGG | - | chr6.1:4921803-4921822 | None:intergenic | 15.0% |
| !! | AATATAGGAACTAAATAAAA+AGG | - | chr6.1:4922093-4922112 | None:intergenic | 15.0% |
| !! | AATTAAATAACATCAATCAA+CGG | - | chr6.1:4925500-4925519 | None:intergenic | 15.0% |
| !! | AGTAAAAATATGTTTATAAG+TGG | + | chr6.1:4920973-4920992 | MS.gene074510:intron | 15.0% |
| !! | CTTGAAAATTTATTAATATC+AGG | + | chr6.1:4925814-4925833 | MS.gene074510:intron | 15.0% |
| !! | GTAAAAATATGTTTATAAGT+GGG | + | chr6.1:4920974-4920993 | MS.gene074510:intron | 15.0% |
| !! | TAATAACAGAATGAAAAATA+CGG | - | chr6.1:4922488-4922507 | None:intergenic | 15.0% |
| !! | TAATATCTCTTTAATGAATT+TGG | - | chr6.1:4925332-4925351 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTAAAGATTCTTA+TGG | + | chr6.1:4922309-4922328 | MS.gene074510:intron | 15.0% |
| !!! | GAAATTGTTTGATATATTTT+TGG | + | chr6.1:4925543-4925562 | MS.gene074510:intron | 15.0% |
| !!! | TTAGTATACTTCTAAAATTA+TGG | + | chr6.1:4924915-4924934 | MS.gene074510:intron | 15.0% |
| !!! | TTTTCATTTCAAACTAATAT+TGG | + | chr6.1:4920862-4920881 | MS.gene074510:intron | 15.0% |
| !! | AAATTTATTAATATCAGGGA+TGG | + | chr6.1:4925819-4925838 | MS.gene074510:intron | 20.0% |
| !! | AAGTATATATGTATTCATGT+CGG | + | chr6.1:4926323-4926342 | MS.gene074510:intron | 20.0% |
| !! | AATTGTAGGATAATTAAACA+AGG | - | chr6.1:4921359-4921378 | None:intergenic | 20.0% |
| !! | AATTTACTAACGAAATTATG+TGG | - | chr6.1:4924815-4924834 | None:intergenic | 20.0% |
| !! | ATGAGGATATATGAAATAAA+AGG | - | chr6.1:4921428-4921447 | None:intergenic | 20.0% |
| !! | ATTGTAGGATAATTAAACAA+GGG | - | chr6.1:4921358-4921377 | None:intergenic | 20.0% |
| !! | CACGATATTTCTTTAAATAT+AGG | - | chr6.1:4922108-4922127 | None:intergenic | 20.0% |
| !! | CATTACTTGAAAATGATTAT+TGG | + | chr6.1:4923644-4923663 | MS.gene074510:intron | 20.0% |
| !! | GCAAAATAAAAATTAATGTG+AGG | - | chr6.1:4921727-4921746 | None:intergenic | 20.0% |
| !! | TATCTGCATAAATATCTAAA+AGG | - | chr6.1:4923137-4923156 | None:intergenic | 20.0% |
| !! | TTACAGTAACATTTATCTTA+TGG | + | chr6.1:4925521-4925540 | MS.gene074510:intron | 20.0% |
| !!! | AATATTGCTGATTAATTTCA+TGG | + | chr6.1:4921805-4921824 | MS.gene074510:intron | 20.0% |
| !!! | ACAATGAAATCAGAAATTTT+TGG | + | chr6.1:4921757-4921776 | MS.gene074510:intron | 20.0% |
| !!! | ATAAAGAAGTCTTTTGAAAT+TGG | + | chr6.1:4922065-4922084 | MS.gene074510:intron | 20.0% |
| !!! | ATATTTTTGACTATATTGCA+GGG | + | chr6.1:4922547-4922566 | MS.gene074510:intron | 20.0% |
| !!! | ATCAATTACGTTTATTCTTT+TGG | + | chr6.1:4925719-4925738 | MS.gene074510:intron | 20.0% |
| !!! | ATGACATTATTTTCTTTTGA+TGG | - | chr6.1:4922631-4922650 | None:intergenic | 20.0% |
| !!! | ATTGATGATTTTCAATTTCA+TGG | - | chr6.1:4925705-4925724 | None:intergenic | 20.0% |
| !!! | TGATTTTTGAAATTTCTTTC+CGG | + | chr6.1:4923718-4923737 | MS.gene074510:intron | 20.0% |
| !!! | TGTTGTAATTATTTTTCTAC+AGG | + | chr6.1:4923301-4923320 | MS.gene074510:intron | 20.0% |
| !!! | TTTTTGTTGAACTTTGTTTT+TGG | + | chr6.1:4926129-4926148 | MS.gene074510:intron | 20.0% |
| ! | AACCTAAAAGAAATTGTTTC+AGG | - | chr6.1:4923922-4923941 | None:intergenic | 25.0% |
| ! | AATAAGTATACAGAAACACA+AGG | - | chr6.1:4923974-4923993 | None:intergenic | 25.0% |
| ! | ACAACTATATGTGTATCATT+TGG | + | chr6.1:4926438-4926457 | MS.gene074510:intron | 25.0% |
| ! | AGCATGAAATTTACCAAAAT+CGG | - | chr6.1:4922024-4922043 | None:intergenic | 25.0% |
| ! | ATCTATTAGCATAAGCAATT+GGG | - | chr6.1:4924710-4924729 | None:intergenic | 25.0% |
| ! | ATTAGTGTCTAATGTATTGT+TGG | + | chr6.1:4926034-4926053 | MS.gene074510:intron | 25.0% |
| ! | CAACTTGCGAAAATTTAAAA+CGG | + | chr6.1:4925678-4925697 | MS.gene074510:intron | 25.0% |
| ! | CAGATGATACTACAAAATAA+AGG | - | chr6.1:4921509-4921528 | None:intergenic | 25.0% |
| ! | CAGTGTTATCAATGTTTATA+AGG | + | chr6.1:4924057-4924076 | MS.gene074510:intron | 25.0% |
| ! | CGAGATAAAGAATATAAAGA+CGG | - | chr6.1:4923405-4923424 | None:intergenic | 25.0% |
| ! | CGTCTTTATATTCTTTATCT+CGG | + | chr6.1:4923403-4923422 | MS.gene074510:intron | 25.0% |
| ! | CTAAAACACTTCCATAAATA+CGG | + | chr6.1:4922209-4922228 | MS.gene074510:intron | 25.0% |
| ! | CTACATCTATTCTAACAATT+CGG | + | chr6.1:4922838-4922857 | MS.gene074510:intron | 25.0% |
| ! | GATTCTTATGGTTTATCAAT+AGG | + | chr6.1:4922321-4922340 | MS.gene074510:intron | 25.0% |
| ! | TAAAAATTAATGTGAGGAAC+AGG | - | chr6.1:4921721-4921740 | None:intergenic | 25.0% |
| ! | TATCTATTAGCATAAGCAAT+TGG | - | chr6.1:4924711-4924730 | None:intergenic | 25.0% |
| ! | TCAAATACAATGCTATATAC+AGG | - | chr6.1:4922794-4922813 | None:intergenic | 25.0% |
| ! | TGCAATATCAATGATTAAAC+CGG | - | chr6.1:4925635-4925654 | None:intergenic | 25.0% |
| ! | TTACTTCATTAGATACTCAT+AGG | - | chr6.1:4925207-4925226 | None:intergenic | 25.0% |
| ! | TTATAGGAAAGAATTCCAAT+AGG | - | chr6.1:4924139-4924158 | None:intergenic | 25.0% |
| ! | TTGGTTAAATTCTCATATTG+TGG | + | chr6.1:4921978-4921997 | MS.gene074510:intron | 25.0% |
| ! | TTTACGAAGTTATTTGATGA+AGG | + | chr6.1:4923992-4924011 | MS.gene074510:intron | 25.0% |
| ! | TTTCATATATCCTCATTACT+CGG | + | chr6.1:4921432-4921451 | MS.gene074510:intron | 25.0% |
| !! | AACCTGAAACAATTTCTTTT+AGG | + | chr6.1:4923917-4923936 | MS.gene074510:intron | 25.0% |
| !! | ACTTAAATGATTTTGTTGCA+GGG | + | chr6.1:4924299-4924318 | MS.gene074510:intron | 25.0% |
| !! | ATATCTGCAGTTACATTTTA+TGG | + | chr6.1:4922733-4922752 | MS.gene074510:CDS | 25.0% |
| !! | CTATTATGTTTTCGACTTTA+TGG | - | chr6.1:4921688-4921707 | None:intergenic | 25.0% |
| !! | GGTGTCTTTATTAAGAATTT+TGG | + | chr6.1:4926407-4926426 | MS.gene074510:intron | 25.0% |
| !! | TACTTAAATGATTTTGTTGC+AGG | + | chr6.1:4924298-4924317 | MS.gene074510:intron | 25.0% |
| !!! | ATTGTTTCAGGTTTAAAAGT+TGG | - | chr6.1:4923910-4923929 | None:intergenic | 25.0% |
| !!! | GATATTTTTGACTATATTGC+AGG | + | chr6.1:4922546-4922565 | MS.gene074510:intron | 25.0% |
| !!! | TGAAATGAAAAAAGTACTCA+CGG | - | chr6.1:4920853-4920872 | None:intergenic | 25.0% |
| !!! | TGGTATTAAGCTGTTTTATT+TGG | + | chr6.1:4925078-4925097 | MS.gene074510:intron | 25.0% |
| !!! | TGTTTGATATATTTTTGGCA+GGG | + | chr6.1:4925548-4925567 | MS.gene074510:intron | 25.0% |
| !!! | TTATGGATTAGGATGATTAA+TGG | - | chr6.1:4921671-4921690 | None:intergenic | 25.0% |
| !!! | TTGGATAAACAGCTTATTTT+AGG | + | chr6.1:4924487-4924506 | MS.gene074510:intron | 25.0% |
| !!! | TTGTTTGATATATTTTTGGC+AGG | + | chr6.1:4925547-4925566 | MS.gene074510:intron | 25.0% |
| AAAAAACCTTTGACACATCT+TGG | + | chr6.1:4926244-4926263 | MS.gene074510:intron | 30.0% | |
| AAAGAGAAAAAACCACACTT+AGG | - | chr6.1:4926382-4926401 | None:intergenic | 30.0% | |
| AAAGCTTAACACCGTATTTA+TGG | - | chr6.1:4922223-4922242 | None:intergenic | 30.0% | |
| AAAGGCAACCAATTCAAAAA+AGG | - | chr6.1:4923364-4923383 | None:intergenic | 30.0% | |
| AAGAAATTGACGAAGTCTAA+GGG | - | chr6.1:4924760-4924779 | None:intergenic | 30.0% | |
| ACAACAATAACAATACGCAT+TGG | - | chr6.1:4923287-4923306 | None:intergenic | 30.0% | |
| ACAACTTATGACATATCCAT+TGG | - | chr6.1:4924662-4924681 | None:intergenic | 30.0% | |
| ACCATAAAAACTCACAGAAA+GGG | - | chr6.1:4923051-4923070 | None:intergenic | 30.0% | |
| ACGATCATAAGCTATATCAT+TGG | + | chr6.1:4921546-4921565 | MS.gene074510:intron | 30.0% | |
| AGAGTCTTACCAGAAATAAA+AGG | - | chr6.1:4923382-4923401 | None:intergenic | 30.0% | |
| AGGAGTTAGATTGTACATAA+AGG | - | chr6.1:4924958-4924977 | None:intergenic | 30.0% | |
| AGTATACTAAGAAACTACCA+AGG | - | chr6.1:4924905-4924924 | None:intergenic | 30.0% | |
| ATAAGCTGTTTATCCAAACA+AGG | - | chr6.1:4924484-4924503 | None:intergenic | 30.0% | |
| ATATGAGAATTTAACCAACC+TGG | - | chr6.1:4921976-4921995 | None:intergenic | 30.0% | |
| ATATTCTTTATCTCGGACAA+AGG | + | chr6.1:4923410-4923429 | MS.gene074510:intron | 30.0% | |
| CAACAAAGTAACCAGATTAT+AGG | - | chr6.1:4924155-4924174 | None:intergenic | 30.0% | |
| CATTGTTATGTATCTTCATC+TGG | + | chr6.1:4921207-4921226 | MS.gene074510:intron | 30.0% | |
| CGAATTGTTAGAATAGATGT+AGG | - | chr6.1:4922840-4922859 | None:intergenic | 30.0% | |
| CTACAAAATAAAGGAAGCAA+AGG | - | chr6.1:4921500-4921519 | None:intergenic | 30.0% | |
| CTGCATAGATACAAATATAG+TGG | + | chr6.1:4920748-4920767 | MS.gene074510:CDS | 30.0% | |
| CTTGGCGAGAATAAAAAAAT+AGG | - | chr6.1:4922253-4922272 | None:intergenic | 30.0% | |
| GACAACTAAATGTGGATAAT+TGG | - | chr6.1:4924352-4924371 | None:intergenic | 30.0% | |
| GCAATATCAATGATTAAACC+GGG | - | chr6.1:4925634-4925653 | None:intergenic | 30.0% | |
| GGTTTAATCATTGATATTGC+AGG | + | chr6.1:4925634-4925653 | MS.gene074510:intron | 30.0% | |
| GTATACTAAGAAACTACCAA+GGG | - | chr6.1:4924904-4924923 | None:intergenic | 30.0% | |
| TAAGAAATTGACGAAGTCTA+AGG | - | chr6.1:4924761-4924780 | None:intergenic | 30.0% | |
| TACAAAACTCAACAGTTCTA+CGG | - | chr6.1:4924430-4924449 | None:intergenic | 30.0% | |
| TACCATAAAAACTCACAGAA+AGG | - | chr6.1:4923052-4923071 | None:intergenic | 30.0% | |
| TATCCACATTTAGTTGTCAT+GGG | + | chr6.1:4924354-4924373 | MS.gene074510:CDS | 30.0% | |
| TCACTATCTAGAGATCATAT+TGG | + | chr6.1:4922155-4922174 | MS.gene074510:intron | 30.0% | |
| TCACTCATAAACACTTCATT+AGG | - | chr6.1:4921066-4921085 | None:intergenic | 30.0% | |
| TCAGTAAAAGTCATACTGTA+AGG | - | chr6.1:4924978-4924997 | None:intergenic | 30.0% | |
| TGGAATTCTTTCCTATAATC+TGG | + | chr6.1:4924141-4924160 | MS.gene074510:intron | 30.0% | |
| TGTAAATGGTGAGATCTTAT+TGG | + | chr6.1:4923185-4923204 | MS.gene074510:intron | 30.0% | |
| TTATCCACATTTAGTTGTCA+TGG | + | chr6.1:4924353-4924372 | MS.gene074510:CDS | 30.0% | |
| TTGTGTAAACCAGATCATAT+TGG | - | chr6.1:4923603-4923622 | None:intergenic | 30.0% | |
| ! | AAGTTTTCGATACATGTTTG+TGG | + | chr6.1:4921850-4921869 | MS.gene074510:intron | 30.0% |
| ! | ACTAGTCTCTCATTAACTAA+AGG | - | chr6.1:4925576-4925595 | None:intergenic | 30.0% |
| ! | GTTTTCTATGCTACTATATG+TGG | + | chr6.1:4926073-4926092 | MS.gene074510:intron | 30.0% |
| ! | GTTTTGTAAGATAGCTTCTA+GGG | + | chr6.1:4924442-4924461 | MS.gene074510:intron | 30.0% |
| ! | TAATCTGGTTACTTTGTTGA+TGG | + | chr6.1:4924156-4924175 | MS.gene074510:intron | 30.0% |
| ! | TGTTTTCGACTTTATGGATT+AGG | - | chr6.1:4921682-4921701 | None:intergenic | 30.0% |
| ! | TTAAATTTTCGCAAGTTGTG+TGG | - | chr6.1:4925676-4925695 | None:intergenic | 30.0% |
| !! | AATTGGTTGCCTTTTATTTC+TGG | + | chr6.1:4923370-4923389 | MS.gene074510:CDS | 30.0% |
| !! | AGAAATATTAGTTCTATCGC+CGG | + | chr6.1:4923561-4923580 | MS.gene074510:intron | 30.0% |
| !! | AGTTTTGTAAGATAGCTTCT+AGG | + | chr6.1:4924441-4924460 | MS.gene074510:intron | 30.0% |
| !! | ATGGTAAGACTTTTTCCTAT+TGG | + | chr6.1:4924121-4924140 | MS.gene074510:intron | 30.0% |
| !! | ATTCCAGTTTTTAAGCCTTT+TGG | - | chr6.1:4925053-4925072 | None:intergenic | 30.0% |
| !! | TTGTGTTTGATGATAGCTTT+TGG | + | chr6.1:4923771-4923790 | MS.gene074510:CDS | 30.0% |
| !!! | AACTTTGTTTTTGGAACAGT+TGG | + | chr6.1:4926138-4926157 | MS.gene074510:intron | 30.0% |
| !!! | AGTCTTTGCCTTTTTTGAAT+TGG | + | chr6.1:4923353-4923372 | MS.gene074510:CDS | 30.0% |
| !!! | ATCCATCAACTTAGTTTTGT+AGG | + | chr6.1:4921091-4921110 | MS.gene074510:intron | 30.0% |
| !!! | CTATTTTTTTATTCTCGCCA+AGG | + | chr6.1:4922251-4922270 | MS.gene074510:intron | 30.0% |
| !!! | CTTTTGTTTTTATACCAGGT+TGG | + | chr6.1:4921959-4921978 | MS.gene074510:intron | 30.0% |
| !!! | GATGTGTCAAAGGTTTTTTT+AGG | - | chr6.1:4926243-4926262 | None:intergenic | 30.0% |
| !!! | GCTACTTTTGTTTTTATACC+AGG | + | chr6.1:4921955-4921974 | MS.gene074510:CDS | 30.0% |
| !!! | GTATGTCTCTTTTAGCTTTT+TGG | + | chr6.1:4922591-4922610 | MS.gene074510:intron | 30.0% |
| !!! | GTGGTTTTTTCTCTTTTGTT+TGG | + | chr6.1:4926386-4926405 | MS.gene074510:intron | 30.0% |
| !!! | TCCATCAACTTAGTTTTGTA+GGG | + | chr6.1:4921092-4921111 | MS.gene074510:intron | 30.0% |
| !!! | TTGTTCACTTTTTTCCTCTA+TGG | + | chr6.1:4920824-4920843 | MS.gene074510:CDS | 30.0% |
| AAGCAAAGGTTTACCATGTT+TGG | - | chr6.1:4921486-4921505 | None:intergenic | 35.0% | |
| AATGCAGAAACTTTATGCCA+AGG | - | chr6.1:4923882-4923901 | None:intergenic | 35.0% | |
| ACAATATAGCACTGTATGTC+GGG | - | chr6.1:4923755-4923774 | None:intergenic | 35.0% | |
| ACGAATTCTTCAAGTCCATT+AGG | + | chr6.1:4922431-4922450 | MS.gene074510:CDS | 35.0% | |
| AGACATTTGATGCTGTTGAT+GGG | + | chr6.1:4922393-4922412 | MS.gene074510:intron | 35.0% | |
| AGCCATATCCTTAAGGTATA+GGG | + | chr6.1:4921273-4921292 | MS.gene074510:intron | 35.0% | |
| ATATCCTTAAGGTATAGGGA+GGG | + | chr6.1:4921277-4921296 | MS.gene074510:intron | 35.0% | |
| ATTTAGTTGTCATGGGAACT+GGG | + | chr6.1:4924361-4924380 | MS.gene074510:CDS | 35.0% | |
| CACAATATAGCACTGTATGT+CGG | - | chr6.1:4923756-4923775 | None:intergenic | 35.0% | |
| CACTTATGTGATGAACCAAA+AGG | + | chr6.1:4925035-4925054 | MS.gene074510:CDS | 35.0% | |
| CAGAATGAAAAATACGGTGA+AGG | - | chr6.1:4922482-4922501 | None:intergenic | 35.0% | |
| CATTTACAGGTACATATACC+CGG | + | chr6.1:4925613-4925632 | MS.gene074510:intron | 35.0% | |
| CGAATTCTTCAAGTCCATTA+GGG | + | chr6.1:4922432-4922451 | MS.gene074510:CDS | 35.0% | |
| CTATATACAGGACAAGAACA+TGG | - | chr6.1:4922782-4922801 | None:intergenic | 35.0% | |
| CTGATACTTCCTGTTGTAAA+TGG | + | chr6.1:4922964-4922983 | MS.gene074510:CDS | 35.0% | |
| CTTAAAAACTGGAATGTGCA+TGG | + | chr6.1:4925058-4925077 | MS.gene074510:CDS | 35.0% | |
| GAACCAAAAGGCTTAAAAAC+TGG | + | chr6.1:4925047-4925066 | MS.gene074510:CDS | 35.0% | |
| GAATTCTTCAAGTCCATTAG+GGG | + | chr6.1:4922433-4922452 | MS.gene074510:CDS | 35.0% | |
| TAAATCCCATCAGAGTTATC+TGG | - | chr6.1:4921599-4921618 | None:intergenic | 35.0% | |
| TAACTAGGAAGGAAGCTTAA+AGG | + | chr6.1:4926612-4926631 | MS.gene074510:CDS | 35.0% | |
| TAAGCAATTGGGAAACTGTT+TGG | - | chr6.1:4924699-4924718 | None:intergenic | 35.0% | |
| TAATTGGCTATGATGTCAGA+TGG | - | chr6.1:4924336-4924355 | None:intergenic | 35.0% | |
| TAGACATTTGATGCTGTTGA+TGG | + | chr6.1:4922392-4922411 | MS.gene074510:intron | 35.0% | |
| TAGCCATATCCTTAAGGTAT+AGG | + | chr6.1:4921272-4921291 | MS.gene074510:intron | 35.0% | |
| TATGCTTGTCCAATATGATC+TGG | + | chr6.1:4923591-4923610 | MS.gene074510:intron | 35.0% | |
| TCATAAACTATCACAGCCAA+TGG | + | chr6.1:4924643-4924662 | MS.gene074510:intron | 35.0% | |
| TGAGAGTCGCACAAAAAAAA+AGG | - | chr6.1:4922138-4922157 | None:intergenic | 35.0% | |
| TGCTCGACTATATCATTTGA+AGG | - | chr6.1:4923626-4923645 | None:intergenic | 35.0% | |
| TGGACAAGCATAATTAACAC+CGG | - | chr6.1:4923583-4923602 | None:intergenic | 35.0% | |
| TTCTAACAATTCGGCATGAT+CGG | + | chr6.1:4922847-4922866 | MS.gene074510:intron | 35.0% | |
| TTGCATCAAGGCTAAATGAT+GGG | + | chr6.1:4925446-4925465 | MS.gene074510:CDS | 35.0% | |
| TTGTTCCAGATAACTCTGAT+GGG | + | chr6.1:4921591-4921610 | MS.gene074510:intron | 35.0% | |
| TTTGCAGAAACAGAATCATC+AGG | - | chr6.1:4925917-4925936 | None:intergenic | 35.0% | |
| TTTGTTCCAGATAACTCTGA+TGG | + | chr6.1:4921590-4921609 | MS.gene074510:intron | 35.0% | |
| ! | AATGAGAGACTAGTTCTTCT+TGG | + | chr6.1:4925582-4925601 | MS.gene074510:CDS | 35.0% |
| ! | ACCCTACAAAACTAAGTTGA+TGG | - | chr6.1:4921096-4921115 | None:intergenic | 35.0% |
| ! | CTTTTCTATTGTTCCATTGC+AGG | + | chr6.1:4926588-4926607 | MS.gene074510:intron | 35.0% |
| ! | GATATTTTGCAGTCCAAACA+TGG | + | chr6.1:4921470-4921489 | MS.gene074510:intron | 35.0% |
| ! | TAGTACATATTTTGCCACGT+AGG | - | chr6.1:4920785-4920804 | None:intergenic | 35.0% |
| ! | TTGATAACTTGTGCTTGCTA+TGG | + | chr6.1:4926514-4926533 | MS.gene074510:intron | 35.0% |
| !! | AAAGTGTGTTTTTCAGTCCT+TGG | - | chr6.1:4922271-4922290 | None:intergenic | 35.0% |
| !! | AACAGGAAGTATCAGTGTAT+TGG | - | chr6.1:4922959-4922978 | None:intergenic | 35.0% |
| !! | ACAAAACTGACTTGTGAAGT+GGG | - | chr6.1:4921008-4921027 | None:intergenic | 35.0% |
| !! | ACTTCACAAGTCAGTTTTGT+AGG | + | chr6.1:4921008-4921027 | MS.gene074510:intron | 35.0% |
| !! | AGTTTGAAGCACTTGCTTTT+GGG | + | chr6.1:4922668-4922687 | MS.gene074510:intron | 35.0% |
| !! | ATGGGTTATATTGGTTCTCA+TGG | + | chr6.1:4920715-4920734 | MS.gene074510:CDS | 35.0% |
| !! | CTCTTGATGTTAACCGATTT+TGG | + | chr6.1:4922008-4922027 | MS.gene074510:intron | 35.0% |
| !! | CTTCACAAGTCAGTTTTGTA+GGG | + | chr6.1:4921009-4921028 | MS.gene074510:intron | 35.0% |
| !! | GTTTAATTTGCATGCACTGA+TGG | - | chr6.1:4923236-4923255 | None:intergenic | 35.0% |
| !! | TACAAAACTGACTTGTGAAG+TGG | - | chr6.1:4921009-4921028 | None:intergenic | 35.0% |
| !! | TTAGGATGATTAATGGACTC+AGG | - | chr6.1:4921664-4921683 | None:intergenic | 35.0% |
| !!! | AGCTTATTTTAGGCCTTGTT+TGG | + | chr6.1:4924497-4924516 | MS.gene074510:intron | 35.0% |
| !!! | ATTTTTCTACAGGTGCTGAA+TGG | + | chr6.1:4923311-4923330 | MS.gene074510:intron | 35.0% |
| !!! | TAGTTTTGTAGGGTTGATTC+AGG | + | chr6.1:4921102-4921121 | MS.gene074510:intron | 35.0% |
| AAGCATCCAAGATGTGTCAA+AGG | - | chr6.1:4926253-4926272 | None:intergenic | 40.0% | |
| AAGGTTGTGAAGTCGAGAAA+TGG | + | chr6.1:4924076-4924095 | MS.gene074510:CDS | 40.0% | |
| AATATGTACTACAGCCCTTC+TGG | + | chr6.1:4920794-4920813 | MS.gene074510:CDS | 40.0% | |
| ACCTGAAGCAATATATTCCC+AGG | - | chr6.1:4925997-4926016 | None:intergenic | 40.0% | |
| ATCGGTTAACATCAAGAGAC+TGG | - | chr6.1:4922006-4922025 | None:intergenic | 40.0% | |
| ATTATCATAAGACCCTCCGT+AGG | - | chr6.1:4922991-4923010 | None:intergenic | 40.0% | |
| CACACTTAGGACCTATAATG+CGG | - | chr6.1:4926369-4926388 | None:intergenic | 40.0% | |
| CATATCCTTAAGGTATAGGG+AGG | + | chr6.1:4921276-4921295 | MS.gene074510:intron | 40.0% | |
| CATGAAATTACGAATGCCCT+GGG | + | chr6.1:4925977-4925996 | MS.gene074510:CDS | 40.0% | |
| CATTTAGTTGTCATGGGAAC+TGG | + | chr6.1:4924360-4924379 | MS.gene074510:CDS | 40.0% | |
| CCAATTGAGGTGAGTATATC+TGG | - | chr6.1:4921898-4921917 | None:intergenic | 40.0% | |
| CCAGATATACTCACCTCAAT+TGG | + | chr6.1:4921895-4921914 | MS.gene074510:intron | 40.0% | |
| CCTGAAGCAATATATTCCCA+GGG | - | chr6.1:4925996-4926015 | None:intergenic | 40.0% | |
| CTACTATTGTCTGCATTGCT+TGG | + | chr6.1:4921624-4921643 | MS.gene074510:CDS | 40.0% | |
| CTATACATACTTGAGTGCGA+CGG | - | chr6.1:4923808-4923827 | None:intergenic | 40.0% | |
| CTCCCTATACCTTAAGGATA+TGG | - | chr6.1:4921278-4921297 | None:intergenic | 40.0% | |
| CTTGCATCAAGGCTAAATGA+TGG | + | chr6.1:4925445-4925464 | MS.gene074510:CDS | 40.0% | |
| CTTGGTTACTGTGCATTTAC+AGG | + | chr6.1:4925600-4925619 | MS.gene074510:CDS | 40.0% | |
| CTTTATGCCAAGGACTAATG+TGG | - | chr6.1:4923872-4923891 | None:intergenic | 40.0% | |
| GCTTACTTTCGGATATCTTG+TGG | + | chr6.1:4924383-4924402 | MS.gene074510:CDS | 40.0% | |
| GTTCCCATGACAACTAAATG+TGG | - | chr6.1:4924360-4924379 | None:intergenic | 40.0% | |
| TAAGAAACTACCAAGGGAAG+TGG | - | chr6.1:4924898-4924917 | None:intergenic | 40.0% | |
| TCATGAAATTACGAATGCCC+TGG | + | chr6.1:4925976-4925995 | MS.gene074510:CDS | 40.0% | |
| TCCTGTTGTAAATGGACCTA+CGG | + | chr6.1:4922972-4922991 | MS.gene074510:CDS | 40.0% | |
| TGATGCAAGTGCATTAGCAA+TGG | - | chr6.1:4925434-4925453 | None:intergenic | 40.0% | |
| TGTGCAAAATGAACCCATCT+TGG | - | chr6.1:4921932-4921951 | None:intergenic | 40.0% | |
| TGTGTGGAGTAAATTGTTCG+AGG | - | chr6.1:4925660-4925679 | None:intergenic | 40.0% | |
| TGTTCCATTGCAGGATAACT+AGG | + | chr6.1:4926597-4926616 | MS.gene074510:intron | 40.0% | |
| TTAGTGCACTCATCTTGACT+CGG | - | chr6.1:4922193-4922212 | None:intergenic | 40.0% | |
| TTGCTAATGCACTTGCATCA+AGG | + | chr6.1:4925434-4925453 | MS.gene074510:CDS | 40.0% | |
| TTTGCTTGCCACTATGATTG+TGG | + | chr6.1:4924866-4924885 | MS.gene074510:intron | 40.0% | |
| ! | ATCCTCATTACTCGGCATTT+TGG | + | chr6.1:4921440-4921459 | MS.gene074510:intron | 40.0% |
| ! | CAAGGTTAGCCATATCCTTA+AGG | + | chr6.1:4921266-4921285 | MS.gene074510:intron | 40.0% |
| ! | GCCCTTTCTGTGAGTTTTTA+TGG | + | chr6.1:4923047-4923066 | MS.gene074510:intron | 40.0% |
| ! | TAACAAAGCCTTTTCGTGCT+AGG | - | chr6.1:4925183-4925202 | None:intergenic | 40.0% |
| ! | TACATTTTATGGCGCAACGT+GGG | + | chr6.1:4922744-4922763 | MS.gene074510:CDS | 40.0% |
| ! | TTACATTTTATGGCGCAACG+TGG | + | chr6.1:4922743-4922762 | MS.gene074510:CDS | 40.0% |
| !! | AGATGGGTTCATTTTGCACA+CGG | + | chr6.1:4921932-4921951 | MS.gene074510:CDS | 40.0% |
| !! | CAGTTTGAAGCACTTGCTTT+TGG | + | chr6.1:4922667-4922686 | MS.gene074510:intron | 40.0% |
| !! | CAGTTTTGTAGGGTTGAGTT+AGG | + | chr6.1:4921019-4921038 | MS.gene074510:intron | 40.0% |
| !! | GAAAGTACTTCTTCCACACA+TGG | - | chr6.1:4922701-4922720 | None:intergenic | 40.0% |
| !! | TAAGATAGCTTCTAGGGTTG+AGG | + | chr6.1:4924448-4924467 | MS.gene074510:intron | 40.0% |
| !! | TATCCGTTTGTTGTCCTTGT+CGG | + | chr6.1:4924200-4924219 | MS.gene074510:CDS | 40.0% |
| !! | TGTGTGGAAGAAGTACTTTC+TGG | + | chr6.1:4922701-4922720 | MS.gene074510:CDS | 40.0% |
| !!! | AGACGCGTCATTTTTGTTTC+TGG | + | chr6.1:4924253-4924272 | MS.gene074510:intron | 40.0% |
| AGCCAAAATGCCGAGTAATG+AGG | - | chr6.1:4921445-4921464 | None:intergenic | 45.0% | |
| AGTGCATTAGCAATGGCAAG+TGG | - | chr6.1:4925427-4925446 | None:intergenic | 45.0% | |
| ATGCGGCGACATACATGATA+TGG | - | chr6.1:4926352-4926371 | None:intergenic | 45.0% | |
| ATGGGAACTGGGCTTACTTT+CGG | + | chr6.1:4924372-4924391 | MS.gene074510:CDS | 45.0% | |
| CAAACCCTCCCTATACCTTA+AGG | - | chr6.1:4921284-4921303 | None:intergenic | 45.0% | |
| CACAGTACCACATTAGTCCT+TGG | + | chr6.1:4923862-4923881 | MS.gene074510:intron | 45.0% | |
| CAGAAACAGAATCATCAGGC+AGG | - | chr6.1:4925913-4925932 | None:intergenic | 45.0% | |
| CAGCAGTGAAAAAGTGACAG+AGG | - | chr6.1:4923017-4923036 | None:intergenic | 45.0% | |
| CATGTATGTCGCCGCATTAT+AGG | + | chr6.1:4926355-4926374 | MS.gene074510:intron | 45.0% | |
| CCATTGCAGGATAACTAGGA+AGG | + | chr6.1:4926601-4926620 | MS.gene074510:intron | 45.0% | |
| CCCTGGGAATATATTGCTTC+AGG | + | chr6.1:4925993-4926012 | MS.gene074510:CDS | 45.0% | |
| CCTTCCTAGTTATCCTGCAA+TGG | - | chr6.1:4926604-4926623 | None:intergenic | 45.0% | |
| CGCATTATAGGTCCTAAGTG+TGG | + | chr6.1:4926367-4926386 | MS.gene074510:intron | 45.0% | |
| CGTTCATGACGTGTTCATGA+CGG | + | chr6.1:4925264-4925283 | MS.gene074510:intron | 45.0% | |
| CTAGTTTAAACGAGCACGCA+AGG | + | chr6.1:4921248-4921267 | MS.gene074510:intron | 45.0% | |
| CTTAAGGTATAGGGAGGGTT+TGG | + | chr6.1:4921282-4921301 | MS.gene074510:intron | 45.0% | |
| CTTACCATTGCTAACGCAAG+AGG | - | chr6.1:4924109-4924128 | None:intergenic | 45.0% | |
| CTTGCCACTATGATTGTGGT+AGG | + | chr6.1:4924870-4924889 | MS.gene074510:intron | 45.0% | |
| CTTGTCCTAAGCTATGTGTC+CGG | + | chr6.1:4926167-4926186 | MS.gene074510:intron | 45.0% | |
| GCAAAATGAACCCATCTTGG+AGG | - | chr6.1:4921929-4921948 | None:intergenic | 45.0% | |
| GGAACCTACCACAATCATAG+TGG | - | chr6.1:4924877-4924896 | None:intergenic | 45.0% | |
| GGCAAGTGGTAGATACATGA+GGG | - | chr6.1:4925413-4925432 | None:intergenic | 45.0% | |
| GGTTGAGTTAGGTCCACATT+GGG | + | chr6.1:4921030-4921049 | MS.gene074510:intron | 45.0% | |
| GTCTAAGGGTCTGTTTGCAT+TGG | - | chr6.1:4924746-4924765 | None:intergenic | 45.0% | |
| GTTGTAAATGGACCTACGGA+GGG | + | chr6.1:4922976-4922995 | MS.gene074510:CDS | 45.0% | |
| GTTTGGCGGGAATGAAAAAG+AGG | + | chr6.1:4921299-4921318 | MS.gene074510:intron | 45.0% | |
| TATGCCTCTTGCGTTAGCAA+TGG | + | chr6.1:4924102-4924121 | MS.gene074510:CDS | 45.0% | |
| TCCGTAGGTCCATTTACAAC+AGG | - | chr6.1:4922976-4922995 | None:intergenic | 45.0% | |
| TGAACAAAGCGAGTCCAGAA+GGG | - | chr6.1:4920811-4920830 | None:intergenic | 45.0% | |
| TGGCAAGTGGTAGATACATG+AGG | - | chr6.1:4925414-4925433 | None:intergenic | 45.0% | |
| TGGTGTAGATCATTCCTACG+TGG | + | chr6.1:4920768-4920787 | MS.gene074510:CDS | 45.0% | |
| TGTCCGACAGACAAACAACT+CGG | + | chr6.1:4926209-4926228 | MS.gene074510:intron | 45.0% | |
| TGTCCGAGTTGTTTGTCTGT+CGG | - | chr6.1:4926215-4926234 | None:intergenic | 45.0% | |
| TGTTGTAAATGGACCTACGG+AGG | + | chr6.1:4922975-4922994 | MS.gene074510:CDS | 45.0% | |
| TTGTCCTAAGCTATGTGTCC+GGG | + | chr6.1:4926168-4926187 | MS.gene074510:intron | 45.0% | |
| ! | AGGTCTTATCTCACCCAATG+TGG | - | chr6.1:4921046-4921065 | None:intergenic | 45.0% |
| ! | ATGTCGGGACATCTGAAATC+CGG | - | chr6.1:4923740-4923759 | None:intergenic | 45.0% |
| !! | ATAGCTTCTAGGGTTGAGGT+AGG | + | chr6.1:4924452-4924471 | MS.gene074510:intron | 45.0% |
| !! | GAAGAAGTACTTTCTGGTGG+TGG | + | chr6.1:4922707-4922726 | MS.gene074510:CDS | 45.0% |
| !! | GATGGGTTCATTTTGCACAC+GGG | + | chr6.1:4921933-4921952 | MS.gene074510:CDS | 45.0% |
| !! | GTGGAAGAAGTACTTTCTGG+TGG | + | chr6.1:4922704-4922723 | MS.gene074510:CDS | 45.0% |
| !! | TTCTACAGGTGCTGAATGGT+GGG | + | chr6.1:4923315-4923334 | MS.gene074510:intron | 45.0% |
| !! | TTTCTACAGGTGCTGAATGG+TGG | + | chr6.1:4923314-4923333 | MS.gene074510:intron | 45.0% |
| !!! | CACTTTTTCACTGCTGTCGT+TGG | + | chr6.1:4923021-4923040 | MS.gene074510:CDS | 45.0% |
| !! | AATAAAAATAAAAAAATTGT+AGG | - | chr6.1:4921373-4921392 | None:intergenic | 5.0% |
| !! | ATACAAAAAATAAAAATATT+AGG | - | chr6.1:4923500-4923519 | None:intergenic | 5.0% |
| !! | TACAAAAAATAAAAATATTA+GGG | - | chr6.1:4923499-4923518 | None:intergenic | 5.0% |
| !!! | ATATTTTTATTTTTTGTATA+TGG | + | chr6.1:4923501-4923520 | MS.gene074510:intron | 5.0% |
| AAGGTATAGGGAGGGTTTGG+CGG | + | chr6.1:4921285-4921304 | MS.gene074510:intron | 50.0% | |
| ACATAAGCACTCCTCCGACA+AGG | - | chr6.1:4924217-4924236 | None:intergenic | 50.0% | |
| ACATACTTGAGTGCGACGGT+TGG | - | chr6.1:4923804-4923823 | None:intergenic | 50.0% | |
| AGTACTCACGGCATCCATAG+AGG | - | chr6.1:4920841-4920860 | None:intergenic | 50.0% | |
| CCTCCGACAAGGACAACAAA+CGG | - | chr6.1:4924206-4924225 | None:intergenic | 50.0% | |
| CTGACACATGTTTGCCAACC+CGG | - | chr6.1:4926189-4926208 | None:intergenic | 50.0% | |
| GGGTTGAGTTAGGTCCACAT+TGG | + | chr6.1:4921029-4921048 | MS.gene074510:intron | 50.0% | |
| GTGAACAAAGCGAGTCCAGA+AGG | - | chr6.1:4920812-4920831 | None:intergenic | 50.0% | |
| TGATCGAACAGCTCCCCTAA+TGG | - | chr6.1:4922449-4922468 | None:intergenic | 50.0% | |
| TTAGGGGAGCTGTTCGATCA+TGG | + | chr6.1:4922449-4922468 | MS.gene074510:CDS | 50.0% | |
| ! | CAAAGCCTTTTCGTGCTAGG+TGG | - | chr6.1:4925180-4925199 | None:intergenic | 50.0% |
| ! | CTTTTCGTGCTAGGTGGAGT+CGG | - | chr6.1:4925174-4925193 | None:intergenic | 50.0% |
| ! | TCTAGGGTTGAGGTAGGCTT+AGG | + | chr6.1:4924458-4924477 | MS.gene074510:intron | 50.0% |
| ! | TTTGGGAGCACATCCATGTG+TGG | + | chr6.1:4922685-4922704 | MS.gene074510:CDS | 50.0% |
| !! | AGGTAGGCTTAGGCCTTGTT+TGG | + | chr6.1:4924468-4924487 | MS.gene074510:intron | 50.0% |
| !! | GAATGGTGGGCTCAGCAATT+TGG | + | chr6.1:4923328-4923347 | MS.gene074510:CDS | 50.0% |
| !! | TTGTCGGAGGAGTGCTTATG+TGG | + | chr6.1:4924216-4924235 | MS.gene074510:CDS | 50.0% |
| AGGTATAGGGAGGGTTTGGC+GGG | + | chr6.1:4921286-4921305 | MS.gene074510:intron | 55.0% | |
| CCAACCCGGACACATAGCTT+AGG | - | chr6.1:4926175-4926194 | None:intergenic | 55.0% | |
| CCTAAGCTATGTGTCCGGGT+TGG | + | chr6.1:4926172-4926191 | MS.gene074510:intron | 55.0% | |
| CGACTCCACCTAGCACGAAA+AGG | + | chr6.1:4925172-4925191 | MS.gene074510:intron | 55.0% | |
| GCTAGGTGGAGTCGGTTACA+TGG | - | chr6.1:4925166-4925185 | None:intergenic | 55.0% | |
| GGACACAGCTCCTCCAAGAT+GGG | + | chr6.1:4921916-4921935 | MS.gene074510:CDS | 55.0% | |
| GGAGGAGCTGTGTCCAATTG+AGG | - | chr6.1:4921911-4921930 | None:intergenic | 55.0% | |
| GTGGTAGGTTCCACTTCCCT+TGG | + | chr6.1:4924885-4924904 | MS.gene074510:intron | 55.0% | |
| TGGACACAGCTCCTCCAAGA+TGG | + | chr6.1:4921915-4921934 | MS.gene074510:CDS | 55.0% | |
| !! | CCGTTTGTTGTCCTTGTCGG+AGG | + | chr6.1:4924203-4924222 | MS.gene074510:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 4920715 | 4926631 | 4920715 | ID=MS.gene074510 |
| chr6.1 | mRNA | 4920715 | 4926631 | 4920715 | ID=MS.gene074510.t1;Parent=MS.gene074510 |
| chr6.1 | exon | 4920715 | 4920851 | 4920715 | ID=MS.gene074510.t1.exon1;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4920715 | 4920851 | 4920715 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4921482 | 4921491 | 4921482 | ID=MS.gene074510.t1.exon2;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4921482 | 4921491 | 4921482 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4921600 | 4921650 | 4921600 | ID=MS.gene074510.t1.exon3;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4921600 | 4921650 | 4921600 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4921899 | 4921976 | 4921899 | ID=MS.gene074510.t1.exon4;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4921899 | 4921976 | 4921899 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4922395 | 4922470 | 4922395 | ID=MS.gene074510.t1.exon5;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4922395 | 4922470 | 4922395 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4922568 | 4922590 | 4922568 | ID=MS.gene074510.t1.exon6;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4922568 | 4922590 | 4922568 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4922670 | 4922770 | 4922670 | ID=MS.gene074510.t1.exon7;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4922670 | 4922770 | 4922670 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4922948 | 4923042 | 4922948 | ID=MS.gene074510.t1.exon8;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4922948 | 4923042 | 4922948 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4923323 | 4923391 | 4923323 | ID=MS.gene074510.t1.exon9;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4923323 | 4923391 | 4923323 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4923748 | 4923817 | 4923748 | ID=MS.gene074510.t1.exon10;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4923748 | 4923817 | 4923748 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4924060 | 4924123 | 4924060 | ID=MS.gene074510.t1.exon11;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4924060 | 4924123 | 4924060 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4924197 | 4924237 | 4924197 | ID=MS.gene074510.t1.exon12;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4924197 | 4924237 | 4924197 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4924320 | 4924404 | 4924320 | ID=MS.gene074510.t1.exon13;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4924320 | 4924404 | 4924320 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4925017 | 4925079 | 4925017 | ID=MS.gene074510.t1.exon14;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4925017 | 4925079 | 4925017 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4925409 | 4925467 | 4925409 | ID=MS.gene074510.t1.exon15;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4925409 | 4925467 | 4925409 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4925569 | 4925621 | 4925569 | ID=MS.gene074510.t1.exon16;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4925569 | 4925621 | 4925569 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4925942 | 4926014 | 4925942 | ID=MS.gene074510.t1.exon17;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4925942 | 4926014 | 4925942 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| chr6.1 | exon | 4926610 | 4926631 | 4926610 | ID=MS.gene074510.t1.exon18;Parent=MS.gene074510.t1 |
| chr6.1 | CDS | 4926610 | 4926631 | 4926610 | ID=cds.MS.gene074510.t1;Parent=MS.gene074510.t1 |
| Gene Sequence |
| Protein sequence |
