Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08966.t1 | KEH20651.1 | 94.1 | 271 | 16 | 0 | 1 | 271 | 1 | 271 | 1.40E-146 | 528.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08966.t1 | Q9LIS1 | 39.2 | 268 | 146 | 8 | 1 | 266 | 164 | 416 | 1.3e-42 | 174.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08966.t1 | B7FLT1 | 94.1 | 271 | 16 | 0 | 1 | 271 | 48 | 318 | 1.0e-146 | 528.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050581 | MS.gene08966 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene060799 | MS.gene08966 | 0.823573 | 1.29E-53 | -1.69E-46 |
| MS.gene060800 | MS.gene08966 | 0.830567 | 2.73E-55 | -1.69E-46 |
| MS.gene060801 | MS.gene08966 | 0.841556 | 4.42E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08966 | MS.gene060401 | PPI |
| MS.gene013088 | MS.gene08966 | PPI |
| MS.gene08966 | MS.gene73339 | PPI |
| MS.gene08966 | MS.gene020442 | PPI |
| MS.gene08966 | MS.gene37919 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08966.t1 | MTR_8g081600 | 94.096 | 271 | 16 | 0 | 1 | 271 | 1 | 271 | 0.0 | 523 |
| MS.gene08966.t1 | MTR_2g036780 | 36.162 | 271 | 156 | 6 | 1 | 260 | 164 | 428 | 1.50e-43 | 153 |
| MS.gene08966.t1 | MTR_1g035890 | 33.582 | 268 | 165 | 5 | 1 | 260 | 165 | 427 | 1.23e-41 | 148 |
| MS.gene08966.t1 | MTR_3g100150 | 32.222 | 270 | 171 | 6 | 1 | 261 | 163 | 429 | 1.47e-40 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08966.t1 | AT3G23840 | 39.179 | 268 | 146 | 8 | 1 | 266 | 164 | 416 | 6.32e-46 | 159 |
| MS.gene08966.t1 | AT4G13840 | 33.457 | 269 | 168 | 6 | 1 | 266 | 166 | 426 | 6.11e-43 | 151 |
| MS.gene08966.t1 | AT4G24510 | 30.418 | 263 | 166 | 6 | 1 | 260 | 168 | 416 | 9.88e-38 | 137 |
Find 74 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACTTGCAAGAACAAATT+TGG | 0.140491 | 4.4:-14808676 | MS.gene08966:CDS |
| TGACACTAGTTTGAAAATTT+TGG | 0.151455 | 4.4:-14808456 | MS.gene08966:CDS |
| GTCTCAACACCCCTTAATTT+TGG | 0.157335 | 4.4:-14808815 | MS.gene08966:CDS |
| AAACTTTATGTGCAATAATT+TGG | 0.180735 | 4.4:-14808622 | MS.gene08966:CDS |
| CTTCAGATTTCATCAACTTA+TGG | 0.205690 | 4.4:-14808892 | MS.gene08966:CDS |
| GTTCTTGCAAGTTGTTCATT+AGG | 0.260077 | 4.4:+14808684 | None:intergenic |
| TTCAGATTTCATCAACTTAT+GGG | 0.298539 | 4.4:-14808891 | MS.gene08966:CDS |
| TGGTAGGGGCAATGATATAA+TGG | 0.301115 | 4.4:-14808531 | MS.gene08966:CDS |
| TGATGAAAGAAATCAAATTA+TGG | 0.305939 | 4.4:-14808408 | MS.gene08966:CDS |
| ATATCATTGCCCCTACCATT+AGG | 0.319594 | 4.4:+14808536 | None:intergenic |
| TTCTTGCAAGTTGTTCATTA+GGG | 0.331603 | 4.4:+14808685 | None:intergenic |
| TGTGTATGACTTAAAATTAA+AGG | 0.335448 | 4.4:-14808303 | MS.gene08966:CDS |
| GGGAGATGAAGGTGTTGTTT+TGG | 0.345479 | 4.4:-14808240 | MS.gene08966:CDS |
| TTCATCTTCTGGCAATATAA+TGG | 0.352304 | 4.4:+14808178 | None:intergenic |
| TTGACCCGGTTGGTGATCAT+TGG | 0.353117 | 4.4:-14808760 | MS.gene08966:CDS |
| CAACTTGCAAGAACAAATTT+GGG | 0.358829 | 4.4:-14808675 | MS.gene08966:CDS |
| TATCATTGCCCCTACCATTA+GGG | 0.360008 | 4.4:+14808537 | None:intergenic |
| AACTGTCACGGTTGTGGGTT+CGG | 0.365252 | 4.4:+14808571 | None:intergenic |
| AGGAACCAGCTACATTTAAA+CGG | 0.370152 | 4.4:-14808784 | MS.gene08966:CDS |
| TAAGTCAAGAAATGTCAAAT+TGG | 0.372854 | 4.4:+14808337 | None:intergenic |
| AGGGGTGTTGAGACGGATCT+TGG | 0.389004 | 4.4:+14808824 | None:intergenic |
| TATATTGCCAGAAGATGAAA+TGG | 0.399380 | 4.4:-14808174 | MS.gene08966:CDS |
| TTTGTTTACTACACACTTCA+AGG | 0.403996 | 4.4:-14808266 | MS.gene08966:CDS |
| AGTGTGTAGTAAACAAATCT+TGG | 0.405045 | 4.4:+14808272 | None:intergenic |
| GTGTATGACTTAAAATTAAA+GGG | 0.419239 | 4.4:-14808302 | MS.gene08966:CDS |
| GTTCGGATCCTTCTCGAACT+CGG | 0.421086 | 4.4:+14808588 | None:intergenic |
| TCGACAAACTGTCACGGTTG+TGG | 0.425168 | 4.4:+14808565 | None:intergenic |
| GGTAGGGGCAATGATATAAT+GGG | 0.427066 | 4.4:-14808530 | MS.gene08966:CDS |
| ATTGCACATAAAGTTTCAAA+TGG | 0.442525 | 4.4:+14808629 | None:intergenic |
| CACATAAAGTTTCAAATGGA+GGG | 0.442722 | 4.4:+14808633 | None:intergenic |
| CGACAAACTGTCACGGTTGT+GGG | 0.445047 | 4.4:+14808566 | None:intergenic |
| GGAACCAGCTACATTTAAAC+GGG | 0.448779 | 4.4:-14808783 | MS.gene08966:CDS |
| CCTAAGGTGAATGATATTGA+TGG | 0.452041 | 4.4:-14808212 | MS.gene08966:CDS |
| TTCGGATCCTTCTCGAACTC+GGG | 0.459230 | 4.4:+14808589 | None:intergenic |
| CCTCAACCTTGCATATCAAT+TGG | 0.459576 | 4.4:+14808501 | None:intergenic |
| GCTAGCATGCTTGTGGATCA+AGG | 0.466138 | 4.4:-14808434 | MS.gene08966:CDS |
| AAATCCGAGCTTAATGTGTA+TGG | 0.468103 | 4.4:-14808143 | MS.gene08966:CDS |
| CTTCAAGGGGTGGGAGATGA+AGG | 0.469388 | 4.4:-14808251 | MS.gene08966:CDS |
| CCATCAATATCATTCACCTT+AGG | 0.474137 | 4.4:+14808212 | None:intergenic |
| GGGATCCAATGATCACCAAC+CGG | 0.475921 | 4.4:+14808755 | None:intergenic |
| GACGGATCTTGGAATGTTGA+AGG | 0.485139 | 4.4:+14808835 | None:intergenic |
| GGAGGGGTTTGTTCAACACT+TGG | 0.494342 | 4.4:+14808650 | None:intergenic |
| TACATTTAAACGGGTTGACC+CGG | 0.497184 | 4.4:-14808774 | MS.gene08966:CDS |
| GTTTGTCGACCCGACCCTAA+TGG | 0.497568 | 4.4:-14808551 | MS.gene08966:CDS |
| TCAACCCGTTTAAATGTAGC+TGG | 0.502437 | 4.4:+14808779 | None:intergenic |
| TTGATATGCAAGGTTGAGGC+AGG | 0.515574 | 4.4:-14808497 | MS.gene08966:CDS |
| GCACATAAAGTTTCAAATGG+AGG | 0.536084 | 4.4:+14808632 | None:intergenic |
| TACTACACACTTCAAGGGGT+GGG | 0.539191 | 4.4:-14808260 | MS.gene08966:CDS |
| TCGACCCGACCCTAATGGTA+GGG | 0.545566 | 4.4:-14808546 | MS.gene08966:CDS |
| TTGTTTACTACACACTTCAA+GGG | 0.547045 | 4.4:-14808265 | MS.gene08966:CDS |
| GTGTATGGTATCATGTTTGA+GGG | 0.549776 | 4.4:-14808128 | MS.gene08966:CDS |
| TTGCCCCTACCATTAGGGTC+GGG | 0.551150 | 4.4:+14808542 | None:intergenic |
| ACATAAAGTTTCAAATGGAG+GGG | 0.558070 | 4.4:+14808634 | None:intergenic |
| ATTGCCCCTACCATTAGGGT+CGG | 0.561243 | 4.4:+14808541 | None:intergenic |
| TGTGTATGGTATCATGTTTG+AGG | 0.561998 | 4.4:-14808129 | MS.gene08966:CDS |
| AAAATTAAGGGGTGTTGAGA+CGG | 0.562724 | 4.4:+14808817 | None:intergenic |
| CCAATTGATATGCAAGGTTG+AGG | 0.574004 | 4.4:-14808501 | MS.gene08966:CDS |
| TCAGATTTCATCAACTTATG+GGG | 0.579204 | 4.4:-14808890 | MS.gene08966:CDS |
| TCATTAGGGAGCTAGTTATG+TGG | 0.584575 | 4.4:+14808699 | None:intergenic |
| ATGAAATCTGAAGCTGAATG+TGG | 0.593595 | 4.4:+14808902 | None:intergenic |
| GTCGACCCGACCCTAATGGT+AGG | 0.594252 | 4.4:-14808547 | MS.gene08966:CDS |
| TTTAAACGGGTTGACCCGGT+TGG | 0.594712 | 4.4:-14808770 | MS.gene08966:CDS |
| GGATCCAATGATCACCAACC+GGG | 0.601111 | 4.4:+14808756 | None:intergenic |
| TTACTACACACTTCAAGGGG+TGG | 0.606615 | 4.4:-14808261 | MS.gene08966:CDS |
| CGACCCGACCCTAATGGTAG+GGG | 0.607530 | 4.4:-14808545 | MS.gene08966:CDS |
| ACGGATCTTGGAATGTTGAA+GGG | 0.614481 | 4.4:+14808836 | None:intergenic |
| TGTTTACTACACACTTCAAG+GGG | 0.616578 | 4.4:-14808264 | MS.gene08966:CDS |
| TAGGGAGCTAGTTATGTGGA+AGG | 0.620633 | 4.4:+14808703 | None:intergenic |
| TGCATAGCCCGAGTTCGAGA+AGG | 0.625715 | 4.4:-14808596 | MS.gene08966:CDS |
| GATACCATACACATTAAGCT+CGG | 0.633143 | 4.4:+14808139 | None:intergenic |
| AAATGACCAATTGATATGCA+AGG | 0.646231 | 4.4:-14808507 | MS.gene08966:CDS |
| AACTTGCAAGAACAAATTTG+GGG | 0.669322 | 4.4:-14808674 | MS.gene08966:CDS |
| GTCGGGTCGACAAACTGTCA+CGG | 0.691405 | 4.4:+14808559 | None:intergenic |
| TGAAATCTGAAGCTGAATGT+GGG | 0.702970 | 4.4:+14808903 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTTTATGTGCAATAATT+TGG | - | chr4.4:14808407-14808426 | MS.gene08966:CDS | 20.0% |
| !! | ATATAGTAGAAAAAGATCAA+GGG | - | chr4.4:14808644-14808663 | MS.gene08966:CDS | 20.0% |
| !! | GTGTATGACTTAAAATTAAA+GGG | - | chr4.4:14808727-14808746 | MS.gene08966:CDS | 20.0% |
| !! | TGATGAAAGAAATCAAATTA+TGG | - | chr4.4:14808621-14808640 | MS.gene08966:CDS | 20.0% |
| !! | TGTGTATGACTTAAAATTAA+AGG | - | chr4.4:14808726-14808745 | MS.gene08966:CDS | 20.0% |
| ! | ATTGCACATAAAGTTTCAAA+TGG | + | chr4.4:14808403-14808422 | None:intergenic | 25.0% |
| ! | GATATAGTAGAAAAAGATCA+AGG | - | chr4.4:14808643-14808662 | MS.gene08966:CDS | 25.0% |
| ! | TAAGTCAAGAAATGTCAAAT+TGG | + | chr4.4:14808695-14808714 | None:intergenic | 25.0% |
| ! | TATAGTAGAAAAAGATCAAG+GGG | - | chr4.4:14808645-14808664 | MS.gene08966:CDS | 25.0% |
| ! | TTCAGATTTCATCAACTTAT+GGG | - | chr4.4:14808138-14808157 | MS.gene08966:CDS | 25.0% |
| !!! | TGACACTAGTTTGAAAATTT+TGG | - | chr4.4:14808573-14808592 | MS.gene08966:CDS | 25.0% |
| AAATGACCAATTGATATGCA+AGG | - | chr4.4:14808522-14808541 | MS.gene08966:CDS | 30.0% | |
| AACTTGCAAGAACAAATTTG+GGG | - | chr4.4:14808355-14808374 | MS.gene08966:CDS | 30.0% | |
| ACAACTTGCAAGAACAAATT+TGG | - | chr4.4:14808353-14808372 | MS.gene08966:CDS | 30.0% | |
| ACATAAAGTTTCAAATGGAG+GGG | + | chr4.4:14808398-14808417 | None:intergenic | 30.0% | |
| AGTGTGTAGTAAACAAATCT+TGG | + | chr4.4:14808760-14808779 | None:intergenic | 30.0% | |
| CAACTTGCAAGAACAAATTT+GGG | - | chr4.4:14808354-14808373 | MS.gene08966:CDS | 30.0% | |
| CACATAAAGTTTCAAATGGA+GGG | + | chr4.4:14808399-14808418 | None:intergenic | 30.0% | |
| CTTCAGATTTCATCAACTTA+TGG | - | chr4.4:14808137-14808156 | MS.gene08966:CDS | 30.0% | |
| TATATTGCCAGAAGATGAAA+TGG | - | chr4.4:14808855-14808874 | MS.gene08966:CDS | 30.0% | |
| TCAGATTTCATCAACTTATG+GGG | - | chr4.4:14808139-14808158 | MS.gene08966:CDS | 30.0% | |
| TTCATCTTCTGGCAATATAA+TGG | + | chr4.4:14808854-14808873 | None:intergenic | 30.0% | |
| TTCTTGCAAGTTGTTCATTA+GGG | + | chr4.4:14808347-14808366 | None:intergenic | 30.0% | |
| TTGTTTACTACACACTTCAA+GGG | - | chr4.4:14808764-14808783 | MS.gene08966:CDS | 30.0% | |
| TTTGTTTACTACACACTTCA+AGG | - | chr4.4:14808763-14808782 | MS.gene08966:CDS | 30.0% | |
| ! | AGTTTTTCCATTTCATCTTC+TGG | + | chr4.4:14808865-14808884 | None:intergenic | 30.0% |
| ! | CTTTTCGGATCCAAAATTAA+GGG | + | chr4.4:14808227-14808246 | None:intergenic | 30.0% |
| ! | TTTTAGGCTCAAATTGTTCA+AGG | + | chr4.4:14808170-14808189 | None:intergenic | 30.0% |
| ! | TTTTCGGATCCAAAATTAAG+GGG | + | chr4.4:14808226-14808245 | None:intergenic | 30.0% |
| !!! | GTGACTGATTTTTTTGTCTA+TGG | - | chr4.4:14808667-14808686 | MS.gene08966:CDS | 30.0% |
| !!! | TGTGTCCATTTTTTTGTTGT+TGG | + | chr4.4:14808302-14808321 | None:intergenic | 30.0% |
| AAATCCGAGCTTAATGTGTA+TGG | - | chr4.4:14808886-14808905 | MS.gene08966:CDS | 35.0% | |
| AGGAACCAGCTACATTTAAA+CGG | - | chr4.4:14808245-14808264 | MS.gene08966:CDS | 35.0% | |
| CCATCAATATCATTCACCTT+AGG | + | chr4.4:14808820-14808839 | None:intergenic | 35.0% | |
| CCTAAGGTGAATGATATTGA+TGG | - | chr4.4:14808817-14808836 | MS.gene08966:CDS | 35.0% | |
| GATACCATACACATTAAGCT+CGG | + | chr4.4:14808893-14808912 | None:intergenic | 35.0% | |
| GCACATAAAGTTTCAAATGG+AGG | + | chr4.4:14808400-14808419 | None:intergenic | 35.0% | |
| GTGTATGGTATCATGTTTGA+GGG | - | chr4.4:14808901-14808920 | MS.gene08966:CDS | 35.0% | |
| GTTCTTGCAAGTTGTTCATT+AGG | + | chr4.4:14808348-14808367 | None:intergenic | 35.0% | |
| TGTGTATGGTATCATGTTTG+AGG | - | chr4.4:14808900-14808919 | MS.gene08966:CDS | 35.0% | |
| TGTTTACTACACACTTCAAG+GGG | - | chr4.4:14808765-14808784 | MS.gene08966:CDS | 35.0% | |
| ! | ATGAAATCTGAAGCTGAATG+TGG | + | chr4.4:14808130-14808149 | None:intergenic | 35.0% |
| ! | CCTTAATTTTGGATCCGAAA+AGG | - | chr4.4:14808225-14808244 | MS.gene08966:CDS | 35.0% |
| ! | CCTTTTCGGATCCAAAATTA+AGG | + | chr4.4:14808228-14808247 | None:intergenic | 35.0% |
| ! | TGAAATCTGAAGCTGAATGT+GGG | + | chr4.4:14808129-14808148 | None:intergenic | 35.0% |
| !! | AAAATTAAGGGGTGTTGAGA+CGG | + | chr4.4:14808215-14808234 | None:intergenic | 35.0% |
| !! | AAATGTAGCTGGTTCCTTTT+CGG | + | chr4.4:14808242-14808261 | None:intergenic | 35.0% |
| !!! | CCATTTTTTTGTTGTTGGCT+GGG | + | chr4.4:14808297-14808316 | None:intergenic | 35.0% |
| !!! | TCCATTTTTTTGTTGTTGGC+TGG | + | chr4.4:14808298-14808317 | None:intergenic | 35.0% |
| ACGGATCTTGGAATGTTGAA+GGG | + | chr4.4:14808196-14808215 | None:intergenic | 40.0% | |
| ATATCATTGCCCCTACCATT+AGG | + | chr4.4:14808496-14808515 | None:intergenic | 40.0% | |
| CCAATTGATATGCAAGGTTG+AGG | - | chr4.4:14808528-14808547 | MS.gene08966:CDS | 40.0% | |
| CCCAGCCAACAACAAAAAAA+TGG | - | chr4.4:14808294-14808313 | MS.gene08966:CDS | 40.0% | |
| CCTCAACCTTGCATATCAAT+TGG | + | chr4.4:14808531-14808550 | None:intergenic | 40.0% | |
| GGAACCAGCTACATTTAAAC+GGG | - | chr4.4:14808246-14808265 | MS.gene08966:CDS | 40.0% | |
| GGTAGGGGCAATGATATAAT+GGG | - | chr4.4:14808499-14808518 | MS.gene08966:CDS | 40.0% | |
| TATCATTGCCCCTACCATTA+GGG | + | chr4.4:14808495-14808514 | None:intergenic | 40.0% | |
| TCAACCCGTTTAAATGTAGC+TGG | + | chr4.4:14808253-14808272 | None:intergenic | 40.0% | |
| TCATTAGGGAGCTAGTTATG+TGG | + | chr4.4:14808333-14808352 | None:intergenic | 40.0% | |
| TGGTAGGGGCAATGATATAA+TGG | - | chr4.4:14808498-14808517 | MS.gene08966:CDS | 40.0% | |
| ! | GAATGTTGAAGGGCAGTTTT+AGG | + | chr4.4:14808186-14808205 | None:intergenic | 40.0% |
| ! | GTCTCAACACCCCTTAATTT+TGG | - | chr4.4:14808214-14808233 | MS.gene08966:CDS | 40.0% |
| !! | TACATTTAAACGGGTTGACC+CGG | - | chr4.4:14808255-14808274 | MS.gene08966:CDS | 40.0% |
| !!! | AATTTTGGCTAGCATGCTTG+TGG | - | chr4.4:14808588-14808607 | MS.gene08966:CDS | 40.0% |
| !!! | TGTTGTTTTGGTGCTTCCTA+AGG | - | chr4.4:14808801-14808820 | MS.gene08966:CDS | 40.0% |
| GACGGATCTTGGAATGTTGA+AGG | + | chr4.4:14808197-14808216 | None:intergenic | 45.0% | |
| TACTACACACTTCAAGGGGT+GGG | - | chr4.4:14808769-14808788 | MS.gene08966:CDS | 45.0% | |
| TAGGGAGCTAGTTATGTGGA+AGG | + | chr4.4:14808329-14808348 | None:intergenic | 45.0% | |
| TTACTACACACTTCAAGGGG+TGG | - | chr4.4:14808768-14808787 | MS.gene08966:CDS | 45.0% | |
| TTGATATGCAAGGTTGAGGC+AGG | - | chr4.4:14808532-14808551 | MS.gene08966:CDS | 45.0% | |
| !!! | GGGAGATGAAGGTGTTGTTT+TGG | - | chr4.4:14808789-14808808 | MS.gene08966:CDS | 45.0% |
| AACTGTCACGGTTGTGGGTT+CGG | + | chr4.4:14808461-14808480 | None:intergenic | 50.0% | |
| ATTGCCCCTACCATTAGGGT+CGG | + | chr4.4:14808491-14808510 | None:intergenic | 50.0% | |
| CGACAAACTGTCACGGTTGT+GGG | + | chr4.4:14808466-14808485 | None:intergenic | 50.0% | |
| GCTAGCATGCTTGTGGATCA+AGG | - | chr4.4:14808595-14808614 | MS.gene08966:CDS | 50.0% | |
| GGATCCAATGATCACCAACC+GGG | + | chr4.4:14808276-14808295 | None:intergenic | 50.0% | |
| GGGATCCAATGATCACCAAC+CGG | + | chr4.4:14808277-14808296 | None:intergenic | 50.0% | |
| GTTCGGATCCTTCTCGAACT+CGG | + | chr4.4:14808444-14808463 | None:intergenic | 50.0% | |
| TCGACAAACTGTCACGGTTG+TGG | + | chr4.4:14808467-14808486 | None:intergenic | 50.0% | |
| TTCGGATCCTTCTCGAACTC+GGG | + | chr4.4:14808443-14808462 | None:intergenic | 50.0% | |
| ! | GGAGGGGTTTGTTCAACACT+TGG | + | chr4.4:14808382-14808401 | None:intergenic | 50.0% |
| !! | TTGACCCGGTTGGTGATCAT+TGG | - | chr4.4:14808269-14808288 | MS.gene08966:CDS | 50.0% |
| !! | TTTAAACGGGTTGACCCGGT+TGG | - | chr4.4:14808259-14808278 | MS.gene08966:CDS | 50.0% |
| CTTCAAGGGGTGGGAGATGA+AGG | - | chr4.4:14808778-14808797 | MS.gene08966:CDS | 55.0% | |
| GTCGGGTCGACAAACTGTCA+CGG | + | chr4.4:14808473-14808492 | None:intergenic | 55.0% | |
| GTTTGTCGACCCGACCCTAA+TGG | - | chr4.4:14808478-14808497 | MS.gene08966:CDS | 55.0% | |
| TCGACCCGACCCTAATGGTA+GGG | - | chr4.4:14808483-14808502 | MS.gene08966:CDS | 55.0% | |
| TGCATAGCCCGAGTTCGAGA+AGG | - | chr4.4:14808433-14808452 | MS.gene08966:CDS | 55.0% | |
| TTGCCCCTACCATTAGGGTC+GGG | + | chr4.4:14808490-14808509 | None:intergenic | 55.0% | |
| !! | AGGGGTGTTGAGACGGATCT+TGG | + | chr4.4:14808208-14808227 | None:intergenic | 55.0% |
| CGACCCGACCCTAATGGTAG+GGG | - | chr4.4:14808484-14808503 | MS.gene08966:CDS | 60.0% | |
| GTCGACCCGACCCTAATGGT+AGG | - | chr4.4:14808482-14808501 | MS.gene08966:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 14808118 | 14808933 | 14808118 | ID=MS.gene08966 |
| chr4.4 | mRNA | 14808118 | 14808933 | 14808118 | ID=MS.gene08966.t1;Parent=MS.gene08966 |
| chr4.4 | exon | 14808118 | 14808933 | 14808118 | ID=MS.gene08966.t1.exon1;Parent=MS.gene08966.t1 |
| chr4.4 | CDS | 14808118 | 14808933 | 14808118 | ID=cds.MS.gene08966.t1;Parent=MS.gene08966.t1 |
| Gene Sequence |
| Protein sequence |
