Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07513.t1 | XP_013468875.1 | 96.6 | 872 | 29 | 1 | 35 | 905 | 51 | 922 | 0.00E+00 | 1635.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07513.t1 | Q9ZSB5 | 59.3 | 883 | 316 | 10 | 35 | 903 | 51 | 904 | 8.9e-295 | 1014.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07513.t1 | A0A072VM85 | 96.6 | 872 | 29 | 1 | 35 | 905 | 51 | 922 | 0.0e+00 | 1635.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049209 | MS.gene07513 | 0.806262 | 8.96E-50 | -1.69E-46 |
MS.gene057682 | MS.gene07513 | 0.802817 | 4.69E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene07512 | MS.gene07513 | PPI |
MS.gene07513 | MS.gene057833 | PPI |
MS.gene07513 | MS.gene26652 | PPI |
MS.gene07513 | MS.gene70078 | PPI |
MS.gene86827 | MS.gene07513 | PPI |
MS.gene07513 | MS.gene49850 | PPI |
MS.gene07513 | MS.gene062155 | PPI |
MS.gene07513 | MS.gene66284 | PPI |
MS.gene030258 | MS.gene07513 | PPI |
MS.gene057838 | MS.gene07513 | PPI |
MS.gene07513 | MS.gene70072 | PPI |
MS.gene07513 | MS.gene037502 | PPI |
MS.gene07513 | MS.gene004975 | PPI |
MS.gene07513 | MS.gene75111 | PPI |
MS.gene07513 | MS.gene70077 | PPI |
MS.gene07513 | MS.gene017678 | PPI |
MS.gene07513 | MS.gene057841 | PPI |
MS.gene07513 | MS.gene013955 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07513.t1 | MTR_1g077980 | 96.560 | 872 | 29 | 1 | 35 | 905 | 51 | 922 | 0.0 | 1745 |
MS.gene07513.t1 | MTR_7g088760 | 49.601 | 877 | 410 | 14 | 35 | 897 | 46 | 904 | 0.0 | 839 |
MS.gene07513.t1 | MTR_7g088760 | 48.658 | 894 | 410 | 15 | 35 | 897 | 46 | 921 | 0.0 | 830 |
MS.gene07513.t1 | MTR_2g087710 | 45.767 | 815 | 377 | 12 | 104 | 899 | 99 | 867 | 0.0 | 659 |
MS.gene07513.t1 | MTR_7g106570 | 42.793 | 895 | 442 | 17 | 33 | 904 | 47 | 894 | 0.0 | 623 |
MS.gene07513.t1 | MTR_1g014260 | 33.143 | 175 | 91 | 6 | 740 | 891 | 351 | 522 | 5.36e-22 | 102 |
MS.gene07513.t1 | MTR_1g014260 | 28.723 | 188 | 114 | 3 | 301 | 488 | 179 | 346 | 8.61e-15 | 79.3 |
MS.gene07513.t1 | MTR_4g115880 | 31.737 | 167 | 88 | 5 | 748 | 891 | 415 | 578 | 1.32e-20 | 97.4 |
MS.gene07513.t1 | MTR_4g115880 | 30.144 | 209 | 97 | 5 | 301 | 481 | 195 | 382 | 2.56e-16 | 84.0 |
MS.gene07513.t1 | MTR_6g022310 | 38.312 | 154 | 89 | 5 | 744 | 896 | 280 | 428 | 1.25e-19 | 94.7 |
MS.gene07513.t1 | MTR_6g022310 | 29.897 | 194 | 106 | 7 | 303 | 494 | 127 | 292 | 2.02e-11 | 68.2 |
MS.gene07513.t1 | MTR_1g014680 | 38.158 | 152 | 87 | 4 | 745 | 893 | 339 | 486 | 2.05e-19 | 94.4 |
MS.gene07513.t1 | MTR_5g430360 | 37.908 | 153 | 87 | 6 | 748 | 896 | 136 | 284 | 4.36e-18 | 89.4 |
MS.gene07513.t1 | MTR_5g030360 | 37.908 | 153 | 87 | 6 | 748 | 896 | 304 | 452 | 6.42e-18 | 89.4 |
MS.gene07513.t1 | MTR_3g100480 | 34.868 | 152 | 92 | 4 | 745 | 893 | 741 | 888 | 8.73e-18 | 89.4 |
MS.gene07513.t1 | MTR_3g083600 | 31.837 | 245 | 130 | 6 | 248 | 483 | 170 | 386 | 1.61e-17 | 88.6 |
MS.gene07513.t1 | MTR_3g083600 | 35.338 | 133 | 70 | 4 | 776 | 893 | 938 | 1069 | 2.04e-15 | 81.6 |
MS.gene07513.t1 | MTR_5g032380 | 36.242 | 149 | 88 | 4 | 748 | 893 | 582 | 726 | 2.81e-17 | 87.4 |
MS.gene07513.t1 | MTR_6g022300 | 37.333 | 150 | 88 | 5 | 748 | 896 | 224 | 368 | 3.28e-17 | 86.7 |
MS.gene07513.t1 | MTR_8g090190 | 32.203 | 177 | 99 | 6 | 734 | 895 | 194 | 364 | 6.45e-17 | 84.0 |
MS.gene07513.t1 | MTR_2g071620 | 34.228 | 149 | 91 | 4 | 748 | 893 | 625 | 769 | 7.04e-17 | 86.3 |
MS.gene07513.t1 | MTR_6g022290 | 36.667 | 150 | 89 | 5 | 748 | 896 | 186 | 330 | 7.58e-17 | 85.5 |
MS.gene07513.t1 | MTR_6g022290 | 27.551 | 196 | 108 | 6 | 303 | 494 | 29 | 194 | 1.85e-11 | 68.2 |
MS.gene07513.t1 | MTR_4g130940 | 36.424 | 151 | 91 | 5 | 745 | 893 | 248 | 395 | 2.88e-16 | 84.0 |
MS.gene07513.t1 | MTR_4g130940 | 36.424 | 151 | 91 | 5 | 745 | 893 | 248 | 395 | 3.20e-16 | 84.0 |
MS.gene07513.t1 | MTR_8g067060 | 37.162 | 148 | 85 | 5 | 753 | 896 | 357 | 500 | 1.01e-15 | 81.6 |
MS.gene07513.t1 | MTR_8g471100 | 37.162 | 148 | 85 | 5 | 753 | 896 | 366 | 509 | 1.12e-15 | 81.6 |
MS.gene07513.t1 | MTR_5g066000 | 31.579 | 152 | 96 | 5 | 745 | 893 | 699 | 845 | 4.75e-15 | 80.5 |
MS.gene07513.t1 | MTR_3g087140 | 29.050 | 179 | 106 | 5 | 734 | 897 | 194 | 366 | 5.18e-15 | 78.2 |
MS.gene07513.t1 | MTR_3g100480 | 30.556 | 180 | 92 | 5 | 745 | 893 | 741 | 918 | 2.10e-14 | 78.2 |
MS.gene07513.t1 | MTR_0279s0020 | 37.209 | 129 | 75 | 4 | 769 | 896 | 163 | 286 | 2.26e-14 | 75.1 |
MS.gene07513.t1 | MTR_0279s0020 | 37.302 | 126 | 73 | 4 | 769 | 893 | 172 | 292 | 1.27e-13 | 73.6 |
MS.gene07513.t1 | MTR_2g070390 | 32.886 | 149 | 94 | 5 | 748 | 894 | 185 | 329 | 2.07e-11 | 68.2 |
MS.gene07513.t1 | MTR_3g108660 | 33.846 | 130 | 82 | 3 | 748 | 874 | 255 | 383 | 3.88e-11 | 67.8 |
MS.gene07513.t1 | MTR_3g108660 | 33.846 | 130 | 82 | 3 | 748 | 874 | 255 | 383 | 5.22e-11 | 67.4 |
MS.gene07513.t1 | MTR_1g010040 | 31.538 | 130 | 85 | 3 | 748 | 874 | 255 | 383 | 9.56e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07513.t1 | AT4G10570 | 62.260 | 885 | 287 | 11 | 35 | 903 | 51 | 904 | 0.0 | 1076 |
MS.gene07513.t1 | AT4G10590 | 62.018 | 882 | 289 | 12 | 35 | 901 | 51 | 901 | 0.0 | 1066 |
MS.gene07513.t1 | AT4G10590 | 62.018 | 882 | 289 | 12 | 35 | 901 | 51 | 901 | 0.0 | 1066 |
MS.gene07513.t1 | AT4G10590 | 62.018 | 882 | 289 | 12 | 35 | 901 | 51 | 901 | 0.0 | 1066 |
MS.gene07513.t1 | AT4G10590 | 62.018 | 882 | 289 | 12 | 35 | 901 | 51 | 901 | 0.0 | 1066 |
MS.gene07513.t1 | AT1G32850 | 60.000 | 870 | 306 | 12 | 35 | 897 | 49 | 883 | 0.0 | 1014 |
MS.gene07513.t1 | AT2G40930 | 50.395 | 885 | 397 | 16 | 35 | 893 | 47 | 915 | 0.0 | 826 |
MS.gene07513.t1 | AT2G40930 | 50.395 | 885 | 397 | 16 | 35 | 893 | 47 | 915 | 0.0 | 826 |
MS.gene07513.t1 | AT5G22030 | 47.891 | 806 | 369 | 17 | 104 | 894 | 100 | 869 | 0.0 | 704 |
MS.gene07513.t1 | AT5G22030 | 50.136 | 738 | 317 | 17 | 172 | 894 | 210 | 911 | 0.0 | 682 |
MS.gene07513.t1 | AT4G31670 | 37.908 | 153 | 88 | 4 | 745 | 894 | 326 | 474 | 3.85e-20 | 96.3 |
MS.gene07513.t1 | AT2G24640 | 37.255 | 153 | 89 | 4 | 745 | 894 | 162 | 310 | 5.87e-20 | 94.7 |
MS.gene07513.t1 | AT5G46740 | 37.500 | 152 | 88 | 5 | 748 | 896 | 115 | 262 | 6.60e-20 | 94.7 |
MS.gene07513.t1 | AT2G32780 | 35.533 | 197 | 97 | 6 | 294 | 483 | 189 | 362 | 8.79e-20 | 95.9 |
MS.gene07513.t1 | AT2G32780 | 37.037 | 135 | 65 | 5 | 777 | 894 | 952 | 1083 | 2.42e-14 | 78.2 |
MS.gene07513.t1 | AT5G46740 | 36.538 | 156 | 92 | 5 | 744 | 896 | 320 | 471 | 1.26e-19 | 94.7 |
MS.gene07513.t1 | AT2G24640 | 37.255 | 153 | 89 | 4 | 745 | 894 | 332 | 480 | 1.43e-19 | 94.7 |
MS.gene07513.t1 | AT1G04860 | 34.783 | 184 | 84 | 4 | 302 | 479 | 230 | 383 | 6.51e-19 | 92.8 |
MS.gene07513.t1 | AT1G04860 | 38.931 | 131 | 64 | 6 | 777 | 894 | 830 | 957 | 8.32e-14 | 76.3 |
MS.gene07513.t1 | AT4G17895 | 36.184 | 152 | 90 | 5 | 748 | 896 | 331 | 478 | 2.46e-17 | 87.4 |
MS.gene07513.t1 | AT1G17110 | 34.899 | 149 | 90 | 4 | 748 | 893 | 603 | 747 | 2.94e-17 | 87.4 |
MS.gene07513.t1 | AT1G17110 | 34.899 | 149 | 90 | 4 | 748 | 893 | 599 | 743 | 3.01e-17 | 87.4 |
MS.gene07513.t1 | AT1G17110 | 34.899 | 149 | 90 | 4 | 748 | 893 | 599 | 743 | 3.01e-17 | 87.4 |
MS.gene07513.t1 | AT5G10790 | 29.412 | 170 | 91 | 5 | 748 | 891 | 233 | 399 | 3.56e-17 | 85.5 |
MS.gene07513.t1 | AT5G10790 | 29.412 | 170 | 91 | 5 | 748 | 891 | 362 | 528 | 6.68e-17 | 85.5 |
MS.gene07513.t1 | AT4G24560 | 34.228 | 149 | 90 | 4 | 748 | 893 | 703 | 846 | 1.86e-16 | 85.1 |
MS.gene07513.t1 | AT5G65450 | 34.667 | 150 | 90 | 5 | 748 | 893 | 506 | 651 | 2.00e-15 | 81.3 |
MS.gene07513.t1 | AT5G65450 | 34.667 | 150 | 90 | 5 | 748 | 893 | 487 | 632 | 2.50e-15 | 80.9 |
MS.gene07513.t1 | AT4G39910 | 33.129 | 163 | 89 | 6 | 748 | 895 | 211 | 368 | 2.96e-15 | 79.0 |
MS.gene07513.t1 | AT2G22310 | 32.934 | 167 | 86 | 7 | 748 | 896 | 169 | 327 | 6.56e-15 | 77.4 |
MS.gene07513.t1 | AT2G22310 | 32.934 | 167 | 86 | 7 | 748 | 896 | 174 | 332 | 6.63e-15 | 77.4 |
MS.gene07513.t1 | AT2G22310 | 32.934 | 167 | 86 | 7 | 748 | 896 | 206 | 364 | 1.22e-14 | 77.0 |
MS.gene07513.t1 | AT5G57990 | 32.450 | 151 | 92 | 5 | 744 | 893 | 268 | 409 | 1.86e-14 | 78.6 |
MS.gene07513.t1 | AT4G30890 | 37.288 | 118 | 70 | 4 | 779 | 894 | 436 | 551 | 1.53e-12 | 71.6 |
MS.gene07513.t1 | AT4G30890 | 37.288 | 118 | 70 | 4 | 779 | 894 | 436 | 551 | 1.53e-12 | 71.6 |
MS.gene07513.t1 | AT4G30890 | 37.288 | 118 | 70 | 4 | 779 | 894 | 436 | 551 | 1.53e-12 | 71.6 |
MS.gene07513.t1 | AT3G49600 | 32.143 | 140 | 86 | 4 | 748 | 879 | 253 | 391 | 2.69e-11 | 68.2 |
MS.gene07513.t1 | AT3G49600 | 32.143 | 140 | 86 | 4 | 748 | 879 | 253 | 391 | 2.78e-11 | 68.2 |
MS.gene07513.t1 | AT3G49600 | 32.143 | 140 | 86 | 4 | 748 | 879 | 253 | 391 | 2.78e-11 | 68.2 |
MS.gene07513.t1 | AT3G14400 | 31.788 | 151 | 97 | 5 | 745 | 893 | 188 | 334 | 3.24e-11 | 67.8 |
MS.gene07513.t1 | AT3G14400 | 28.358 | 201 | 110 | 5 | 304 | 495 | 25 | 200 | 5.24e-11 | 67.0 |
Find 220 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTCCCTTGGTTACTTATT+TGG | 0.167537 | 1.2:-62639100 | MS.gene07513:CDS |
AATTATATTAGGCTTCTATT+TGG | 0.193463 | 1.2:-62643227 | MS.gene07513:intron |
GTGGAAATTGCCAGAGATTT+TGG | 0.202696 | 1.2:-62638436 | MS.gene07513:CDS |
GAGCTAGTGTGCAAAGTTAA+AGG | 0.260338 | 1.2:-62643355 | MS.gene07513:CDS |
GTGAATTAGCACTTGCATTT+GGG | 0.290290 | 1.2:-62642290 | MS.gene07513:CDS |
TTGAGGAAACTTTGGTCCTC+TGG | 0.299288 | 1.2:-62642261 | MS.gene07513:CDS |
CTTCCTGAAGTTCACAAAAC+TGG | 0.302951 | 1.2:-62638706 | MS.gene07513:CDS |
GCTGATCGTTCCTCTCATTC+TGG | 0.315839 | 1.2:-62642781 | MS.gene07513:CDS |
GGAATCATTGACTTCAATAA+AGG | 0.321302 | 1.2:-62640005 | MS.gene07513:CDS |
TTTCCACAAGTCCAGTTTCT+TGG | 0.325981 | 1.2:+62638452 | None:intergenic |
ATGCAGTCCATCCAATAAAA+AGG | 0.328639 | 1.2:+62640820 | None:intergenic |
GGTGAATTAGCACTTGCATT+TGG | 0.331811 | 1.2:-62642291 | MS.gene07513:CDS |
TTAATTTCAGCTTCAGAAAC+AGG | 0.340496 | 1.2:+62638020 | None:intergenic |
CTCTGCAGCAACCATGCTTC+AGG | 0.341873 | 1.2:+62640230 | None:intergenic |
TTGGAAGAAGACCCTCAATA+TGG | 0.349829 | 1.2:-62639081 | MS.gene07513:CDS |
AGCAACCATTACGGTGGTTT+AGG | 0.350370 | 1.2:-62638267 | MS.gene07513:CDS |
GAATAGCGCTCTTCAATGTT+TGG | 0.351618 | 1.2:-62642521 | MS.gene07513:CDS |
GAACTTCCCCATTCACAATC+TGG | 0.353781 | 1.2:-62638352 | MS.gene07513:CDS |
AAAACCCAGTGCACATATAA+AGG | 0.354307 | 1.2:-62638788 | MS.gene07513:CDS |
TGTTCTCTGGTGCAAAGTGC+CGG | 0.355262 | 1.2:+62638904 | None:intergenic |
AATTGTAAAATTAAGCAAAA+AGG | 0.364916 | 1.2:-62644138 | MS.gene07513:intron |
ATATAAAGGTCTTTGCTGAT+TGG | 0.366153 | 1.2:-62638774 | MS.gene07513:CDS |
ATTATATTAGGCTTCTATTT+GGG | 0.367380 | 1.2:-62643226 | MS.gene07513:intron |
ATCAACTTCCTTGGCAATGC+TGG | 0.378205 | 1.2:+62644245 | None:intergenic |
GTCTGTGTTCCTTGCATTGA+GGG | 0.381184 | 1.2:+62638481 | None:intergenic |
GCCAAGGAAGTTGATTTCTC+AGG | 0.383623 | 1.2:-62644237 | MS.gene07513:CDS |
GATGGAAGAAGCGACGTCTT+AGG | 0.385620 | 1.2:-62637946 | None:intergenic |
AAGTTCATCACTGACTACTA+TGG | 0.386122 | 1.2:-62642620 | MS.gene07513:CDS |
ACAAAGAAATAGCTTCTTGC+CGG | 0.386336 | 1.2:+62638665 | None:intergenic |
CAGACAAGCTACCAAGAAAC+TGG | 0.387149 | 1.2:-62638463 | MS.gene07513:CDS |
TGGTAATGATAAGTACATAA+AGG | 0.388653 | 1.2:+62640339 | None:intergenic |
GGTGGAGAGAGGAAGATCTT+TGG | 0.388726 | 1.2:-62639123 | MS.gene07513:CDS |
AGATCATCTGTATCAATTGC+AGG | 0.391184 | 1.2:-62642709 | MS.gene07513:CDS |
TGACGTGACTGTCATCAAAA+TGG | 0.395919 | 1.2:+62638045 | None:intergenic |
TCATTCTGGTGTGCATTCAA+TGG | 0.399599 | 1.2:-62642767 | MS.gene07513:CDS |
TATCACAGATGCCTTGTCAA+TGG | 0.404625 | 1.2:+62638810 | None:intergenic |
TGTTGCACCACGTGCGTTCA+AGG | 0.406091 | 1.2:-62642229 | MS.gene07513:CDS |
AGACAGTAATTGTCATTGTC+CGG | 0.406135 | 1.2:+62640299 | None:intergenic |
TCAATCACCTTTAGATTAAG+TGG | 0.406422 | 1.2:+62644182 | None:intergenic |
CAGAGATCTTTGCCAAGCAT+TGG | 0.409945 | 1.2:-62640212 | MS.gene07513:CDS |
GTGCAAAGTGCCGGGTTCCT+CGG | 0.410838 | 1.2:+62638913 | None:intergenic |
AGAAATATTGCATCGACATC+TGG | 0.412333 | 1.2:-62639927 | MS.gene07513:CDS |
TCTCATGAAGGGAAGGAAAC+TGG | 0.414310 | 1.2:-62638991 | MS.gene07513:CDS |
ATTATATCAGAATTATCAAT+TGG | 0.417193 | 1.2:+62644711 | None:intergenic |
CACTGAATTGTGGAGCAAAT+CGG | 0.419702 | 1.2:+62642196 | None:intergenic |
AGTTTGCATTCTCCAATGTC+TGG | 0.419774 | 1.2:+62643160 | None:intergenic |
AATGGTTGCTGATTGCATAA+AGG | 0.420321 | 1.2:+62638280 | None:intergenic |
CAAGTTGGCAGAGGTATGTT+GGG | 0.420787 | 1.2:-62644824 | MS.gene07513:CDS |
ATCACAGATGCCTTGTCAAT+GGG | 0.425512 | 1.2:+62638811 | None:intergenic |
GAGTCCTTCATTTCAATGTA+AGG | 0.429050 | 1.2:+62640770 | None:intergenic |
AATTCTGATATAATTTCAAA+TGG | 0.429572 | 1.2:-62644702 | MS.gene07513:CDS |
TTTAGCAGGACTGCAGAACT+TGG | 0.431003 | 1.2:-62642560 | MS.gene07513:CDS |
GATGATCTTGGAGGTTCTAA+TGG | 0.431147 | 1.2:+62642724 | None:intergenic |
GGATGTCCCCTCTTGTTCTC+TGG | 0.432883 | 1.2:+62638891 | None:intergenic |
GTTCTCTGGTGCAAAGTGCC+GGG | 0.438834 | 1.2:+62638905 | None:intergenic |
AATGGTCACTCAAGTGGGTC+TGG | 0.439704 | 1.2:-62642670 | MS.gene07513:CDS |
AAGACGTCGCTTCTTCCATC+TGG | 0.440402 | 1.2:+62637949 | None:intergenic |
GGGACTTGTTGAGGAAACTT+TGG | 0.440723 | 1.2:-62642269 | MS.gene07513:CDS |
GGTAATGATAAGTACATAAA+GGG | 0.444185 | 1.2:+62640340 | None:intergenic |
ATCAACATGGAGAATCCTTT+AGG | 0.444926 | 1.2:-62642448 | MS.gene07513:CDS |
GCAGGCCATCAGAAGATTGC+TGG | 0.446316 | 1.2:+62644775 | None:intergenic |
CAATCTTACCACATGTCATC+TGG | 0.451523 | 1.2:+62638601 | None:intergenic |
GACATTGGAGAATGCAAACT+TGG | 0.453854 | 1.2:-62643157 | MS.gene07513:CDS |
ACTGAATTGTGGAGCAAATC+GGG | 0.454165 | 1.2:+62642197 | None:intergenic |
AAGGAAACTGGTTTCATCTC+AGG | 0.457552 | 1.2:-62638979 | MS.gene07513:CDS |
ATCAGAATTATCAATTGGAC+CGG | 0.457774 | 1.2:+62644716 | None:intergenic |
GCAATTGATACAGATGATCT+TGG | 0.458422 | 1.2:+62642712 | None:intergenic |
AGAGATCTTTGCCAAGCATT+GGG | 0.458789 | 1.2:-62640211 | MS.gene07513:CDS |
ACCTCAATGCTGTACTGCTT+CGG | 0.459105 | 1.2:+62644209 | None:intergenic |
ATCTGGTCCTAGAGGTTCTT+CGG | 0.459925 | 1.2:+62638618 | None:intergenic |
GGTCAAATCCAGATTGTGAA+TGG | 0.461365 | 1.2:+62638344 | None:intergenic |
CATTCTGGTGTGCATTCAAT+GGG | 0.461609 | 1.2:-62642766 | MS.gene07513:CDS |
GGTGAAAGAGGTGGTTTAGC+AGG | 0.462978 | 1.2:-62642574 | MS.gene07513:CDS |
TCAATGTTGGCTCCATATTG+AGG | 0.465522 | 1.2:+62639069 | None:intergenic |
CAAGTATGGGAAAGGCTGTT+GGG | 0.466815 | 1.2:-62644603 | MS.gene07513:CDS |
GTCAAATCCAGATTGTGAAT+GGG | 0.468661 | 1.2:+62638345 | None:intergenic |
CTTCGTTAGTTAAAACAAGT+TGG | 0.468962 | 1.2:+62638851 | None:intergenic |
GATAAATATGACGTCTATAG+TGG | 0.470173 | 1.2:-62642595 | MS.gene07513:CDS |
TCAAGTTGGCAGAGGTATGT+TGG | 0.470261 | 1.2:-62644825 | MS.gene07513:CDS |
AAAGACCTTTATATGTGCAC+TGG | 0.472356 | 1.2:+62638783 | None:intergenic |
TATGCAATCAGCAACCATTA+CGG | 0.474161 | 1.2:-62638276 | MS.gene07513:CDS |
TAAAGGTTATACACATAGGA+TGG | 0.475468 | 1.2:+62638297 | None:intergenic |
CAATGTTGGCTCCATATTGA+GGG | 0.480052 | 1.2:+62639070 | None:intergenic |
GAAGATCTTTGGAACTCCCT+TGG | 0.482950 | 1.2:-62639112 | MS.gene07513:CDS |
CCCTGAGAAATCAACTTCCT+TGG | 0.487604 | 1.2:+62644236 | None:intergenic |
TATATGATGCAAGCTATTTG+AGG | 0.490281 | 1.2:-62638732 | MS.gene07513:CDS |
TGAGGAAACTTTGGTCCTCT+GGG | 0.491053 | 1.2:-62642260 | MS.gene07513:CDS |
TGTCTGTGTTCCTTGCATTG+AGG | 0.491807 | 1.2:+62638480 | None:intergenic |
AGCATGCAGTGCCCAATGCT+TGG | 0.492001 | 1.2:+62640200 | None:intergenic |
TTGCATTTGGGGACTTGTTG+AGG | 0.494177 | 1.2:-62642278 | MS.gene07513:CDS |
CATTACGGTGGTTTAGGTGG+TGG | 0.494345 | 1.2:-62638261 | MS.gene07513:CDS |
CCAAGGAAGTTGATTTCTCA+GGG | 0.495656 | 1.2:-62644236 | MS.gene07513:CDS |
ACAAGTATGGGAAAGGCTGT+TGG | 0.500405 | 1.2:-62644604 | MS.gene07513:CDS |
TTAGCAGGACTGCAGAACTT+GGG | 0.500451 | 1.2:-62642559 | MS.gene07513:CDS |
AAAGCCTTACATTGAAATGA+AGG | 0.501423 | 1.2:-62640774 | MS.gene07513:CDS |
CACTTCCTTCCACTGTCACC+CGG | 0.503998 | 1.2:-62640318 | MS.gene07513:CDS |
CTCGGATGGTAGGCCGGATG+AGG | 0.505210 | 1.2:-62640750 | MS.gene07513:CDS |
ATATGATGCAAGCTATTTGA+GGG | 0.506090 | 1.2:-62638731 | MS.gene07513:CDS |
TTTAGTTCCTCAACAAGTAT+GGG | 0.508258 | 1.2:-62644616 | MS.gene07513:CDS |
ATTGAAGTCAATGATTCCAA+TGG | 0.513982 | 1.2:+62640010 | None:intergenic |
ACGTGCGTTCAAGGGAAAGC+TGG | 0.515230 | 1.2:-62642220 | MS.gene07513:CDS |
CAAAGAAATAGCTTCTTGCC+GGG | 0.515685 | 1.2:+62638666 | None:intergenic |
GTCCATACACGCATTCCTAA+AGG | 0.518820 | 1.2:+62642433 | None:intergenic |
CAAATGGAAGTAATTGTGAC+GGG | 0.525856 | 1.2:-62644686 | MS.gene07513:CDS |
AATGGGAAATGAATTAGCAT+TGG | 0.527118 | 1.2:-62642749 | MS.gene07513:CDS |
AGTTGGAAGCGACGTCCAGA+TGG | 0.527287 | 1.2:-62637964 | MS.gene07513:CDS |
AACTAAGTCTCATGAAGGGA+AGG | 0.531234 | 1.2:-62638998 | MS.gene07513:CDS |
TTTAGATATTCATCGACCAT+TGG | 0.531240 | 1.2:-62644658 | MS.gene07513:CDS |
AGCCTTTCCCATACTTGTTG+AGG | 0.532585 | 1.2:+62644609 | None:intergenic |
ATTGATTGTTGATGAATGCC+AGG | 0.532873 | 1.2:-62640681 | MS.gene07513:intron |
CTGCTCCCCATCATCTTCTC+CGG | 0.535694 | 1.2:+62645938 | None:intergenic |
GAAGGACTCGGATGGTAGGC+CGG | 0.535738 | 1.2:-62640756 | MS.gene07513:CDS |
AGTGAACAGTATCGGCATGC+AGG | 0.538726 | 1.2:+62644757 | None:intergenic |
GACATATGTACATAGAATGT+TGG | 0.539698 | 1.2:-62639046 | MS.gene07513:CDS |
ATTGTCCGGGTGACAGTGGA+AGG | 0.540739 | 1.2:+62640313 | None:intergenic |
GGTGTACCCACTTAATCTAA+AGG | 0.542422 | 1.2:-62644189 | MS.gene07513:CDS |
AACTAACTTGAGAATCATGC+TGG | 0.546603 | 1.2:+62642166 | None:intergenic |
AGCTTTCCCTTGAACGCACG+TGG | 0.549334 | 1.2:+62642222 | None:intergenic |
AAGTATGTGAAAAGTAAAGA+TGG | 0.549335 | 1.2:-62638321 | MS.gene07513:CDS |
GACGTCTATAGTGGTGAAAG+AGG | 0.550637 | 1.2:-62642586 | MS.gene07513:CDS |
GACAGTAATTGTCATTGTCC+GGG | 0.551707 | 1.2:+62640300 | None:intergenic |
AAGAGCGCTATTCATAAAGC+AGG | 0.553621 | 1.2:+62642531 | None:intergenic |
TCTTCAACTAAGTCTCATGA+AGG | 0.553689 | 1.2:-62639003 | MS.gene07513:CDS |
TTGTCTAATGGTCACTCAAG+TGG | 0.555942 | 1.2:-62642676 | MS.gene07513:CDS |
TCATTTGCGACTTCCTCATC+CGG | 0.556059 | 1.2:+62640737 | None:intergenic |
TTGCTTACCACCCATGCAGA+TGG | 0.556869 | 1.2:-62644851 | MS.gene07513:CDS |
TGTTCACTGAACAGTGGGAA+GGG | 0.557069 | 1.2:-62639144 | MS.gene07513:intron |
TGAATTAGCACTTGCATTTG+GGG | 0.557302 | 1.2:-62642289 | MS.gene07513:CDS |
TTCAGGACAGTCACAGTGTA+CGG | 0.560190 | 1.2:+62640247 | None:intergenic |
CACCACCTAAACCACCGTAA+TGG | 0.561137 | 1.2:+62638262 | None:intergenic |
TCGTTATCTAGATAATCCAT+TGG | 0.561503 | 1.2:-62640026 | MS.gene07513:CDS |
ATTACGGTGGTTTAGGTGGT+GGG | 0.561699 | 1.2:-62638260 | MS.gene07513:CDS |
ATCGACTCAAGAGTGGAGCC+AGG | 0.567147 | 1.2:-62639961 | MS.gene07513:CDS |
GATCATCTGTATCAATTGCA+GGG | 0.567157 | 1.2:-62642708 | MS.gene07513:CDS |
GAACAAAGAGTCATTGCTGA+CGG | 0.567578 | 1.2:-62643190 | MS.gene07513:CDS |
TGTCTAATGGTCACTCAAGT+GGG | 0.570423 | 1.2:-62642675 | MS.gene07513:CDS |
AAAGGATGAAGAACATATTG+TGG | 0.573464 | 1.2:-62639987 | MS.gene07513:CDS |
AAGACCTTTATATGTGCACT+GGG | 0.573883 | 1.2:+62638784 | None:intergenic |
GAACAAGAGGGGACATCCTG+TGG | 0.574752 | 1.2:-62638886 | MS.gene07513:CDS |
TCAAATGGAAGTAATTGTGA+CGG | 0.574962 | 1.2:-62644687 | MS.gene07513:CDS |
CAACTTGAAAACCATCTGCA+TGG | 0.575234 | 1.2:+62644840 | None:intergenic |
TAGCAGGACTGCAGAACTTG+GGG | 0.576248 | 1.2:-62642558 | MS.gene07513:CDS |
TTGATGGCCGGAGAAGATGA+TGG | 0.576343 | 1.2:-62645945 | MS.gene07513:CDS |
TATGGGAAAGGCTGTTGGGA+TGG | 0.576501 | 1.2:-62644599 | MS.gene07513:intron |
AGGTATGTTGGGCATTGTGA+TGG | 0.577486 | 1.2:-62644813 | MS.gene07513:CDS |
AGGAAGTCGCAAATGAGTGT+TGG | 0.577729 | 1.2:-62640730 | MS.gene07513:CDS |
GTTGCACCACGTGCGTTCAA+GGG | 0.578428 | 1.2:-62642228 | MS.gene07513:CDS |
TATCTTCAAGTGAACAGTAT+CGG | 0.578627 | 1.2:+62644749 | None:intergenic |
ATTGATACAGATGATCTTGG+AGG | 0.579531 | 1.2:+62642715 | None:intergenic |
GGAGAATGCAAACTTGGCAA+TGG | 0.580595 | 1.2:-62643151 | MS.gene07513:CDS |
TAGTCTTTATCCTCTTCCAA+TGG | 0.580945 | 1.2:+62644642 | None:intergenic |
TATTCATCGACCATTGGAAG+AGG | 0.581116 | 1.2:-62644652 | MS.gene07513:CDS |
CGATTTGCTCCACAATTCAG+TGG | 0.583237 | 1.2:-62642195 | MS.gene07513:CDS |
ATGTACATATGTCTCAATGT+TGG | 0.584427 | 1.2:+62639056 | None:intergenic |
AACCATTACGGTGGTTTAGG+TGG | 0.584463 | 1.2:-62638264 | MS.gene07513:CDS |
TTCCTCAACAAGTATGGGAA+AGG | 0.585591 | 1.2:-62644611 | MS.gene07513:CDS |
TTACATTGAAATGAAGGACT+CGG | 0.585855 | 1.2:-62640768 | MS.gene07513:CDS |
TAGCTGTGAGCCCATTGACA+AGG | 0.586420 | 1.2:-62638821 | MS.gene07513:CDS |
TTGAAAACCATCTGCATGGG+TGG | 0.588368 | 1.2:+62644844 | None:intergenic |
TGTCATTGTCCGGGTGACAG+TGG | 0.589052 | 1.2:+62640309 | None:intergenic |
ACTGTGACTGTCCTGAAGCA+TGG | 0.592033 | 1.2:-62640241 | MS.gene07513:CDS |
GACGGCTTCAGACCAGACAT+TGG | 0.593889 | 1.2:-62643172 | MS.gene07513:CDS |
ATTCAGCAAGTGGTGGAGTG+TGG | 0.594255 | 1.2:+62642497 | None:intergenic |
TTGGAAAGATGACTCTCCAC+AGG | 0.597434 | 1.2:+62638870 | None:intergenic |
TAGGTACTGCCCTCAATGCA+AGG | 0.598022 | 1.2:-62638490 | MS.gene07513:CDS |
GGCTCCACTCTTGAGTCGAT+AGG | 0.599098 | 1.2:+62639964 | None:intergenic |
ACAGTCACAGTGTACGGCAT+GGG | 0.599364 | 1.2:+62640253 | None:intergenic |
AAATGAAGGACTCGGATGGT+AGG | 0.599838 | 1.2:-62640760 | MS.gene07513:CDS |
TTCTTCCAAATAAGTAACCA+AGG | 0.600475 | 1.2:+62639095 | None:intergenic |
AACTTGAAAACCATCTGCAT+GGG | 0.604037 | 1.2:+62644841 | None:intergenic |
ACTGACCAGCAATCTTCTGA+TGG | 0.604191 | 1.2:-62644780 | MS.gene07513:CDS |
CTACCAAGAAACTGGACTTG+TGG | 0.605316 | 1.2:-62638455 | MS.gene07513:CDS |
ACTTTGCACCAGAGAACAAG+AGG | 0.606165 | 1.2:-62638899 | MS.gene07513:CDS |
GCATTACACTGCATATGCTA+AGG | 0.606988 | 1.2:-62638238 | MS.gene07513:intron |
AGTTGATTGATGATAATAAG+TGG | 0.607365 | 1.2:-62638070 | MS.gene07513:CDS |
TCACAGTGAACCGAGGAACC+CGG | 0.607659 | 1.2:-62638923 | MS.gene07513:CDS |
CAATCACCTTTAGATTAAGT+GGG | 0.608336 | 1.2:+62644183 | None:intergenic |
TGAATGCACACCAGAATGAG+AGG | 0.609087 | 1.2:+62642771 | None:intergenic |
AAAGGTTATACACATAGGAT+GGG | 0.610075 | 1.2:+62638298 | None:intergenic |
TTACAATTGTCTAGGTACAA+AGG | 0.610376 | 1.2:-62644272 | MS.gene07513:intron |
ATGTTCACTGAACAGTGGGA+AGG | 0.611843 | 1.2:-62639145 | MS.gene07513:intron |
CGGGTGACAGTGGAAGGAAG+TGG | 0.612301 | 1.2:+62640319 | None:intergenic |
TGATGGCCGGAGAAGATGAT+GGG | 0.613989 | 1.2:-62645944 | MS.gene07513:CDS |
GACAGTCACAGTGTACGGCA+TGG | 0.613993 | 1.2:+62640252 | None:intergenic |
GAGAAGATGATGGGGAGCAG+CGG | 0.621724 | 1.2:-62645935 | MS.gene07513:CDS |
TGCATAAAGGTTATACACAT+AGG | 0.622320 | 1.2:+62638293 | None:intergenic |
TCAAATCCAGATTGTGAATG+GGG | 0.623330 | 1.2:+62638346 | None:intergenic |
GTGGCCTATCGACTCAAGAG+TGG | 0.623354 | 1.2:-62639968 | MS.gene07513:CDS |
AAGGTGGACCAGCATTGCCA+AGG | 0.624449 | 1.2:-62644253 | MS.gene07513:CDS |
ACACTAGTTTGTCCTGAATG+TGG | 0.624818 | 1.2:-62640385 | MS.gene07513:CDS |
ACAGTGGGAAGGGTGGAGAG+AGG | 0.626561 | 1.2:-62639134 | MS.gene07513:intron |
CACATGTCATCTGGTCCTAG+AGG | 0.629509 | 1.2:+62638610 | None:intergenic |
CTTCAACTAAGTCTCATGAA+GGG | 0.631995 | 1.2:-62639002 | MS.gene07513:CDS |
ATCATCTGTATCAATTGCAG+GGG | 0.637469 | 1.2:-62642707 | MS.gene07513:CDS |
ACCGAAGCAGTACAGCATTG+AGG | 0.637486 | 1.2:-62644210 | MS.gene07513:CDS |
TGGTTATAACCACTGAATTG+TGG | 0.641543 | 1.2:+62642186 | None:intergenic |
GAAACTGGTTTCATCTCAGG+TGG | 0.641699 | 1.2:-62638976 | MS.gene07513:CDS |
TCACTGAACAGTGGGAAGGG+TGG | 0.648017 | 1.2:-62639141 | MS.gene07513:intron |
TCTTCCAAATAAGTAACCAA+GGG | 0.649627 | 1.2:+62639096 | None:intergenic |
CTCTAGGACCAGATGACATG+TGG | 0.653845 | 1.2:-62638609 | MS.gene07513:intron |
GTCTATAGTGGTGAAAGAGG+TGG | 0.657063 | 1.2:-62642583 | MS.gene07513:CDS |
ATTGAAATGAAGGACTCGGA+TGG | 0.658538 | 1.2:-62640764 | MS.gene07513:CDS |
TAAAGGAGTAGAACAGCACA+AGG | 0.658863 | 1.2:-62643338 | MS.gene07513:intron |
GCAATCAGCAACCATTACGG+TGG | 0.659658 | 1.2:-62638273 | MS.gene07513:CDS |
TAGCTCATAGAGTTCACTCA+AGG | 0.664124 | 1.2:+62643372 | None:intergenic |
CAATTGTCTAGGTACAAAGG+TGG | 0.670376 | 1.2:-62644269 | MS.gene07513:intron |
TCAGAATTATCAATTGGACC+GGG | 0.676607 | 1.2:+62644717 | None:intergenic |
TGCAACAGCAGTTCGCCCAG+AGG | 0.677930 | 1.2:+62642245 | None:intergenic |
CTAATTCTCACAGTGAACCG+AGG | 0.686154 | 1.2:-62638930 | MS.gene07513:CDS |
TTCTTGACCGAAGAACCTCT+AGG | 0.686595 | 1.2:-62638625 | MS.gene07513:CDS |
CTTTGCACCAGAGAACAAGA+GGG | 0.690692 | 1.2:-62638898 | MS.gene07513:CDS |
GAGTGACCATTAGACAAGGT+AGG | 0.713316 | 1.2:+62642682 | None:intergenic |
TTACAGCGATGAGATCAACA+TGG | 0.715649 | 1.2:-62642461 | MS.gene07513:CDS |
GATGGCCGGAGAAGATGATG+GGG | 0.717601 | 1.2:-62645943 | MS.gene07513:CDS |
TCATCTGTATCAATTGCAGG+GGG | 0.722106 | 1.2:-62642706 | MS.gene07513:CDS |
GTGAATGGGGAAGTTCACAA+AGG | 0.723784 | 1.2:+62638359 | None:intergenic |
TTGAAGATAACTGATAGACC+CGG | 0.726861 | 1.2:-62644735 | MS.gene07513:CDS |
TTTGCACCAGAGAACAAGAG+GGG | 0.735618 | 1.2:-62638897 | MS.gene07513:CDS |
ACTTGAGTGACCATTAGACA+AGG | 0.740534 | 1.2:+62642678 | None:intergenic |
ATGGGGAGCAGCGGTCACTG+AGG | 0.751068 | 1.2:-62645926 | MS.gene07513:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 62637947 | 62645970 | 62637947 | ID=MS.gene07513 |
chr1.2 | mRNA | 62637947 | 62645970 | 62637947 | ID=MS.gene07513.t1;Parent=MS.gene07513 |
chr1.2 | exon | 62645908 | 62645970 | 62645908 | ID=MS.gene07513.t1.exon1;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62645908 | 62645970 | 62645908 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62644600 | 62644895 | 62644600 | ID=MS.gene07513.t1.exon2;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62644600 | 62644895 | 62644600 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62644139 | 62644280 | 62644139 | ID=MS.gene07513.t1.exon3;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62644139 | 62644280 | 62644139 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62643339 | 62643398 | 62643339 | ID=MS.gene07513.t1.exon4;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62643339 | 62643398 | 62643339 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62643143 | 62643238 | 62643143 | ID=MS.gene07513.t1.exon5;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62643143 | 62643238 | 62643143 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62642441 | 62642827 | 62642441 | ID=MS.gene07513.t1.exon6;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62642441 | 62642827 | 62642441 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62642173 | 62642313 | 62642173 | ID=MS.gene07513.t1.exon7;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62642173 | 62642313 | 62642173 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62640682 | 62640852 | 62640682 | ID=MS.gene07513.t1.exon8;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62640682 | 62640852 | 62640682 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62640165 | 62640422 | 62640165 | ID=MS.gene07513.t1.exon9;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62640165 | 62640422 | 62640165 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62639923 | 62640068 | 62639923 | ID=MS.gene07513.t1.exon10;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62639923 | 62640068 | 62639923 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62638610 | 62639152 | 62638610 | ID=MS.gene07513.t1.exon11;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62638610 | 62639152 | 62638610 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62638239 | 62638509 | 62638239 | ID=MS.gene07513.t1.exon12;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62638239 | 62638509 | 62638239 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
chr1.2 | exon | 62637947 | 62638090 | 62637947 | ID=MS.gene07513.t1.exon13;Parent=MS.gene07513.t1 |
chr1.2 | CDS | 62637947 | 62638090 | 62637947 | ID=cds.MS.gene07513.t1;Parent=MS.gene07513.t1 |
Gene Sequence |
Protein sequence |