Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09186.t1 | RHN42449.1 | 94.4 | 354 | 20 | 0 | 5 | 358 | 1 | 354 | 1.60E-191 | 678.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09186.t1 | Q8VYP6 | 54.3 | 352 | 145 | 8 | 14 | 358 | 10 | 352 | 8.4e-101 | 368.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09186.t1 | A0A072TT04 | 94.6 | 353 | 19 | 0 | 5 | 357 | 1 | 353 | 1.1e-191 | 678.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene09186 | -0.831818 | 1.35E-55 | -1.69E-46 |
| MS.gene04917 | MS.gene09186 | -0.826782 | 2.25E-54 | -1.69E-46 |
| MS.gene04991 | MS.gene09186 | 0.820083 | 8.27E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene09186 | -0.804002 | 2.66E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene09186 | -0.822425 | 2.38E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene09186 | -0.821744 | 3.43E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene09186 | -0.813928 | 2.00E-51 | -1.69E-46 |
| MS.gene051631 | MS.gene09186 | 0.83488 | 2.32E-56 | -1.69E-46 |
| MS.gene05344 | MS.gene09186 | 0.80853 | 2.96E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene09186 | -0.81703 | 4.07E-52 | -1.69E-46 |
| MS.gene055880 | MS.gene09186 | 0.808126 | 3.61E-50 | -1.69E-46 |
| MS.gene060869 | MS.gene09186 | -0.804822 | 1.80E-49 | -1.69E-46 |
| MS.gene060870 | MS.gene09186 | -0.801403 | 9.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 95 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATAAACAAGTAGGAATT+TGG | 0.234721 | 4.4:-16487228 | None:intergenic |
| AATACTTCTGGCTGGGTTAA+AGG | 0.244134 | 4.4:+16484067 | MS.gene09186:CDS |
| ATTTACCTGCTGGAAAATTC+TGG | 0.277149 | 4.4:+16484332 | MS.gene09186:CDS |
| TCTTGCATCTGGTTGCTAAT+AGG | 0.301989 | 4.4:-16483058 | None:intergenic |
| AATTCCTACTTGTTTATTGC+AGG | 0.309415 | 4.4:+16487231 | MS.gene09186:CDS |
| CGAGATAGATTCAGTTCTTA+AGG | 0.329341 | 4.4:+16484390 | MS.gene09186:CDS |
| CAAACTGAGTTTACTCCTCT+TGG | 0.341189 | 4.4:+16483110 | MS.gene09186:CDS |
| GCTGGAAAATTCTGGTTAGA+TGG | 0.341592 | 4.4:+16484340 | MS.gene09186:CDS |
| ATAAGCTACTTTCTTGCATC+TGG | 0.349894 | 4.4:-16483069 | None:intergenic |
| GCAGCTTGTGACCATTCATC+TGG | 0.352128 | 4.4:-16482939 | None:intergenic |
| CCCCAGGGAGTTTGTTCAAA+AGG | 0.361346 | 4.4:+16484518 | MS.gene09186:intron |
| GTTGATTTGCCAACACTTCC+AGG | 0.361840 | 4.4:-16483011 | None:intergenic |
| AGTACTTGAAACCATCAAAA+AGG | 0.368009 | 4.4:+16483275 | MS.gene09186:CDS |
| TGGTTGCTAATAGGAGATTA+AGG | 0.374760 | 4.4:-16483049 | None:intergenic |
| AACACTGATGGATCTATCTT+AGG | 0.381453 | 4.4:-16483944 | None:intergenic |
| CCCACACATGTTGTTAAGAT+AGG | 0.383733 | 4.4:+16484280 | MS.gene09186:CDS |
| CCTCTTATAGTGAATACTTC+TGG | 0.384908 | 4.4:+16484055 | MS.gene09186:CDS |
| TCATCTGGGATGAAAATATC+TGG | 0.385934 | 4.4:-16482924 | None:intergenic |
| AGCCAACAATACTAGCATTC+AGG | 0.392276 | 4.4:-16485116 | None:intergenic |
| TTACCCTGGTGCCTTGGTCT+TGG | 0.393880 | 4.4:+16485168 | MS.gene09186:CDS |
| GTCGTACTCGTTTGTGGACC+TGG | 0.396974 | 4.4:+16482993 | MS.gene09186:CDS |
| CCAGAAGTATTCACTATAAG+AGG | 0.406197 | 4.4:-16484055 | None:intergenic |
| GGCCTGAATGCTAGTATTGT+TGG | 0.412902 | 4.4:+16485114 | MS.gene09186:CDS |
| TTATAGTGAATACTTCTGGC+TGG | 0.413967 | 4.4:+16484059 | MS.gene09186:CDS |
| GTGGACATGCTAAAATATAT+TGG | 0.414066 | 4.4:+16484256 | MS.gene09186:CDS |
| CCAGGACAGCTCTGTTCAAC+CGG | 0.418824 | 4.4:-16488059 | None:intergenic |
| CAAGAGGAGTAAACTCAGTT+TGG | 0.425282 | 4.4:-16483109 | None:intergenic |
| TACGACGGGAGGCGTTGAAC+TGG | 0.430588 | 4.4:-16482976 | None:intergenic |
| CCGGTTGAACAGAGCTGTCC+TGG | 0.433832 | 4.4:+16488059 | MS.gene09186:CDS |
| AAAAGTCAACCTCTTGCTAC+AGG | 0.438339 | 4.4:+16487198 | MS.gene09186:CDS |
| CCTGCGTGGCGAACGGATAG+TGG | 0.442876 | 4.4:+16484551 | MS.gene09186:CDS |
| CCGTAGAATATTTCAGAGCT+TGG | 0.444402 | 4.4:-16485093 | None:intergenic |
| CCTCCCGTCGTACTCGTTTG+TGG | 0.446281 | 4.4:+16482987 | MS.gene09186:CDS |
| GGAGATTTACCCTGGTGCCT+TGG | 0.462451 | 4.4:+16485162 | MS.gene09186:CDS |
| CGAATCTTTATGCTTGCAAT+GGG | 0.463513 | 4.4:-16484666 | None:intergenic |
| TGTTGGTTATGAAGTATTAG+TGG | 0.466461 | 4.4:+16484237 | MS.gene09186:CDS |
| CGTAGAATATTTCAGAGCTT+GGG | 0.466484 | 4.4:-16485092 | None:intergenic |
| CTGGAAAATTCTGGTTAGAT+GGG | 0.476615 | 4.4:+16484341 | MS.gene09186:CDS |
| CTTGCAATGGGAACTTGATA+AGG | 0.478521 | 4.4:-16484654 | None:intergenic |
| AAATTTAAGAATTTACCTGC+TGG | 0.484367 | 4.4:+16484322 | MS.gene09186:CDS |
| ATGTGAGAGGCTAGTTGCTC+CGG | 0.495557 | 4.4:+16488040 | MS.gene09186:CDS |
| TTCAGAGAAACAAATGGCAC+AGG | 0.495894 | 4.4:-16487175 | None:intergenic |
| TTTAGCTAGTAGAGAAGGGC+TGG | 0.502072 | 4.4:+16488015 | MS.gene09186:intron |
| CTTACCTGCAATAAACAAGT+AGG | 0.503057 | 4.4:-16487235 | None:intergenic |
| ACAGACAGAGAGACAGCAAT+GGG | 0.510444 | 4.4:+16482888 | None:intergenic |
| CAGCTTGTGACCATTCATCT+GGG | 0.510594 | 4.4:-16482938 | None:intergenic |
| CTCGTCTCCTGCGTGGCGAA+CGG | 0.511504 | 4.4:+16484544 | MS.gene09186:CDS |
| TAGATTCAGTTCTTAAGGAC+CGG | 0.517139 | 4.4:+16484395 | MS.gene09186:CDS |
| TCGAATCTTTATGCTTGCAA+TGG | 0.517870 | 4.4:-16484667 | None:intergenic |
| TGGTTAGATGGGGAAGATGA+TGG | 0.521887 | 4.4:+16484352 | MS.gene09186:CDS |
| CTTAAATTTATAAAATTCAG+TGG | 0.522288 | 4.4:-16484308 | None:intergenic |
| TATAGTGAATACTTCTGGCT+GGG | 0.525760 | 4.4:+16484060 | MS.gene09186:CDS |
| CCTACCAAGACCAAGGCACC+AGG | 0.529524 | 4.4:-16485172 | None:intergenic |
| GTTGTTTACGAAGTTACTCC+AGG | 0.545994 | 4.4:+16483149 | MS.gene09186:CDS |
| CCAAGCTCTGAAATATTCTA+CGG | 0.547357 | 4.4:+16485093 | MS.gene09186:CDS |
| GCCTATCTTAACAACATGTG+TGG | 0.557846 | 4.4:-16484281 | None:intergenic |
| AGGCACCAGGGTAAATCTCC+AGG | 0.558138 | 4.4:-16485159 | None:intergenic |
| GCAGTTGAATCTGAAGTACC+TGG | 0.560619 | 4.4:+16485141 | MS.gene09186:CDS |
| TTCAGATATGTCATCGGACA+AGG | 0.564343 | 4.4:+16484602 | MS.gene09186:CDS |
| GGGATGAAAATATCTGGTGA+AGG | 0.564972 | 4.4:-16482918 | None:intergenic |
| TAGGAGATTAAGGAGATAGC+GGG | 0.565444 | 4.4:-16483039 | None:intergenic |
| AGGGGCATTGACACGGTCAA+AGG | 0.567190 | 4.4:+16487133 | MS.gene09186:CDS |
| GGTCCACAAACGAGTACGAC+GGG | 0.570389 | 4.4:-16482990 | None:intergenic |
| CTTGTGACACAGGAATTGTG+AGG | 0.582422 | 4.4:+16487113 | MS.gene09186:intron |
| ACATACTCTAAGAACACTGA+TGG | 0.583221 | 4.4:-16483956 | None:intergenic |
| GGATGAAAATATCTGGTGAA+GGG | 0.583452 | 4.4:-16482917 | None:intergenic |
| ATAAGGACAGTGAGATGTCA+AGG | 0.584321 | 4.4:-16484637 | None:intergenic |
| CCACTATCCGTTCGCCACGC+AGG | 0.585492 | 4.4:-16484551 | None:intergenic |
| TTGTGACACAGGAATTGTGA+GGG | 0.589012 | 4.4:+16487114 | MS.gene09186:intron |
| CAGGGAGTTTGTTCAAAAGG+AGG | 0.595105 | 4.4:+16484521 | MS.gene09186:intron |
| GGATATCACCCTGTAGCAAG+AGG | 0.602061 | 4.4:-16487207 | None:intergenic |
| ATTAAGGAGATAGCGGGCGA+AGG | 0.607891 | 4.4:-16483033 | None:intergenic |
| CTTAAGATGAACGAACGACC+AGG | 0.608118 | 4.4:-16488077 | None:intergenic |
| GATTCGACATGTTCATCGTG+AGG | 0.617943 | 4.4:+16484683 | MS.gene09186:CDS |
| AGGCGTTGAACTGGATACAA+TGG | 0.618822 | 4.4:-16482967 | None:intergenic |
| CCTATCTTAACAACATGTGT+GGG | 0.620818 | 4.4:-16484280 | None:intergenic |
| GCTTATCTTGATACCGACGT+TGG | 0.626457 | 4.4:+16483086 | MS.gene09186:CDS |
| AAGTACCTGGAGATTTACCC+TGG | 0.626705 | 4.4:+16485154 | MS.gene09186:CDS |
| GTTTGTGGACCTGGAAGTGT+TGG | 0.628940 | 4.4:+16483002 | MS.gene09186:CDS |
| TAGTGATTCAGATATGTCAT+CGG | 0.630930 | 4.4:+16484596 | MS.gene09186:CDS |
| AATTGTGAGGGGCATTGACA+CGG | 0.634135 | 4.4:+16487126 | MS.gene09186:CDS |
| AGAAGGGCTGGCTATGTGAG+AGG | 0.635638 | 4.4:+16488027 | MS.gene09186:CDS |
| AAAGTCAACCTCTTGCTACA+GGG | 0.642893 | 4.4:+16487199 | MS.gene09186:CDS |
| GTTAGAGAGATTAAACCAAG+AGG | 0.643471 | 4.4:-16483125 | None:intergenic |
| TGGAAAATTCTGGTTAGATG+GGG | 0.652558 | 4.4:+16484342 | MS.gene09186:CDS |
| GACAGACAGAGAGACAGCAA+TGG | 0.654238 | 4.4:+16482887 | None:intergenic |
| ATAGGAGATTAAGGAGATAG+CGG | 0.661098 | 4.4:-16483040 | None:intergenic |
| AAGGAGGCTCGTCTCCTGCG+TGG | 0.674748 | 4.4:+16484537 | MS.gene09186:CDS |
| CCACAAACGAGTACGACGGG+AGG | 0.678624 | 4.4:-16482987 | None:intergenic |
| TGTGACACAGGAATTGTGAG+GGG | 0.679439 | 4.4:+16487115 | MS.gene09186:intron |
| GATGACATATCTGAATCACT+AGG | 0.681511 | 4.4:-16484594 | None:intergenic |
| CAAGTTACCTACCAAGACCA+AGG | 0.684244 | 4.4:-16485179 | None:intergenic |
| AGGTCCACAAACGAGTACGA+CGG | 0.697355 | 4.4:-16482991 | None:intergenic |
| AAACTCAGTTTGGCCAACGT+CGG | 0.697748 | 4.4:-16483099 | None:intergenic |
| CTACCAAGACCAAGGCACCA+GGG | 0.712305 | 4.4:-16485171 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTGTTTATTTTTATATAA+AGG | + | chr4.4:16485027-16485046 | MS.gene09186:intron | 10.0% |
| !! | CTTAAATTTATAAAATTCAG+TGG | - | chr4.4:16484311-16484330 | None:intergenic | 15.0% |
| !!! | AAAATATTTGAAATTCAAAG+TGG | - | chr4.4:16484927-16484946 | None:intergenic | 15.0% |
| !!! | AATTCTCTAAAATTATAAAG+GGG | - | chr4.4:16487509-16487528 | None:intergenic | 15.0% |
| !!! | GAATTCTCTAAAATTATAAA+GGG | - | chr4.4:16487510-16487529 | None:intergenic | 15.0% |
| !!! | TATTTGAAATTTCAAAAGAA+CGG | + | chr4.4:16483535-16483554 | MS.gene09186:intron | 15.0% |
| !!! | TGAATTCTCTAAAATTATAA+AGG | - | chr4.4:16487511-16487530 | None:intergenic | 15.0% |
| !! | AAAGATTATAACTCTTGATT+GGG | + | chr4.4:16487770-16487789 | MS.gene09186:intron | 20.0% |
| !! | AATAAAACCAAGCATATAAA+GGG | - | chr4.4:16484895-16484914 | None:intergenic | 20.0% |
| !! | AATAAATTTAAACTTCGATC+TGG | + | chr4.4:16486393-16486412 | MS.gene09186:intron | 20.0% |
| !! | AATCAAGAGTTATAATCTTT+GGG | - | chr4.4:16487770-16487789 | None:intergenic | 20.0% |
| !! | ATAGTATATATATGAGTATC+AGG | + | chr4.4:16487668-16487687 | MS.gene09186:intron | 20.0% |
| !! | ATCTTATTATTAGTGTGTTT+GGG | + | chr4.4:16487611-16487630 | MS.gene09186:intron | 20.0% |
| !! | GTAAAAATGAAGATTAAGAT+AGG | - | chr4.4:16483193-16483212 | None:intergenic | 20.0% |
| !! | TAATAACAATGAAATAGACT+AGG | - | chr4.4:16483743-16483762 | None:intergenic | 20.0% |
| !! | TACAAAATGTATGATTCAAA+AGG | - | chr4.4:16484126-16484145 | None:intergenic | 20.0% |
| !! | TATATGACATTCTTAATGAT+TGG | - | chr4.4:16483645-16483664 | None:intergenic | 20.0% |
| !! | TATCTTATTATTAGTGTGTT+TGG | + | chr4.4:16487610-16487629 | MS.gene09186:intron | 20.0% |
| !! | TCTATATATACACAAGAATA+AGG | + | chr4.4:16485308-16485327 | MS.gene09186:intron | 20.0% |
| !!! | ATCTATTTCTTGATTTCAAT+AGG | + | chr4.4:16487584-16487603 | MS.gene09186:intron | 20.0% |
| !!! | CTTTTGATAATGATCATAAA+TGG | - | chr4.4:16483987-16484006 | None:intergenic | 20.0% |
| !!! | TCTTAATGATTGGTTATTTA+TGG | - | chr4.4:16483635-16483654 | None:intergenic | 20.0% |
| !!! | TGAATTTGAAATATTTGACA+AGG | + | chr4.4:16483344-16483363 | MS.gene09186:intron | 20.0% |
| ! | AAATTTAAGAATTTACCTGC+TGG | + | chr4.4:16484322-16484341 | MS.gene09186:CDS | 25.0% |
| ! | ATGAAGATTAAGATAGGTAA+TGG | - | chr4.4:16483187-16483206 | None:intergenic | 25.0% |
| ! | CAAAAGGAATATACATTTGT+GGG | + | chr4.4:16486460-16486479 | MS.gene09186:intron | 25.0% |
| ! | CAAAGATTATAACTCTTGAT+TGG | + | chr4.4:16487769-16487788 | MS.gene09186:intron | 25.0% |
| ! | CAATAAAACCAAGCATATAA+AGG | - | chr4.4:16484896-16484915 | None:intergenic | 25.0% |
| ! | CAATCAAGAGTTATAATCTT+TGG | - | chr4.4:16487771-16487790 | None:intergenic | 25.0% |
| ! | GACATTTGGATTCTAATAAA+AGG | + | chr4.4:16486192-16486211 | MS.gene09186:intron | 25.0% |
| ! | TAAGATAGTTGGTTACTATT+GGG | + | chr4.4:16483461-16483480 | MS.gene09186:intron | 25.0% |
| ! | TATTATGTTACTCATTCAGT+TGG | + | chr4.4:16484195-16484214 | MS.gene09186:intron | 25.0% |
| ! | TCTGCATCATTTACAAAATA+AGG | + | chr4.4:16485435-16485454 | MS.gene09186:intron | 25.0% |
| ! | TCTTATTATTAGTGTGTTTG+GGG | + | chr4.4:16487612-16487631 | MS.gene09186:intron | 25.0% |
| ! | TGTATATATAGAAAACCCAT+AGG | - | chr4.4:16485300-16485319 | None:intergenic | 25.0% |
| ! | TTAAGATAGTTGGTTACTAT+TGG | + | chr4.4:16483460-16483479 | MS.gene09186:intron | 25.0% |
| ! | TTACTTGTAACAGATACAAA+CGG | - | chr4.4:16486013-16486032 | None:intergenic | 25.0% |
| ! | TTATTTATGGTATGTTTGGA+TGG | - | chr4.4:16483622-16483641 | None:intergenic | 25.0% |
| ! | TTCATTGAGTTAAATTCGTT+TGG | - | chr4.4:16485410-16485429 | None:intergenic | 25.0% |
| ! | TTCTCAACATTGAAAAGATT+AGG | + | chr4.4:16485259-16485278 | MS.gene09186:intron | 25.0% |
| ! | TTGGTTATTTATGGTATGTT+TGG | - | chr4.4:16483626-16483645 | None:intergenic | 25.0% |
| ! | TTTCATTAGAATCCAAATGT+CGG | - | chr4.4:16486372-16486391 | None:intergenic | 25.0% |
| !! | ACGTTTTATCAAAGAAAACT+TGG | - | chr4.4:16485656-16485675 | None:intergenic | 25.0% |
| !! | ATAATTTGTCATAAAATGCG+TGG | + | chr4.4:16487373-16487392 | MS.gene09186:intron | 25.0% |
| !! | TTAAGTTGTAACACATCTTA+AGG | + | chr4.4:16486681-16486700 | MS.gene09186:intron | 25.0% |
| !!! | ATATTTTTAGCTAGTAGAGA+AGG | + | chr4.4:16488010-16488029 | MS.gene09186:intron | 25.0% |
| !!! | TATTTTTAGCTAGTAGAGAA+GGG | + | chr4.4:16488011-16488030 | MS.gene09186:intron | 25.0% |
| !!! | TGACCTATGAATATTTTTGT+AGG | + | chr4.4:16485068-16485087 | MS.gene09186:intron | 25.0% |
| !!! | TTGGTAACACTTTTTTAACA+AGG | - | chr4.4:16487323-16487342 | None:intergenic | 25.0% |
| AAGATAGTTGGTTACTATTG+GGG | + | chr4.4:16483462-16483481 | MS.gene09186:intron | 30.0% | |
| AATAGAATATTGTTTCCCCA+GGG | + | chr4.4:16484503-16484522 | MS.gene09186:intron | 30.0% | |
| AATGAACAGAACTGATAGAA+GGG | - | chr4.4:16487879-16487898 | None:intergenic | 30.0% | |
| AATTCCTACTTGTTTATTGC+AGG | + | chr4.4:16487231-16487250 | MS.gene09186:CDS | 30.0% | |
| AATTGATATGTTGTTAGTCC+AGG | - | chr4.4:16484176-16484195 | None:intergenic | 30.0% | |
| ACAAGTTAATGTTGAGAAGA+AGG | - | chr4.4:16487285-16487304 | None:intergenic | 30.0% | |
| ACCAAATTAGCAGTTAAAGA+TGG | - | chr4.4:16484443-16484462 | None:intergenic | 30.0% | |
| ACCATCTTTAACTGCTAATT+TGG | + | chr4.4:16484439-16484458 | MS.gene09186:intron | 30.0% | |
| AGGATATATTTGACTCTGTT+AGG | + | chr4.4:16483809-16483828 | MS.gene09186:intron | 30.0% | |
| AGTACTTGAAACCATCAAAA+AGG | + | chr4.4:16483275-16483294 | MS.gene09186:CDS | 30.0% | |
| ATCAAAGAAAACTTGGAAAG+TGG | - | chr4.4:16485649-16485668 | None:intergenic | 30.0% | |
| ATGTTCGTTCAAATAAGACT+TGG | - | chr4.4:16483845-16483864 | None:intergenic | 30.0% | |
| ATTTGGGAAATTCTAAGTGT+TGG | + | chr4.4:16486837-16486856 | MS.gene09186:intron | 30.0% | |
| CATTAGGTACATGTAAAGTT+TGG | + | chr4.4:16483408-16483427 | MS.gene09186:intron | 30.0% | |
| CATTATGTTACGTTTGAATC+AGG | + | chr4.4:16487938-16487957 | MS.gene09186:intron | 30.0% | |
| CCAAAAGGAATATACATTTG+TGG | + | chr4.4:16486459-16486478 | MS.gene09186:intron | 30.0% | |
| CGTAAACAAAAATCGACATT+TGG | + | chr4.4:16486178-16486197 | MS.gene09186:intron | 30.0% | |
| GACAACATAATAAAGCTGTT+TGG | - | chr4.4:16487342-16487361 | None:intergenic | 30.0% | |
| GACTTGTGATTATGTCTAAA+TGG | + | chr4.4:16485913-16485932 | MS.gene09186:intron | 30.0% | |
| GCAATAAACAAGTAGGAATT+TGG | - | chr4.4:16487231-16487250 | None:intergenic | 30.0% | |
| GCACATAATCACTATTCATT+AGG | + | chr4.4:16483392-16483411 | MS.gene09186:intron | 30.0% | |
| GGACCTACAAAAATATTCAT+AGG | - | chr4.4:16485074-16485093 | None:intergenic | 30.0% | |
| GGATATATTTGACTCTGTTA+GGG | + | chr4.4:16483810-16483829 | MS.gene09186:intron | 30.0% | |
| GGATATCATTAAACACCAAA+AGG | + | chr4.4:16486572-16486591 | MS.gene09186:intron | 30.0% | |
| GTATACAATATTCCAGAACA+TGG | + | chr4.4:16485552-16485571 | MS.gene09186:intron | 30.0% | |
| GTGGACATGCTAAAATATAT+TGG | + | chr4.4:16484256-16484275 | MS.gene09186:CDS | 30.0% | |
| TAATAGAATATTGTTTCCCC+AGG | + | chr4.4:16484502-16484521 | MS.gene09186:intron | 30.0% | |
| TAGTAAATCCCAAACATCAT+CGG | - | chr4.4:16485370-16485389 | None:intergenic | 30.0% | |
| TAGTGATTCAGATATGTCAT+CGG | + | chr4.4:16484596-16484615 | MS.gene09186:CDS | 30.0% | |
| TGGAATATTGTATACATGCT+GGG | - | chr4.4:16485547-16485566 | None:intergenic | 30.0% | |
| TTAATTTCATGTTCTGCCTT+AGG | - | chr4.4:16485880-16485899 | None:intergenic | 30.0% | |
| TTCACTGTATCTCATACATT+TGG | + | chr4.4:16486515-16486534 | MS.gene09186:intron | 30.0% | |
| TTCTTTATCTTCTGTATCTG+TGG | - | chr4.4:16486736-16486755 | None:intergenic | 30.0% | |
| ! | ACATCATTTTACTAATTCCG+TGG | + | chr4.4:16486085-16486104 | MS.gene09186:intron | 30.0% |
| ! | ACGAACATGTTTACTTGTTA+TGG | + | chr4.4:16483857-16483876 | MS.gene09186:intron | 30.0% |
| ! | ATATTTTCATCCCAGATGAA+TGG | + | chr4.4:16482928-16482947 | MS.gene09186:CDS | 30.0% |
| ! | ATGCTTAGTGTTGAAATTTG+GGG | - | chr4.4:16487067-16487086 | None:intergenic | 30.0% |
| ! | CATAGTCTATACCTTTTTGA+TGG | - | chr4.4:16483289-16483308 | None:intergenic | 30.0% |
| ! | CCACAAATGTATATTCCTTT+TGG | - | chr4.4:16486462-16486481 | None:intergenic | 30.0% |
| ! | GATCTTCTAGTTATGCATTT+GGG | + | chr4.4:16486821-16486840 | MS.gene09186:intron | 30.0% |
| ! | GATGCTTAGTGTTGAAATTT+GGG | - | chr4.4:16487068-16487087 | None:intergenic | 30.0% |
| ! | GTGTTATTCAATTGCTAGTT+AGG | + | chr4.4:16483437-16483456 | MS.gene09186:intron | 30.0% |
| ! | GTTTTCTATATACAGTGAAG+TGG | + | chr4.4:16483764-16483783 | MS.gene09186:intron | 30.0% |
| ! | TCTGTCATTTATTCCATAAC+AGG | + | chr4.4:16483897-16483916 | MS.gene09186:intron | 30.0% |
| ! | TGATCTTCTAGTTATGCATT+TGG | + | chr4.4:16486820-16486839 | MS.gene09186:intron | 30.0% |
| ! | TGATGCTTAGTGTTGAAATT+TGG | - | chr4.4:16487069-16487088 | None:intergenic | 30.0% |
| ! | TGTTGGTTATGAAGTATTAG+TGG | + | chr4.4:16484237-16484256 | MS.gene09186:CDS | 30.0% |
| !!! | AATGTCGATTTTTGTTTACG+AGG | - | chr4.4:16486178-16486197 | None:intergenic | 30.0% |
| !!! | AGCATTTTTTCGCTTATCAA+AGG | - | chr4.4:16484020-16484039 | None:intergenic | 30.0% |
| AAATACCTTCATCAGCTTGA+GGG | - | chr4.4:16485518-16485537 | None:intergenic | 35.0% | |
| AATTTCATGTCATCTGCCAT+GGG | + | chr4.4:16487463-16487482 | MS.gene09186:intron | 35.0% | |
| ACTGTATCTCATACGTTTGT+TGG | + | chr4.4:16486491-16486510 | MS.gene09186:intron | 35.0% | |
| AGATAGTTGGTTACTATTGG+GGG | + | chr4.4:16483463-16483482 | MS.gene09186:intron | 35.0% | |
| AGGAATATACATTTGTGGGT+TGG | + | chr4.4:16486464-16486483 | MS.gene09186:intron | 35.0% | |
| AGTCGAACTGTCAAAACATT+AGG | + | chr4.4:16483502-16483521 | MS.gene09186:intron | 35.0% | |
| ATAAAAGGATTCCTTACGCA+TGG | + | chr4.4:16486207-16486226 | MS.gene09186:intron | 35.0% | |
| ATAGGAGATTAAGGAGATAG+CGG | - | chr4.4:16483043-16483062 | None:intergenic | 35.0% | |
| ATCCAAAACAGAACACCTAT+GGG | + | chr4.4:16485282-16485301 | MS.gene09186:intron | 35.0% | |
| ATCTTGATTTCTTGTGACAC+AGG | + | chr4.4:16487103-16487122 | MS.gene09186:intron | 35.0% | |
| ATGTGATCTTCCAATCTTCA+CGG | + | chr4.4:16485776-16485795 | MS.gene09186:intron | 35.0% | |
| ATTAGAATCCAAATGTCGGA+GGG | - | chr4.4:16486368-16486387 | None:intergenic | 35.0% | |
| ATTCTATTGTGGTCTCTGTA+TGG | - | chr4.4:16487811-16487830 | None:intergenic | 35.0% | |
| ATTGGAAGATCACATAGGAT+GGG | - | chr4.4:16485771-16485790 | None:intergenic | 35.0% | |
| ATTTACCTGCTGGAAAATTC+TGG | + | chr4.4:16484332-16484351 | MS.gene09186:CDS | 35.0% | |
| CAAAGAAAAGAGACCTGTTA+TGG | - | chr4.4:16483913-16483932 | None:intergenic | 35.0% | |
| CACGAAAACCACAAAATAGA+GGG | - | chr4.4:16486137-16486156 | None:intergenic | 35.0% | |
| CATATCTTGCTCTCAAATAG+AGG | + | chr4.4:16485231-16485250 | MS.gene09186:intron | 35.0% | |
| CCTATCTTAACAACATGTGT+GGG | - | chr4.4:16484283-16484302 | None:intergenic | 35.0% | |
| CCTCTTATAGTGAATACTTC+TGG | + | chr4.4:16484055-16484074 | MS.gene09186:CDS | 35.0% | |
| CGAATCTTTATGCTTGCAAT+GGG | - | chr4.4:16484669-16484688 | None:intergenic | 35.0% | |
| CGAGATAGATTCAGTTCTTA+AGG | + | chr4.4:16484390-16484409 | MS.gene09186:CDS | 35.0% | |
| CGTAGAATATTTCAGAGCTT+GGG | - | chr4.4:16485095-16485114 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4.4:16487043-16487062 | None:intergenic | 35.0% | |
| CTGGAATATTGTATACATGC+TGG | - | chr4.4:16485548-16485567 | None:intergenic | 35.0% | |
| CTGGATATCATTCAAACTCT+CGG | + | chr4.4:16486412-16486431 | MS.gene09186:intron | 35.0% | |
| CTTACAGCATCTTCAAAAAC+AGG | - | chr4.4:16483710-16483729 | None:intergenic | 35.0% | |
| CTTACCTGCAATAAACAAGT+AGG | - | chr4.4:16487238-16487257 | None:intergenic | 35.0% | |
| CTTGAGAAGAGTTCATAAAG+AGG | + | chr4.4:16486996-16487015 | MS.gene09186:intron | 35.0% | |
| GAATGAACAGAACTGATAGA+AGG | - | chr4.4:16487880-16487899 | None:intergenic | 35.0% | |
| GACTAAATCCGATGATGTTT+GGG | + | chr4.4:16485359-16485378 | MS.gene09186:intron | 35.0% | |
| GATGACATATCTGAATCACT+AGG | - | chr4.4:16484597-16484616 | None:intergenic | 35.0% | |
| GCTAGTTAGGTTAAGATAGT+TGG | + | chr4.4:16483450-16483469 | MS.gene09186:intron | 35.0% | |
| GGATGAAAATATCTGGTGAA+GGG | - | chr4.4:16482920-16482939 | None:intergenic | 35.0% | |
| GGTATTTATTGTCTGTTTGC+AGG | + | chr4.4:16483789-16483808 | MS.gene09186:intron | 35.0% | |
| GTCGAACTGTCAAAACATTA+GGG | + | chr4.4:16483503-16483522 | MS.gene09186:intron | 35.0% | |
| GTTAGAGAGATTAAACCAAG+AGG | - | chr4.4:16483128-16483147 | None:intergenic | 35.0% | |
| GTTCAAATAAGACTTGGATC+AGG | - | chr4.4:16483839-16483858 | None:intergenic | 35.0% | |
| TAAAGATCATCCGTGAAGAT+TGG | - | chr4.4:16485789-16485808 | None:intergenic | 35.0% | |
| TAAATACCTTCATCAGCTTG+AGG | - | chr4.4:16485519-16485538 | None:intergenic | 35.0% | |
| TAATTTCATGTCATCTGCCA+TGG | + | chr4.4:16487462-16487481 | MS.gene09186:intron | 35.0% | |
| TAGATTCAGTTCTTAAGGAC+CGG | + | chr4.4:16484395-16484414 | MS.gene09186:CDS | 35.0% | |
| TATATATGAGTATCAGGTCG+AGG | + | chr4.4:16487674-16487693 | MS.gene09186:intron | 35.0% | |
| TATTGTATACATGCTGGGAA+TGG | - | chr4.4:16485542-16485561 | None:intergenic | 35.0% | |
| TCGAATCTTTATGCTTGCAA+TGG | - | chr4.4:16484670-16484689 | None:intergenic | 35.0% | |
| TCTATATACAGTGAAGTGGA+TGG | + | chr4.4:16483768-16483787 | MS.gene09186:intron | 35.0% | |
| TCTGTTCATTCTTCTTGATG+TGG | + | chr4.4:16487889-16487908 | MS.gene09186:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr4.4:16486272-16486291 | None:intergenic | 35.0% | |
| TGAAGATTGGAAGATCACAT+AGG | - | chr4.4:16485776-16485795 | None:intergenic | 35.0% | |
| TGACTAAATCCGATGATGTT+TGG | + | chr4.4:16485358-16485377 | MS.gene09186:intron | 35.0% | |
| TGCATAACTAGAAGATCAGA+TGG | - | chr4.4:16486818-16486837 | None:intergenic | 35.0% | |
| TGGGATTTACTAACTGACTA+AGG | + | chr4.4:16485378-16485397 | MS.gene09186:intron | 35.0% | |
| TGGTTGCTAATAGGAGATTA+AGG | - | chr4.4:16483052-16483071 | None:intergenic | 35.0% | |
| TTACGTTTGAATCAGGAGAA+AGG | + | chr4.4:16487945-16487964 | MS.gene09186:intron | 35.0% | |
| TTATAGTGAATACTTCTGGC+TGG | + | chr4.4:16484059-16484078 | MS.gene09186:CDS | 35.0% | |
| TTATCACGACAAAGTCTCAT+TGG | + | chr4.4:16485745-16485764 | MS.gene09186:intron | 35.0% | |
| TTGCTGATGTACTTACCAAA+GGG | - | chr4.4:16485588-16485607 | None:intergenic | 35.0% | |
| ! | AACACTGATGGATCTATCTT+AGG | - | chr4.4:16483947-16483966 | None:intergenic | 35.0% |
| ! | ACATACTCTAAGAACACTGA+TGG | - | chr4.4:16483959-16483978 | None:intergenic | 35.0% |
| ! | AGTTGATGCTTGTAACTTGA+TGG | + | chr4.4:16484767-16484786 | MS.gene09186:intron | 35.0% |
| ! | ATAAGCTACTTTCTTGCATC+TGG | - | chr4.4:16483072-16483091 | None:intergenic | 35.0% |
| ! | CAAGATATGACGACACATTT+TGG | - | chr4.4:16485220-16485239 | None:intergenic | 35.0% |
| ! | CATAACAGGTCTCTTTTCTT+TGG | + | chr4.4:16483911-16483930 | MS.gene09186:intron | 35.0% |
| ! | CTCTACTTGTTAAGTTGTGA+TGG | + | chr4.4:16483370-16483389 | MS.gene09186:intron | 35.0% |
| ! | CTGGAAAATTCTGGTTAGAT+GGG | + | chr4.4:16484341-16484360 | MS.gene09186:CDS | 35.0% |
| ! | GTGGTGTCAAACATTAGAAA+AGG | + | chr4.4:16487392-16487411 | MS.gene09186:intron | 35.0% |
| ! | TATAGTGAATACTTCTGGCT+GGG | + | chr4.4:16484060-16484079 | MS.gene09186:CDS | 35.0% |
| ! | TCATCTGGGATGAAAATATC+TGG | - | chr4.4:16482927-16482946 | None:intergenic | 35.0% |
| ! | TGGAAAATTCTGGTTAGATG+GGG | + | chr4.4:16484342-16484361 | MS.gene09186:CDS | 35.0% |
| !! | ATACGTTTGTTGGCTTTAAC+GGG | + | chr4.4:16486629-16486648 | MS.gene09186:intron | 35.0% |
| !! | CATACGTTTGTTGGCTTTAA+CGG | + | chr4.4:16486628-16486647 | MS.gene09186:intron | 35.0% |
| !! | CCAAGCTCTGAAATATTCTA+CGG | + | chr4.4:16485093-16485112 | MS.gene09186:CDS | 35.0% |
| !! | CCAGAAGTATTCACTATAAG+AGG | - | chr4.4:16484058-16484077 | None:intergenic | 35.0% |
| !! | CTCTAAAATTATAAAGGGGC+AGG | - | chr4.4:16487505-16487524 | None:intergenic | 35.0% |
| !! | GATTTTTGTTTACGAGGCAT+TGG | - | chr4.4:16486172-16486191 | None:intergenic | 35.0% |
| !!! | TGACGACACATTTTGGAATT+TGG | - | chr4.4:16485213-16485232 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr4.4:16486271-16486290 | MS.gene09186:intron | 35.0% |
| !!! | TTGGTTTTGTCTTGCATTTC+AGG | + | chr4.4:16484214-16484233 | MS.gene09186:intron | 35.0% |
| AAAAGTCAACCTCTTGCTAC+AGG | + | chr4.4:16487198-16487217 | MS.gene09186:CDS | 40.0% | |
| AAAGTCAACCTCTTGCTACA+GGG | + | chr4.4:16487199-16487218 | MS.gene09186:CDS | 40.0% | |
| AAATTAAGTGAACGGCGTAG+TGG | - | chr4.4:16487845-16487864 | None:intergenic | 40.0% | |
| AATACCTTCATCAGCTTGAG+GGG | - | chr4.4:16485517-16485536 | None:intergenic | 40.0% | |
| AATCTTTGGGCTTAGAGAAG+AGG | - | chr4.4:16487757-16487776 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4.4:16486278-16486297 | None:intergenic | 40.0% | |
| ACTACGCCGTTCACTTAATT+TGG | + | chr4.4:16487844-16487863 | MS.gene09186:intron | 40.0% | |
| ACTCCCTATGTAAACACACA+GGG | - | chr4.4:16485616-16485635 | None:intergenic | 40.0% | |
| AGAAAACTTGGAAAGTGGAC+TGG | - | chr4.4:16485644-16485663 | None:intergenic | 40.0% | |
| AGCCAACAATACTAGCATTC+AGG | - | chr4.4:16485119-16485138 | None:intergenic | 40.0% | |
| ATAAGGACAGTGAGATGTCA+AGG | - | chr4.4:16484640-16484659 | None:intergenic | 40.0% | |
| CAAACTGAGTTTACTCCTCT+TGG | + | chr4.4:16483110-16483129 | MS.gene09186:CDS | 40.0% | |
| CAAGAGGAGTAAACTCAGTT+TGG | - | chr4.4:16483112-16483131 | None:intergenic | 40.0% | |
| CACATAAACTACTGCTTTCC+TGG | + | chr4.4:16484155-16484174 | MS.gene09186:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr4.4:16486277-16486296 | None:intergenic | 40.0% | |
| CATTAGAATCCAAATGTCGG+AGG | - | chr4.4:16486369-16486388 | None:intergenic | 40.0% | |
| CCCACACATGTTGTTAAGAT+AGG | + | chr4.4:16484280-16484299 | MS.gene09186:CDS | 40.0% | |
| CCGTAGAATATTTCAGAGCT+TGG | - | chr4.4:16485096-16485115 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4.4:16486246-16486265 | None:intergenic | 40.0% | |
| CTAACCAAAGGTCGCAATTT+AGG | - | chr4.4:16486897-16486916 | None:intergenic | 40.0% | |
| CTACGCCGTTCACTTAATTT+GGG | + | chr4.4:16487845-16487864 | MS.gene09186:intron | 40.0% | |
| CTTGCAATGGGAACTTGATA+AGG | - | chr4.4:16484657-16484676 | None:intergenic | 40.0% | |
| CTTGCTGATGTACTTACCAA+AGG | - | chr4.4:16485589-16485608 | None:intergenic | 40.0% | |
| GAAAGGTCTGACTATGTTAG+AGG | + | chr4.4:16487962-16487981 | MS.gene09186:intron | 40.0% | |
| GAAGATGCTGTAAGACTCTA+AGG | + | chr4.4:16483716-16483735 | MS.gene09186:intron | 40.0% | |
| GAGAAGAGTTCATAAAGAGG+AGG | + | chr4.4:16486999-16487018 | MS.gene09186:intron | 40.0% | |
| GAGGAAACAAAGACATCTCA+AGG | - | chr4.4:16487738-16487757 | None:intergenic | 40.0% | |
| GAGTGCCCAAATTAAGTGAA+CGG | - | chr4.4:16487853-16487872 | None:intergenic | 40.0% | |
| GAGTGTTATCTATCCGATGT+GGG | - | chr4.4:16486977-16486996 | None:intergenic | 40.0% | |
| GATAGTTGGTTACTATTGGG+GGG | + | chr4.4:16483464-16483483 | MS.gene09186:intron | 40.0% | |
| GATCCAAAACAGAACACCTA+TGG | + | chr4.4:16485281-16485300 | MS.gene09186:intron | 40.0% | |
| GATTGGAAGATCACATAGGA+TGG | - | chr4.4:16485772-16485791 | None:intergenic | 40.0% | |
| GCACGAAAACCACAAAATAG+AGG | - | chr4.4:16486138-16486157 | None:intergenic | 40.0% | |
| GCCTATCTTAACAACATGTG+TGG | - | chr4.4:16484284-16484303 | None:intergenic | 40.0% | |
| GGCACACAAAAAACACCAAA+AGG | + | chr4.4:16486444-16486463 | MS.gene09186:intron | 40.0% | |
| GGGATGAAAATATCTGGTGA+AGG | - | chr4.4:16482921-16482940 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr4.4:16486322-16486341 | None:intergenic | 40.0% | |
| GTTGTTTACGAAGTTACTCC+AGG | + | chr4.4:16483149-16483168 | MS.gene09186:CDS | 40.0% | |
| TAATGGCTAGAAAACCTACC+TGG | - | chr4.4:16483170-16483189 | None:intergenic | 40.0% | |
| TACTCCCTATGTAAACACAC+AGG | - | chr4.4:16485617-16485636 | None:intergenic | 40.0% | |
| TAGGAGATTAAGGAGATAGC+GGG | - | chr4.4:16483042-16483061 | None:intergenic | 40.0% | |
| TCAAACTCTCGGTATCATTG+AGG | + | chr4.4:16486423-16486442 | MS.gene09186:intron | 40.0% | |
| TCTTGCATCTGGTTGCTAAT+AGG | - | chr4.4:16483061-16483080 | None:intergenic | 40.0% | |
| TGACCCTGTGTGTTTACATA+GGG | + | chr4.4:16485610-16485629 | MS.gene09186:intron | 40.0% | |
| TGAGCTACCCTTTATATGCT+TGG | + | chr4.4:16484885-16484904 | MS.gene09186:intron | 40.0% | |
| TGGAAATTCCGCCTTAATTG+CGG | + | chr4.4:16486857-16486876 | MS.gene09186:intron | 40.0% | |
| TGGTCAAGGCTATTCTATTG+TGG | - | chr4.4:16487822-16487841 | None:intergenic | 40.0% | |
| TTAGAATCCAAATGTCGGAG+GGG | - | chr4.4:16486367-16486386 | None:intergenic | 40.0% | |
| TTAGCCAAAGTAGTCCACAT+AGG | + | chr4.4:16485806-16485825 | MS.gene09186:intron | 40.0% | |
| TTCAGATATGTCATCGGACA+AGG | + | chr4.4:16484602-16484621 | MS.gene09186:CDS | 40.0% | |
| TTCGAGTGATAAGGCTGTTT+AGG | - | chr4.4:16484808-16484827 | None:intergenic | 40.0% | |
| TTGACCCTGTGTGTTTACAT+AGG | + | chr4.4:16485609-16485628 | MS.gene09186:intron | 40.0% | |
| TTGCAATGAAGGCTAACCAA+AGG | - | chr4.4:16486909-16486928 | None:intergenic | 40.0% | |
| TTGTGACACAGGAATTGTGA+GGG | + | chr4.4:16487114-16487133 | MS.gene09186:intron | 40.0% | |
| TTTACGAAGTTACTCCAGGT+AGG | + | chr4.4:16483153-16483172 | MS.gene09186:intron | 40.0% | |
| ! | AACCCATAGGTGTTCTGTTT+TGG | - | chr4.4:16485287-16485306 | None:intergenic | 40.0% |
| ! | AATACTTCTGGCTGGGTTAA+AGG | + | chr4.4:16484067-16484086 | MS.gene09186:CDS | 40.0% |
| ! | AATGCCTATGTGGACTACTT+TGG | - | chr4.4:16485813-16485832 | None:intergenic | 40.0% |
| ! | AGAGTGTTATCTATCCGATG+TGG | - | chr4.4:16486978-16486997 | None:intergenic | 40.0% |
| ! | AGATGGTAACGCGTAAGATT+TGG | - | chr4.4:16484426-16484445 | None:intergenic | 40.0% |
| ! | CACACAACTTTCGAGTGATA+AGG | - | chr4.4:16484817-16484836 | None:intergenic | 40.0% |
| ! | GATGGTAACGCGTAAGATTT+GGG | - | chr4.4:16484425-16484444 | None:intergenic | 40.0% |
| ! | GCTGGAAAATTCTGGTTAGA+TGG | + | chr4.4:16484340-16484359 | MS.gene09186:CDS | 40.0% |
| ! | GTTGAAGACCCTCTATTTTG+TGG | + | chr4.4:16486126-16486145 | MS.gene09186:intron | 40.0% |
| ! | TCCTTTTGAACAAACTCCCT+GGG | - | chr4.4:16484522-16484541 | None:intergenic | 40.0% |
| ! | TCTAACCAGAATTTTCCAGC+AGG | - | chr4.4:16484340-16484359 | None:intergenic | 40.0% |
| ! | TGTTTGGGGTTTGTGTTAGA+AGG | + | chr4.4:16487626-16487645 | MS.gene09186:intron | 40.0% |
| ! | TTGTCTTGCATTTCAGGTGT+TGG | + | chr4.4:16484220-16484239 | MS.gene09186:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr4.4:16487041-16487060 | MS.gene09186:intron | 40.0% |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr4.4:16486939-16486958 | MS.gene09186:intron | 40.0% |
| !! | GTGTGATCGGCTTTAAAGAT+TGG | - | chr4.4:16486784-16486803 | None:intergenic | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr4.4:16486940-16486959 | MS.gene09186:intron | 40.0% |
| AAACTCAGTTTGGCCAACGT+CGG | - | chr4.4:16483102-16483121 | None:intergenic | 45.0% | |
| AAGTACCTGGAGATTTACCC+TGG | + | chr4.4:16485154-16485173 | MS.gene09186:CDS | 45.0% | |
| ATACCTTCATCAGCTTGAGG+GGG | - | chr4.4:16485516-16485535 | None:intergenic | 45.0% | |
| CAAGTTACCTACCAAGACCA+AGG | - | chr4.4:16485182-16485201 | None:intergenic | 45.0% | |
| CAGCTTGTGACCATTCATCT+GGG | - | chr4.4:16482941-16482960 | None:intergenic | 45.0% | |
| CCTCAAAGCCAACACAATGA+AGG | - | chr4.4:16486941-16486960 | None:intergenic | 45.0% | |
| CTCCAACACCTTCATTGTGT+TGG | + | chr4.4:16486930-16486949 | MS.gene09186:intron | 45.0% | |
| CTTAAGATGAACGAACGACC+AGG | - | chr4.4:16488080-16488099 | None:intergenic | 45.0% | |
| CTTGTGACACAGGAATTGTG+AGG | + | chr4.4:16487113-16487132 | MS.gene09186:intron | 45.0% | |
| CTTTCCTAAGTTCTCCACAG+CGG | + | chr4.4:16484851-16484870 | MS.gene09186:intron | 45.0% | |
| GATTCGACATGTTCATCGTG+AGG | + | chr4.4:16484683-16484702 | MS.gene09186:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4.4:16486247-16486266 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr4.4:16486250-16486269 | None:intergenic | 45.0% | |
| GCTTATCTTGATACCGACGT+TGG | + | chr4.4:16483086-16483105 | MS.gene09186:CDS | 45.0% | |
| GGACGTTTGATACCTTGCAA+AGG | - | chr4.4:16486715-16486734 | None:intergenic | 45.0% | |
| GGCCTGAATGCTAGTATTGT+TGG | + | chr4.4:16485114-16485133 | MS.gene09186:CDS | 45.0% | |
| GGCTGTATGATCTGTGTGAT+CGG | - | chr4.4:16486797-16486816 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr4.4:16486316-16486335 | None:intergenic | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr4.4:16486315-16486334 | None:intergenic | 45.0% | |
| TGGTTAGATGGGGAAGATGA+TGG | + | chr4.4:16484352-16484371 | MS.gene09186:CDS | 45.0% | |
| TGTGACACAGGAATTGTGAG+GGG | + | chr4.4:16487115-16487134 | MS.gene09186:intron | 45.0% | |
| TTCCAGAACATGGTACTGCT+TGG | + | chr4.4:16485562-16485581 | MS.gene09186:intron | 45.0% | |
| TTTAGCTAGTAGAGAAGGGC+TGG | + | chr4.4:16488015-16488034 | MS.gene09186:intron | 45.0% | |
| TTTGTTCTGTGACGCTGCAT+TGG | + | chr4.4:16485694-16485713 | MS.gene09186:intron | 45.0% | |
| ! | AAGGCATCACTACCTTTGCA+AGG | + | chr4.4:16486700-16486719 | MS.gene09186:intron | 45.0% |
| ! | AGCCAACACAATGAAGGTGT+TGG | - | chr4.4:16486935-16486954 | None:intergenic | 45.0% |
| ! | CACATAGGCATTTTGTGCTG+CGG | + | chr4.4:16485821-16485840 | MS.gene09186:intron | 45.0% |
| ! | CAGGGAGTTTGTTCAAAAGG+AGG | + | chr4.4:16484521-16484540 | MS.gene09186:intron | 45.0% |
| ! | CCTTTTGAACAAACTCCCTG+GGG | - | chr4.4:16484521-16484540 | None:intergenic | 45.0% |
| ! | CTCCTTTTGAACAAACTCCC+TGG | - | chr4.4:16484523-16484542 | None:intergenic | 45.0% |
| ! | GCAGTTGAATCTGAAGTACC+TGG | + | chr4.4:16485141-16485160 | MS.gene09186:CDS | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr4.4:16486282-16486301 | MS.gene09186:intron | 45.0% |
| ! | TTGTGGTTTTCGTGCCTAGA+AGG | + | chr4.4:16486143-16486162 | MS.gene09186:intron | 45.0% |
| !! | AATTGTGAGGGGCATTGACA+CGG | + | chr4.4:16487126-16487145 | MS.gene09186:CDS | 45.0% |
| !! | ACTATTGGGGGGTGTGTTTT+TGG | + | chr4.4:16483475-16483494 | MS.gene09186:intron | 45.0% |
| !! | AGGCGTTGAACTGGATACAA+TGG | - | chr4.4:16482970-16482989 | None:intergenic | 45.0% |
| !! | CAAAACCGGCTTGTAAGGTT+AGG | - | chr4.4:16487029-16487048 | None:intergenic | 45.0% |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr4.4:16486932-16486951 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4.4:16487034-16487053 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4.4:16487031-16487050 | MS.gene09186:intron | 45.0% |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | + | chr4.4:16486938-16486957 | MS.gene09186:intron | 45.0% |
| !! | GTTGATTTGCCAACACTTCC+AGG | - | chr4.4:16483014-16483033 | None:intergenic | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr4.4:16486941-16486960 | MS.gene09186:intron | 45.0% |
| !!! | AATTTTTATCTTTTTATTTT+TGG | - | chr4.4:16486054-16486073 | None:intergenic | 5.0% |
| AAATGTCGGAGGGGTAACCT+TGG | - | chr4.4:16486358-16486377 | None:intergenic | 50.0% | |
| AAGGTTACCCCTCCGACATT+TGG | + | chr4.4:16486357-16486376 | MS.gene09186:intron | 50.0% | |
| AGGATTCCTTACGCATGGTC+TGG | + | chr4.4:16486212-16486231 | MS.gene09186:intron | 50.0% | |
| AGGTCCACAAACGAGTACGA+CGG | - | chr4.4:16482994-16483013 | None:intergenic | 50.0% | |
| AGGTCGCAATTTAGGCGACT+AGG | - | chr4.4:16486889-16486908 | None:intergenic | 50.0% | |
| AGTTCGCAACACTACTGCCA+CGG | - | chr4.4:16486105-16486124 | None:intergenic | 50.0% | |
| ATCTGCCATGGGTCTGTTGT+TGG | + | chr4.4:16487474-16487493 | MS.gene09186:intron | 50.0% | |
| ATGGAAGACTTCAGAGCGAG+GGG | - | chr4.4:16483603-16483622 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr4.4:16486338-16486357 | MS.gene09186:intron | 50.0% | |
| CGACATGTTCATCGTGAGGT+TGG | + | chr4.4:16484687-16484706 | MS.gene09186:intron | 50.0% | |
| CGCAGCACAAAATGCCTATG+TGG | - | chr4.4:16485823-16485842 | None:intergenic | 50.0% | |
| CGCGTAAGATTTGGGCTTAC+CGG | - | chr4.4:16484417-16484436 | None:intergenic | 50.0% | |
| CGCTGTGGAGAACTTAGGAA+AGG | - | chr4.4:16484853-16484872 | None:intergenic | 50.0% | |
| GATGGAAGACTTCAGAGCGA+GGG | - | chr4.4:16483604-16483623 | None:intergenic | 50.0% | |
| GCACTCCTAACCTTACAAGC+CGG | + | chr4.4:16487021-16487040 | MS.gene09186:intron | 50.0% | |
| GCAGCTTGTGACCATTCATC+TGG | - | chr4.4:16482942-16482961 | None:intergenic | 50.0% | |
| GGATATCACCCTGTAGCAAG+AGG | - | chr4.4:16487210-16487229 | None:intergenic | 50.0% | |
| GGATTCCTTACGCATGGTCT+GGG | + | chr4.4:16486213-16486232 | MS.gene09186:intron | 50.0% | |
| GGGGTTTGTGTTAGAAGGAG+TGG | + | chr4.4:16487631-16487650 | MS.gene09186:intron | 50.0% | |
| GGTAGGTGCCCATGAATAGT+CGG | + | chr4.4:16485842-16485861 | MS.gene09186:intron | 50.0% | |
| GGTCGCAATTTAGGCGACTA+GGG | - | chr4.4:16486888-16486907 | None:intergenic | 50.0% | |
| GTCGCAATTTAGGCGACTAG+GGG | - | chr4.4:16486887-16486906 | None:intergenic | 50.0% | |
| GTCGCCTAAATTGCGACCTT+TGG | + | chr4.4:16486890-16486909 | MS.gene09186:intron | 50.0% | |
| TAGTCCCAACAACAGACCCA+TGG | - | chr4.4:16487482-16487501 | None:intergenic | 50.0% | |
| TCTGCCATGGGTCTGTTGTT+GGG | + | chr4.4:16487475-16487494 | MS.gene09186:intron | 50.0% | |
| TTAAGTGAACGGCGTAGTGG+TGG | - | chr4.4:16487842-16487861 | None:intergenic | 50.0% | |
| ! | ATGTGAGAGGCTAGTTGCTC+CGG | + | chr4.4:16488040-16488059 | MS.gene09186:CDS | 50.0% |
| ! | CCCCAGGGAGTTTGTTCAAA+AGG | + | chr4.4:16484518-16484537 | MS.gene09186:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr4.4:16486961-16486980 | MS.gene09186:intron | 50.0% |
| ! | GGTGTTGGAGGTTGCAATGA+AGG | - | chr4.4:16486920-16486939 | None:intergenic | 50.0% |
| ! | GTTTGTGGACCTGGAAGTGT+TGG | + | chr4.4:16483002-16483021 | MS.gene09186:CDS | 50.0% |
| ! | TAGGCATTTTGTGCTGCGGT+AGG | + | chr4.4:16485825-16485844 | MS.gene09186:intron | 50.0% |
| !! | ATTAAGGAGATAGCGGGCGA+AGG | - | chr4.4:16483036-16483055 | None:intergenic | 50.0% |
| !! | CGCGTGTACCGACTATTCAT+GGG | - | chr4.4:16485853-16485872 | None:intergenic | 50.0% |
| !! | TCGCGTGTACCGACTATTCA+TGG | - | chr4.4:16485854-16485873 | None:intergenic | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr4.4:16486303-16486322 | None:intergenic | 55.0% | |
| AGGCACCAGGGTAAATCTCC+AGG | - | chr4.4:16485162-16485181 | None:intergenic | 55.0% | |
| CATGGTACTGCTTGGCCCTT+TGG | + | chr4.4:16485570-16485589 | MS.gene09186:intron | 55.0% | |
| CCAGGACAGCTCTGTTCAAC+CGG | - | chr4.4:16488062-16488081 | None:intergenic | 55.0% | |
| CCTTACGCATGGTCTGGGAA+GGG | + | chr4.4:16486218-16486237 | MS.gene09186:intron | 55.0% | |
| CTAGGGGCAGACCGCAATTA+AGG | - | chr4.4:16486871-16486890 | None:intergenic | 55.0% | |
| CTTACGCATGGTCTGGGAAG+GGG | + | chr4.4:16486219-16486238 | MS.gene09186:intron | 55.0% | |
| GACTCCGCTGTGGAGAACTT+AGG | - | chr4.4:16484858-16484877 | None:intergenic | 55.0% | |
| GGAGATTTACCCTGGTGCCT+TGG | + | chr4.4:16485162-16485181 | MS.gene09186:CDS | 55.0% | |
| GGATGGAAGACTTCAGAGCG+AGG | - | chr4.4:16483605-16483624 | None:intergenic | 55.0% | |
| GGCCAAGCAGTACCATGTTC+TGG | - | chr4.4:16485567-16485586 | None:intergenic | 55.0% | |
| GGTCCACAAACGAGTACGAC+GGG | - | chr4.4:16482993-16483012 | None:intergenic | 55.0% | |
| GTCGTACTCGTTTGTGGACC+TGG | + | chr4.4:16482993-16483012 | MS.gene09186:CDS | 55.0% | |
| TCAGTCACAAGACTCCGCTG+TGG | - | chr4.4:16484868-16484887 | None:intergenic | 55.0% | |
| TCCTTACGCATGGTCTGGGA+AGG | + | chr4.4:16486217-16486236 | MS.gene09186:intron | 55.0% | |
| TTACCCTGGTGCCTTGGTCT+TGG | + | chr4.4:16485168-16485187 | MS.gene09186:CDS | 55.0% | |
| ! | CTACCAAGACCAAGGCACCA+GGG | - | chr4.4:16485174-16485193 | None:intergenic | 55.0% |
| !! | AGAAGGGCTGGCTATGTGAG+AGG | + | chr4.4:16488027-16488046 | MS.gene09186:CDS | 55.0% |
| !! | AGGGGCATTGACACGGTCAA+AGG | + | chr4.4:16487133-16487152 | MS.gene09186:CDS | 55.0% |
| !! | CGAGGCATTGGAAGCCTTCT+AGG | - | chr4.4:16486160-16486179 | None:intergenic | 55.0% |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr4.4:16486944-16486963 | MS.gene09186:intron | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr4.4:16486349-16486368 | None:intergenic | 60.0% | |
| CCACAAACGAGTACGACGGG+AGG | - | chr4.4:16482990-16483009 | None:intergenic | 60.0% | |
| CCCTTCCCAGACCATGCGTA+AGG | - | chr4.4:16486221-16486240 | None:intergenic | 60.0% | |
| CCGGTTGAACAGAGCTGTCC+TGG | + | chr4.4:16488059-16488078 | MS.gene09186:CDS | 60.0% | |
| CCTCCCGTCGTACTCGTTTG+TGG | + | chr4.4:16482987-16483006 | MS.gene09186:CDS | 60.0% | |
| GAACGGCGTAGTGGTGGTCA+AGG | - | chr4.4:16487836-16487855 | None:intergenic | 60.0% | |
| GCTCCCCCTCAAGCTGATGA+AGG | + | chr4.4:16485510-16485529 | MS.gene09186:intron | 60.0% | |
| GGGGCAGACCGCAATTAAGG+CGG | - | chr4.4:16486868-16486887 | None:intergenic | 60.0% | |
| TCGGTACACGCGAGAGCCTA+AGG | + | chr4.4:16485861-16485880 | MS.gene09186:intron | 60.0% | |
| TGGGAAGGGGTCCCACCATT+TGG | + | chr4.4:16486232-16486251 | MS.gene09186:intron | 60.0% | |
| ! | CCTACCAAGACCAAGGCACC+AGG | - | chr4.4:16485175-16485194 | None:intergenic | 60.0% |
| !! | CCTGGTGCCTTGGTCTTGGT+AGG | + | chr4.4:16485172-16485191 | MS.gene09186:intron | 60.0% |
| !! | TACGACGGGAGGCGTTGAAC+TGG | - | chr4.4:16482979-16482998 | None:intergenic | 60.0% |
| AAGGAGGCTCGTCTCCTGCG+TGG | + | chr4.4:16484537-16484556 | MS.gene09186:CDS | 65.0% | |
| CCACTATCCGTTCGCCACGC+AGG | - | chr4.4:16484554-16484573 | None:intergenic | 65.0% | |
| CCTGCGTGGCGAACGGATAG+TGG | + | chr4.4:16484551-16484570 | MS.gene09186:CDS | 65.0% | |
| CTCGTCTCCTGCGTGGCGAA+CGG | + | chr4.4:16484544-16484563 | MS.gene09186:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 16482892 | 16488106 | 16482892 | ID=MS.gene09186 |
| chr4.4 | mRNA | 16482892 | 16488106 | 16482892 | ID=MS.gene09186.t1;Parent=MS.gene09186 |
| chr4.4 | exon | 16482892 | 16483170 | 16482892 | ID=MS.gene09186.t1.exon1;Parent=MS.gene09186.t1 |
| chr4.4 | CDS | 16482892 | 16483170 | 16482892 | ID=cds.MS.gene09186.t1;Parent=MS.gene09186.t1 |
| chr4.4 | exon | 16483263 | 16483296 | 16483263 | ID=MS.gene09186.t1.exon2;Parent=MS.gene09186.t1 |
| chr4.4 | CDS | 16483263 | 16483296 | 16483263 | ID=cds.MS.gene09186.t1;Parent=MS.gene09186.t1 |
| chr4.4 | exon | 16483919 | 16484088 | 16483919 | ID=MS.gene09186.t1.exon3;Parent=MS.gene09186.t1 |
| chr4.4 | CDS | 16483919 | 16484088 | 16483919 | ID=cds.MS.gene09186.t1;Parent=MS.gene09186.t1 |
| chr4.4 | exon | 16484236 | 16484416 | 16484236 | ID=MS.gene09186.t1.exon4;Parent=MS.gene09186.t1 |
| chr4.4 | CDS | 16484236 | 16484416 | 16484236 | ID=cds.MS.gene09186.t1;Parent=MS.gene09186.t1 |
| chr4.4 | exon | 16484524 | 16484704 | 16484524 | ID=MS.gene09186.t1.exon5;Parent=MS.gene09186.t1 |
| chr4.4 | CDS | 16484524 | 16484704 | 16484524 | ID=cds.MS.gene09186.t1;Parent=MS.gene09186.t1 |
| chr4.4 | exon | 16485090 | 16485189 | 16485090 | ID=MS.gene09186.t1.exon6;Parent=MS.gene09186.t1 |
| chr4.4 | CDS | 16485090 | 16485189 | 16485090 | ID=cds.MS.gene09186.t1;Parent=MS.gene09186.t1 |
| chr4.4 | exon | 16487125 | 16487252 | 16487125 | ID=MS.gene09186.t1.exon7;Parent=MS.gene09186.t1 |
| chr4.4 | CDS | 16487125 | 16487252 | 16487125 | ID=cds.MS.gene09186.t1;Parent=MS.gene09186.t1 |
| chr4.4 | exon | 16488020 | 16488106 | 16488020 | ID=MS.gene09186.t1.exon8;Parent=MS.gene09186.t1 |
| chr4.4 | CDS | 16488020 | 16488106 | 16488020 | ID=cds.MS.gene09186.t1;Parent=MS.gene09186.t1 |
| Gene Sequence |
| Protein sequence |
