Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07512.t1 | XP_013468875.1 | 97.9 | 659 | 14 | 0 | 1 | 659 | 256 | 914 | 0.00E+00 | 1250.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07512.t1 | Q9ZSB5 | 63.6 | 670 | 218 | 5 | 2 | 659 | 243 | 898 | 4.7e-245 | 848.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07512.t1 | A0A072VM85 | 97.9 | 659 | 14 | 0 | 1 | 659 | 256 | 914 | 0.0e+00 | 1250.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07512 | MS.gene07513 | PPI |
| MS.gene07512 | MS.gene49850 | PPI |
| MS.gene07512 | MS.gene062155 | PPI |
| MS.gene07512 | MS.gene66284 | PPI |
| MS.gene07512 | MS.gene26652 | PPI |
| MS.gene07512 | MS.gene037502 | PPI |
| MS.gene07512 | MS.gene70077 | PPI |
| MS.gene07512 | MS.gene017678 | PPI |
| MS.gene07512 | MS.gene057841 | PPI |
| MS.gene07512 | MS.gene70072 | PPI |
| MS.gene07512 | MS.gene013955 | PPI |
| MS.gene07512 | MS.gene004975 | PPI |
| MS.gene07512 | MS.gene057838 | PPI |
| MS.gene07512 | MS.gene75111 | PPI |
| MS.gene07512 | MS.gene030258 | PPI |
| MS.gene07512 | MS.gene057833 | PPI |
| MS.gene07512 | MS.gene86827 | PPI |
| MS.gene07512 | MS.gene70078 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07512.t1 | MTR_1g077980 | 97.876 | 659 | 14 | 0 | 1 | 659 | 256 | 914 | 0.0 | 1349 |
| MS.gene07512.t1 | MTR_7g088760 | 53.092 | 663 | 286 | 9 | 8 | 659 | 256 | 904 | 0.0 | 697 |
| MS.gene07512.t1 | MTR_7g088760 | 51.765 | 680 | 286 | 10 | 8 | 659 | 256 | 921 | 0.0 | 687 |
| MS.gene07512.t1 | MTR_2g087710 | 54.120 | 619 | 244 | 11 | 59 | 656 | 263 | 862 | 0.0 | 638 |
| MS.gene07512.t1 | MTR_7g106570 | 50.683 | 659 | 281 | 13 | 21 | 656 | 251 | 888 | 0.0 | 585 |
| MS.gene07512.t1 | MTR_1g014260 | 33.143 | 175 | 91 | 6 | 502 | 653 | 351 | 522 | 3.50e-22 | 102 |
| MS.gene07512.t1 | MTR_1g014260 | 28.723 | 188 | 114 | 3 | 63 | 250 | 179 | 346 | 5.59e-15 | 79.0 |
| MS.gene07512.t1 | MTR_4g115880 | 31.737 | 167 | 88 | 5 | 510 | 653 | 415 | 578 | 6.63e-21 | 97.4 |
| MS.gene07512.t1 | MTR_4g115880 | 30.144 | 209 | 97 | 5 | 63 | 243 | 195 | 382 | 1.32e-16 | 84.0 |
| MS.gene07512.t1 | MTR_6g022310 | 38.312 | 154 | 89 | 5 | 506 | 658 | 280 | 428 | 6.49e-20 | 94.7 |
| MS.gene07512.t1 | MTR_6g022310 | 29.897 | 194 | 106 | 7 | 65 | 256 | 127 | 292 | 1.88e-11 | 67.8 |
| MS.gene07512.t1 | MTR_1g014680 | 38.158 | 152 | 87 | 4 | 507 | 655 | 339 | 486 | 8.48e-20 | 94.7 |
| MS.gene07512.t1 | MTR_5g430360 | 37.908 | 153 | 87 | 6 | 510 | 658 | 136 | 284 | 1.89e-18 | 89.7 |
| MS.gene07512.t1 | MTR_5g030360 | 37.908 | 153 | 87 | 6 | 510 | 658 | 304 | 452 | 3.24e-18 | 89.4 |
| MS.gene07512.t1 | MTR_3g100480 | 34.868 | 152 | 92 | 4 | 507 | 655 | 741 | 888 | 5.81e-18 | 89.0 |
| MS.gene07512.t1 | MTR_5g032380 | 36.242 | 149 | 88 | 4 | 510 | 655 | 582 | 726 | 1.63e-17 | 87.4 |
| MS.gene07512.t1 | MTR_3g083600 | 31.837 | 245 | 130 | 6 | 10 | 245 | 170 | 386 | 1.99e-17 | 87.4 |
| MS.gene07512.t1 | MTR_3g083600 | 35.338 | 133 | 70 | 4 | 538 | 655 | 938 | 1069 | 1.82e-15 | 80.9 |
| MS.gene07512.t1 | MTR_6g022300 | 37.333 | 150 | 88 | 5 | 510 | 658 | 224 | 368 | 2.30e-17 | 86.7 |
| MS.gene07512.t1 | MTR_8g090190 | 32.203 | 177 | 99 | 6 | 496 | 657 | 194 | 364 | 2.59e-17 | 84.7 |
| MS.gene07512.t1 | MTR_8g090190 | 28.436 | 211 | 129 | 7 | 59 | 258 | 19 | 218 | 9.38e-11 | 64.7 |
| MS.gene07512.t1 | MTR_2g071620 | 34.228 | 149 | 91 | 4 | 510 | 655 | 625 | 769 | 3.72e-17 | 86.3 |
| MS.gene07512.t1 | MTR_6g022290 | 36.667 | 150 | 89 | 5 | 510 | 658 | 186 | 330 | 4.53e-17 | 85.5 |
| MS.gene07512.t1 | MTR_6g022290 | 27.551 | 196 | 108 | 6 | 65 | 256 | 29 | 194 | 1.43e-11 | 67.8 |
| MS.gene07512.t1 | MTR_4g130940 | 36.424 | 151 | 91 | 5 | 507 | 655 | 248 | 395 | 1.72e-16 | 84.0 |
| MS.gene07512.t1 | MTR_4g130940 | 36.424 | 151 | 91 | 5 | 507 | 655 | 248 | 395 | 2.26e-16 | 83.6 |
| MS.gene07512.t1 | MTR_8g067060 | 37.162 | 148 | 85 | 5 | 515 | 658 | 357 | 500 | 5.06e-16 | 82.0 |
| MS.gene07512.t1 | MTR_8g471100 | 37.162 | 148 | 85 | 5 | 515 | 658 | 366 | 509 | 5.26e-16 | 82.0 |
| MS.gene07512.t1 | MTR_3g087140 | 29.050 | 179 | 106 | 5 | 496 | 659 | 194 | 366 | 2.37e-15 | 78.6 |
| MS.gene07512.t1 | MTR_5g066000 | 31.579 | 152 | 96 | 5 | 507 | 655 | 699 | 845 | 3.49e-15 | 80.1 |
| MS.gene07512.t1 | MTR_0279s0020 | 37.209 | 129 | 75 | 4 | 531 | 658 | 163 | 286 | 9.62e-15 | 75.9 |
| MS.gene07512.t1 | MTR_3g100480 | 30.556 | 180 | 92 | 5 | 507 | 655 | 741 | 918 | 1.41e-14 | 78.2 |
| MS.gene07512.t1 | MTR_0279s0020 | 37.302 | 126 | 73 | 4 | 531 | 655 | 172 | 292 | 5.05e-14 | 74.3 |
| MS.gene07512.t1 | MTR_2g070390 | 33.108 | 148 | 93 | 5 | 510 | 655 | 185 | 328 | 1.36e-11 | 68.2 |
| MS.gene07512.t1 | MTR_3g108660 | 33.846 | 130 | 82 | 3 | 510 | 636 | 255 | 383 | 2.36e-11 | 67.8 |
| MS.gene07512.t1 | MTR_3g108660 | 33.846 | 130 | 82 | 3 | 510 | 636 | 255 | 383 | 2.82e-11 | 67.4 |
| MS.gene07512.t1 | MTR_1g010040 | 31.538 | 130 | 85 | 3 | 510 | 636 | 255 | 383 | 5.66e-11 | 66.6 |
| MS.gene07512.t1 | MTR_1g010040 | 31.538 | 130 | 85 | 3 | 510 | 636 | 255 | 383 | 6.02e-11 | 66.2 |
| MS.gene07512.t1 | MTR_4g077320 | 31.250 | 112 | 72 | 1 | 549 | 655 | 365 | 476 | 7.66e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07512.t1 | AT4G10570 | 67.411 | 672 | 189 | 6 | 2 | 659 | 243 | 898 | 0.0 | 914 |
| MS.gene07512.t1 | AT4G10590 | 67.213 | 671 | 192 | 6 | 2 | 659 | 242 | 897 | 0.0 | 905 |
| MS.gene07512.t1 | AT4G10590 | 67.213 | 671 | 192 | 6 | 2 | 659 | 242 | 897 | 0.0 | 905 |
| MS.gene07512.t1 | AT4G10590 | 67.213 | 671 | 192 | 6 | 2 | 659 | 242 | 897 | 0.0 | 905 |
| MS.gene07512.t1 | AT4G10590 | 67.213 | 671 | 192 | 6 | 2 | 659 | 242 | 897 | 0.0 | 905 |
| MS.gene07512.t1 | AT1G32850 | 64.350 | 662 | 212 | 6 | 3 | 659 | 241 | 883 | 0.0 | 848 |
| MS.gene07512.t1 | AT2G40930 | 54.436 | 665 | 272 | 11 | 8 | 655 | 265 | 915 | 0.0 | 691 |
| MS.gene07512.t1 | AT2G40930 | 54.436 | 665 | 272 | 11 | 8 | 655 | 265 | 915 | 0.0 | 691 |
| MS.gene07512.t1 | AT5G22030 | 54.489 | 646 | 258 | 13 | 25 | 656 | 288 | 911 | 0.0 | 671 |
| MS.gene07512.t1 | AT5G22030 | 54.489 | 646 | 258 | 13 | 25 | 656 | 246 | 869 | 0.0 | 671 |
| MS.gene07512.t1 | AT4G31670 | 37.908 | 153 | 88 | 4 | 507 | 656 | 326 | 474 | 1.83e-20 | 96.3 |
| MS.gene07512.t1 | AT2G24640 | 37.255 | 153 | 89 | 4 | 507 | 656 | 162 | 310 | 3.44e-20 | 94.7 |
| MS.gene07512.t1 | AT5G46740 | 36.538 | 156 | 92 | 5 | 506 | 658 | 111 | 262 | 5.27e-20 | 94.4 |
| MS.gene07512.t1 | AT2G24640 | 37.255 | 153 | 89 | 4 | 507 | 656 | 332 | 480 | 6.93e-20 | 94.7 |
| MS.gene07512.t1 | AT2G32780 | 35.533 | 197 | 97 | 6 | 56 | 245 | 189 | 362 | 6.95e-20 | 95.1 |
| MS.gene07512.t1 | AT2G32780 | 37.037 | 135 | 65 | 5 | 539 | 656 | 952 | 1083 | 1.53e-14 | 78.2 |
| MS.gene07512.t1 | AT5G46740 | 36.538 | 156 | 92 | 5 | 506 | 658 | 320 | 471 | 8.44e-20 | 94.4 |
| MS.gene07512.t1 | AT1G04860 | 34.783 | 184 | 84 | 4 | 64 | 241 | 230 | 383 | 6.88e-19 | 92.0 |
| MS.gene07512.t1 | AT1G04860 | 38.931 | 131 | 64 | 6 | 539 | 656 | 830 | 957 | 5.75e-14 | 76.3 |
| MS.gene07512.t1 | AT4G17895 | 35.256 | 156 | 94 | 5 | 506 | 658 | 327 | 478 | 1.46e-17 | 87.4 |
| MS.gene07512.t1 | AT1G17110 | 34.899 | 149 | 90 | 4 | 510 | 655 | 603 | 747 | 1.90e-17 | 87.4 |
| MS.gene07512.t1 | AT1G17110 | 34.899 | 149 | 90 | 4 | 510 | 655 | 599 | 743 | 1.94e-17 | 87.4 |
| MS.gene07512.t1 | AT1G17110 | 34.899 | 149 | 90 | 4 | 510 | 655 | 599 | 743 | 1.94e-17 | 87.4 |
| MS.gene07512.t1 | AT5G10790 | 29.412 | 170 | 91 | 5 | 510 | 653 | 233 | 399 | 2.94e-17 | 85.1 |
| MS.gene07512.t1 | AT5G10790 | 29.412 | 170 | 91 | 5 | 510 | 653 | 362 | 528 | 4.89e-17 | 85.1 |
| MS.gene07512.t1 | AT4G24560 | 34.228 | 149 | 90 | 4 | 510 | 655 | 703 | 846 | 1.20e-16 | 84.7 |
| MS.gene07512.t1 | AT5G65450 | 34.667 | 150 | 90 | 5 | 510 | 655 | 506 | 651 | 1.35e-15 | 81.3 |
| MS.gene07512.t1 | AT5G65450 | 34.667 | 150 | 90 | 5 | 510 | 655 | 487 | 632 | 1.60e-15 | 80.9 |
| MS.gene07512.t1 | AT4G39910 | 33.129 | 163 | 89 | 6 | 510 | 657 | 211 | 368 | 1.65e-15 | 79.3 |
| MS.gene07512.t1 | AT2G22310 | 32.934 | 167 | 86 | 7 | 510 | 658 | 174 | 332 | 4.60e-15 | 77.4 |
| MS.gene07512.t1 | AT2G22310 | 32.934 | 167 | 86 | 7 | 510 | 658 | 169 | 327 | 5.09e-15 | 77.0 |
| MS.gene07512.t1 | AT2G22310 | 32.934 | 167 | 86 | 7 | 510 | 658 | 206 | 364 | 6.92e-15 | 77.4 |
| MS.gene07512.t1 | AT5G57990 | 32.450 | 151 | 92 | 5 | 506 | 655 | 268 | 409 | 1.47e-14 | 77.8 |
| MS.gene07512.t1 | AT4G30890 | 37.288 | 118 | 70 | 4 | 541 | 656 | 436 | 551 | 9.65e-13 | 71.6 |
| MS.gene07512.t1 | AT4G30890 | 37.288 | 118 | 70 | 4 | 541 | 656 | 436 | 551 | 9.65e-13 | 71.6 |
| MS.gene07512.t1 | AT4G30890 | 37.288 | 118 | 70 | 4 | 541 | 656 | 436 | 551 | 9.65e-13 | 71.6 |
| MS.gene07512.t1 | AT3G49600 | 32.143 | 140 | 86 | 4 | 510 | 641 | 253 | 391 | 1.92e-11 | 68.2 |
| MS.gene07512.t1 | AT3G49600 | 32.143 | 140 | 86 | 4 | 510 | 641 | 253 | 391 | 1.99e-11 | 68.2 |
| MS.gene07512.t1 | AT3G49600 | 32.143 | 140 | 86 | 4 | 510 | 641 | 253 | 391 | 1.99e-11 | 68.2 |
| MS.gene07512.t1 | AT3G14400 | 31.788 | 151 | 97 | 5 | 507 | 655 | 188 | 334 | 2.30e-11 | 67.4 |
| MS.gene07512.t1 | AT3G14400 | 28.358 | 201 | 110 | 5 | 66 | 257 | 25 | 200 | 3.52e-11 | 67.0 |
Find 157 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCCCTTGGTTACTTATT+TGG | 0.167537 | 1.3:+55756427 | MS.gene07512:CDS |
| GTGGAAATTGCCAGAGATTT+TGG | 0.202696 | 1.3:+55757091 | MS.gene07512:CDS |
| GTGAATTAGCACTTGCATTT+GGG | 0.290290 | 1.3:+55753237 | MS.gene07512:CDS |
| TTGAGGAAACTTTGGTCCTC+TGG | 0.299288 | 1.3:+55753266 | MS.gene07512:CDS |
| CTTCCTGAAGTTCACAAAAC+TGG | 0.302951 | 1.3:+55756821 | MS.gene07512:CDS |
| GGAATCATTGACTTCAATAA+AGG | 0.321302 | 1.3:+55755522 | MS.gene07512:CDS |
| TTTCCACAAGTCCAGTTTCT+TGG | 0.325981 | 1.3:-55757075 | None:intergenic |
| ATGCAGTCCATCCAATAAAA+AGG | 0.328639 | 1.3:-55754707 | None:intergenic |
| GGTGAATTAGCACTTGCATT+TGG | 0.331811 | 1.3:+55753236 | MS.gene07512:CDS |
| TTAATTTCAGCTTCAGAAAC+AGG | 0.340496 | 1.3:-55757507 | None:intergenic |
| CTCTGCAGCAACCATGCTTC+AGG | 0.341873 | 1.3:-55755297 | None:intergenic |
| TTGGAAGAAGACCCTCAATA+TGG | 0.349829 | 1.3:+55756446 | MS.gene07512:CDS |
| AGCAACCATTACGGTGGTTT+AGG | 0.350370 | 1.3:+55757260 | MS.gene07512:CDS |
| GAATAGCGCTCTTCAATGTT+TGG | 0.351618 | 1.3:+55753006 | MS.gene07512:CDS |
| GAACTTCCCCATTCACAATC+TGG | 0.353781 | 1.3:+55757175 | MS.gene07512:CDS |
| AAAACCCAGTGCACATATAA+AGG | 0.354307 | 1.3:+55756739 | MS.gene07512:CDS |
| TGTTCTCTGGTGCAAAGTGC+CGG | 0.355262 | 1.3:-55756623 | None:intergenic |
| ATATAAAGGTCTTTGCTGAT+TGG | 0.366153 | 1.3:+55756753 | MS.gene07512:CDS |
| GTCTGTGTTCCTTGCATTGA+GGG | 0.381184 | 1.3:-55757046 | None:intergenic |
| AAGTTCATCACTGACTACTA+TGG | 0.386122 | 1.3:+55752907 | MS.gene07512:CDS |
| ACAAAGAAATAGCTTCTTGC+CGG | 0.386336 | 1.3:-55756862 | None:intergenic |
| CAGACAAGCTACCAAGAAAC+TGG | 0.387149 | 1.3:+55757064 | MS.gene07512:CDS |
| TGGTAATGATAAGTACATAA+AGG | 0.388653 | 1.3:-55755188 | None:intergenic |
| GGTGGAGAGAGGAAGATCTT+TGG | 0.388726 | 1.3:+55756404 | MS.gene07512:CDS |
| AGATCATCTGTATCAATTGC+AGG | 0.391184 | 1.3:+55752818 | MS.gene07512:CDS |
| TGACGTGACTGTCATCAAAA+TGG | 0.395919 | 1.3:-55757482 | None:intergenic |
| TATCACAGATGCCTTGTCAA+TGG | 0.404625 | 1.3:-55756717 | None:intergenic |
| TGTTGCACCACGTGCGTTCA+AGG | 0.406091 | 1.3:+55753298 | MS.gene07512:CDS |
| AGACAGTAATTGTCATTGTC+CGG | 0.406135 | 1.3:-55755228 | None:intergenic |
| CAGAGATCTTTGCCAAGCAT+TGG | 0.409945 | 1.3:+55755315 | MS.gene07512:CDS |
| GTGCAAAGTGCCGGGTTCCT+CGG | 0.410838 | 1.3:-55756614 | None:intergenic |
| AGAAATATTGCATCGACATC+TGG | 0.412333 | 1.3:+55755600 | MS.gene07512:CDS |
| TCTCATGAAGGGAAGGAAAC+TGG | 0.414310 | 1.3:+55756536 | MS.gene07512:CDS |
| CACTGAATTGTGGAGCAAAT+CGG | 0.419702 | 1.3:-55753331 | None:intergenic |
| AATGGTTGCTGATTGCATAA+AGG | 0.420321 | 1.3:-55757247 | None:intergenic |
| ATCACAGATGCCTTGTCAAT+GGG | 0.425512 | 1.3:-55756716 | None:intergenic |
| GAGTCCTTCATTTCAATGTA+AGG | 0.429050 | 1.3:-55754757 | None:intergenic |
| TTTAGCAGGACTGCAGAACT+TGG | 0.431003 | 1.3:+55752967 | MS.gene07512:CDS |
| GATGATCTTGGAGGTTCTAA+TGG | 0.431147 | 1.3:-55752803 | None:intergenic |
| GGATGTCCCCTCTTGTTCTC+TGG | 0.432883 | 1.3:-55756636 | None:intergenic |
| GTTCTCTGGTGCAAAGTGCC+GGG | 0.438834 | 1.3:-55756622 | None:intergenic |
| AATGGTCACTCAAGTGGGTC+TGG | 0.439704 | 1.3:+55752857 | MS.gene07512:CDS |
| GGGACTTGTTGAGGAAACTT+TGG | 0.440723 | 1.3:+55753258 | MS.gene07512:CDS |
| GGTAATGATAAGTACATAAA+GGG | 0.444185 | 1.3:-55755187 | None:intergenic |
| ATCAACATGGAGAATCCTTT+AGG | 0.444926 | 1.3:+55753079 | MS.gene07512:CDS |
| CAATCTTACCACATGTCATC+TGG | 0.451523 | 1.3:-55756926 | None:intergenic |
| ACTGAATTGTGGAGCAAATC+GGG | 0.454165 | 1.3:-55753330 | None:intergenic |
| AAGGAAACTGGTTTCATCTC+AGG | 0.457552 | 1.3:+55756548 | MS.gene07512:CDS |
| GCAATTGATACAGATGATCT+TGG | 0.458422 | 1.3:-55752815 | None:intergenic |
| AGAGATCTTTGCCAAGCATT+GGG | 0.458789 | 1.3:+55755316 | MS.gene07512:CDS |
| ATCTGGTCCTAGAGGTTCTT+CGG | 0.459925 | 1.3:-55756909 | None:intergenic |
| GGTCAAATCCAGATTGTGAA+TGG | 0.461365 | 1.3:-55757183 | None:intergenic |
| GGTGAAAGAGGTGGTTTAGC+AGG | 0.462978 | 1.3:+55752953 | MS.gene07512:CDS |
| TCAATGTTGGCTCCATATTG+AGG | 0.465522 | 1.3:-55756458 | None:intergenic |
| GTCAAATCCAGATTGTGAAT+GGG | 0.468661 | 1.3:-55757182 | None:intergenic |
| CTTCGTTAGTTAAAACAAGT+TGG | 0.468962 | 1.3:-55756676 | None:intergenic |
| GATAAATATGACGTCTATAG+TGG | 0.470173 | 1.3:+55752932 | MS.gene07512:CDS |
| AAAGACCTTTATATGTGCAC+TGG | 0.472356 | 1.3:-55756744 | None:intergenic |
| TATGCAATCAGCAACCATTA+CGG | 0.474161 | 1.3:+55757251 | MS.gene07512:CDS |
| TAAAGGTTATACACATAGGA+TGG | 0.475468 | 1.3:-55757230 | None:intergenic |
| CAATGTTGGCTCCATATTGA+GGG | 0.480052 | 1.3:-55756457 | None:intergenic |
| GAAGATCTTTGGAACTCCCT+TGG | 0.482950 | 1.3:+55756415 | MS.gene07512:CDS |
| TATATGATGCAAGCTATTTG+AGG | 0.490281 | 1.3:+55756795 | MS.gene07512:CDS |
| TGAGGAAACTTTGGTCCTCT+GGG | 0.491053 | 1.3:+55753267 | MS.gene07512:CDS |
| TGTCTGTGTTCCTTGCATTG+AGG | 0.491807 | 1.3:-55757047 | None:intergenic |
| AGCATGCAGTGCCCAATGCT+TGG | 0.492001 | 1.3:-55755327 | None:intergenic |
| TTGCATTTGGGGACTTGTTG+AGG | 0.494177 | 1.3:+55753249 | MS.gene07512:CDS |
| CATTACGGTGGTTTAGGTGG+TGG | 0.494345 | 1.3:+55757266 | MS.gene07512:CDS |
| TTAGCAGGACTGCAGAACTT+GGG | 0.500451 | 1.3:+55752968 | MS.gene07512:CDS |
| AAAGCCTTACATTGAAATGA+AGG | 0.501423 | 1.3:+55754753 | MS.gene07512:CDS |
| CACTTCCTTCCACTGTCACC+CGG | 0.503998 | 1.3:+55755209 | MS.gene07512:CDS |
| CTCGGATGGTAGGCCGGATG+AGG | 0.505210 | 1.3:+55754777 | MS.gene07512:CDS |
| ATATGATGCAAGCTATTTGA+GGG | 0.506090 | 1.3:+55756796 | MS.gene07512:CDS |
| ATTGAAGTCAATGATTCCAA+TGG | 0.513982 | 1.3:-55755517 | None:intergenic |
| ACGTGCGTTCAAGGGAAAGC+TGG | 0.515230 | 1.3:+55753307 | MS.gene07512:CDS |
| CAAAGAAATAGCTTCTTGCC+GGG | 0.515685 | 1.3:-55756861 | None:intergenic |
| GTCCATACACGCATTCCTAA+AGG | 0.518820 | 1.3:-55753094 | None:intergenic |
| AATGGGAAATGAATTAGCAT+TGG | 0.527118 | 1.3:+55752778 | None:intergenic |
| AACTAAGTCTCATGAAGGGA+AGG | 0.531234 | 1.3:+55756529 | MS.gene07512:CDS |
| ATTGATTGTTGATGAATGCC+AGG | 0.532873 | 1.3:+55754846 | MS.gene07512:CDS |
| GAAGGACTCGGATGGTAGGC+CGG | 0.535738 | 1.3:+55754771 | MS.gene07512:CDS |
| GACATATGTACATAGAATGT+TGG | 0.539698 | 1.3:+55756481 | MS.gene07512:CDS |
| ATTGTCCGGGTGACAGTGGA+AGG | 0.540739 | 1.3:-55755214 | None:intergenic |
| AACTAACTTGAGAATCATGC+TGG | 0.546603 | 1.3:-55753361 | None:intergenic |
| AGCTTTCCCTTGAACGCACG+TGG | 0.549334 | 1.3:-55753305 | None:intergenic |
| AAGTATGTGAAAAGTAAAGA+TGG | 0.549335 | 1.3:+55757206 | MS.gene07512:CDS |
| GACGTCTATAGTGGTGAAAG+AGG | 0.550637 | 1.3:+55752941 | MS.gene07512:CDS |
| GACAGTAATTGTCATTGTCC+GGG | 0.551707 | 1.3:-55755227 | None:intergenic |
| AAGAGCGCTATTCATAAAGC+AGG | 0.553621 | 1.3:-55752996 | None:intergenic |
| TCTTCAACTAAGTCTCATGA+AGG | 0.553689 | 1.3:+55756524 | MS.gene07512:CDS |
| TTGTCTAATGGTCACTCAAG+TGG | 0.555942 | 1.3:+55752851 | MS.gene07512:CDS |
| TCATTTGCGACTTCCTCATC+CGG | 0.556059 | 1.3:-55754790 | None:intergenic |
| TGTTCACTGAACAGTGGGAA+GGG | 0.557069 | 1.3:+55756383 | MS.gene07512:intron |
| TGAATTAGCACTTGCATTTG+GGG | 0.557302 | 1.3:+55753238 | MS.gene07512:CDS |
| TTCAGGACAGTCACAGTGTA+CGG | 0.560190 | 1.3:-55755280 | None:intergenic |
| CACCACCTAAACCACCGTAA+TGG | 0.561137 | 1.3:-55757265 | None:intergenic |
| TCGTTATCTAGATAATCCAT+TGG | 0.561503 | 1.3:+55755501 | MS.gene07512:CDS |
| ATTACGGTGGTTTAGGTGGT+GGG | 0.561699 | 1.3:+55757267 | MS.gene07512:CDS |
| ATCGACTCAAGAGTGGAGCC+AGG | 0.567147 | 1.3:+55755566 | MS.gene07512:CDS |
| GATCATCTGTATCAATTGCA+GGG | 0.567157 | 1.3:+55752819 | MS.gene07512:CDS |
| TGTCTAATGGTCACTCAAGT+GGG | 0.570423 | 1.3:+55752852 | MS.gene07512:CDS |
| AAAGGATGAAGAACATATTG+TGG | 0.573464 | 1.3:+55755540 | MS.gene07512:CDS |
| AAGACCTTTATATGTGCACT+GGG | 0.573883 | 1.3:-55756743 | None:intergenic |
| GAACAAGAGGGGACATCCTG+TGG | 0.574752 | 1.3:+55756641 | MS.gene07512:CDS |
| TAGCAGGACTGCAGAACTTG+GGG | 0.576248 | 1.3:+55752969 | MS.gene07512:CDS |
| AGGAAGTCGCAAATGAGTGT+TGG | 0.577729 | 1.3:+55754797 | MS.gene07512:CDS |
| GTTGCACCACGTGCGTTCAA+GGG | 0.578428 | 1.3:+55753299 | MS.gene07512:CDS |
| ATTGATACAGATGATCTTGG+AGG | 0.579531 | 1.3:-55752812 | None:intergenic |
| CGATTTGCTCCACAATTCAG+TGG | 0.583237 | 1.3:+55753332 | MS.gene07512:CDS |
| ATGTACATATGTCTCAATGT+TGG | 0.584427 | 1.3:-55756471 | None:intergenic |
| AACCATTACGGTGGTTTAGG+TGG | 0.584463 | 1.3:+55757263 | MS.gene07512:CDS |
| TTACATTGAAATGAAGGACT+CGG | 0.585855 | 1.3:+55754759 | MS.gene07512:CDS |
| TAGCTGTGAGCCCATTGACA+AGG | 0.586420 | 1.3:+55756706 | MS.gene07512:CDS |
| TGTCATTGTCCGGGTGACAG+TGG | 0.589052 | 1.3:-55755218 | None:intergenic |
| ACTGTGACTGTCCTGAAGCA+TGG | 0.592033 | 1.3:+55755286 | MS.gene07512:CDS |
| ATTCAGCAAGTGGTGGAGTG+TGG | 0.594255 | 1.3:-55753030 | None:intergenic |
| TTGGAAAGATGACTCTCCAC+AGG | 0.597434 | 1.3:-55756657 | None:intergenic |
| TAGGTACTGCCCTCAATGCA+AGG | 0.598022 | 1.3:+55757037 | MS.gene07512:intron |
| GGCTCCACTCTTGAGTCGAT+AGG | 0.599098 | 1.3:-55755563 | None:intergenic |
| ACAGTCACAGTGTACGGCAT+GGG | 0.599364 | 1.3:-55755274 | None:intergenic |
| AAATGAAGGACTCGGATGGT+AGG | 0.599838 | 1.3:+55754767 | MS.gene07512:CDS |
| TTCTTCCAAATAAGTAACCA+AGG | 0.600475 | 1.3:-55756432 | None:intergenic |
| CTACCAAGAAACTGGACTTG+TGG | 0.605316 | 1.3:+55757072 | MS.gene07512:CDS |
| ACTTTGCACCAGAGAACAAG+AGG | 0.606165 | 1.3:+55756628 | MS.gene07512:CDS |
| GCATTACACTGCATATGCTA+AGG | 0.606988 | 1.3:+55757289 | MS.gene07512:CDS |
| AGTTGATTGATGATAATAAG+TGG | 0.607365 | 1.3:+55757457 | MS.gene07512:intron |
| TCACAGTGAACCGAGGAACC+CGG | 0.607659 | 1.3:+55756604 | MS.gene07512:CDS |
| AAAGGTTATACACATAGGAT+GGG | 0.610075 | 1.3:-55757229 | None:intergenic |
| ATGTTCACTGAACAGTGGGA+AGG | 0.611843 | 1.3:+55756382 | MS.gene07512:intron |
| CGGGTGACAGTGGAAGGAAG+TGG | 0.612301 | 1.3:-55755208 | None:intergenic |
| GACAGTCACAGTGTACGGCA+TGG | 0.613993 | 1.3:-55755275 | None:intergenic |
| TGCATAAAGGTTATACACAT+AGG | 0.622320 | 1.3:-55757234 | None:intergenic |
| TCAAATCCAGATTGTGAATG+GGG | 0.623330 | 1.3:-55757181 | None:intergenic |
| GTGGCCTATCGACTCAAGAG+TGG | 0.623354 | 1.3:+55755559 | MS.gene07512:CDS |
| ACACTAGTTTGTCCTGAATG+TGG | 0.624818 | 1.3:+55755142 | MS.gene07512:CDS |
| ACAGTGGGAAGGGTGGAGAG+AGG | 0.626561 | 1.3:+55756393 | MS.gene07512:intron |
| CACATGTCATCTGGTCCTAG+AGG | 0.629509 | 1.3:-55756917 | None:intergenic |
| CTTCAACTAAGTCTCATGAA+GGG | 0.631995 | 1.3:+55756525 | MS.gene07512:CDS |
| ATCATCTGTATCAATTGCAG+GGG | 0.637469 | 1.3:+55752820 | MS.gene07512:CDS |
| TGGTTATAACCACTGAATTG+TGG | 0.641543 | 1.3:-55753341 | None:intergenic |
| GAAACTGGTTTCATCTCAGG+TGG | 0.641699 | 1.3:+55756551 | MS.gene07512:CDS |
| TCACTGAACAGTGGGAAGGG+TGG | 0.648017 | 1.3:+55756386 | MS.gene07512:intron |
| TCTTCCAAATAAGTAACCAA+GGG | 0.649627 | 1.3:-55756431 | None:intergenic |
| CTCTAGGACCAGATGACATG+TGG | 0.653845 | 1.3:+55756918 | MS.gene07512:CDS |
| GTCTATAGTGGTGAAAGAGG+TGG | 0.657063 | 1.3:+55752944 | MS.gene07512:CDS |
| ATTGAAATGAAGGACTCGGA+TGG | 0.658538 | 1.3:+55754763 | MS.gene07512:CDS |
| GCAATCAGCAACCATTACGG+TGG | 0.659658 | 1.3:+55757254 | MS.gene07512:CDS |
| TGCAACAGCAGTTCGCCCAG+AGG | 0.677930 | 1.3:-55753282 | None:intergenic |
| CTAATTCTCACAGTGAACCG+AGG | 0.686154 | 1.3:+55756597 | MS.gene07512:CDS |
| TTCTTGACCGAAGAACCTCT+AGG | 0.686595 | 1.3:+55756902 | MS.gene07512:CDS |
| CTTTGCACCAGAGAACAAGA+GGG | 0.690692 | 1.3:+55756629 | MS.gene07512:CDS |
| GAGTGACCATTAGACAAGGT+AGG | 0.713316 | 1.3:-55752845 | None:intergenic |
| TTACAGCGATGAGATCAACA+TGG | 0.715649 | 1.3:+55753066 | MS.gene07512:CDS |
| TCATCTGTATCAATTGCAGG+GGG | 0.722106 | 1.3:+55752821 | MS.gene07512:CDS |
| GTGAATGGGGAAGTTCACAA+AGG | 0.723784 | 1.3:-55757168 | None:intergenic |
| TTTGCACCAGAGAACAAGAG+GGG | 0.735618 | 1.3:+55756630 | MS.gene07512:CDS |
| ACTTGAGTGACCATTAGACA+AGG | 0.740534 | 1.3:-55752849 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTACAATTTTTATTTT+TGG | + | chr1.3:55753390-55753409 | MS.gene07512:intron | 10.0% |
| !! | AGAATTATTTCATATTTCAT+TGG | - | chr1.3:55753679-55753698 | None:intergenic | 15.0% |
| !! | TATACATCTTAGTTTATTAA+AGG | + | chr1.3:55754453-55754472 | MS.gene07512:intron | 15.0% |
| !! | TTTATATTAAGTTACAGTTT+GGG | + | chr1.3:55753653-55753672 | MS.gene07512:intron | 15.0% |
| !!! | AATCATATGATTTTGATTTT+TGG | + | chr1.3:55753499-55753518 | MS.gene07512:intron | 15.0% |
| !!! | AGATCAATGAATAAATTTTT+TGG | - | chr1.3:55754375-55754394 | None:intergenic | 15.0% |
| !!! | ATTTTAACCTTATTTTAGTT+GGG | + | chr1.3:55753930-55753949 | MS.gene07512:intron | 15.0% |
| !!! | GATCAATGAATAAATTTTTT+GGG | - | chr1.3:55754374-55754393 | None:intergenic | 15.0% |
| !!! | TATTTTAACCTTATTTTAGT+TGG | + | chr1.3:55753929-55753948 | MS.gene07512:intron | 15.0% |
| !!! | TTTTATATTAAGTTACAGTT+TGG | + | chr1.3:55753652-55753671 | MS.gene07512:intron | 15.0% |
| !! | AGCAATTCTTTGTTAAAAAT+TGG | + | chr1.3:55753814-55753833 | MS.gene07512:intron | 20.0% |
| !! | ATCAGTGAAATATAAATAAC+TGG | - | chr1.3:55756283-55756302 | None:intergenic | 20.0% |
| !! | ATGTATACGTAATACAAATT+AGG | - | chr1.3:55754440-55754459 | None:intergenic | 20.0% |
| !! | CAAATTACAAAATCTAGATT+TGG | - | chr1.3:55757377-55757396 | None:intergenic | 20.0% |
| !! | TCAATCATATGTTATGAATA+AGG | + | chr1.3:55753609-55753628 | MS.gene07512:intron | 20.0% |
| !! | TGTTATATTATATCAAATGC+AGG | - | chr1.3:55754507-55754526 | None:intergenic | 20.0% |
| !!! | AGTAGTGAGTTATTTTTTTT+AGG | + | chr1.3:55754675-55754694 | MS.gene07512:intron | 20.0% |
| !!! | CCATAATGTTTTATCATTAT+GGG | - | chr1.3:55756013-55756032 | None:intergenic | 20.0% |
| !!! | TATTTCTAATTTTGTTTTCC+TGG | - | chr1.3:55755587-55755606 | None:intergenic | 20.0% |
| ! | AAAATAAAAGCCAACAGAAA+TGG | - | chr1.3:55753119-55753138 | None:intergenic | 25.0% |
| ! | AAATTAGGAGATTACAATCA+TGG | + | chr1.3:55754138-55754157 | MS.gene07512:intron | 25.0% |
| ! | AAGTATGTGAAAAGTAAAGA+TGG | + | chr1.3:55757206-55757225 | MS.gene07512:CDS | 25.0% |
| ! | AATAGCTTTCAGAAATTAGT+AGG | - | chr1.3:55754628-55754647 | None:intergenic | 25.0% |
| ! | AATCAATCAGACATTGATAA+TGG | + | chr1.3:55755919-55755938 | MS.gene07512:intron | 25.0% |
| ! | AATTAGGAGATTACAATCAT+GGG | + | chr1.3:55754139-55754158 | MS.gene07512:intron | 25.0% |
| ! | ATCTTAGTTTATTAAAGGAC+TGG | + | chr1.3:55754458-55754477 | MS.gene07512:intron | 25.0% |
| ! | CAAATTAGGATTAACTCAAA+TGG | - | chr1.3:55754426-55754445 | None:intergenic | 25.0% |
| ! | CCCATAATGATAAAACATTA+TGG | + | chr1.3:55756010-55756029 | MS.gene07512:intron | 25.0% |
| ! | GAAATATAAATAACTGGTTG+TGG | - | chr1.3:55756277-55756296 | None:intergenic | 25.0% |
| ! | GAATTGATAGAAATCAATGA+AGG | - | chr1.3:55754992-55755011 | None:intergenic | 25.0% |
| ! | GGTAATGATAAGTACATAAA+GGG | - | chr1.3:55755190-55755209 | None:intergenic | 25.0% |
| ! | GTTGTAGTTGTAATAAACTT+TGG | + | chr1.3:55755790-55755809 | MS.gene07512:intron | 25.0% |
| ! | TAATATAACAAGTTTGCGTT+AGG | + | chr1.3:55754517-55754536 | MS.gene07512:intron | 25.0% |
| ! | TTTCTTGAATAAAATGCTCA+GGG | + | chr1.3:55755106-55755125 | MS.gene07512:intron | 25.0% |
| !! | AACCTTATGTTATTTGTTCT+GGG | + | chr1.3:55757433-55757452 | MS.gene07512:intron | 25.0% |
| !! | AATTTAAAACAAAAACCGCA+TGG | - | chr1.3:55754123-55754142 | None:intergenic | 25.0% |
| !! | AGTTGATTGATGATAATAAG+TGG | + | chr1.3:55757457-55757476 | MS.gene07512:intron | 25.0% |
| !! | ATTACTGTCTTTTATTCTGA+TGG | + | chr1.3:55755241-55755260 | MS.gene07512:CDS | 25.0% |
| !! | GCCATAATGTTTTATCATTA+TGG | - | chr1.3:55756014-55756033 | None:intergenic | 25.0% |
| !! | TAACCTTATGTTATTTGTTC+TGG | + | chr1.3:55757432-55757451 | MS.gene07512:intron | 25.0% |
| !! | TATATTTCACTGATTGTACA+CGG | + | chr1.3:55756289-55756308 | MS.gene07512:intron | 25.0% |
| !! | TGGTAATGATAAGTACATAA+AGG | - | chr1.3:55755191-55755210 | None:intergenic | 25.0% |
| !! | TTACTGTCTTTTATTCTGAT+GGG | + | chr1.3:55755242-55755261 | MS.gene07512:CDS | 25.0% |
| !! | TTTTCTTGAATAAAATGCTC+AGG | + | chr1.3:55755105-55755124 | MS.gene07512:intron | 25.0% |
| !!! | AAAGGATCATTCATTTTTCA+GGG | + | chr1.3:55753894-55753913 | MS.gene07512:intron | 25.0% |
| !!! | ATCTTTACTTTTCACATACT+TGG | - | chr1.3:55757207-55757226 | None:intergenic | 25.0% |
| !!! | ATGTTAACTATTGTTGATTC+TGG | + | chr1.3:55754061-55754080 | MS.gene07512:intron | 25.0% |
| !!! | TAAAGGATCATTCATTTTTC+AGG | + | chr1.3:55753893-55753912 | MS.gene07512:intron | 25.0% |
| !!! | TATTTCTTTGTTTTCATGCT+TGG | + | chr1.3:55756874-55756893 | MS.gene07512:CDS | 25.0% |
| !!! | TCTGGTTTTAATTTCTATCA+GGG | + | chr1.3:55752875-55752894 | MS.gene07512:CDS | 25.0% |
| !!! | TGCGGTTTTTGTTTTAAATT+AGG | + | chr1.3:55754123-55754142 | MS.gene07512:intron | 25.0% |
| AAAGCCTTACATTGAAATGA+AGG | + | chr1.3:55754753-55754772 | MS.gene07512:CDS | 30.0% | |
| AAAGGATGAAGAACATATTG+TGG | + | chr1.3:55755540-55755559 | MS.gene07512:CDS | 30.0% | |
| AAAGGTTATACACATAGGAT+GGG | - | chr1.3:55757232-55757251 | None:intergenic | 30.0% | |
| AACAAAAATCAATGCGTACA+AGG | - | chr1.3:55756988-55757007 | None:intergenic | 30.0% | |
| AAGTGAAAAACCAAAATCTC+TGG | - | chr1.3:55757104-55757123 | None:intergenic | 30.0% | |
| AATGAAGGTTTATTGAGATG+GGG | - | chr1.3:55754977-55754996 | None:intergenic | 30.0% | |
| AGAAAAGTTAGATCTACTCT+TGG | + | chr1.3:55755398-55755417 | MS.gene07512:intron | 30.0% | |
| AGTGACATTACAGTGAATAT+GGG | + | chr1.3:55755733-55755752 | MS.gene07512:intron | 30.0% | |
| ATATAAAGGTCTTTGCTGAT+TGG | + | chr1.3:55756753-55756772 | MS.gene07512:CDS | 30.0% | |
| ATATGATGCAAGCTATTTGA+GGG | + | chr1.3:55756796-55756815 | MS.gene07512:CDS | 30.0% | |
| ATGTACATATGTCTCAATGT+TGG | - | chr1.3:55756474-55756493 | None:intergenic | 30.0% | |
| ATGTTATGAAAGAAACCAGA+TGG | - | chr1.3:55754043-55754062 | None:intergenic | 30.0% | |
| ATTGAAGTCAATGATTCCAA+TGG | - | chr1.3:55755520-55755539 | None:intergenic | 30.0% | |
| ATTTATTCCCATTTGTACTC+TGG | - | chr1.3:55755902-55755921 | None:intergenic | 30.0% | |
| CAAACAATCAGAAAACTGAT+GGG | - | chr1.3:55756113-55756132 | None:intergenic | 30.0% | |
| CAATGAAGGTTTATTGAGAT+GGG | - | chr1.3:55754978-55754997 | None:intergenic | 30.0% | |
| CTTCGTTAGTTAAAACAAGT+TGG | - | chr1.3:55756679-55756698 | None:intergenic | 30.0% | |
| CTTTCAGAAATTAGTAGGAA+AGG | - | chr1.3:55754623-55754642 | None:intergenic | 30.0% | |
| GACATATGTACATAGAATGT+TGG | + | chr1.3:55756481-55756500 | MS.gene07512:CDS | 30.0% | |
| GATAAATATGACGTCTATAG+TGG | + | chr1.3:55752932-55752951 | MS.gene07512:CDS | 30.0% | |
| TAAAGGTTATACACATAGGA+TGG | - | chr1.3:55757233-55757252 | None:intergenic | 30.0% | |
| TAAGATATTGTGTACCACAA+TGG | + | chr1.3:55753162-55753181 | MS.gene07512:intron | 30.0% | |
| TACTTTAATGTCTCTAACAC+TGG | + | chr1.3:55756335-55756354 | MS.gene07512:intron | 30.0% | |
| TAGTTCTTAGAGCAGTAAAA+AGG | - | chr1.3:55754329-55754348 | None:intergenic | 30.0% | |
| TATATGATGCAAGCTATTTG+AGG | + | chr1.3:55756795-55756814 | MS.gene07512:CDS | 30.0% | |
| TATTAAAGGACTGGAGAATT+GGG | + | chr1.3:55754467-55754486 | MS.gene07512:intron | 30.0% | |
| TCAATGAAGGTTTATTGAGA+TGG | - | chr1.3:55754979-55754998 | None:intergenic | 30.0% | |
| TCGTTATCTAGATAATCCAT+TGG | + | chr1.3:55755501-55755520 | MS.gene07512:CDS | 30.0% | |
| TCTAAGAAAAATTCAGCAAG+TGG | - | chr1.3:55753043-55753062 | None:intergenic | 30.0% | |
| TCTAAGAACTAAAATGGTAG+CGG | + | chr1.3:55754338-55754357 | MS.gene07512:intron | 30.0% | |
| TCTTCCAAATAAGTAACCAA+GGG | - | chr1.3:55756434-55756453 | None:intergenic | 30.0% | |
| TGCATAAAGGTTATACACAT+AGG | - | chr1.3:55757237-55757256 | None:intergenic | 30.0% | |
| TGTTATGAAAGAAACCAGAT+GGG | - | chr1.3:55754042-55754061 | None:intergenic | 30.0% | |
| TTAATTTCAGCTTCAGAAAC+AGG | - | chr1.3:55757510-55757529 | None:intergenic | 30.0% | |
| TTACATTGAAATGAAGGACT+CGG | + | chr1.3:55754759-55754778 | MS.gene07512:CDS | 30.0% | |
| TTATTAAAGGACTGGAGAAT+TGG | + | chr1.3:55754466-55754485 | MS.gene07512:intron | 30.0% | |
| TTCTTCCAAATAAGTAACCA+AGG | - | chr1.3:55756435-55756454 | None:intergenic | 30.0% | |
| ! | ATAGACATTTTATACCCATC+TGG | + | chr1.3:55754025-55754044 | MS.gene07512:intron | 30.0% |
| ! | ATTGAAATTTTGCCACATTC+AGG | - | chr1.3:55755157-55755176 | None:intergenic | 30.0% |
| ! | GAAGAATGTGCTTTTCTTAA+AGG | - | chr1.3:55756509-55756528 | None:intergenic | 30.0% |
| ! | TAACAGGAAGTTTTTGTCAT+AGG | - | chr1.3:55753450-55753469 | None:intergenic | 30.0% |
| ! | TCATGGGTTTGTAATTTTGT+AGG | + | chr1.3:55754155-55754174 | MS.gene07512:intron | 30.0% |
| ! | TTAAGAGTATACACTGAAAG+AGG | - | chr1.3:55755639-55755658 | None:intergenic | 30.0% |
| ! | TTTTATGCTGTCTATATCTC+AGG | + | chr1.3:55755459-55755478 | MS.gene07512:intron | 30.0% |
| !! | GGAATCATTGACTTCAATAA+AGG | + | chr1.3:55755522-55755541 | MS.gene07512:CDS | 30.0% |
| !! | GTAGCAAGAGCTTTAAAAAT+TGG | + | chr1.3:55753966-55753985 | MS.gene07512:intron | 30.0% |
| !! | GTTTTCAAGAACTCATCTAA+AGG | + | chr1.3:55753876-55753895 | MS.gene07512:intron | 30.0% |
| !! | TAAGATTGCGTTGATGTTTT+TGG | + | chr1.3:55756941-55756960 | MS.gene07512:intron | 30.0% |
| !! | TACTGCTCTAAGAACTAAAA+TGG | + | chr1.3:55754332-55754351 | MS.gene07512:intron | 30.0% |
| !! | TGAGTGTTGGAAAAATCATA+TGG | + | chr1.3:55754810-55754829 | MS.gene07512:CDS | 30.0% |
| !! | TTGGTAATTTTCTCCACTAT+TGG | + | chr1.3:55756130-55756149 | MS.gene07512:intron | 30.0% |
| !!! | CAACTTGTTTTAACTAACGA+AGG | + | chr1.3:55756677-55756696 | MS.gene07512:CDS | 30.0% |
| !!! | GTCTGGTTTTAATTTCTATC+AGG | + | chr1.3:55752874-55752893 | MS.gene07512:CDS | 30.0% |
| !!! | GTGTTATTTTATCAGAGAGT+TGG | + | chr1.3:55757546-55757565 | MS.gene07512:CDS | 30.0% |
| !!! | TTGGCTTTTATTTTTTCTCC+TGG | + | chr1.3:55753125-55753144 | MS.gene07512:intron | 30.0% |
| AAAACCCAGTGCACATATAA+AGG | + | chr1.3:55756739-55756758 | MS.gene07512:CDS | 35.0% | |
| AAACACATCCATATCTCACT+AGG | - | chr1.3:55756064-55756083 | None:intergenic | 35.0% | |
| AAACTTCTATATGCTAAGCC+AGG | - | chr1.3:55756240-55756259 | None:intergenic | 35.0% | |
| AAAGACCTTTATATGTGCAC+TGG | - | chr1.3:55756747-55756766 | None:intergenic | 35.0% | |
| AACTAACTTGAGAATCATGC+TGG | - | chr1.3:55753364-55753383 | None:intergenic | 35.0% | |
| AACTCCCTTGGTTACTTATT+TGG | + | chr1.3:55756427-55756446 | MS.gene07512:CDS | 35.0% | |
| AACTCTTCCAGAGTACAAAT+GGG | + | chr1.3:55755892-55755911 | MS.gene07512:intron | 35.0% | |
| AAGAAAAATTCAGCAAGTGG+TGG | - | chr1.3:55753040-55753059 | None:intergenic | 35.0% | |
| AAGACCTTTATATGTGCACT+GGG | - | chr1.3:55756746-55756765 | None:intergenic | 35.0% | |
| AAGAGTTTATGTGTTCAGAC+AGG | - | chr1.3:55755957-55755976 | None:intergenic | 35.0% | |
| AATTACTATGTTGTGCCATG+CGG | + | chr1.3:55754105-55754124 | MS.gene07512:intron | 35.0% | |
| ACAAAGAAATAGCTTCTTGC+CGG | - | chr1.3:55756865-55756884 | None:intergenic | 35.0% | |
| ACTGGAACCCAACTAAAATA+AGG | - | chr1.3:55753940-55753959 | None:intergenic | 35.0% | |
| AGACAGTAATTGTCATTGTC+CGG | - | chr1.3:55755231-55755250 | None:intergenic | 35.0% | |
| AGATCATCTGTATCAATTGC+AGG | + | chr1.3:55752818-55752837 | MS.gene07512:CDS | 35.0% | |
| ATCAACATGGAGAATCCTTT+AGG | + | chr1.3:55753079-55753098 | MS.gene07512:CDS | 35.0% | |
| ATCATCTGTATCAATTGCAG+GGG | + | chr1.3:55752820-55752839 | MS.gene07512:CDS | 35.0% | |
| ATGCAGTCCATCCAATAAAA+AGG | - | chr1.3:55754710-55754729 | None:intergenic | 35.0% | |
| ATTGATACAGATGATCTTGG+AGG | - | chr1.3:55752815-55752834 | None:intergenic | 35.0% | |
| CATATAGGTACCAACTTGAA+TGG | - | chr1.3:55756187-55756206 | None:intergenic | 35.0% | |
| CCAAACAATCAGAAAACTGA+TGG | - | chr1.3:55756114-55756133 | None:intergenic | 35.0% | |
| CTGAACACATAAACTCTTCA+AGG | + | chr1.3:55755959-55755978 | MS.gene07512:intron | 35.0% | |
| CTTATCAATGGAAGATCAAC+TGG | - | chr1.3:55754922-55754941 | None:intergenic | 35.0% | |
| CTTCAACTAAGTCTCATGAA+GGG | + | chr1.3:55756525-55756544 | MS.gene07512:CDS | 35.0% | |
| GAGTCCTTCATTTCAATGTA+AGG | - | chr1.3:55754760-55754779 | None:intergenic | 35.0% | |
| GAGTGACATTACAGTGAATA+TGG | + | chr1.3:55755732-55755751 | MS.gene07512:intron | 35.0% | |
| GATCATCTGTATCAATTGCA+GGG | + | chr1.3:55752819-55752838 | MS.gene07512:CDS | 35.0% | |
| GATTCACTGTGAAAAAAACC+CGG | + | chr1.3:55756843-55756862 | MS.gene07512:CDS | 35.0% | |
| GCAATTGATACAGATGATCT+TGG | - | chr1.3:55752818-55752837 | None:intergenic | 35.0% | |
| GTACTTGAAATGACCAATAG+TGG | - | chr1.3:55756146-55756165 | None:intergenic | 35.0% | |
| GTCAAATCCAGATTGTGAAT+GGG | - | chr1.3:55757185-55757204 | None:intergenic | 35.0% | |
| GTGAATTAGCACTTGCATTT+GGG | + | chr1.3:55753237-55753256 | MS.gene07512:CDS | 35.0% | |
| GTTAAAAATTGGCTGCCAAA+AGG | + | chr1.3:55753825-55753844 | MS.gene07512:intron | 35.0% | |
| GTTGGAAAAATCATATGGCT+CGG | + | chr1.3:55754815-55754834 | MS.gene07512:CDS | 35.0% | |
| GTTGTGCAAACTATGCTATA+CGG | - | chr1.3:55756218-55756237 | None:intergenic | 35.0% | |
| TATACGGCTATACCACATAT+AGG | - | chr1.3:55756202-55756221 | None:intergenic | 35.0% | |
| TATGCAATCAGCAACCATTA+CGG | + | chr1.3:55757251-55757270 | MS.gene07512:CDS | 35.0% | |
| TATTCACTGTAATGTCACTC+AGG | - | chr1.3:55755732-55755751 | None:intergenic | 35.0% | |
| TCAAATCCAGATTGTGAATG+GGG | - | chr1.3:55757184-55757203 | None:intergenic | 35.0% | |
| TCTTCAACTAAGTCTCATGA+AGG | + | chr1.3:55756524-55756543 | MS.gene07512:CDS | 35.0% | |
| TGAAAATGCTAATGACCAAC+AGG | - | chr1.3:55753480-55753499 | None:intergenic | 35.0% | |
| TGAATTAGCACTTGCATTTG+GGG | + | chr1.3:55753238-55753257 | MS.gene07512:CDS | 35.0% | |
| TGCCCAGAACAAATAACATA+AGG | - | chr1.3:55757438-55757457 | None:intergenic | 35.0% | |
| TGGTTATAACCACTGAATTG+TGG | - | chr1.3:55753344-55753363 | None:intergenic | 35.0% | |
| TTCTATCAATTCCTGAGCTT+GGG | + | chr1.3:55755000-55755019 | MS.gene07512:intron | 35.0% | |
| TTTCTATCAATTCCTGAGCT+TGG | + | chr1.3:55754999-55755018 | MS.gene07512:intron | 35.0% | |
| ! | AAGTCACAGATAGAACCTTT+TGG | - | chr1.3:55753843-55753862 | None:intergenic | 35.0% |
| ! | AAGTTCATCACTGACTACTA+TGG | + | chr1.3:55752907-55752926 | MS.gene07512:CDS | 35.0% |
| ! | AATGGTTGCTGATTGCATAA+AGG | - | chr1.3:55757250-55757269 | None:intergenic | 35.0% |
| ! | AGAAATATTGCATCGACATC+TGG | + | chr1.3:55755600-55755619 | MS.gene07512:CDS | 35.0% |
| ! | ATATTTTCCAAGTCCGACAT+TGG | - | chr1.3:55754543-55754562 | None:intergenic | 35.0% |
| ! | ATTGATTGTTGATGAATGCC+AGG | + | chr1.3:55754846-55754865 | MS.gene07512:CDS | 35.0% |
| ! | CAAGTACTACTGAATTTTGC+AGG | + | chr1.3:55756159-55756178 | MS.gene07512:intron | 35.0% |
| ! | CCATCAGTTTTCTGATTGTT+TGG | + | chr1.3:55756111-55756130 | MS.gene07512:intron | 35.0% |
| ! | GACTGGAGACTGTTATATTT+TGG | + | chr1.3:55755844-55755863 | MS.gene07512:intron | 35.0% |
| ! | GAGTTATGGTCTAGTGTTTT+GGG | - | chr1.3:55756091-55756110 | None:intergenic | 35.0% |
| ! | GATTTTTCATGTTCACTGTG+TGG | + | chr1.3:55757346-55757365 | MS.gene07512:intron | 35.0% |
| !! | AATCCAGTTTTGTGAACTTC+AGG | - | chr1.3:55756827-55756846 | None:intergenic | 35.0% |
| !! | CAATCAGACATTGATAATGG+TGG | + | chr1.3:55755922-55755941 | MS.gene07512:intron | 35.0% |
| !! | CATAGGTAATAAAAGCGCTA+GGG | - | chr1.3:55753433-55753452 | None:intergenic | 35.0% |
| !! | TCATAGGTAATAAAAGCGCT+AGG | - | chr1.3:55753434-55753453 | None:intergenic | 35.0% |
| !! | TTCAAGTTGGTACCTATATG+TGG | + | chr1.3:55756187-55756206 | MS.gene07512:intron | 35.0% |
| !! | TTGGCTTTTCTACATGACTT+TGG | + | chr1.3:55755417-55755436 | MS.gene07512:intron | 35.0% |
| !!! | ATTTTTTCTCCTGGTGTTCT+CGG | + | chr1.3:55753134-55753153 | MS.gene07512:intron | 35.0% |
| !!! | GGAATTGCTAGCCTTTTTAT+TGG | + | chr1.3:55754696-55754715 | MS.gene07512:intron | 35.0% |
| !!! | TGAAATGCTTTTTCTTGCAG+AGG | + | chr1.3:55755363-55755382 | MS.gene07512:CDS | 35.0% |
| !!! | TTCTTTGTTTTCATGCTTGG+AGG | + | chr1.3:55756877-55756896 | MS.gene07512:CDS | 35.0% |
| !!! | TTGCGTTGATGTTTTTGGAA+TGG | + | chr1.3:55756946-55756965 | MS.gene07512:intron | 35.0% |
| !!! | TTGCTAGCCTTTTTATTGGA+TGG | + | chr1.3:55754700-55754719 | MS.gene07512:CDS | 35.0% |
| AACTAAGTCTCATGAAGGGA+AGG | + | chr1.3:55756529-55756548 | MS.gene07512:CDS | 40.0% | |
| AACTCTAGTCAAAGCTTCAG+TGG | - | chr1.3:55755029-55755048 | None:intergenic | 40.0% | |
| ACTGAATTGTGGAGCAAATC+GGG | - | chr1.3:55753333-55753352 | None:intergenic | 40.0% | |
| ACTTGAGTGACCATTAGACA+AGG | - | chr1.3:55752852-55752871 | None:intergenic | 40.0% | |
| AGAGATCTTTGCCAAGCATT+GGG | + | chr1.3:55755316-55755335 | MS.gene07512:CDS | 40.0% | |
| AGATCACAACTGATGAACGT+CGG | - | chr1.3:55754236-55754255 | None:intergenic | 40.0% | |
| AGCTCTTGCTACTGTAAAAC+TGG | - | chr1.3:55753958-55753977 | None:intergenic | 40.0% | |
| AGTTTATGTGTTCAGACAGG+TGG | - | chr1.3:55755954-55755973 | None:intergenic | 40.0% | |
| ATCACAGATGCCTTGTCAAT+GGG | - | chr1.3:55756719-55756738 | None:intergenic | 40.0% | |
| ATTGAAATGAAGGACTCGGA+TGG | + | chr1.3:55754763-55754782 | MS.gene07512:CDS | 40.0% | |
| CAAAGAAATAGCTTCTTGCC+GGG | - | chr1.3:55756864-55756883 | None:intergenic | 40.0% | |
| CAACATTTCTCTGATCTGCA+GGG | + | chr1.3:55753215-55753234 | MS.gene07512:intron | 40.0% | |
| CAATCTTACCACATGTCATC+TGG | - | chr1.3:55756929-55756948 | None:intergenic | 40.0% | |
| CACAAAGCTCTGTTGAGTAA+TGG | + | chr1.3:55755670-55755689 | MS.gene07512:intron | 40.0% | |
| CACTGAATTGTGGAGCAAAT+CGG | - | chr1.3:55753334-55753353 | None:intergenic | 40.0% | |
| CAGAAAACTGATGGGAGTTA+TGG | - | chr1.3:55756105-55756124 | None:intergenic | 40.0% | |
| CCTACTTGAAAGCAATTGAC+TGG | + | chr1.3:55755827-55755846 | MS.gene07512:intron | 40.0% | |
| CCTTGAAAGTAAAGCCATTG+TGG | - | chr1.3:55753179-55753198 | None:intergenic | 40.0% | |
| CTCGAGTCTTGACAACTTTA+TGG | + | chr1.3:55754583-55754602 | MS.gene07512:intron | 40.0% | |
| CTTCATGTTCACTGAACAGT+GGG | + | chr1.3:55756378-55756397 | MS.gene07512:intron | 40.0% | |
| CTTCCTGAAGTTCACAAAAC+TGG | + | chr1.3:55756821-55756840 | MS.gene07512:CDS | 40.0% | |
| GAACTCTTCCAGAGTACAAA+TGG | + | chr1.3:55755891-55755910 | MS.gene07512:intron | 40.0% | |
| GAATAGCGCTCTTCAATGTT+TGG | + | chr1.3:55753006-55753025 | MS.gene07512:CDS | 40.0% | |
| GACAGTAATTGTCATTGTCC+GGG | - | chr1.3:55755230-55755249 | None:intergenic | 40.0% | |
| GCATTACACTGCATATGCTA+AGG | + | chr1.3:55757289-55757308 | MS.gene07512:CDS | 40.0% | |
| GGTCAAATCCAGATTGTGAA+TGG | - | chr1.3:55757186-55757205 | None:intergenic | 40.0% | |
| GGTGAATTAGCACTTGCATT+TGG | + | chr1.3:55753236-55753255 | MS.gene07512:CDS | 40.0% | |
| GTAGCTACTCAGCTTATCAA+TGG | - | chr1.3:55754934-55754953 | None:intergenic | 40.0% | |
| TATCACAGATGCCTTGTCAA+TGG | - | chr1.3:55756720-55756739 | None:intergenic | 40.0% | |
| TCAACATTTCTCTGATCTGC+AGG | + | chr1.3:55753214-55753233 | MS.gene07512:intron | 40.0% | |
| TCATCTGTATCAATTGCAGG+GGG | + | chr1.3:55752821-55752840 | MS.gene07512:CDS | 40.0% | |
| TCTTCATGTTCACTGAACAG+TGG | + | chr1.3:55756377-55756396 | MS.gene07512:intron | 40.0% | |
| TGACGTGACTGTCATCAAAA+TGG | - | chr1.3:55757485-55757504 | None:intergenic | 40.0% | |
| TGTCTAATGGTCACTCAAGT+GGG | + | chr1.3:55752852-55752871 | MS.gene07512:CDS | 40.0% | |
| TTACAGCGATGAGATCAACA+TGG | + | chr1.3:55753066-55753085 | MS.gene07512:CDS | 40.0% | |
| TTGGAAGAAGACCCTCAATA+TGG | + | chr1.3:55756446-55756465 | MS.gene07512:CDS | 40.0% | |
| TTGTCTAATGGTCACTCAAG+TGG | + | chr1.3:55752851-55752870 | MS.gene07512:CDS | 40.0% | |
| TTTCCACAAGTCCAGTTTCT+TGG | - | chr1.3:55757078-55757097 | None:intergenic | 40.0% | |
| TTTGCAGGTACCATTCAAGT+TGG | + | chr1.3:55756174-55756193 | MS.gene07512:intron | 40.0% | |
| ! | AAGGAAACTGGTTTCATCTC+AGG | + | chr1.3:55756548-55756567 | MS.gene07512:CDS | 40.0% |
| ! | ACACTAGTTTGTCCTGAATG+TGG | + | chr1.3:55755142-55755161 | MS.gene07512:CDS | 40.0% |
| ! | ATAGCATAGTTTGCACAACC+TGG | + | chr1.3:55756219-55756238 | MS.gene07512:intron | 40.0% |
| ! | ATCCTTTAGGAATGCGTGTA+TGG | + | chr1.3:55753092-55753111 | MS.gene07512:intron | 40.0% |
| ! | CCACAATGGCTTTACTTTCA+AGG | + | chr1.3:55753176-55753195 | MS.gene07512:intron | 40.0% |
| ! | CCAGTCAATTGCTTTCAAGT+AGG | - | chr1.3:55755830-55755849 | None:intergenic | 40.0% |
| ! | CTTTTCTGTAAGTACTCACC+TGG | - | chr1.3:55754867-55754886 | None:intergenic | 40.0% |
| ! | GATGATCTTGGAGGTTCTAA+TGG | - | chr1.3:55752806-55752825 | None:intergenic | 40.0% |
| ! | GGAGTTATGGTCTAGTGTTT+TGG | - | chr1.3:55756092-55756111 | None:intergenic | 40.0% |
| ! | GTCTTTTATTCTGATGGGAG+CGG | + | chr1.3:55755247-55755266 | MS.gene07512:CDS | 40.0% |
| ! | GTGGAAATTGCCAGAGATTT+TGG | + | chr1.3:55757091-55757110 | MS.gene07512:CDS | 40.0% |
| ! | TGTACTCTGGAAGAGTTCAA+TGG | - | chr1.3:55755889-55755908 | None:intergenic | 40.0% |
| !! | AAGAGCGCTATTCATAAAGC+AGG | - | chr1.3:55752999-55753018 | None:intergenic | 40.0% |
| !! | CAATGTTGGCTCCATATTGA+GGG | - | chr1.3:55756460-55756479 | None:intergenic | 40.0% |
| !! | TCAATGTTGGCTCCATATTG+AGG | - | chr1.3:55756461-55756480 | None:intergenic | 40.0% |
| AAATGAAGGACTCGGATGGT+AGG | + | chr1.3:55754767-55754786 | MS.gene07512:CDS | 45.0% | |
| AACCATTACGGTGGTTTAGG+TGG | + | chr1.3:55757263-55757282 | MS.gene07512:CDS | 45.0% | |
| ACATCCATATCTCACTAGGC+GGG | - | chr1.3:55756060-55756079 | None:intergenic | 45.0% | |
| ACTTTGCACCAGAGAACAAG+AGG | + | chr1.3:55756628-55756647 | MS.gene07512:CDS | 45.0% | |
| AGCAACCATTACGGTGGTTT+AGG | + | chr1.3:55757260-55757279 | MS.gene07512:CDS | 45.0% | |
| AGGAAGTCGCAAATGAGTGT+TGG | + | chr1.3:55754797-55754816 | MS.gene07512:CDS | 45.0% | |
| AGTTTGCGTTAGGCCAATGT+CGG | + | chr1.3:55754527-55754546 | MS.gene07512:intron | 45.0% | |
| ATCTGGTCCTAGAGGTTCTT+CGG | - | chr1.3:55756912-55756931 | None:intergenic | 45.0% | |
| ATGTTCACTGAACAGTGGGA+AGG | + | chr1.3:55756382-55756401 | MS.gene07512:intron | 45.0% | |
| ATTACGGTGGTTTAGGTGGT+GGG | + | chr1.3:55757267-55757286 | MS.gene07512:CDS | 45.0% | |
| CACATCCATATCTCACTAGG+CGG | - | chr1.3:55756061-55756080 | None:intergenic | 45.0% | |
| CAGACAAGCTACCAAGAAAC+TGG | + | chr1.3:55757064-55757083 | MS.gene07512:CDS | 45.0% | |
| CAGAGATCTTTGCCAAGCAT+TGG | + | chr1.3:55755315-55755334 | MS.gene07512:CDS | 45.0% | |
| CGTGTATGGACCATTTCTGT+TGG | + | chr1.3:55753106-55753125 | MS.gene07512:intron | 45.0% | |
| CTAATTCTCACAGTGAACCG+AGG | + | chr1.3:55756597-55756616 | MS.gene07512:CDS | 45.0% | |
| CTACCAAGAAACTGGACTTG+TGG | + | chr1.3:55757072-55757091 | MS.gene07512:CDS | 45.0% | |
| CTGGTTGTGGAATCGTTCTA+TGG | - | chr1.3:55756264-55756283 | None:intergenic | 45.0% | |
| CTTTGCACCAGAGAACAAGA+GGG | + | chr1.3:55756629-55756648 | MS.gene07512:CDS | 45.0% | |
| GAACTTCCCCATTCACAATC+TGG | + | chr1.3:55757175-55757194 | MS.gene07512:CDS | 45.0% | |
| GAAGTTGTCTGTTGCCAGTA+TGG | + | chr1.3:55754197-55754216 | MS.gene07512:intron | 45.0% | |
| GACGTCTATAGTGGTGAAAG+AGG | + | chr1.3:55752941-55752960 | MS.gene07512:CDS | 45.0% | |
| GAGTGACCATTAGACAAGGT+AGG | - | chr1.3:55752848-55752867 | None:intergenic | 45.0% | |
| GCCAGTATGGTATACCTGTA+TGG | + | chr1.3:55754210-55754229 | MS.gene07512:intron | 45.0% | |
| GCCATACAGGTATACCATAC+TGG | - | chr1.3:55754214-55754233 | None:intergenic | 45.0% | |
| GTCCATACACGCATTCCTAA+AGG | - | chr1.3:55753097-55753116 | None:intergenic | 45.0% | |
| GTCTATAGTGGTGAAAGAGG+TGG | + | chr1.3:55752944-55752963 | MS.gene07512:CDS | 45.0% | |
| GTCTGTGTTCCTTGCATTGA+GGG | - | chr1.3:55757049-55757068 | None:intergenic | 45.0% | |
| GTGAATGGGGAAGTTCACAA+AGG | - | chr1.3:55757171-55757190 | None:intergenic | 45.0% | |
| TCATTTGCGACTTCCTCATC+CGG | - | chr1.3:55754793-55754812 | None:intergenic | 45.0% | |
| TCTCATGAAGGGAAGGAAAC+TGG | + | chr1.3:55756536-55756555 | MS.gene07512:CDS | 45.0% | |
| TGAGGAAACTTTGGTCCTCT+GGG | + | chr1.3:55753267-55753286 | MS.gene07512:CDS | 45.0% | |
| TGTCTGTGTTCCTTGCATTG+AGG | - | chr1.3:55757050-55757069 | None:intergenic | 45.0% | |
| TGTTCACTGAACAGTGGGAA+GGG | + | chr1.3:55756383-55756402 | MS.gene07512:intron | 45.0% | |
| TTAGCAGGACTGCAGAACTT+GGG | + | chr1.3:55752968-55752987 | MS.gene07512:CDS | 45.0% | |
| TTCAGGACAGTCACAGTGTA+CGG | - | chr1.3:55755283-55755302 | None:intergenic | 45.0% | |
| TTCTTGACCGAAGAACCTCT+AGG | + | chr1.3:55756902-55756921 | MS.gene07512:CDS | 45.0% | |
| TTGAGGAAACTTTGGTCCTC+TGG | + | chr1.3:55753266-55753285 | MS.gene07512:CDS | 45.0% | |
| TTGGAAAGATGACTCTCCAC+AGG | - | chr1.3:55756660-55756679 | None:intergenic | 45.0% | |
| TTTAGCAGGACTGCAGAACT+TGG | + | chr1.3:55752967-55752986 | MS.gene07512:CDS | 45.0% | |
| TTTGCACCAGAGAACAAGAG+GGG | + | chr1.3:55756630-55756649 | MS.gene07512:CDS | 45.0% | |
| ! | CGATTTGCTCCACAATTCAG+TGG | + | chr1.3:55753332-55753351 | MS.gene07512:CDS | 45.0% |
| ! | GAAACTGGTTTCATCTCAGG+TGG | + | chr1.3:55756551-55756570 | MS.gene07512:CDS | 45.0% |
| !! | GAAGATCTTTGGAACTCCCT+TGG | + | chr1.3:55756415-55756434 | MS.gene07512:CDS | 45.0% |
| !! | GGGACTTGTTGAGGAAACTT+TGG | + | chr1.3:55753258-55753277 | MS.gene07512:CDS | 45.0% |
| !! | TTGCATTTGGGGACTTGTTG+AGG | + | chr1.3:55753249-55753268 | MS.gene07512:CDS | 45.0% |
| !!! | TATATATTTCATTTTTTAAA+TGG | + | chr1.3:55753772-55753791 | MS.gene07512:intron | 5.0% |
| !!! | TTCTTTTTAAAAAATTAATT+AGG | + | chr1.3:55757018-55757037 | MS.gene07512:intron | 5.0% |
| AATGGTCACTCAAGTGGGTC+TGG | + | chr1.3:55752857-55752876 | MS.gene07512:CDS | 50.0% | |
| ACAGTCACAGTGTACGGCAT+GGG | - | chr1.3:55755277-55755296 | None:intergenic | 50.0% | |
| ACTGTGACTGTCCTGAAGCA+TGG | + | chr1.3:55755286-55755305 | MS.gene07512:CDS | 50.0% | |
| CACATGTCATCTGGTCCTAG+AGG | - | chr1.3:55756920-55756939 | None:intergenic | 50.0% | |
| CACCACCTAAACCACCGTAA+TGG | - | chr1.3:55757268-55757287 | None:intergenic | 50.0% | |
| CATCCATATCTCACTAGGCG+GGG | - | chr1.3:55756059-55756078 | None:intergenic | 50.0% | |
| CATTACGGTGGTTTAGGTGG+TGG | + | chr1.3:55757266-55757285 | MS.gene07512:CDS | 50.0% | |
| CTTATGCATCCGAGAACACC+AGG | - | chr1.3:55753146-55753165 | None:intergenic | 50.0% | |
| GCAATCAGCAACCATTACGG+TGG | + | chr1.3:55757254-55757273 | MS.gene07512:CDS | 50.0% | |
| GGTGAAAGAGGTGGTTTAGC+AGG | + | chr1.3:55752953-55752972 | MS.gene07512:CDS | 50.0% | |
| GGTGGAGAGAGGAAGATCTT+TGG | + | chr1.3:55756404-55756423 | MS.gene07512:CDS | 50.0% | |
| TAGCAGGACTGCAGAACTTG+GGG | + | chr1.3:55752969-55752988 | MS.gene07512:CDS | 50.0% | |
| TAGCTGTGAGCCCATTGACA+AGG | + | chr1.3:55756706-55756725 | MS.gene07512:CDS | 50.0% | |
| TCCTGTTACACGATGCCTGT+TGG | + | chr1.3:55753462-55753481 | MS.gene07512:intron | 50.0% | |
| TGTTCTCTGGTGCAAAGTGC+CGG | - | chr1.3:55756626-55756645 | None:intergenic | 50.0% | |
| TTCAGTGGAAACCCAAGCTC+AGG | - | chr1.3:55755014-55755033 | None:intergenic | 50.0% | |
| ! | ACCAACAGGCATCGTGTAAC+AGG | - | chr1.3:55753466-55753485 | None:intergenic | 50.0% |
| ! | ATTCAGCAAGTGGTGGAGTG+TGG | - | chr1.3:55753033-55753052 | None:intergenic | 50.0% |
| ! | TAGGTACTGCCCTCAATGCA+AGG | + | chr1.3:55757037-55757056 | MS.gene07512:intron | 50.0% |
| !! | CTCTAGGACCAGATGACATG+TGG | + | chr1.3:55756918-55756937 | MS.gene07512:CDS | 50.0% |
| ACGTGCGTTCAAGGGAAAGC+TGG | + | chr1.3:55753307-55753326 | MS.gene07512:CDS | 55.0% | |
| AGCATGCAGTGCCCAATGCT+TGG | - | chr1.3:55755330-55755349 | None:intergenic | 55.0% | |
| AGCTTTCCCTTGAACGCACG+TGG | - | chr1.3:55753308-55753327 | None:intergenic | 55.0% | |
| ATTGTCCGGGTGACAGTGGA+AGG | - | chr1.3:55755217-55755236 | None:intergenic | 55.0% | |
| CACTTCCTTCCACTGTCACC+CGG | + | chr1.3:55755209-55755228 | MS.gene07512:CDS | 55.0% | |
| CATATCTCACTAGGCGGGGT+CGG | - | chr1.3:55756055-55756074 | None:intergenic | 55.0% | |
| CGTTAGGCCAATGTCGGACT+TGG | + | chr1.3:55754533-55754552 | MS.gene07512:intron | 55.0% | |
| CTCTGCAGCAACCATGCTTC+AGG | - | chr1.3:55755300-55755319 | None:intergenic | 55.0% | |
| CTGATGAACGTCGGCCATAC+AGG | - | chr1.3:55754227-55754246 | None:intergenic | 55.0% | |
| GAACAAGAGGGGACATCCTG+TGG | + | chr1.3:55756641-55756660 | MS.gene07512:CDS | 55.0% | |
| GACAGTCACAGTGTACGGCA+TGG | - | chr1.3:55755278-55755297 | None:intergenic | 55.0% | |
| GGATGTCCCCTCTTGTTCTC+TGG | - | chr1.3:55756639-55756658 | None:intergenic | 55.0% | |
| GGCTCCACTCTTGAGTCGAT+AGG | - | chr1.3:55755566-55755585 | None:intergenic | 55.0% | |
| GGGGGACCTACCTTGTCTAA+TGG | + | chr1.3:55752839-55752858 | MS.gene07512:CDS | 55.0% | |
| GTTGCACCACGTGCGTTCAA+GGG | + | chr1.3:55753299-55753318 | MS.gene07512:CDS | 55.0% | |
| TCACAGTGAACCGAGGAACC+CGG | + | chr1.3:55756604-55756623 | MS.gene07512:CDS | 55.0% | |
| TCACTGAACAGTGGGAAGGG+TGG | + | chr1.3:55756386-55756405 | MS.gene07512:intron | 55.0% | |
| TGTCATTGTCCGGGTGACAG+TGG | - | chr1.3:55755221-55755240 | None:intergenic | 55.0% | |
| TGTTGCACCACGTGCGTTCA+AGG | + | chr1.3:55753298-55753317 | MS.gene07512:CDS | 55.0% | |
| ! | ATCGACTCAAGAGTGGAGCC+AGG | + | chr1.3:55755566-55755585 | MS.gene07512:CDS | 55.0% |
| ! | GTTCTCTGGTGCAAAGTGCC+GGG | - | chr1.3:55756625-55756644 | None:intergenic | 55.0% |
| !! | GTGGCCTATCGACTCAAGAG+TGG | + | chr1.3:55755559-55755578 | MS.gene07512:CDS | 55.0% |
| ACAGTGGGAAGGGTGGAGAG+AGG | + | chr1.3:55756393-55756412 | MS.gene07512:intron | 60.0% | |
| CGACCCCGCCTAGTGAGATA+TGG | + | chr1.3:55756053-55756072 | MS.gene07512:intron | 60.0% | |
| CGGGTGACAGTGGAAGGAAG+TGG | - | chr1.3:55755211-55755230 | None:intergenic | 60.0% | |
| GAAGGACTCGGATGGTAGGC+CGG | + | chr1.3:55754771-55754790 | MS.gene07512:CDS | 60.0% | |
| TGCAACAGCAGTTCGCCCAG+AGG | - | chr1.3:55753285-55753304 | None:intergenic | 60.0% | |
| !! | GTGCAAAGTGCCGGGTTCCT+CGG | - | chr1.3:55756617-55756636 | None:intergenic | 60.0% |
| ACTAGGCGGGGTCGGCTACA+TGG | - | chr1.3:55756047-55756066 | None:intergenic | 65.0% | |
| CTCGGATGGTAGGCCGGATG+AGG | + | chr1.3:55754777-55754796 | MS.gene07512:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 55752779 | 55757575 | 55752779 | ID=MS.gene07512 |
| chr1.3 | mRNA | 55752779 | 55757575 | 55752779 | ID=MS.gene07512.t1;Parent=MS.gene07512 |
| chr1.3 | exon | 55752779 | 55753108 | 55752779 | ID=MS.gene07512.t1.exon1;Parent=MS.gene07512.t1 |
| chr1.3 | CDS | 55752779 | 55753108 | 55752779 | ID=cds.MS.gene07512.t1;Parent=MS.gene07512.t1 |
| chr1.3 | exon | 55753236 | 55753376 | 55753236 | ID=MS.gene07512.t1.exon2;Parent=MS.gene07512.t1 |
| chr1.3 | CDS | 55753236 | 55753376 | 55753236 | ID=cds.MS.gene07512.t1;Parent=MS.gene07512.t1 |
| chr1.3 | exon | 55754697 | 55754867 | 55754697 | ID=MS.gene07512.t1.exon3;Parent=MS.gene07512.t1 |
| chr1.3 | CDS | 55754697 | 55754867 | 55754697 | ID=cds.MS.gene07512.t1;Parent=MS.gene07512.t1 |
| chr1.3 | exon | 55755127 | 55755384 | 55755127 | ID=MS.gene07512.t1.exon4;Parent=MS.gene07512.t1 |
| chr1.3 | CDS | 55755127 | 55755384 | 55755127 | ID=cds.MS.gene07512.t1;Parent=MS.gene07512.t1 |
| chr1.3 | exon | 55755481 | 55755626 | 55755481 | ID=MS.gene07512.t1.exon5;Parent=MS.gene07512.t1 |
| chr1.3 | CDS | 55755481 | 55755626 | 55755481 | ID=cds.MS.gene07512.t1;Parent=MS.gene07512.t1 |
| chr1.3 | exon | 55756397 | 55756939 | 55756397 | ID=MS.gene07512.t1.exon6;Parent=MS.gene07512.t1 |
| chr1.3 | CDS | 55756397 | 55756939 | 55756397 | ID=cds.MS.gene07512.t1;Parent=MS.gene07512.t1 |
| chr1.3 | exon | 55757040 | 55757310 | 55757040 | ID=MS.gene07512.t1.exon7;Parent=MS.gene07512.t1 |
| chr1.3 | CDS | 55757040 | 55757310 | 55757040 | ID=cds.MS.gene07512.t1;Parent=MS.gene07512.t1 |
| chr1.3 | exon | 55757459 | 55757575 | 55757459 | ID=MS.gene07512.t1.exon8;Parent=MS.gene07512.t1 |
| chr1.3 | CDS | 55757459 | 55757575 | 55757459 | ID=cds.MS.gene07512.t1;Parent=MS.gene07512.t1 |
| Gene Sequence |
| Protein sequence |