AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09396

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09396.t1 MTR_4g056430 94.473 977 48 2 1 977 1 971 0.0 1863
MS.gene09396.t1 MTR_4g056470 77.854 1016 178 9 1 977 1 1008 0.0 1578
MS.gene09396.t1 MTR_6g477980 56.144 944 370 14 68 977 182 1115 0.0 1041
MS.gene09396.t1 MTR_6g477980 56.144 944 370 14 68 977 176 1109 0.0 1039
MS.gene09396.t1 MTR_1g041345 54.615 910 388 10 84 977 79 979 0.0 1003
MS.gene09396.t1 MTR_1g102630 54.198 917 389 10 80 977 74 978 0.0 1002
MS.gene09396.t1 MTR_2g059590 52.894 881 396 7 106 977 33 903 0.0 965
MS.gene09396.t1 MTR_4g113200 51.759 881 405 10 106 977 7 876 0.0 933
MS.gene09396.t1 MTR_2g059790 57.046 589 241 4 396 977 11 594 0.0 704
MS.gene09396.t1 MTR_2g059590 47.392 671 338 5 106 770 33 694 0.0 666
MS.gene09396.t1 MTR_5g042590 38.933 881 478 21 131 977 162 1016 0.0 589
MS.gene09396.t1 MTR_3g078647 36.384 907 504 27 112 976 47 922 3.72e-162 500
MS.gene09396.t1 MTR_5g087870 35.897 897 496 27 127 976 83 947 3.07e-155 483
MS.gene09396.t1 MTR_3g010650 34.915 885 511 23 127 977 23 876 1.88e-152 473
MS.gene09396.t1 MTR_5g087890 35.535 878 509 25 127 976 43 891 2.76e-152 473
MS.gene09396.t1 MTR_6g043180 33.964 898 508 24 127 976 42 902 9.39e-149 464
MS.gene09396.t1 MTR_5g087870 34.375 896 489 26 127 976 83 925 3.95e-144 453
MS.gene09396.t1 MTR_3g083300 34.569 917 519 31 110 977 25 909 2.51e-141 445
MS.gene09396.t1 MTR_4g083610 33.571 840 481 25 135 938 127 925 4.86e-134 428
MS.gene09396.t1 MTR_2g028910 32.100 838 487 23 139 938 188 981 7.22e-125 405
MS.gene09396.t1 MTR_3g101730 51.389 216 49 4 664 879 15 174 2.97e-57 195
MS.gene09396.t1 MTR_6g037320 52.459 122 47 1 661 782 1 111 9.14e-36 132
MS.gene09396.t1 MTR_8g105540 51.553 161 49 6 12 150 12 165 2.39e-25 104
MS.gene09396.t1 MTR_1g038380 28.455 369 185 14 483 840 123 423 4.35e-22 100
MS.gene09396.t1 MTR_7g067050 40.625 96 43 4 545 635 3 89 2.24e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09396.t1 AT2G27880 57.563 952 354 13 42 977 80 997 0.0 1092
MS.gene09396.t1 AT1G48410 55.970 938 372 14 69 977 123 1048 0.0 1032
MS.gene09396.t1 AT1G48410 55.851 940 372 15 69 977 123 1050 0.0 1027
MS.gene09396.t1 AT1G48410 55.851 940 372 15 69 977 123 1050 0.0 1027
MS.gene09396.t1 AT5G43810 55.899 873 364 8 119 977 123 988 0.0 1002
MS.gene09396.t1 AT5G43810 55.899 873 364 8 119 977 123 988 0.0 1002
MS.gene09396.t1 AT5G43810 55.899 873 364 8 119 977 123 988 0.0 1002
MS.gene09396.t1 AT5G43810 55.899 873 364 8 119 977 123 988 0.0 1002
MS.gene09396.t1 AT1G69440 37.969 906 481 25 106 977 132 990 0.0 567
MS.gene09396.t1 AT2G27040 36.414 898 492 27 127 977 59 924 4.73e-166 510
MS.gene09396.t1 AT2G27040 36.414 898 492 27 127 977 59 924 4.73e-166 510
MS.gene09396.t1 AT5G21150 35.090 892 504 27 127 977 39 896 7.17e-154 478
MS.gene09396.t1 AT2G32940 34.611 887 507 22 127 977 29 878 6.83e-143 448
MS.gene09396.t1 AT1G31280 31.710 924 549 23 50 938 87 963 6.93e-138 439
MS.gene09396.t1 AT5G21030 33.408 898 504 26 116 977 15 854 2.19e-135 428
MS.gene09396.t1 AT5G21030 33.408 898 500 27 116 977 15 850 6.15e-134 424
MS.gene09396.t1 AT1G31290 31.845 851 521 18 114 938 252 1069 1.57e-121 398
MS.gene09396.t1 AT1G31290 31.845 851 521 18 114 938 290 1107 2.93e-121 398
MS.gene09396.t1 AT1G31290 31.845 851 521 18 114 938 326 1143 5.49e-121 398

Find 240 sgRNAs with CRISPR-Local

Find 435 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTCTTCGTTTAATCTTT+TGG 0.179713 4.1:-41477124 None:intergenic
AAAGCGTGAACGCGAGTTTA+AGG 0.220933 4.1:+41475786 MS.gene09396:CDS
GAAGTTGACAATTCTGATTC+TGG 0.225514 4.1:+41480222 MS.gene09396:CDS
ACAGTTGCAGTCTATCTTTC+GGG 0.230214 4.1:-41478138 None:intergenic
TCAATTTGATTTGAATTTGC+TGG 0.242490 4.1:-41478061 None:intergenic
GATAAACCAACGATCATATT+TGG 0.252701 4.1:+41478551 MS.gene09396:CDS
CTCAGCTTTGCTGCTTGATT+TGG 0.257454 4.1:-41478333 None:intergenic
AACAGTTGCAGTCTATCTTT+CGG 0.278068 4.1:-41478139 None:intergenic
AGAAAGCCTTGAGAGGTCTT+AGG 0.284978 4.1:+41476546 MS.gene09396:CDS
GAGAGAAAGTGATATTAAAA+AGG 0.292245 4.1:+41477188 MS.gene09396:CDS
CGACCTGGTTTCGGTCGATT+AGG 0.304455 4.1:+41474538 MS.gene09396:CDS
TCGATCTGTCTGATCGTTAC+TGG 0.309620 4.1:-41479554 None:intergenic
GACGGGTGTGATGTCTCTTT+TGG 0.311039 4.1:-41479522 None:intergenic
GATAAATTCGCAAGGGAGTT+TGG 0.312254 4.1:+41477353 MS.gene09396:CDS
GCTGACAGGTGGCCCTTAAA+AGG 0.314459 4.1:-41477155 None:intergenic
CAATTTGATTTGAATTTGCT+GGG 0.315001 4.1:-41478060 None:intergenic
GGGGCACAGGGGCCTCTTGG+CGG 0.324509 4.1:+41476067 MS.gene09396:CDS
CAGAATTGTCAACTTCATTC+AGG 0.324836 4.1:-41480215 None:intergenic
GCACAGGGGCCTCTTGGCGG+TGG 0.325849 4.1:+41476070 MS.gene09396:CDS
GACCGAAACCAGGTCGATTC+GGG 0.327399 4.1:-41474531 None:intergenic
AGCTCTTGATATTGCTTTGC+GGG 0.330942 4.1:+41475900 MS.gene09396:CDS
GTTCGTTCCTGCTCCGGTTC+CGG 0.336586 4.1:+41474318 MS.gene09396:CDS
CGACCGAAACCAGGTCGATT+CGG 0.337859 4.1:-41474532 None:intergenic
TTTGAATTTGCTGGGGCTAT+AGG 0.340543 4.1:-41478052 None:intergenic
ATACGTGTAACATAAGTTAT+TGG 0.343081 4.1:-41479944 None:intergenic
ATGGTGGAACGGTGCAATTT+TGG 0.343406 4.1:+41477834 MS.gene09396:CDS
TGGCTTTCTATCGATCAAAT+AGG 0.343799 4.1:+41478939 MS.gene09396:CDS
TTCCCGAATCGACCTGGTTT+CGG 0.347760 4.1:+41474529 MS.gene09396:CDS
CACGTGTTGTTTGATGAAAA+TGG 0.354538 4.1:+41479892 MS.gene09396:CDS
GAGAACAAAGGATCCTCTTC+TGG 0.357763 4.1:+41475644 MS.gene09396:CDS
TCTGATTCTGGTTCTGCAAC+GGG 0.359689 4.1:+41480234 MS.gene09396:CDS
AACGCGTCCGTCTCCGGCTC+TGG 0.361128 4.1:+41474396 MS.gene09396:CDS
AGCAATATCAAGAGCTTGTA+TGG 0.362662 4.1:-41475893 None:intergenic
GGCTTTGAAAATTAATGTTA+AGG 0.371295 4.1:+41478377 MS.gene09396:CDS
AAGGCTATTATCAAAGTCTT+AGG 0.374883 4.1:+41476107 MS.gene09396:CDS
CCAGTTGCAAGTTGTTGATA+AGG 0.376277 4.1:+41474591 MS.gene09396:CDS
TTATTTCTGCCCAGTCTTCT+CGG 0.376341 4.1:+41478766 MS.gene09396:CDS
TAAAACTTCCCCTTGGAATC+AGG 0.379083 4.1:-41478175 None:intergenic
CATATTCCATTGACCCATCC+TGG 0.403730 4.1:-41477562 None:intergenic
GTTGATGAAGCAGCGGTTAC+CGG 0.405895 4.1:-41474337 None:intergenic
AAAGCTGAGTAAGCAGTATC+TGG 0.406061 4.1:+41478347 MS.gene09396:CDS
TCAGGACGTGGCGGTCGTTC+CGG 0.407268 4.1:+41474250 MS.gene09396:CDS
GAACTCGAACCAGCGACAAC+CGG 0.409249 4.1:-41474367 None:intergenic
TGTACTCGTTCAGTGTCAAT+AGG 0.411529 4.1:+41480062 MS.gene09396:CDS
AAGTGAAGGGCAGTTTAGTC+AGG 0.411946 4.1:+41479094 MS.gene09396:CDS
TAATTTCTTCCCGAGAAGAC+TGG 0.413029 4.1:-41478776 None:intergenic
TCCGTCGTTCGTTCCTGCTC+CGG 0.415744 4.1:+41474312 MS.gene09396:CDS
ATAAAGTCAGTCACACGAAT+TGG 0.418108 4.1:-41476276 None:intergenic
TGCTTCATCAACCGCAGCTC+CGG 0.419718 4.1:+41474348 MS.gene09396:CDS
CCTTATCAACAACTTGCAAC+TGG 0.420040 4.1:-41474591 None:intergenic
GGTTGATTCCGGCGAGGATC+GGG 0.421348 4.1:-41474187 None:intergenic
TGCTCCAACGCGTCCGTCTC+CGG 0.427434 4.1:+41474390 MS.gene09396:CDS
CTTCTTCCTGCTCTCCAAGC+TGG 0.429812 4.1:+41476931 MS.gene09396:CDS
TCCGGCTCTGGCTCCGGCGA+CGG 0.430505 4.1:+41474408 MS.gene09396:CDS
GGTCGTTCCGGCGGTGGTCG+TGG 0.430541 4.1:+41474262 MS.gene09396:CDS
CAGACTCTTCCTCCCATCAT+AGG 0.434125 4.1:-41475564 None:intergenic
TTGCCGGAGAAGGTTGATTC+CGG 0.435195 4.1:-41474198 None:intergenic
AGCGAGCTCGGAATGCTAAT+AGG 0.438276 4.1:-41480188 None:intergenic
GAAGCAGCGGTTACCGGAAC+CGG 0.440441 4.1:-41474331 None:intergenic
TTCTTGATTGTCTAGGTTGG+TGG 0.441511 4.1:+41478476 MS.gene09396:intron
CAAATAGGTGTAAGCCTGAC+AGG 0.446112 4.1:+41478954 MS.gene09396:CDS
TAGCTCAAATATCATGGAAA+TGG 0.446302 4.1:+41477519 MS.gene09396:intron
TCCTGATCCTGGAGCATTGA+CGG 0.446980 4.1:-41474233 None:intergenic
TCCGTCAATGCTCCAGGATC+AGG 0.448591 4.1:+41474232 MS.gene09396:CDS
CGACCGCCACGTCCTGATCC+TGG 0.448660 4.1:-41474244 None:intergenic
AGAGCTTGTATGGTTTCATA+AGG 0.449833 4.1:-41475883 None:intergenic
GGGAGTTTGGTATCAATGTA+AGG 0.453555 4.1:+41477366 MS.gene09396:CDS
CTGTAAAATATAATCCTGTC+AGG 0.454056 4.1:-41478968 None:intergenic
AATCGCATTCCTGCCTATGA+TGG 0.457012 4.1:+41475551 MS.gene09396:CDS
TATTTCTGCCCAGTCTTCTC+GGG 0.457557 4.1:+41478767 MS.gene09396:CDS
GATATAGGTGGTGGCATCCA+TGG 0.459482 4.1:+41478713 MS.gene09396:intron
AAATTCCCTTGGATGGCAAA+TGG 0.464278 4.1:-41479706 None:intergenic
TCCGTCTCCGGCTCTGGCTC+CGG 0.465152 4.1:+41474402 MS.gene09396:CDS
CAACTGTAGCTCAAATATCA+TGG 0.467617 4.1:+41477513 MS.gene09396:intron
TAGCTTTGTCAAATTGAGCC+TGG 0.468632 4.1:+41477090 MS.gene09396:intron
CGTGGCGGTCGTTCCGGCGG+TGG 0.470605 4.1:+41474256 MS.gene09396:CDS
GTCGACCCTGCCCTCCGTAA+TGG 0.472720 4.1:+41480281 MS.gene09396:CDS
ACGGATGACTGTGAAATTGC+CGG 0.474459 4.1:-41474214 None:intergenic
GAAACTGTGTAAGATGGTTA+AGG 0.474807 4.1:-41475837 None:intergenic
TCACTTCCAGCTTGGAGAGC+AGG 0.475116 4.1:-41476937 None:intergenic
GCGGTTACCGGAACCGGAGC+AGG 0.475296 4.1:-41474325 None:intergenic
GAAAGCCTTGAGAGGTCTTA+GGG 0.475335 4.1:+41476547 MS.gene09396:CDS
AAGCTTACTGCAGCTATTGA+AGG 0.477181 4.1:-41478614 None:intergenic
AAGTCTTAGGCCTACGCAGA+TGG 0.478310 4.1:+41476120 MS.gene09396:CDS
TCCTTTACCCTTTACTTCGA+AGG 0.478346 4.1:+41475598 MS.gene09396:CDS
ACCGTCGCCGGAGCCAGAGC+CGG 0.483822 4.1:-41474409 None:intergenic
ACCGCAGCTCCGGTTGTCGC+TGG 0.486044 4.1:+41474358 MS.gene09396:CDS
CAAACAACATACTATTCCCT+TGG 0.487493 4.1:-41477924 None:intergenic
TTGGCGGTGGGACCGAGTAT+TGG 0.487545 4.1:+41476083 MS.gene09396:CDS
CAGTCATCCGTCAATGCTCC+AGG 0.487845 4.1:+41474226 MS.gene09396:CDS
TTGAACCCAGGATGGGTCAA+TGG 0.488108 4.1:+41477556 MS.gene09396:CDS
CACAGGGGCCTCTTGGCGGT+GGG 0.490050 4.1:+41476071 MS.gene09396:CDS
TTCTGATTCTGGTTCTGCAA+CGG 0.491640 4.1:+41480233 MS.gene09396:CDS
CCCCTGTAGTTTGTGACTTG+AGG 0.491974 4.1:-41478741 None:intergenic
AGGAAGAGTCTGTTTACTGC+TGG 0.493513 4.1:+41475575 MS.gene09396:CDS
AGGTTGATTCCGGCGAGGAT+CGG 0.493592 4.1:-41474188 None:intergenic
CTTCCTAATCGACCGAAACC+AGG 0.494069 4.1:-41474541 None:intergenic
ATGCACCGAGAGTCCATGCT+TGG 0.495472 4.1:+41475527 MS.gene09396:CDS
GGCCTCAAGTCACAAACTAC+AGG 0.497429 4.1:+41478739 MS.gene09396:CDS
TGTTTCAGATGTTTCTTCGA+GGG 0.503034 4.1:+41476242 MS.gene09396:intron
CTCTTCCTCCCATCATAGGC+AGG 0.504888 4.1:-41475560 None:intergenic
GCTTGGAGAGCAGGAAGAAG+TGG 0.507731 4.1:-41476928 None:intergenic
AACTCCGCACAAAATTGAGT+TGG 0.508580 4.1:-41477884 None:intergenic
CATCTCATGGAGGTAACATA+AGG 0.509994 4.1:+41476576 MS.gene09396:CDS
ACTTTCTTTGAAGTAATGTC+CGG 0.510017 4.1:-41475473 None:intergenic
GAAGGAGACGAATCTTCTCC+TGG 0.510290 4.1:-41478596 None:intergenic
GCCTCGTGTCACTTCCAGCT+TGG 0.511628 4.1:-41476945 None:intergenic
GCGTGAACCACGACCACCGC+CGG 0.511877 4.1:-41474269 None:intergenic
ATAATAGCCTTTCCAATACT+CGG 0.513769 4.1:-41476095 None:intergenic
GCAGGAACGAACGACGGAGA+TGG 0.514418 4.1:-41474307 None:intergenic
ACTCCGCACAAAATTGAGTT+GGG 0.514577 4.1:-41477883 None:intergenic
TTGTTTCAGATGTTTCTTCG+AGG 0.515385 4.1:+41476241 MS.gene09396:intron
TTCAGCACCGTCGTCTCAGA+AGG 0.516408 4.1:+41474498 MS.gene09396:CDS
GTTGGTTTATCAGTTAAAAG+AGG 0.517621 4.1:-41478539 None:intergenic
TTGTAGAAAGTGGTTAATGG+TGG 0.517696 4.1:+41477818 MS.gene09396:intron
CTCGCCGCCTTCTGAGACGA+CGG 0.519011 4.1:-41474505 None:intergenic
AAGCTCTTGATATTGCTTTG+CGG 0.519240 4.1:+41475899 MS.gene09396:CDS
GAGGCCTATGTTTGTTCCAA+TGG 0.522707 4.1:+41476963 MS.gene09396:CDS
GCCTATGTTTGTTCCAATGG+AGG 0.526859 4.1:+41476966 MS.gene09396:CDS
CAATATTGCTACATTTCAGA+TGG 0.528347 4.1:-41475928 None:intergenic
CATTCAGGTAGTAGCGAGCT+CGG 0.530200 4.1:-41480200 None:intergenic
CGAAGTGGAAATATAATGCC+AGG 0.530958 4.1:+41479574 MS.gene09396:CDS
GCGAGGTTCCCGAATCGACC+TGG 0.531373 4.1:+41474523 MS.gene09396:CDS
TCTCTGATGAGGACGCTGAC+AGG 0.531789 4.1:-41477169 None:intergenic
TTGTGCATAGTGGAATGATA+AGG 0.532840 4.1:+41478841 MS.gene09396:CDS
TTTATCTGAACAGCCATGCT+GGG 0.535692 4.1:+41479733 MS.gene09396:CDS
TGTAAGGGAGGAACTTGCAT+TGG 0.538232 4.1:+41477382 MS.gene09396:CDS
AATAGGTGTGCATAGTAAGC+TGG 0.538383 4.1:-41480171 None:intergenic
GTTAGAGTCGACTTCGGCGG+CGG 0.538515 4.1:+41474474 MS.gene09396:CDS
ATCTGTCTGATCGTTACTGG+TGG 0.539468 4.1:-41479551 None:intergenic
TGCACCGAGAGTCCATGCTT+GGG 0.542844 4.1:+41475528 MS.gene09396:CDS
ACCTTCGAAGTAAAGGGTAA+AGG 0.543124 4.1:-41475599 None:intergenic
ACACATCCATTTGCCATCCA+AGG 0.545234 4.1:+41479700 MS.gene09396:CDS
AATTTCTTCCCGAGAAGACT+GGG 0.549883 4.1:-41478775 None:intergenic
TCGCCGGAATCAACCTTCTC+CGG 0.550884 4.1:+41474195 MS.gene09396:CDS
CTGGTTTCGGTCGATTAGGA+AGG 0.552622 4.1:+41474542 MS.gene09396:CDS
AGGTGGTGGCATCCATGGAT+TGG 0.552911 4.1:+41478718 MS.gene09396:intron
GACGAATCTTCTCCTGGCTG+AGG 0.553051 4.1:-41478590 None:intergenic
ATCGCATTCCTGCCTATGAT+GGG 0.554809 4.1:+41475552 MS.gene09396:CDS
GGTTAATATGTGTCAAGCCA+AGG 0.555165 4.1:+41477907 MS.gene09396:CDS
ACCACCACAAAAGTAACTCT+TGG 0.557160 4.1:-41479499 None:intergenic
TGCTCACGTTAGATCTCTGA+GGG 0.557398 4.1:-41476630 None:intergenic
CTAACAATCCCGATCCTCGC+CGG 0.557507 4.1:+41474179 MS.gene09396:CDS
TCCGCACCAAATATGATCGT+TGG 0.560892 4.1:-41478557 None:intergenic
GCCGGAGCCAGAGCCGGAGA+CGG 0.563910 4.1:-41474403 None:intergenic
CTAACCATAAAACTTCCCCT+TGG 0.564193 4.1:-41478182 None:intergenic
ATATCACTTTCTCTCTGATG+AGG 0.564894 4.1:-41477180 None:intergenic
AGTCTTAGGCCTACGCAGAT+GGG 0.565265 4.1:+41476121 MS.gene09396:CDS
AGATGTAATACCAATGTTGA+GGG 0.565787 4.1:-41476149 None:intergenic
ATATTCCATTGACCCATCCT+GGG 0.566036 4.1:-41477561 None:intergenic
ATCAGAGATGGAGTAAGTGA+AGG 0.566585 4.1:+41479080 MS.gene09396:intron
AATTAAGTTTGCTTCACAGA+CGG 0.568303 4.1:+41475813 MS.gene09396:CDS
GGGCAGGGTCGACACAAAGT+TGG 0.570242 4.1:-41480271 None:intergenic
TCAGAGATGGAGTAAGTGAA+GGG 0.571301 4.1:+41479081 MS.gene09396:intron
CGTGTATGTGAAACAAGACT+AGG 0.573058 4.1:+41478288 MS.gene09396:CDS
TACTGAAGTGCCGAGTTCTG+AGG 0.573301 4.1:+41474435 MS.gene09396:CDS
CACATCCATTTGCCATCCAA+GGG 0.574500 4.1:+41479701 MS.gene09396:CDS
GGTTCAATCTAGAAAAGCTA+AGG 0.574538 4.1:-41477862 None:intergenic
CTTAGGGTAAGAACATCTCA+TGG 0.576640 4.1:+41476563 MS.gene09396:CDS
CAGAGAGGAATTGTGCATAG+TGG 0.576890 4.1:+41478831 MS.gene09396:CDS
CGTTACTGGTGGGAAAGAGA+CGG 0.576902 4.1:-41479540 None:intergenic
GTTACTGGTGGGAAAGAGAC+GGG 0.577252 4.1:-41479539 None:intergenic
TATGCACAATTCCTCTCTGT+GGG 0.580225 4.1:-41478827 None:intergenic
TGGTAGATTGTGAAGCAGCA+CGG 0.582847 4.1:+41477320 MS.gene09396:intron
CTATGCACAATTCCTCTCTG+TGG 0.583772 4.1:-41478828 None:intergenic
CTCAAATATCATGGAAATGG+CGG 0.584551 4.1:+41477522 MS.gene09396:CDS
ACCTCCATTGGAACAAACAT+AGG 0.585309 4.1:-41476967 None:intergenic
ACCGGAGCAGGAACGAACGA+CGG 0.586525 4.1:-41474313 None:intergenic
GATGTAACACATCCTCAGCC+AGG 0.587280 4.1:+41478578 MS.gene09396:CDS
GATTCCCAAGCATGGACTCT+CGG 0.588371 4.1:-41475532 None:intergenic
AGCTTGATGACCAAGTAACT+CGG 0.588683 4.1:+41476854 MS.gene09396:CDS
GACGGAGAAACTGTGTAAGA+TGG 0.590806 4.1:-41475843 None:intergenic
TCTTACCCTAAGACCTCTCA+AGG 0.591613 4.1:-41476552 None:intergenic
GCCTCAAGTCACAAACTACA+GGG 0.591714 4.1:+41478740 MS.gene09396:CDS
AACAACACGTGATAATGAGT+TGG 0.595328 4.1:-41479880 None:intergenic
CAGATCAAGAAAGCCTTGAG+AGG 0.596098 4.1:+41476539 MS.gene09396:intron
GTCAAATTGAGCCTGGACAA+AGG 0.596533 4.1:+41477097 MS.gene09396:CDS
GACTGTGAAATTGCCGGAGA+AGG 0.596553 4.1:-41474208 None:intergenic
ATGGGATTGTCCCTCAACAT+TGG 0.597005 4.1:+41476139 MS.gene09396:CDS
CTGATGAGGACGCTGACAGG+TGG 0.597425 4.1:-41477166 None:intergenic
AGAGCCGGAGACGGACGCGT+TGG 0.597779 4.1:-41474394 None:intergenic
TGAGATGGATGCGATTCGAA+AGG 0.602122 4.1:+41479127 MS.gene09396:CDS
CTCCGTAATGGAAAATGTCA+AGG 0.602962 4.1:+41480293 MS.gene09396:CDS
GTTAATATGTGTCAAGCCAA+GGG 0.603461 4.1:+41477908 MS.gene09396:CDS
TACTTCAAAGAAAGTGTCAA+GGG 0.604374 4.1:+41475481 MS.gene09396:CDS
TCACGCGTCAGAACCAGAAG+AGG 0.605491 4.1:-41475657 None:intergenic
GACAATCTAGCTGCAAGCGA+CGG 0.605809 4.1:-41475861 None:intergenic
ACCAGCGACAACCGGAGCTG+CGG 0.606283 4.1:-41474359 None:intergenic
TTACTTCAAAGAAAGTGTCA+AGG 0.610232 4.1:+41475480 MS.gene09396:CDS
AGCACCGTCGTCTCAGAAGG+CGG 0.611523 4.1:+41474501 MS.gene09396:CDS
GGACGTGGCGGTCGTTCCGG+CGG 0.613363 4.1:+41474253 MS.gene09396:CDS
TCAACGCAGATAAATTCGCA+AGG 0.614282 4.1:+41477345 MS.gene09396:CDS
AGGGACAATCCCATCTGCGT+AGG 0.615913 4.1:-41476130 None:intergenic
GGAGTTTGGTATCAATGTAA+GGG 0.616676 4.1:+41477367 MS.gene09396:CDS
GGCGGTGGTCGTGGTTCACG+CGG 0.616726 4.1:+41474271 MS.gene09396:CDS
TAAGCAGTATCTGGAGAATG+TGG 0.618019 4.1:+41478356 MS.gene09396:CDS
ATAAGGAGTTACAAGGTGAC+CGG 0.621304 4.1:+41476593 MS.gene09396:CDS
AATGCTCCAGGATCAGGACG+TGG 0.621623 4.1:+41474238 MS.gene09396:CDS
AGGAATGCGATTCCCAAGCA+TGG 0.621773 4.1:-41475540 None:intergenic
GCTGGGGCTATAGGTACCAA+AGG 0.622248 4.1:-41478043 None:intergenic
CTAGGTTGGTGGCCGCAACA+CGG 0.623318 4.1:+41478487 MS.gene09396:intron
TACGTTAGAGTCGACTTCGG+CGG 0.624594 4.1:+41474471 MS.gene09396:CDS
TGTGACTTGAGGCCAATCCA+TGG 0.625807 4.1:-41478730 None:intergenic
TCTGTCTGATCGTTACTGGT+GGG 0.626280 4.1:-41479550 None:intergenic
TAGATGTAATACCAATGTTG+AGG 0.632415 4.1:-41476150 None:intergenic
AATTTGATTTGAATTTGCTG+GGG 0.632936 4.1:-41478059 None:intergenic
TACTCGGTCCCACCGCCAAG+AGG 0.633958 4.1:-41476079 None:intergenic
AGGTAACATAAGGAGTTACA+AGG 0.635277 4.1:+41476586 MS.gene09396:CDS
GTCTGATCAAGATCGTGTCA+AGG 0.636610 4.1:+41476335 MS.gene09396:CDS
GAAATTAGACAAGAACTGCA+AGG 0.642526 4.1:+41478096 MS.gene09396:CDS
TTGCTCACGTTAGATCTCTG+AGG 0.643318 4.1:-41476631 None:intergenic
ACCAACGATCATATTTGGTG+CGG 0.645618 4.1:+41478556 MS.gene09396:CDS
CAACGCAGATAAATTCGCAA+GGG 0.647937 4.1:+41477346 MS.gene09396:CDS
GGTGGGACCGAGTATTGGAA+AGG 0.649686 4.1:+41476088 MS.gene09396:CDS
TCAACAATGTCTCGTCGCGG+TGG 0.656219 4.1:+41474154 None:intergenic
AACGATCAGACAGATCGAAG+TGG 0.657837 4.1:+41479559 MS.gene09396:CDS
ACTTCAGTAGAAACCGTCGC+CGG 0.657971 4.1:-41474421 None:intergenic
AGCTGCGGTTGATGAAGCAG+CGG 0.658325 4.1:-41474344 None:intergenic
GCTTACGTTAGAGTCGACTT+CGG 0.662359 4.1:+41474468 MS.gene09396:CDS
GTTTGGTATCAATGTAAGGG+AGG 0.663754 4.1:+41477370 MS.gene09396:CDS
CGTCGTCTCAGAAGGCGGCG+AGG 0.664450 4.1:+41474506 MS.gene09396:CDS
CATCATGCAATACCGTGTTG+CGG 0.665340 4.1:-41478499 None:intergenic
TCCAAGCTGGAAGTGACACG+AGG 0.671814 4.1:+41476944 MS.gene09396:CDS
AGGTGTGCATAGTAAGCTGG+AGG 0.673538 4.1:-41480168 None:intergenic
GCATTCCTGCCTATGATGGG+AGG 0.673728 4.1:+41475555 MS.gene09396:CDS
GTATTACTTGAATCCCAGCA+TGG 0.677912 4.1:-41479746 None:intergenic
GGTGGTCGTGGTTCACGCGG+CGG 0.681327 4.1:+41474274 MS.gene09396:CDS
ATCTCAACAATGTCTCGTCG+CGG 0.683866 4.1:+41474151 None:intergenic
GAAAGTGGTTAATGGTGGAA+CGG 0.685447 4.1:+41477823 MS.gene09396:intron
AAATTGGTTGATGAGAACAA+AGG 0.692645 4.1:+41475632 MS.gene09396:CDS
AAACCTAGGTATACCATCGG+GGG 0.696729 4.1:-41477425 None:intergenic
ACAACAGAACACCCACAGAG+AGG 0.699471 4.1:+41478816 MS.gene09396:CDS
GCTCCAGGATCAGGACGTGG+CGG 0.701530 4.1:+41474241 MS.gene09396:CDS
ACACGATCTTGATCAGACAG+TGG 0.708085 4.1:-41476330 None:intergenic
TCAGGTATACTGTTTCAGGG+AGG 0.708179 4.1:+41476023 MS.gene09396:intron
TAAACCTAGGTATACCATCG+GGG 0.713081 4.1:-41477426 None:intergenic
GGAGAAGGTTGATTCCGGCG+AGG 0.723977 4.1:-41474193 None:intergenic
CCTCAAGTCACAAACTACAG+GGG 0.739317 4.1:+41478741 MS.gene09396:CDS
AGGGTAAGAACATCTCATGG+AGG 0.760488 4.1:+41476566 MS.gene09396:CDS
GCTCACGTTAGATCTCTGAG+GGG 0.790107 4.1:-41476629 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTATTTTAAACATTTAAAT+TGG + chr4.1:41479439-41479458 MS.gene09396:intron 10.0%
!! AAAAAAATTGAAAAAAAACC+TGG - chr4.1:41479595-41479614 None:intergenic 15.0%
!! AATTGAAAAAAGAAAATATG+AGG - chr4.1:41480027-41480046 None:intergenic 15.0%
!! ATCAGTAAATATAGATAAAT+TGG - chr4.1:41479642-41479661 None:intergenic 15.0%
!! ATTGAAAAAAGAAAATATGA+GGG - chr4.1:41480026-41480045 None:intergenic 15.0%
!! TAGTTAAATTATGTTTCATA+TGG - chr4.1:41480124-41480143 None:intergenic 15.0%
!!! AATTTCAAACATATTGTTTT+AGG + chr4.1:41474871-41474890 MS.gene09396:intron 15.0%
!!! ATTTTAAGTTGAATTTTTCA+AGG + chr4.1:41476307-41476326 MS.gene09396:CDS 15.0%
!!! CTATGTTTTTTTATTTAATG+AGG + chr4.1:41476391-41476410 MS.gene09396:intron 15.0%
!!! GATTTTTCTTTTAATTTTCA+GGG + chr4.1:41478907-41478926 MS.gene09396:intron 15.0%
!!! TGATTTTTCTTTTAATTTTC+AGG + chr4.1:41478906-41478925 MS.gene09396:intron 15.0%
!!! TTACGTTCATTTTTTTTTTT+TGG + chr4.1:41474767-41474786 MS.gene09396:intron 15.0%
!! AAAAGAAATGTCAATTATGA+GGG - chr4.1:41477298-41477317 None:intergenic 20.0%
!! AAAGTCCAAATTAAATTTGA+AGG + chr4.1:41478213-41478232 MS.gene09396:intron 20.0%
!! AAGTAGAAAAATAAATGAAG+AGG - chr4.1:41479973-41479992 None:intergenic 20.0%
!! CAAGTTAAATAAAATTCAAG+AGG - chr4.1:41477682-41477701 None:intergenic 20.0%
!! CAGAAGTTATATATTTATAC+AGG + chr4.1:41477246-41477265 MS.gene09396:intron 20.0%
!! CGTAATCAAGAAAAAAAAAT+CGG - chr4.1:41474752-41474771 None:intergenic 20.0%
!! CTATTTATTGGATAATAACT+TGG - chr4.1:41478404-41478423 None:intergenic 20.0%
!!! AAATTTTGGTTATTGTTTTC+AGG + chr4.1:41475439-41475458 MS.gene09396:intron 20.0%
!!! AACTCAAATTTTTATTGTTC+AGG + chr4.1:41475082-41475101 MS.gene09396:intron 20.0%
!!! AGCTTTATTTTTACAACTTT+AGG + chr4.1:41476791-41476810 MS.gene09396:intron 20.0%
!!! ATAAGAATTTGTTGTTAACA+TGG + chr4.1:41475702-41475721 MS.gene09396:intron 20.0%
!!! ATTTTATTAAGCATAAACCT+AGG - chr4.1:41477442-41477461 None:intergenic 20.0%
!!! TGTTTTTTGTGTTCTTTATT+TGG + chr4.1:41475949-41475968 MS.gene09396:intron 20.0%
!!! TTGTAATTTGTTATCCATTT+AGG + chr4.1:41476827-41476846 MS.gene09396:intron 20.0%
!!! TTTGATTTGAAACATGTTTT+AGG + chr4.1:41474908-41474927 MS.gene09396:intron 20.0%
!!! TTTTGTTGTTTGTTTTCAAA+GGG + chr4.1:41479172-41479191 MS.gene09396:intron 20.0%
!!! TTTTGTTTATCATGTTGATT+TGG + chr4.1:41474968-41474987 MS.gene09396:intron 20.0%
! AAAGAAATGTCAATTATGAG+GGG - chr4.1:41477297-41477316 None:intergenic 25.0%
! AAAGAGGTTGTCAAAATTAT+TGG - chr4.1:41477986-41478005 None:intergenic 25.0%
! AACAATTTAACCATTGTCAT+AGG - chr4.1:41477776-41477795 None:intergenic 25.0%
! AACGAATTATAAGTAGATCA+TGG - chr4.1:41476431-41476450 None:intergenic 25.0%
! AAGAGGTTGTCAAAATTATT+GGG - chr4.1:41477985-41478004 None:intergenic 25.0%
! AGATAAAAATCAAATTCCCT+TGG - chr4.1:41479720-41479739 None:intergenic 25.0%
! AGTAAGTTAACAATGTGTTA+TGG + chr4.1:41475402-41475421 MS.gene09396:intron 25.0%
! ATACGTGTAACATAAGTTAT+TGG - chr4.1:41479947-41479966 None:intergenic 25.0%
! CCAAACCTTCAAATTTAATT+TGG - chr4.1:41478221-41478240 None:intergenic 25.0%
! CCAAATTAAATTTGAAGGTT+TGG + chr4.1:41478218-41478237 MS.gene09396:intron 25.0%
! CCACTTTCTACAAAATAAAA+AGG - chr4.1:41477811-41477830 None:intergenic 25.0%
! GAAAAACAAAGACATTCAAA+TGG - chr4.1:41479846-41479865 None:intergenic 25.0%
! GAAAACAAACAACAAAAGTA+TGG - chr4.1:41479169-41479188 None:intergenic 25.0%
! GAAAAGAAATGTCAATTATG+AGG - chr4.1:41477299-41477318 None:intergenic 25.0%
! GAGAGAAAGTGATATTAAAA+AGG + chr4.1:41477188-41477207 MS.gene09396:CDS 25.0%
! GTAAAAATAAAGCTTAGTCA+TGG - chr4.1:41476785-41476804 None:intergenic 25.0%
! TATATCATTCTTGATTGTCT+AGG + chr4.1:41478469-41478488 MS.gene09396:intron 25.0%
! TATCCAATAAATAGTATGCT+TGG + chr4.1:41478410-41478429 MS.gene09396:intron 25.0%
! TGAATGCTTTCAAATTATTG+TGG + chr4.1:41477618-41477637 MS.gene09396:intron 25.0%
! TTTCTATATTCTTTGTGTTG+AGG + chr4.1:41478877-41478896 MS.gene09396:intron 25.0%
!! AAACATTTAAATTGGTTCTC+AGG + chr4.1:41479447-41479466 MS.gene09396:intron 25.0%
!! AAAGCATTCATACAAAAAGA+AGG - chr4.1:41477608-41477627 None:intergenic 25.0%
!! AAATCAGTTACATTGTGTTT+TGG + chr4.1:41475002-41475021 MS.gene09396:intron 25.0%
!! AATACATCACAACAGATTTT+AGG - chr4.1:41477065-41477084 None:intergenic 25.0%
!! ATAATTGACATTTCTTTTCC+TGG + chr4.1:41477300-41477319 MS.gene09396:intron 25.0%
!! ATGATTTGAAACTATAATGC+TGG + chr4.1:41475128-41475147 MS.gene09396:intron 25.0%
!! ATTTGAAGTGTTTATGTTGT+AGG + chr4.1:41474832-41474851 MS.gene09396:intron 25.0%
!! ATTTTGTAGAAAGTGGTTAA+TGG + chr4.1:41477815-41477834 MS.gene09396:intron 25.0%
!! GAAGGTTTTTGTGATTAAAT+TGG + chr4.1:41475616-41475635 MS.gene09396:CDS 25.0%
!! GTTCATTGAAATTTTGTCAA+AGG + chr4.1:41479666-41479685 MS.gene09396:intron 25.0%
!! TAATTTGTGATTATCAGAGA+TGG + chr4.1:41479068-41479087 MS.gene09396:intron 25.0%
!! TTTCAATTTTCAGTTATGCA+AGG + chr4.1:41480039-41480058 MS.gene09396:intron 25.0%
!!! AACTCAAATTAAAAGTGTTC+AGG + chr4.1:41475338-41475357 MS.gene09396:intron 25.0%
!!! AATTTGATTTGAATTTGCTG+GGG - chr4.1:41478062-41478081 None:intergenic 25.0%
!!! CAATTTGATTTGAATTTGCT+GGG - chr4.1:41478063-41478082 None:intergenic 25.0%
!!! CCTTTTTATTTTGTAGAAAG+TGG + chr4.1:41477808-41477827 MS.gene09396:intron 25.0%
!!! CTTTTGTTGTTTGTTTTCAA+AGG + chr4.1:41479171-41479190 MS.gene09396:intron 25.0%
!!! GGCTTTGAAAATTAATGTTA+AGG + chr4.1:41478377-41478396 MS.gene09396:CDS 25.0%
!!! TCAATTTGATTTGAATTTGC+TGG - chr4.1:41478064-41478083 None:intergenic 25.0%
!!! TTGAATGTCTTTGTTTTTCA+GGG + chr4.1:41479847-41479866 MS.gene09396:intron 25.0%
!!! TTTGAATGTCTTTGTTTTTC+AGG + chr4.1:41479846-41479865 MS.gene09396:intron 25.0%
AAAAATCAAATTCCCTTGGA+TGG - chr4.1:41479716-41479735 None:intergenic 30.0%
AAGAAAACTGGTATTAGAAC+TGG - chr4.1:41476512-41476531 None:intergenic 30.0%
AAGAAATGTCAATTATGAGG+GGG - chr4.1:41477296-41477315 None:intergenic 30.0%
AAGGCTATTATCAAAGTCTT+AGG + chr4.1:41476107-41476126 MS.gene09396:CDS 30.0%
ACAAAAACCTTCGAAGTAAA+GGG - chr4.1:41475608-41475627 None:intergenic 30.0%
ACTGCTTAATTCTATCTACA+AGG - chr4.1:41479355-41479374 None:intergenic 30.0%
AGATGTAATACCAATGTTGA+GGG - chr4.1:41476152-41476171 None:intergenic 30.0%
ATAATAGCCTTTCCAATACT+CGG - chr4.1:41476098-41476117 None:intergenic 30.0%
ATACAGGCATAGAAAGTTAA+TGG - chr4.1:41479781-41479800 None:intergenic 30.0%
CAATATTGCTACATTTCAGA+TGG - chr4.1:41475931-41475950 None:intergenic 30.0%
CTGTAAAATATAATCCTGTC+AGG - chr4.1:41478971-41478990 None:intergenic 30.0%
GAACCAAGCATACTATTTAT+TGG - chr4.1:41478416-41478435 None:intergenic 30.0%
GATAAACCAACGATCATATT+TGG + chr4.1:41478551-41478570 MS.gene09396:CDS 30.0%
TAGATGTAATACCAATGTTG+AGG - chr4.1:41476153-41476172 None:intergenic 30.0%
TAGATTCTTTCCTATGACAA+TGG + chr4.1:41477763-41477782 MS.gene09396:intron 30.0%
TAGCTCAAATATCATGGAAA+TGG + chr4.1:41477519-41477538 MS.gene09396:intron 30.0%
TGAGCGTAATCAAAATTTAC+CGG - chr4.1:41475037-41475056 None:intergenic 30.0%
TGGTAAGTTACTATGTGTTA+CGG + chr4.1:41475148-41475167 MS.gene09396:intron 30.0%
TTAATTGCTGCAGAAACATT+TGG - chr4.1:41479268-41479287 None:intergenic 30.0%
TTGCACATAACTATGCAAAA+AGG - chr4.1:41478642-41478661 None:intergenic 30.0%
! AAATTTTGTCAAAGGAACTG+TGG + chr4.1:41479674-41479693 MS.gene09396:intron 30.0%
! AATTAAGTTTGCTTCACAGA+CGG + chr4.1:41475813-41475832 MS.gene09396:CDS 30.0%
! AGCAAGTAACAAACCTTTTA+AGG + chr4.1:41477142-41477161 MS.gene09396:CDS 30.0%
! ATAGTGGAATGATAAGGTAA+TGG + chr4.1:41478847-41478866 MS.gene09396:intron 30.0%
! CAGGATTATATTTTACAGGT+TGG + chr4.1:41478973-41478992 MS.gene09396:intron 30.0%
! CTGACAGGATTATATTTTAC+AGG + chr4.1:41478969-41478988 MS.gene09396:CDS 30.0%
! CTGATTTTATCTTTTGTCAC+AGG + chr4.1:41475761-41475780 MS.gene09396:intron 30.0%
! CTTTGCTTGTTGAATGATAT+AGG + chr4.1:41478698-41478717 MS.gene09396:intron 30.0%
! GCAAGTAACAAACCTTTTAA+GGG + chr4.1:41477143-41477162 MS.gene09396:CDS 30.0%
! GTTGGTTTATCAGTTAAAAG+AGG - chr4.1:41478542-41478561 None:intergenic 30.0%
! TACTCAAATTTGAAGTGTTC+AGG + chr4.1:41475212-41475231 MS.gene09396:intron 30.0%
! TGTTGTTGTTGATGTTGATT+TGG + chr4.1:41475237-41475256 MS.gene09396:intron 30.0%
! TTAAGAGAGGCTGAAAATTT+TGG + chr4.1:41475425-41475444 MS.gene09396:intron 30.0%
! TTGCTCTTCGTTTAATCTTT+TGG - chr4.1:41477127-41477146 None:intergenic 30.0%
!! AAATTGGTTGATGAGAACAA+AGG + chr4.1:41475632-41475651 MS.gene09396:CDS 30.0%
!! ACTTTCTTTGAAGTAATGTC+CGG - chr4.1:41475476-41475495 None:intergenic 30.0%
!! ATGTTCTGCATATTGTTTTG+TGG + chr4.1:41477026-41477045 MS.gene09396:intron 30.0%
!! GTTGATCTGAAACATGTTTT+AGG + chr4.1:41474945-41474964 MS.gene09396:intron 30.0%
!! TAATCGATAAACTGCTTTTC+AGG + chr4.1:41476005-41476024 MS.gene09396:intron 30.0%
!! TACTTCAAAGAAAGTGTCAA+GGG + chr4.1:41475481-41475500 MS.gene09396:CDS 30.0%
!! TATATTTTACAGGTTGGACT+TGG + chr4.1:41478979-41478998 MS.gene09396:intron 30.0%
!! TTACTTCAAAGAAAGTGTCA+AGG + chr4.1:41475480-41475499 MS.gene09396:CDS 30.0%
!!! ATTTGGTTTTGCTGATTTTG+TGG + chr4.1:41475966-41475985 MS.gene09396:intron 30.0%
!!! CAATTTTTTTCCGAGTTACT+TGG - chr4.1:41476867-41476886 None:intergenic 30.0%
!!! TGAATGTCTTTGTTTTTCAG+GGG + chr4.1:41479848-41479867 MS.gene09396:intron 30.0%
!!! TTTTCAGGTATACTGTTTCA+GGG + chr4.1:41476020-41476039 MS.gene09396:intron 30.0%
AAAGGTTACTGATCTGTTTG+GGG + chr4.1:41476745-41476764 MS.gene09396:intron 35.0%
AACAGTTGCAGTCTATCTTT+CGG - chr4.1:41478142-41478161 None:intergenic 35.0%
AAGCTCTTGATATTGCTTTG+CGG + chr4.1:41475899-41475918 MS.gene09396:CDS 35.0%
AAGGATCTCTGTTGAAAATC+TGG - chr4.1:41478027-41478046 None:intergenic 35.0%
ACAAAGGTTACTGATCTGTT+TGG + chr4.1:41476743-41476762 MS.gene09396:intron 35.0%
AGAAATGTCAATTATGAGGG+GGG - chr4.1:41477295-41477314 None:intergenic 35.0%
AGAGCTTGTATGGTTTCATA+AGG - chr4.1:41475886-41475905 None:intergenic 35.0%
AGCAATATCAAGAGCTTGTA+TGG - chr4.1:41475896-41475915 None:intergenic 35.0%
AGGTAACATAAGGAGTTACA+AGG + chr4.1:41476586-41476605 MS.gene09396:CDS 35.0%
ATAAACCTAGGTATACCATC+GGG - chr4.1:41477430-41477449 None:intergenic 35.0%
ATAAAGTCAGTCACACGAAT+TGG - chr4.1:41476279-41476298 None:intergenic 35.0%
ATATCACTTTCTCTCTGATG+AGG - chr4.1:41477183-41477202 None:intergenic 35.0%
ATCTGACAGAGTAAGAAAAC+TGG - chr4.1:41476524-41476543 None:intergenic 35.0%
ATGTCACACACACAACAATT+GGG + chr4.1:41479207-41479226 MS.gene09396:intron 35.0%
ATTGAGCAACTAGAACATAC+AGG - chr4.1:41479797-41479816 None:intergenic 35.0%
CAAACAACATACTATTCCCT+TGG - chr4.1:41477927-41477946 None:intergenic 35.0%
CAAAGGTTACTGATCTGTTT+GGG + chr4.1:41476744-41476763 MS.gene09396:intron 35.0%
CAACTGTAGCTCAAATATCA+TGG + chr4.1:41477513-41477532 MS.gene09396:intron 35.0%
CAATGTGTTATGGTTAAGAG+AGG + chr4.1:41475412-41475431 MS.gene09396:intron 35.0%
CACAAAAACCTTCGAAGTAA+AGG - chr4.1:41475609-41475628 None:intergenic 35.0%
CAGAATTGTCAACTTCATTC+AGG - chr4.1:41480218-41480237 None:intergenic 35.0%
CATAAACCTAGGTATACCAT+CGG - chr4.1:41477431-41477450 None:intergenic 35.0%
CATGATATTTGAGCTACAGT+TGG - chr4.1:41477515-41477534 None:intergenic 35.0%
CTCAAATATCATGGAAATGG+CGG + chr4.1:41477522-41477541 MS.gene09396:CDS 35.0%
GAAACTGTGTAAGATGGTTA+AGG - chr4.1:41475840-41475859 None:intergenic 35.0%
GAAATTAGACAAGAACTGCA+AGG + chr4.1:41478096-41478115 MS.gene09396:CDS 35.0%
GAAGAAAACTAGACTTAGCA+TGG - chr4.1:41476469-41476488 None:intergenic 35.0%
GAAGTTGACAATTCTGATTC+TGG + chr4.1:41480222-41480241 MS.gene09396:CDS 35.0%
GAGATTCAAAAATTGAACCC+AGG + chr4.1:41477544-41477563 MS.gene09396:CDS 35.0%
GATCAGTAACCTTTGTAACT+TGG - chr4.1:41476739-41476758 None:intergenic 35.0%
GGAGTTTGGTATCAATGTAA+GGG + chr4.1:41477367-41477386 MS.gene09396:CDS 35.0%
GGTTCAATCTAGAAAAGCTA+AGG - chr4.1:41477865-41477884 None:intergenic 35.0%
GTGATACTTCCAAGTTACAA+AGG + chr4.1:41476727-41476746 MS.gene09396:intron 35.0%
GTTAATATGTGTCAAGCCAA+GGG + chr4.1:41477908-41477927 MS.gene09396:CDS 35.0%
TAGTAAGTAACACTGTGTCA+TGG + chr4.1:41475270-41475289 MS.gene09396:intron 35.0%
TATTAGAACTGGACTTAGCA+AGG - chr4.1:41476501-41476520 None:intergenic 35.0%
TCAAAAATTGAACCCAGGAT+GGG + chr4.1:41477549-41477568 MS.gene09396:CDS 35.0%
TCATCAAGCTTGAACCTAAA+TGG - chr4.1:41476844-41476863 None:intergenic 35.0%
TCATTCTTGATTGTCTAGGT+TGG + chr4.1:41478473-41478492 MS.gene09396:intron 35.0%
TGGCTTTCTATCGATCAAAT+AGG + chr4.1:41478939-41478958 MS.gene09396:CDS 35.0%
TGTTTCAGATGTTTCTTCGA+GGG + chr4.1:41476242-41476261 MS.gene09396:intron 35.0%
TTCAAAAATTGAACCCAGGA+TGG + chr4.1:41477548-41477567 MS.gene09396:CDS 35.0%
TTGTAGAAAGTGGTTAATGG+TGG + chr4.1:41477818-41477837 MS.gene09396:intron 35.0%
TTGTTGAATGATATAGGTGG+TGG + chr4.1:41478704-41478723 MS.gene09396:intron 35.0%
TTGTTTCAGATGTTTCTTCG+AGG + chr4.1:41476241-41476260 MS.gene09396:intron 35.0%
! AACAACACGTGATAATGAGT+TGG - chr4.1:41479883-41479902 None:intergenic 35.0%
! AGTAATTTTGCCTGATTCCA+AGG + chr4.1:41478165-41478184 MS.gene09396:CDS 35.0%
! CATCTGAAACAAAGTATCAC+TGG - chr4.1:41476233-41476252 None:intergenic 35.0%
! GATTTTCAACAGAGATCCTT+TGG + chr4.1:41478027-41478046 MS.gene09396:intron 35.0%
! GTAATTTTGCCTGATTCCAA+GGG + chr4.1:41478166-41478185 MS.gene09396:CDS 35.0%
! GTATGTTCTAGTTGCTCAAT+TGG + chr4.1:41479797-41479816 MS.gene09396:intron 35.0%
! GTCCTTGACATTTTCCATTA+CGG - chr4.1:41480298-41480317 None:intergenic 35.0%
! TAATTTTGCCTGATTCCAAG+GGG + chr4.1:41478167-41478186 MS.gene09396:CDS 35.0%
! TCAGGTTTTGCTTTATGAGA+TGG + chr4.1:41479112-41479131 MS.gene09396:CDS 35.0%
! TGCTTGTTGAATGATATAGG+TGG + chr4.1:41478701-41478720 MS.gene09396:intron 35.0%
! TTCTTTTCAACCTCAGAACT+CGG - chr4.1:41474448-41474467 None:intergenic 35.0%
! TTGACATTTTCCATTACGGA+GGG - chr4.1:41480294-41480313 None:intergenic 35.0%
! TTGTGCATAGTGGAATGATA+AGG + chr4.1:41478841-41478860 MS.gene09396:CDS 35.0%
! TTTTGTGCTTGTGAAGCATA+TGG + chr4.1:41477655-41477674 MS.gene09396:intron 35.0%
!! ACCATTTTTGTGATCCCTTT+GGG + chr4.1:41476680-41476699 MS.gene09396:intron 35.0%
!! ATGTGTTACGGATTTTGAGA+TGG + chr4.1:41475160-41475179 MS.gene09396:intron 35.0%
!! CACGTGTTGTTTGATGAAAA+TGG + chr4.1:41479892-41479911 MS.gene09396:CDS 35.0%
!! TACCATTTTTGTGATCCCTT+TGG + chr4.1:41476679-41476698 MS.gene09396:intron 35.0%
!! TCATTTTTCTCTCCCAGTTT+GGG + chr4.1:41476046-41476065 MS.gene09396:CDS 35.0%
!! TGTGTTTTGGATTTTTGAGC+CGG + chr4.1:41475015-41475034 MS.gene09396:intron 35.0%
!!! CTTTTCAGGTATACTGTTTC+AGG + chr4.1:41476019-41476038 MS.gene09396:intron 35.0%
AAAGCTGAGTAAGCAGTATC+TGG + chr4.1:41478347-41478366 MS.gene09396:CDS 40.0%
AAATTCCCTTGGATGGCAAA+TGG - chr4.1:41479709-41479728 None:intergenic 40.0%
AACTCCGCACAAAATTGAGT+TGG - chr4.1:41477887-41477906 None:intergenic 40.0%
AAGCTTACTGCAGCTATTGA+AGG - chr4.1:41478617-41478636 None:intergenic 40.0%
AAGGTTACTGATCTGTTTGG+GGG + chr4.1:41476746-41476765 MS.gene09396:intron 40.0%
AATAGGTGTGCATAGTAAGC+TGG - chr4.1:41480174-41480193 None:intergenic 40.0%
AATTTCTTCCCGAGAAGACT+GGG - chr4.1:41478778-41478797 None:intergenic 40.0%
ACAGTTGCAGTCTATCTTTC+GGG - chr4.1:41478141-41478160 None:intergenic 40.0%
ACCACCACAAAAGTAACTCT+TGG - chr4.1:41479502-41479521 None:intergenic 40.0%
ACCTCCATTGGAACAAACAT+AGG - chr4.1:41476970-41476989 None:intergenic 40.0%
ACCTTCGAAGTAAAGGGTAA+AGG - chr4.1:41475602-41475621 None:intergenic 40.0%
ACTCCGCACAAAATTGAGTT+GGG - chr4.1:41477886-41477905 None:intergenic 40.0%
AGAACATCAACAGACACAGA+CGG - chr4.1:41477013-41477032 None:intergenic 40.0%
AGCTCTTGATATTGCTTTGC+GGG + chr4.1:41475900-41475919 MS.gene09396:CDS 40.0%
ATAAGGAGTTACAAGGTGAC+CGG + chr4.1:41476593-41476612 MS.gene09396:CDS 40.0%
ATATTCCATTGACCCATCCT+GGG - chr4.1:41477564-41477583 None:intergenic 40.0%
ATCAGAGATGGAGTAAGTGA+AGG + chr4.1:41479080-41479099 MS.gene09396:intron 40.0%
ATCTGGTACAAGATCCAAAC+AGG - chr4.1:41478010-41478029 None:intergenic 40.0%
ATTGCTGCAGAAACATTTGG+TGG - chr4.1:41479265-41479284 None:intergenic 40.0%
CAAATGGAAACAGCACAGAT+TGG - chr4.1:41479830-41479849 None:intergenic 40.0%
CAACGCAGATAAATTCGCAA+GGG + chr4.1:41477346-41477365 MS.gene09396:CDS 40.0%
CAAGATCCAAACAGGTAAAG+AGG - chr4.1:41478002-41478021 None:intergenic 40.0%
CAATTTACTCCAACCCCAAA+GGG - chr4.1:41476697-41476716 None:intergenic 40.0%
CATCTCATGGAGGTAACATA+AGG + chr4.1:41476576-41476595 MS.gene09396:CDS 40.0%
CCACAGAACATAGTGTAACA+TGG + chr4.1:41479288-41479307 MS.gene09396:intron 40.0%
CCAGTTGCAAGTTGTTGATA+AGG + chr4.1:41474591-41474610 MS.gene09396:CDS 40.0%
CCATGTTACACTATGTTCTG+TGG - chr4.1:41479291-41479310 None:intergenic 40.0%
CCTTATCAACAACTTGCAAC+TGG - chr4.1:41474594-41474613 None:intergenic 40.0%
CGAAGTGGAAATATAATGCC+AGG + chr4.1:41479574-41479593 MS.gene09396:CDS 40.0%
CGTGTATGTGAAACAAGACT+AGG + chr4.1:41478288-41478307 MS.gene09396:CDS 40.0%
CTAACCATAAAACTTCCCCT+TGG - chr4.1:41478185-41478204 None:intergenic 40.0%
CTACAAGGAACTTGCATAGT+AGG - chr4.1:41479340-41479359 None:intergenic 40.0%
CTTAGGGTAAGAACATCTCA+TGG + chr4.1:41476563-41476582 MS.gene09396:CDS 40.0%
GATAAATTCGCAAGGGAGTT+TGG + chr4.1:41477353-41477372 MS.gene09396:CDS 40.0%
GATGTCACACACACAACAAT+TGG + chr4.1:41479206-41479225 MS.gene09396:intron 40.0%
GGACTTAGCAAGGAAAGAAA+AGG - chr4.1:41476491-41476510 None:intergenic 40.0%
GGGAGTTTGGTATCAATGTA+AGG + chr4.1:41477366-41477385 MS.gene09396:CDS 40.0%
GGTTAATATGTGTCAAGCCA+AGG + chr4.1:41477907-41477926 MS.gene09396:CDS 40.0%
GTATTACTTGAATCCCAGCA+TGG - chr4.1:41479749-41479768 None:intergenic 40.0%
GTGAAGAGAAAAACCTCCAT+TGG - chr4.1:41476982-41477001 None:intergenic 40.0%
GTTTGGTATCAATGTAAGGG+AGG + chr4.1:41477370-41477389 MS.gene09396:CDS 40.0%
TAAAACTTCCCCTTGGAATC+AGG - chr4.1:41478178-41478197 None:intergenic 40.0%
TAAACCTAGGTATACCATCG+GGG - chr4.1:41477429-41477448 None:intergenic 40.0%
TAAGCAGTATCTGGAGAATG+TGG + chr4.1:41478356-41478375 MS.gene09396:CDS 40.0%
TAATTTCTTCCCGAGAAGAC+TGG - chr4.1:41478779-41478798 None:intergenic 40.0%
TATGCACAATTCCTCTCTGT+GGG - chr4.1:41478830-41478849 None:intergenic 40.0%
TCAACGCAGATAAATTCGCA+AGG + chr4.1:41477345-41477364 MS.gene09396:CDS 40.0%
TCAGAGATGGAGTAAGTGAA+GGG + chr4.1:41479081-41479100 MS.gene09396:intron 40.0%
TCCTTTACCCTTTACTTCGA+AGG + chr4.1:41475598-41475617 MS.gene09396:CDS 40.0%
TGACAACCTCTTTACCTGTT+TGG + chr4.1:41477993-41478012 MS.gene09396:intron 40.0%
TGTACTCGTTCAGTGTCAAT+AGG + chr4.1:41480062-41480081 MS.gene09396:CDS 40.0%
TGTCACACACACAACAATTG+GGG + chr4.1:41479208-41479227 MS.gene09396:intron 40.0%
TTGCTGCAGAAACATTTGGT+GGG - chr4.1:41479264-41479283 None:intergenic 40.0%
TTTATCTGAACAGCCATGCT+GGG + chr4.1:41479733-41479752 MS.gene09396:CDS 40.0%
! AACTCAATTTTGTGCGGAGT+TGG + chr4.1:41477886-41477905 MS.gene09396:CDS 40.0%
! ACCAACGATCATATTTGGTG+CGG + chr4.1:41478556-41478575 MS.gene09396:CDS 40.0%
! AGCTTGATGACCAAGTAACT+CGG + chr4.1:41476854-41476873 MS.gene09396:CDS 40.0%
! ATTTTTCTCTCCCAGTTTGG+GGG + chr4.1:41476048-41476067 MS.gene09396:CDS 40.0%
! CATTTTTCTCTCCCAGTTTG+GGG + chr4.1:41476047-41476066 MS.gene09396:CDS 40.0%
! CTCCGTAATGGAAAATGTCA+AGG + chr4.1:41480293-41480312 MS.gene09396:CDS 40.0%
! CTTGACATTTTCCATTACGG+AGG - chr4.1:41480295-41480314 None:intergenic 40.0%
! GAAAGTGGTTAATGGTGGAA+CGG + chr4.1:41477823-41477842 MS.gene09396:intron 40.0%
! GAACCCAACTCAATTTTGTG+CGG + chr4.1:41477880-41477899 MS.gene09396:CDS 40.0%
! GATTCCAAGGGGAAGTTTTA+TGG + chr4.1:41478178-41478197 MS.gene09396:CDS 40.0%
! TTCTTGATTGTCTAGGTTGG+TGG + chr4.1:41478476-41478495 MS.gene09396:intron 40.0%
! TTGTTTTCAAAGGGCCATAG+CGG + chr4.1:41479181-41479200 MS.gene09396:intron 40.0%
! TTTTATCTGAACAGCCATGC+TGG + chr4.1:41479732-41479751 MS.gene09396:CDS 40.0%
!! AATTTTCAGGGAGTCACTTC+TGG + chr4.1:41478919-41478938 MS.gene09396:intron 40.0%
!! CCATTTTTGTGATCCCTTTG+GGG + chr4.1:41476681-41476700 MS.gene09396:intron 40.0%
!! TAGCTTTGTCAAATTGAGCC+TGG + chr4.1:41477090-41477109 MS.gene09396:intron 40.0%
!! TTATTTCTGCCCAGTCTTCT+CGG + chr4.1:41478766-41478785 MS.gene09396:CDS 40.0%
!! TTCTGATTCTGGTTCTGCAA+CGG + chr4.1:41480233-41480252 MS.gene09396:CDS 40.0%
!! TTTGAATTTGCTGGGGCTAT+AGG - chr4.1:41478055-41478074 None:intergenic 40.0%
!!! GGAAACACTCTTGCTGTTTT+TGG + chr4.1:41479309-41479328 MS.gene09396:intron 40.0%
!!! GTCATTTTTCTCTCCCAGTT+TGG + chr4.1:41476045-41476064 MS.gene09396:CDS 40.0%
!!! TCTGCCAAGAGTTACTTTTG+TGG + chr4.1:41479495-41479514 MS.gene09396:CDS 40.0%
!!! TTTTCAGGTATCATTTGCGC+CGG + chr4.1:41475454-41475473 MS.gene09396:intron 40.0%
AAACCTAGGTATACCATCGG+GGG - chr4.1:41477428-41477447 None:intergenic 45.0%
AAAGCGTGAACGCGAGTTTA+AGG + chr4.1:41475786-41475805 MS.gene09396:CDS 45.0%
AACGATCAGACAGATCGAAG+TGG + chr4.1:41479559-41479578 MS.gene09396:CDS 45.0%
AAGTGAAGGGCAGTTTAGTC+AGG + chr4.1:41479094-41479113 MS.gene09396:CDS 45.0%
AATCGCATTCCTGCCTATGA+TGG + chr4.1:41475551-41475570 MS.gene09396:CDS 45.0%
ACACATCCATTTGCCATCCA+AGG + chr4.1:41479700-41479719 MS.gene09396:CDS 45.0%
ACACGATCTTGATCAGACAG+TGG - chr4.1:41476333-41476352 None:intergenic 45.0%
ACGGATGACTGTGAAATTGC+CGG - chr4.1:41474217-41474236 None:intergenic 45.0%
AGAAAGCCTTGAGAGGTCTT+AGG + chr4.1:41476546-41476565 MS.gene09396:CDS 45.0%
AGCTGGAGGAACTGCATAAA+AGG - chr4.1:41480157-41480176 None:intergenic 45.0%
AGGAAGAGTCTGTTTACTGC+TGG + chr4.1:41475575-41475594 MS.gene09396:CDS 45.0%
AGGGTAAGAACATCTCATGG+AGG + chr4.1:41476566-41476585 MS.gene09396:CDS 45.0%
ATCGCATTCCTGCCTATGAT+GGG + chr4.1:41475552-41475571 MS.gene09396:CDS 45.0%
ATCTGTCTGATCGTTACTGG+TGG - chr4.1:41479554-41479573 None:intergenic 45.0%
ATGGGATTGTCCCTCAACAT+TGG + chr4.1:41476139-41476158 MS.gene09396:CDS 45.0%
ATTGGGGTAGAAGGACTCTA+CGG + chr4.1:41479224-41479243 MS.gene09396:intron 45.0%
CAAATAGGTGTAAGCCTGAC+AGG + chr4.1:41478954-41478973 MS.gene09396:CDS 45.0%
CACACAACAATTGGGGTAGA+AGG + chr4.1:41479215-41479234 MS.gene09396:intron 45.0%
CACATCCATTTGCCATCCAA+GGG + chr4.1:41479701-41479720 MS.gene09396:CDS 45.0%
CAGAGAGGAATTGTGCATAG+TGG + chr4.1:41478831-41478850 MS.gene09396:CDS 45.0%
CAGATCAAGAAAGCCTTGAG+AGG + chr4.1:41476539-41476558 MS.gene09396:intron 45.0%
CATATTCCATTGACCCATCC+TGG - chr4.1:41477565-41477584 None:intergenic 45.0%
CATCATGCAATACCGTGTTG+CGG - chr4.1:41478502-41478521 None:intergenic 45.0%
CCCCAAAGGGATCACAAAAA+TGG - chr4.1:41476684-41476703 None:intergenic 45.0%
CCTCAAGTCACAAACTACAG+GGG + chr4.1:41478741-41478760 MS.gene09396:CDS 45.0%
CTATGCACAATTCCTCTCTG+TGG - chr4.1:41478831-41478850 None:intergenic 45.0%
GAAAGCCTTGAGAGGTCTTA+GGG + chr4.1:41476547-41476566 MS.gene09396:CDS 45.0%
GACGGAGAAACTGTGTAAGA+TGG - chr4.1:41475846-41475865 None:intergenic 45.0%
GAGAACAAAGGATCCTCTTC+TGG + chr4.1:41475644-41475663 MS.gene09396:CDS 45.0%
GAGGCCTATGTTTGTTCCAA+TGG + chr4.1:41476963-41476982 MS.gene09396:CDS 45.0%
GCAATTTACTCCAACCCCAA+AGG - chr4.1:41476698-41476717 None:intergenic 45.0%
GCCTATGTTTGTTCCAATGG+AGG + chr4.1:41476966-41476985 MS.gene09396:CDS 45.0%
GCCTCAAGTCACAAACTACA+GGG + chr4.1:41478740-41478759 MS.gene09396:CDS 45.0%
GTCAAATTGAGCCTGGACAA+AGG + chr4.1:41477097-41477116 MS.gene09396:CDS 45.0%
GTCTGATCAAGATCGTGTCA+AGG + chr4.1:41476335-41476354 MS.gene09396:CDS 45.0%
TCAGGTATACTGTTTCAGGG+AGG + chr4.1:41476023-41476042 MS.gene09396:intron 45.0%
TCCGCACCAAATATGATCGT+TGG - chr4.1:41478560-41478579 None:intergenic 45.0%
TCGATCTGTCTGATCGTTAC+TGG - chr4.1:41479557-41479576 None:intergenic 45.0%
TCTGTCTGATCGTTACTGGT+GGG - chr4.1:41479553-41479572 None:intergenic 45.0%
TCTTACCCTAAGACCTCTCA+AGG - chr4.1:41476555-41476574 None:intergenic 45.0%
TGAGATGGATGCGATTCGAA+AGG + chr4.1:41479127-41479146 MS.gene09396:CDS 45.0%
TGCTCACGTTAGATCTCTGA+GGG - chr4.1:41476633-41476652 None:intergenic 45.0%
TGGATGCGATTCGAAAGGTA+TGG + chr4.1:41479132-41479151 MS.gene09396:intron 45.0%
TGGTAGATTGTGAAGCAGCA+CGG + chr4.1:41477320-41477339 MS.gene09396:intron 45.0%
TGTAAGGGAGGAACTTGCAT+TGG + chr4.1:41477382-41477401 MS.gene09396:CDS 45.0%
TTGCTCACGTTAGATCTCTG+AGG - chr4.1:41476634-41476653 None:intergenic 45.0%
! ATTTTCCATTACGGAGGGCA+GGG - chr4.1:41480289-41480308 None:intergenic 45.0%
! CTCAGCTTTGCTGCTTGATT+TGG - chr4.1:41478336-41478355 None:intergenic 45.0%
! GCTTACGTTAGAGTCGACTT+CGG + chr4.1:41474468-41474487 MS.gene09396:CDS 45.0%
! TATTTCTGCCCAGTCTTCTC+GGG + chr4.1:41478767-41478786 MS.gene09396:CDS 45.0%
! TCGTGTCAAGGTATCTGTGA+TGG + chr4.1:41476347-41476366 MS.gene09396:intron 45.0%
! TGCTGCAGAAACATTTGGTG+GGG - chr4.1:41479263-41479282 None:intergenic 45.0%
!! ATGGTGGAACGGTGCAATTT+TGG + chr4.1:41477834-41477853 MS.gene09396:CDS 45.0%
!! CTCGGTGCATTTTCACTAAC+TGG - chr4.1:41475517-41475536 None:intergenic 45.0%
!! TCTGATTCTGGTTCTGCAAC+GGG + chr4.1:41480234-41480253 MS.gene09396:CDS 45.0%
!!! CTTTTGGAGTACCTTTGTCC+AGG - chr4.1:41477111-41477130 None:intergenic 45.0%
!!! GCCAAGAGTTACTTTTGTGG+TGG + chr4.1:41479498-41479517 MS.gene09396:CDS 45.0%
!!! TTTTGTGATCCCTTTGGGGT+TGG + chr4.1:41476685-41476704 MS.gene09396:intron 45.0%
AAGTCTTAGGCCTACGCAGA+TGG + chr4.1:41476120-41476139 MS.gene09396:CDS 50.0%
ACAACAGAACACCCACAGAG+AGG + chr4.1:41478816-41478835 MS.gene09396:CDS 50.0%
ACTTCAGTAGAAACCGTCGC+CGG - chr4.1:41474424-41474443 None:intergenic 50.0%
AGCGAGCTCGGAATGCTAAT+AGG - chr4.1:41480191-41480210 None:intergenic 50.0%
AGGAATGCGATTCCCAAGCA+TGG - chr4.1:41475543-41475562 None:intergenic 50.0%
AGGTGTGCATAGTAAGCTGG+AGG - chr4.1:41480171-41480190 None:intergenic 50.0%
AGTCTTAGGCCTACGCAGAT+GGG + chr4.1:41476121-41476140 MS.gene09396:CDS 50.0%
CAGACTCTTCCTCCCATCAT+AGG - chr4.1:41475567-41475586 None:intergenic 50.0%
CATTCAGGTAGTAGCGAGCT+CGG - chr4.1:41480203-41480222 None:intergenic 50.0%
CGTTACTGGTGGGAAAGAGA+CGG - chr4.1:41479543-41479562 None:intergenic 50.0%
CTGGTTTCGGTCGATTAGGA+AGG + chr4.1:41474542-41474561 MS.gene09396:CDS 50.0%
CTTCCTAATCGACCGAAACC+AGG - chr4.1:41474544-41474563 None:intergenic 50.0%
GAAGGAGACGAATCTTCTCC+TGG - chr4.1:41478599-41478618 None:intergenic 50.0%
GACAATCTAGCTGCAAGCGA+CGG - chr4.1:41475864-41475883 None:intergenic 50.0%
GACTGTGAAATTGCCGGAGA+AGG - chr4.1:41474211-41474230 None:intergenic 50.0%
GATGTAACACATCCTCAGCC+AGG + chr4.1:41478578-41478597 MS.gene09396:CDS 50.0%
GATTCCCAAGCATGGACTCT+CGG - chr4.1:41475535-41475554 None:intergenic 50.0%
GCTCACGTTAGATCTCTGAG+GGG - chr4.1:41476632-41476651 None:intergenic 50.0%
GGCCTCAAGTCACAAACTAC+AGG + chr4.1:41478739-41478758 MS.gene09396:CDS 50.0%
GTTACTGGTGGGAAAGAGAC+GGG - chr4.1:41479542-41479561 None:intergenic 50.0%
TGTGACTTGAGGCCAATCCA+TGG - chr4.1:41478733-41478752 None:intergenic 50.0%
TTCCCGAATCGACCTGGTTT+CGG + chr4.1:41474529-41474548 MS.gene09396:CDS 50.0%
TTGAACCCAGGATGGGTCAA+TGG + chr4.1:41477556-41477575 MS.gene09396:CDS 50.0%
TTGGGGTAGAAGGACTCTAC+GGG + chr4.1:41479225-41479244 MS.gene09396:intron 50.0%
! CATTTTCCATTACGGAGGGC+AGG - chr4.1:41480290-41480309 None:intergenic 50.0%
! CCCCTGTAGTTTGTGACTTG+AGG - chr4.1:41478744-41478763 None:intergenic 50.0%
! GACGGGTGTGATGTCTCTTT+TGG - chr4.1:41479525-41479544 None:intergenic 50.0%
! GATATAGGTGGTGGCATCCA+TGG + chr4.1:41478713-41478732 MS.gene09396:intron 50.0%
! GTTGATGAAGCAGCGGTTAC+CGG - chr4.1:41474340-41474359 None:intergenic 50.0%
! TACGTTAGAGTCGACTTCGG+CGG + chr4.1:41474471-41474490 MS.gene09396:CDS 50.0%
! TTGCCGGAGAAGGTTGATTC+CGG - chr4.1:41474201-41474220 None:intergenic 50.0%
! TTGGCATGAGAAGAGCATGC+AGG - chr4.1:41479623-41479642 None:intergenic 50.0%
!! GTGCTGCTTCACAATCTACC+AGG - chr4.1:41477321-41477340 None:intergenic 50.0%
!! TACTGAAGTGCCGAGTTCTG+AGG + chr4.1:41474435-41474454 MS.gene09396:CDS 50.0%
!! TCCTGATCCTGGAGCATTGA+CGG - chr4.1:41474236-41474255 None:intergenic 50.0%
AATGCTCCAGGATCAGGACG+TGG + chr4.1:41474238-41474257 MS.gene09396:CDS 55.0%
AGGGACAATCCCATCTGCGT+AGG - chr4.1:41476133-41476152 None:intergenic 55.0%
ATGCACCGAGAGTCCATGCT+TGG + chr4.1:41475527-41475546 MS.gene09396:CDS 55.0%
CAGTCATCCGTCAATGCTCC+AGG + chr4.1:41474226-41474245 MS.gene09396:CDS 55.0%
CGACCGAAACCAGGTCGATT+CGG - chr4.1:41474535-41474554 None:intergenic 55.0%
CGACCTGGTTTCGGTCGATT+AGG + chr4.1:41474538-41474557 MS.gene09396:CDS 55.0%
CTAACAATCCCGATCCTCGC+CGG + chr4.1:41474179-41474198 MS.gene09396:CDS 55.0%
CTCTTCCTCCCATCATAGGC+AGG - chr4.1:41475563-41475582 None:intergenic 55.0%
CTTCTTCCTGCTCTCCAAGC+TGG + chr4.1:41476931-41476950 MS.gene09396:CDS 55.0%
GAACTCGAACCAGCGACAAC+CGG - chr4.1:41474370-41474389 None:intergenic 55.0%
GACGAATCTTCTCCTGGCTG+AGG - chr4.1:41478593-41478612 None:intergenic 55.0%
GCTGACAGGTGGCCCTTAAA+AGG - chr4.1:41477158-41477177 None:intergenic 55.0%
GCTGGGGCTATAGGTACCAA+AGG - chr4.1:41478046-41478065 None:intergenic 55.0%
GCTTGGAGAGCAGGAAGAAG+TGG - chr4.1:41476931-41476950 None:intergenic 55.0%
GTGTGTGACATCAGCCGCTA+TGG - chr4.1:41479198-41479217 None:intergenic 55.0%
TCACGCGTCAGAACCAGAAG+AGG - chr4.1:41475660-41475679 None:intergenic 55.0%
TCACTTCCAGCTTGGAGAGC+AGG - chr4.1:41476940-41476959 None:intergenic 55.0%
TCCAAGCTGGAAGTGACACG+AGG + chr4.1:41476944-41476963 MS.gene09396:CDS 55.0%
TCCGTCAATGCTCCAGGATC+AGG + chr4.1:41474232-41474251 MS.gene09396:CDS 55.0%
TCGCCGGAATCAACCTTCTC+CGG + chr4.1:41474195-41474214 MS.gene09396:CDS 55.0%
TCTCTGATGAGGACGCTGAC+AGG - chr4.1:41477172-41477191 None:intergenic 55.0%
TGCACCGAGAGTCCATGCTT+GGG + chr4.1:41475528-41475547 MS.gene09396:CDS 55.0%
TGCTTCATCAACCGCAGCTC+CGG + chr4.1:41474348-41474367 MS.gene09396:CDS 55.0%
TTCAGCACCGTCGTCTCAGA+AGG + chr4.1:41474498-41474517 MS.gene09396:CDS 55.0%
! AGGTGGTGGCATCCATGGAT+TGG + chr4.1:41478718-41478737 MS.gene09396:intron 55.0%
! AGGTTGATTCCGGCGAGGAT+CGG - chr4.1:41474191-41474210 None:intergenic 55.0%
! GACCGAAACCAGGTCGATTC+GGG - chr4.1:41474534-41474553 None:intergenic 55.0%
! GCATTCCTGCCTATGATGGG+AGG + chr4.1:41475555-41475574 MS.gene09396:CDS 55.0%
!! AGCTGCGGTTGATGAAGCAG+CGG - chr4.1:41474347-41474366 None:intergenic 55.0%
!! GGTGGGACCGAGTATTGGAA+AGG + chr4.1:41476088-41476107 MS.gene09396:CDS 55.0%
!!! GAGGGGCTCTTTTGAGACAC+CGG - chr4.1:41476615-41476634 None:intergenic 55.0%
ACCGGAGCAGGAACGAACGA+CGG - chr4.1:41474316-41474335 None:intergenic 60.0%
AGCACCGTCGTCTCAGAAGG+CGG + chr4.1:41474501-41474520 MS.gene09396:CDS 60.0%
CATCGGGGGAGGCAAAACAC+GGG - chr4.1:41477414-41477433 None:intergenic 60.0%
CCATCGGGGGAGGCAAAACA+CGG - chr4.1:41477415-41477434 None:intergenic 60.0%
CCTAGGTATACCATCGGGGG+AGG - chr4.1:41477425-41477444 None:intergenic 60.0%
CCTCCCCCGATGGTATACCT+AGG + chr4.1:41477422-41477441 MS.gene09396:intron 60.0%
CTGATGAGGACGCTGACAGG+TGG - chr4.1:41477169-41477188 None:intergenic 60.0%
GAAGCAGCGGTTACCGGAAC+CGG - chr4.1:41474334-41474353 None:intergenic 60.0%
GCAGGAACGAACGACGGAGA+TGG - chr4.1:41474310-41474329 None:intergenic 60.0%
GGGCAGGGTCGACACAAAGT+TGG - chr4.1:41480274-41480293 None:intergenic 60.0%
GTTCGTTCCTGCTCCGGTTC+CGG + chr4.1:41474318-41474337 MS.gene09396:CDS 60.0%
TCCGTCGTTCGTTCCTGCTC+CGG + chr4.1:41474312-41474331 MS.gene09396:CDS 60.0%
TTGGCGGTGGGACCGAGTAT+TGG + chr4.1:41476083-41476102 MS.gene09396:CDS 60.0%
! GGAGAAGGTTGATTCCGGCG+AGG - chr4.1:41474196-41474215 None:intergenic 60.0%
! GGTTGATTCCGGCGAGGATC+GGG - chr4.1:41474190-41474209 None:intergenic 60.0%
! GTTAGAGTCGACTTCGGCGG+CGG + chr4.1:41474474-41474493 MS.gene09396:CDS 60.0%
! TCTCCCAGTTTGGGGGCACA+GGG + chr4.1:41476055-41476074 MS.gene09396:CDS 60.0%
!! CTAGGTTGGTGGCCGCAACA+CGG + chr4.1:41478487-41478506 MS.gene09396:intron 60.0%
!! GCCTCGTGTCACTTCCAGCT+TGG - chr4.1:41476948-41476967 None:intergenic 60.0%
ACCAGCGACAACCGGAGCTG+CGG - chr4.1:41474362-41474381 None:intergenic 65.0%
GCGAGGTTCCCGAATCGACC+TGG + chr4.1:41474523-41474542 MS.gene09396:CDS 65.0%
GCTCCAGGATCAGGACGTGG+CGG + chr4.1:41474241-41474260 MS.gene09396:CDS 65.0%
GTCGACCCTGCCCTCCGTAA+TGG + chr4.1:41480281-41480300 MS.gene09396:CDS 65.0%
TACTCGGTCCCACCGCCAAG+AGG - chr4.1:41476082-41476101 None:intergenic 65.0%
TCAGGACGTGGCGGTCGTTC+CGG + chr4.1:41474250-41474269 MS.gene09396:CDS 65.0%
TGCTCCAACGCGTCCGTCTC+CGG + chr4.1:41474390-41474409 MS.gene09396:CDS 65.0%
! CCGTGTTTTGCCTCCCCCGA+TGG + chr4.1:41477412-41477431 MS.gene09396:CDS 65.0%
! CTCCCAGTTTGGGGGCACAG+GGG + chr4.1:41476056-41476075 MS.gene09396:CDS 65.0%
! CTCTCCCAGTTTGGGGGCAC+AGG + chr4.1:41476054-41476073 MS.gene09396:CDS 65.0%
!! CTCGCCGCCTTCTGAGACGA+CGG - chr4.1:41474508-41474527 None:intergenic 65.0%
AACGCGTCCGTCTCCGGCTC+TGG + chr4.1:41474396-41474415 MS.gene09396:CDS 70.0%
ACCGCAGCTCCGGTTGTCGC+TGG + chr4.1:41474358-41474377 MS.gene09396:CDS 70.0%
AGAGCCGGAGACGGACGCGT+TGG - chr4.1:41474397-41474416 None:intergenic 70.0%
AGGCCCCTGTGCCCCCAAAC+TGG - chr4.1:41476062-41476081 None:intergenic 70.0%
CACAGGGGCCTCTTGGCGGT+GGG + chr4.1:41476071-41476090 MS.gene09396:CDS 70.0%
CGACCGCCACGTCCTGATCC+TGG - chr4.1:41474247-41474266 None:intergenic 70.0%
CGTCGTCTCAGAAGGCGGCG+AGG + chr4.1:41474506-41474525 MS.gene09396:CDS 70.0%
GCGGTTACCGGAACCGGAGC+AGG - chr4.1:41474328-41474347 None:intergenic 70.0%
GCGTGAACCACGACCACCGC+CGG - chr4.1:41474272-41474291 None:intergenic 70.0%
GGCCCCTGTGCCCCCAAACT+GGG - chr4.1:41476061-41476080 None:intergenic 70.0%
GGCGGTGGTCGTGGTTCACG+CGG + chr4.1:41474271-41474290 MS.gene09396:CDS 70.0%
GGTGGTCGTGGTTCACGCGG+CGG + chr4.1:41474274-41474293 MS.gene09396:CDS 70.0%
! TCCGTCTCCGGCTCTGGCTC+CGG + chr4.1:41474402-41474421 MS.gene09396:CDS 70.0%
! TTGGGGGCACAGGGGCCTCT+TGG + chr4.1:41476064-41476083 MS.gene09396:CDS 70.0%
ACCGTCGCCGGAGCCAGAGC+CGG - chr4.1:41474412-41474431 None:intergenic 75.0%
GCACAGGGGCCTCTTGGCGG+TGG + chr4.1:41476070-41476089 MS.gene09396:CDS 75.0%
GCCGGAGCCAGAGCCGGAGA+CGG - chr4.1:41474406-41474425 None:intergenic 75.0%
GGACGTGGCGGTCGTTCCGG+CGG + chr4.1:41474253-41474272 MS.gene09396:CDS 75.0%
GGGGCACAGGGGCCTCTTGG+CGG + chr4.1:41476067-41476086 MS.gene09396:CDS 75.0%
GGTCGTTCCGGCGGTGGTCG+TGG + chr4.1:41474262-41474281 MS.gene09396:CDS 75.0%
! TCCGGCTCTGGCTCCGGCGA+CGG + chr4.1:41474408-41474427 MS.gene09396:CDS 75.0%
! CGTGGCGGTCGTTCCGGCGG+TGG + chr4.1:41474256-41474275 MS.gene09396:CDS 80.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 41474160 41480335 41474160 ID=MS.gene09396
chr4.1 mRNA 41474160 41480335 41474160 ID=MS.gene09396.t1;Parent=MS.gene09396
chr4.1 exon 41474160 41474630 41474160 ID=MS.gene09396.t1.exon1;Parent=MS.gene09396.t1
chr4.1 CDS 41474160 41474630 41474160 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41475461 41475675 41475461 ID=MS.gene09396.t1.exon2;Parent=MS.gene09396.t1
chr4.1 CDS 41475461 41475675 41475461 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41475783 41475938 41475783 ID=MS.gene09396.t1.exon3;Parent=MS.gene09396.t1
chr4.1 CDS 41475783 41475938 41475783 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41476027 41476160 41476027 ID=MS.gene09396.t1.exon4;Parent=MS.gene09396.t1
chr4.1 CDS 41476027 41476160 41476027 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41476250 41476356 41476250 ID=MS.gene09396.t1.exon5;Parent=MS.gene09396.t1
chr4.1 CDS 41476250 41476356 41476250 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41476542 41476645 41476542 ID=MS.gene09396.t1.exon6;Parent=MS.gene09396.t1
chr4.1 CDS 41476542 41476645 41476542 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41476849 41476987 41476849 ID=MS.gene09396.t1.exon7;Parent=MS.gene09396.t1
chr4.1 CDS 41476849 41476987 41476849 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41477093 41477209 41477093 ID=MS.gene09396.t1.exon8;Parent=MS.gene09396.t1
chr4.1 CDS 41477093 41477209 41477093 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41477326 41477433 41477326 ID=MS.gene09396.t1.exon9;Parent=MS.gene09396.t1
chr4.1 CDS 41477326 41477433 41477326 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41477522 41477593 41477522 ID=MS.gene09396.t1.exon10;Parent=MS.gene09396.t1
chr4.1 CDS 41477522 41477593 41477522 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41477824 41477934 41477824 ID=MS.gene09396.t1.exon11;Parent=MS.gene09396.t1
chr4.1 CDS 41477824 41477934 41477824 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41478028 41478199 41478028 ID=MS.gene09396.t1.exon12;Parent=MS.gene09396.t1
chr4.1 CDS 41478028 41478199 41478028 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41478277 41478398 41478277 ID=MS.gene09396.t1.exon13;Parent=MS.gene09396.t1
chr4.1 CDS 41478277 41478398 41478277 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41478491 41478628 41478491 ID=MS.gene09396.t1.exon14;Parent=MS.gene09396.t1
chr4.1 CDS 41478491 41478628 41478491 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41478720 41478862 41478720 ID=MS.gene09396.t1.exon15;Parent=MS.gene09396.t1
chr4.1 CDS 41478720 41478862 41478720 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41478928 41478990 41478928 ID=MS.gene09396.t1.exon16;Parent=MS.gene09396.t1
chr4.1 CDS 41478928 41478990 41478928 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41479085 41479148 41479085 ID=MS.gene09396.t1.exon17;Parent=MS.gene09396.t1
chr4.1 CDS 41479085 41479148 41479085 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41479469 41479595 41479469 ID=MS.gene09396.t1.exon18;Parent=MS.gene09396.t1
chr4.1 CDS 41479469 41479595 41479469 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41479688 41479761 41479688 ID=MS.gene09396.t1.exon19;Parent=MS.gene09396.t1
chr4.1 CDS 41479688 41479761 41479688 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41479868 41479962 41479868 ID=MS.gene09396.t1.exon20;Parent=MS.gene09396.t1
chr4.1 CDS 41479868 41479962 41479868 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41480052 41480083 41480052 ID=MS.gene09396.t1.exon21;Parent=MS.gene09396.t1
chr4.1 CDS 41480052 41480083 41480052 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
chr4.1 exon 41480166 41480335 41480166 ID=MS.gene09396.t1.exon22;Parent=MS.gene09396.t1
chr4.1 CDS 41480166 41480335 41480166 ID=cds.MS.gene09396.t1;Parent=MS.gene09396.t1
Gene Sequence

>MS.gene09396

ATGTCTCGTCGCGGTGGCGCTAACAATCCCGATCCTCGCCGGAATCAACCTTCTCCGGCAATTTCACAGTCATCCGTCAATGCTCCAGGATCAGGACGTGGCGGTCGTTCCGGCGGTGGTCGTGGTTCACGCGGCGGACACACTGTTCCATCTCCGTCGTTCGTTCCTGCTCCGGTTCCGGTAACCGCTGCTTCATCAACCGCAGCTCCGGTTGTCGCTGGTTCGAGTTCTGCTCCAACGCGTCCGTCTCCGGCTCTGGCTCCGGCGACGGTTTCTACTGAAGTGCCGAGTTCTGAGGTTGAAAAGAAGCTTACGTTAGAGTCGACTTCGGCGGCGGCTTCAGCACCGTCGTCTCAGAAGGCGGCGAGGTTCCCGAATCGACCTGGTTTCGGTCGATTAGGAAGGAAGATTCAAGTTCGTGCTAATCATTTCCAGTTGCAAGTTGTTGATAAGGATCTTCATCACTACGATGTTAGTATATTATTTTTCTCATACGTTTTTTTTTTTGTTGAATCACATTTTAAGTGTTTAAGTTTTTGTTTTTGTTTATTATGTTGAATTTTAACAATGTGTTATGTATTTTCAGACACCGATTTTTTTTTCTTGATTACGTTCATTTTTTTTTTTTGGTAATAAAATTTGATTATTCTCATACTTTTTGTTTGTACTCAAATTTGAAGTGTTTATGTTGTAGGTTTTGTTTATTACGTTAATTTCAAACATATTGTTTTAGGTTTAGTTTAGTATGTTTGATTTGAAACATGTTTTAGGTTTTGTGTTATTATGTTGATCTGAAACATGTTTTAGGTTTTGTTTATCATGTTGATTTGGAACAGTAAAACAAATCAGTTACATTGTGTTTTGGATTTTTGAGCCGGTAAATTTTGATTACGCTCATCTCATGTAATTTTTTTTTTTTTTGAACTCAAATTTTTATTGTTCAGGTTACTTGTTTTTGTTTTGTTTTGATGATTTGAAACTATAATGCTGGTAAGTTACTATGTGTTACGGATTTTGAGATGGAAATTTTTATAATGTTTGTGCATTTTTTATACTCAAATTTGAAGTGTTCAGGTTTGTTGTTGTTGATGTTGATTTGGAAAATGAAGCTAGTAAGTAACACTGTGTCATGGAAGTTCAGAGACTGAAAATTTTGATTTAGCTGATGTATTATTTTTAACTCAAATTAAAAGTGTTCAGGTTTTGTTTCTGTTTGTTATGTTAATTTGAAACAATAATGCTAGTAAGTTAACAATGTGTTATGGTTAAGAGAGGCTGAAAATTTTGGTTATTGTTTTCAGGTATCATTTGCGCCGGACATTACTTCAAAGAAAGTGTCAAGGGATGTTATCAACCAGTTAGTGAAAATGCACCGAGAGTCCATGCTTGGGAATCGCATTCCTGCCTATGATGGGAGGAAGAGTCTGTTTACTGCTGGTCCTTTACCCTTTACTTCGAAGGTTTTTGTGATTAAATTGGTTGATGAGAACAAAGGATCCTCTTCTGGTTCTGACGCGTGAGTTTGTTGAAAATGTGTTAATTATAAGAATTTGTTGTTAACATGGCTACTACTTTTGATGTATTTTATGAATTGCTGATTGCTGATTTTATCTTTTGTCACAGGAAAAAGCGTGAACGCGAGTTTAAGGTTACAATTAAGTTTGCTTCACAGACGGACCTTAACCATCTTACACAGTTTCTCCGTCGCTTGCAGCTAGATTGTCCTTATGAAACCATACAAGCTCTTGATATTGCTTTGCGGGCAACTCCATCTGAAATGTAGCAATATTGTTTTTTGTGTTCTTTATTTGGTTTTGCTGATTTTGTGGTAAGTGATCATGTTTGTAATCGATAAACTGCTTTTCAGGTATACTGTTTCAGGGAGGTCATTTTTCTCTCCCAGTTTGGGGGCACAGGGGCCTCTTGGCGGTGGGACCGAGTATTGGAAAGGCTATTATCAAAGTCTTAGGCCTACGCAGATGGGATTGTCCCTCAACATTGGTATTACATCTACACATTACTAATATTTTTCTTGACTATTTTCAATTGAATCTATGTTTCAGACTTTGACCAGTGATACTTTGTTTCAGATGTTTCTTCGAGGGCTTTTTATGAACCAATTCGTGTGACTGACTTTATTTCTAAGAATTTTAAGTTGAATTTTTCAAGGCCACTGTCTGATCAAGATCGTGTCAAGGTATCTGTGATGGATTTTTATTTTTAATATTATGCTATGTTTTTTTATTTAATGAGGTGACAGAAAATGAGCCATGATCTACTTATAATTCGTTTATCATCTAATAATTCCATGCTAAGTCTAGTTTTCTTCCTTTTCTTTCCTTGCTAAGTCCAGTTCTAATACCAGTTTTCTTACTCTGTCAGATCAAGAAAGCCTTGAGAGGTCTTAGGGTAAGAACATCTCATGGAGGTAACATAAGGAGTTACAAGGTGACCGGTGTCTCAAAAGAGCCCCTCAGAGATCTAACGTGAGCAATTTATATTGTTTTTTTTTTTTTTTTTACCATTTTTGTGATCCCTTTGGGGTTGGAGTAAATTGCACGTAATGTGTGATACTTCCAAGTTACAAAGGTTACTGATCTGTTTGGGGGCAAGTTGTATAGTCCATGACTAAGCTTTATTTTTACAACTTTAGGCTTGATTTCACTCTTGTAATTTGTTATCCATTTAGGTTCAAGCTTGATGACCAAGTAACTCGGAAAAAAATTGCTGATTATTTCTATGAGAAATATGAAATTGTGTTACAGTATCCACTTCTTCCTGCTCTCCAAGCTGGAAGTGACACGAGGCCTATGTTTGTTCCAATGGAGGTTTTTCTCTTCACTACTTTCTCCGTCTGTGTCTGTTGATGTTCTGCATATTGTTTTGTGGACATTGTGTTAGACCTAAAATCTGTTGTGATGTATTTGTTATAGCTTTGTCAAATTGAGCCTGGACAAAGGTACTCCAAAAGATTAAACGAAGAGCAAGTAACAAACCTTTTAAGGGCCACCTGTCAGCGTCCTCATCAGAGAGAAAGTGATATTAAAAAGGTATGTTTCATAATATATCAATATATTTTTTTTTTACAGAAGTTATATATTTATACAGGTTGTGTTTGTGTGCATGTTTTTTCCCCCCTCATAATTGACATTTCTTTTCCTGGTAGATTGTGAAGCAGCACGGTTTCAACGCAGATAAATTCGCAAGGGAGTTTGGTATCAATGTAAGGGAGGAACTTGCATTGGTTGATGCCCGTGTTTTGCCTCCCCCGATGGTATACCTAGGTTTATGCTTAATAAAATTTATCTATTTATCTTGTTTTGTGATATTTAATAATATTTAATTTTCTTTTCCAACTGTAGCTCAAATATCATGGAAATGGCGGAGATTCAAAAATTGAACCCAGGATGGGTCAATGGAATATGATTAGACATGTATGATGAATCCTTCTTTTTGTATGAATGCTTTCAAATTATTGTGGTCTTTATACTTTACTTTTGTGCTTGTGAAGCATATGGTCCTCTTGAATTTTATTTAACTTGTGTGTTAGATCTTATGTTAACATGTGAGAATCTAAATTAATATGATTTTAATATTAGATATTAGATTCTTTCCTATGACAATGGTTAAATTGTTGATCAATGTTGACCTTTTTATTTTGTAGAAAGTGGTTAATGGTGGAACGGTGCAATTTTGGAGTTGCCTTAGCTTTTCTAGATTGAACCCAACTCAATTTTGTGCGGAGTTGGTTAATATGTGTCAAGCCAAGGGAATAGTATGTTGTTTGTTTGTACTATTTCATTTAATAATTATTATATGCTTCCCAATAATTTTGACAACCTCTTTACCTGTTTGGATCTTGTACCAGATTTTCAACAGAGATCCTTTGGTACCTATAGCCCCAGCAAATTCAAATCAAATTGAGAAAGAGCTTGAGAAATTAGACAAGAACTGCAAGGCAAAACTTAATAGTACAAACCCGAAAGATAGACTGCAACTGTTGATAGTAATTTTGCCTGATTCCAAGGGGAAGTTTTATGGTTAGTTTTCTATAAAGTCCAAATTAAATTTGAAGGTTTGGTTTTACATAATTGAATTACTTTGTTTTGTTTTGCAGATGAAGTAAAGCGTGTATGTGAAACAAGACTAGGAATTGTGACTCAGTGTGTTAAACCAAATCAAGCAGCAAAGCTGAGTAAGCAGTATCTGGAGAATGTGGCTTTGAAAATTAATGTTAAGGTCCAAGTTATTATCCAATAAATAGTATGCTTGGTTCTATATTTTTATTTGATTGCTTTTAAGTGTTAAATATATCATTCTTGATTGTCTAGGTTGGTGGCCGCAACACGGTATTGCATGATGCTATTGAAAGAAAAATTCCTCTTTTAACTGATAAACCAACGATCATATTTGGTGCGGATGTAACACATCCTCAGCCAGGAGAAGATTCGTCTCCTTCAATAGCTGCAGTAAGCTTTGCCTTTTTGCATAGTTATGTGCAACTTTTTTATGATATATCATATTTAAATAGTTTTATTCTTTGCTTGTTGAATGATATAGGTGGTGGCATCCATGGATTGGCCTCAAGTCACAAACTACAGGGGACTTATTTCTGCCCAGTCTTCTCGGGAAGAAATTATTCAAGATCTGTACAAAACAACAGAACACCCACAGAGAGGAATTGTGCATAGTGGAATGATAAGGTAATGGCGTTAGATTTCTATATTCTTTGTGTTGAGGCAAAGCTGATTTTTCTTTTAATTTTCAGGGAGTCACTTCTGGCTTTCTATCGATCAAATAGGTGTAAGCCTGACAGGATTATATTTTACAGGTTGGACTTGGTTTTAATTGAACGATTAAATAGTTATTTCTATTATGTATATATTTAATATGATTTTTTTACAATATTAATTTGTGATTATCAGAGATGGAGTAAGTGAAGGGCAGTTTAGTCAGGTTTTGCTTTATGAGATGGATGCGATTCGAAAGGTATGGCATTTTTAACTCCATACTTTTGTTGTTTGTTTTCAAAGGGCCATAGCGGCTGATGTCACACACACAACAATTGGGGTAGAAGGACTCTACGGGTTTGAACTTGCTCCCCACCAAATGTTTCTGCAGCAATTAACCACAGAACATAGTGTAACATGGAAACACTCTTGCTGTTTTTGGTTGTACCTACTATGCAAGTTCCTTGTAGATAGAATTAAGCAGTTCTCAATATTTTTCTTGCTTATTTGATTGAATTGTTTCATTTTTTCATAATTACATGAGTTTTATGTATTTTAAACATTTAAATTGGTTCTCAGGCTTGTGTCTCACTAGAGAACAATTATCTGCCAAGAGTTACTTTTGTGGTGGTCCAAAAGAGACATCACACCCGTCTCTTTCCCACCAGTAACGATCAGACAGATCGAAGTGGAAATATAATGCCAGGTTTTTTTTCAATTTTTTTTCTTGCCTGCATGCTCTTCTCATGCCAATTTATCTATATTTACTGATTTGTGTTCATTGAAATTTTGTCAAAGGAACTGTGGTAGACACATCCATTTGCCATCCAAGGGAATTTGATTTTTATCTGAACAGCCATGCTGGGATTCAAGTAATACTTACTAGTTCCATTAACTTTCTATGCCTGTATGTTCTAGTTGCTCAATTGGCATTTAACCAATCTGTGCTGTTTCCATTTGAATGTCTTTGTTTTTCAGGGGACTAGTCGACCAACTCATTATCACGTGTTGTTTGATGAAAATGGCTTCAGTGCTGATCAGTTGCAGAGTTTGACCAATAACTTATGTTACACGTATGAACCTCTTCATTTATTTTTCTACTTTAAACTACTGTTTTCATTTAATTTTAGAAGCCCTCATATTTTCTTTTTTCAATTTTCAGTTATGCAAGGTGTACTCGTTCAGTGTCAATAGGTTTGTCAACTCAATATTCTGTGTGCTTTTTTGTAAGCCATATGAAACATAATTTAACTAAAATGTTGATCCTTTTATGCAGTTCCTCCAGCTTACTATGCACACCTATTAGCATTCCGAGCTCGCTACTACCTGAATGAAGTTGACAATTCTGATTCTGGTTCTGCAACGGGTAACAGAAGTAACACCAACTTTGTGTCGACCCTGCCCTCCGTAATGGAAAATGTCAAGGACGTTATGTTCTACTGTTGA
Protein sequence

>MS.gene09396.t1

MSRRGGANNPDPRRNQPSPAISQSSVNAPGSGRGGRSGGGRGSRGGHTVPSPSFVPAPVPVTAASSTAAPVVAGSSSAPTRPSPALAPATVSTEVPSSEVEKKLTLESTSAAASAPSSQKAARFPNRPGFGRLGRKIQVRANHFQLQVVDKDLHHYDVSFAPDITSKKVSRDVINQLVKMHRESMLGNRIPAYDGRKSLFTAGPLPFTSKVFVIKLVDENKGSSSGSDAKKREREFKVTIKFASQTDLNHLTQFLRRLQLDCPYETIQALDIALRATPSEMYTVSGRSFFSPSLGAQGPLGGGTEYWKGYYQSLRPTQMGLSLNIDVSSRAFYEPIRVTDFISKNFKLNFSRPLSDQDRVKIKKALRGLRVRTSHGGNIRSYKVTGVSKEPLRDLTFKLDDQVTRKKIADYFYEKYEIVLQYPLLPALQAGSDTRPMFVPMELCQIEPGQRYSKRLNEEQVTNLLRATCQRPHQRESDIKKIVKQHGFNADKFAREFGINVREELALVDARVLPPPMLKYHGNGGDSKIEPRMGQWNMIRHKVVNGGTVQFWSCLSFSRLNPTQFCAELVNMCQAKGIIFNRDPLVPIAPANSNQIEKELEKLDKNCKAKLNSTNPKDRLQLLIVILPDSKGKFYDEVKRVCETRLGIVTQCVKPNQAAKLSKQYLENVALKINVKVGGRNTVLHDAIERKIPLLTDKPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPQVTNYRGLISAQSSREEIIQDLYKTTEHPQRGIVHSGMIRESLLAFYRSNRCKPDRIIFYRDGVSEGQFSQVLLYEMDAIRKACVSLENNYLPRVTFVVVQKRHHTRLFPTSNDQTDRSGNIMPGTVVDTSICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENGFSADQLQSLTNNLCYTYARCTRSVSIVPPAYYAHLLAFRARYYLNEVDNSDSGSATGNRSNTNFVSTLPSVMENVKDVMFYC